Cp4.1LG02g02120.1 (mRNA) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG02g02120.1
Type	mRNA
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	protein DOG1-like 4
Location	Cp4.1LG02: 4142181 .. 4143594 (+)
Sequence length	438
RNA-Seq Expression	Cp4.1LG02g02120.1
Synteny	Cp4.1LG02g02120.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGCAGCGGGCTCAACTTCACCAGCTTCTACGCCACCTGGTTCGACCACCTCCGCCACCTCATCCACCAGCTCTCCTCCACCCCCACTGACCACCACCTCGTCCACACCATCATCTCACACTACTCCGAGTACTTCCGGGTCAAGTCCCTCGCCGCCGAGAAAGACCCTCTCTCCGTCTTCTCCGCCCCCTGGGCCACCTCCTTTGAACGCTCCCTTCATTGGGTAGCTGGTTGGCGTCCCACCACTACTTTTCATTTGATTTACTCCCAGTCAACCATTCTCTTTCACTCCCAGATTGCCGATATTCTTCACGCTCNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTCGTCGTCCTCGACGGTCCAAACCACCGATAGCACATATTGTCATCTTTGGGCTTTACTTTTCAAACTTCCCACAAGGCCTAAACATACAGTAAGGTTTACACATCTGTCTAAAGGGTGATTTGTTCACCCAATTCATCTCTTCAAAGCCCAGCATCTCTCATTTCTTTTTCCAATCAATGTGGGTCCGCTACCAAATTCACCCCTTCAAGGCCCAGCGTCTTTACTAGCACACCACCTCGTGTCTACCCTTCAAGGAACAGTCTCCTTGCTGACACATAGTTCGATGTTTGACTCTAATACCATTTGTAATGACCTTGCCCCACAGCTAGTAAATATTGTCTTCTTTGGACTTTCCTTTTCAAGGTTTCCTTCAAGTCATTAAAATGTGTCTACGACATAAAGATCTTCACACCCTTATAAAGGATGTTTCGTTCTCCTCCCCAACCAATGTGAGATATCACATGACATAAAAGAAACTCAGAGCGTAGAATAAATTAACTTAAGGAGTAGAGTTAGTCGAACAAGTATACAATAACTTTACGAGAATTATTTGATTTTACCATAATTGTTAGTAGAAGGAGAATTGTTAATAGATTTAGTAGAATAAATTATTAACTAATATTAACTGAATTGAATGGTGGGTCCGACCAAGTTTAAATTTTGTGGTTGAATTGAAAAGTTACCTTGAAGTTTTTTTTACTTGTTTCAACATATTTCGATCAAGAGTCATATTCGAGGTTTCATGCAGGTGGAGGAGGAGAATGCGATAATGGATGAGCTATCGGAGTGGCAAGACGAGGAGAGCGAGCTGATGCAGAGGAGGGTGGAGGCGTCGGGGAAGGGTGAAGGTCTGGTTAGCATTATAAAGAAAGCGGACGCTCTACGGCTGCGGACACTGCAGAAGGTGGTGGAGCTTCTCACGCCGAAGCAGGCGGTGGAGTTCCTCATCGCCGCCGCCGAGCTCCAGTTTGGTGTTCGGGGGTGGGGGATGAATGAGGACCGTCAACGTGGCAATCATCCAGACACCTAA

mRNA sequence

ATGAGCAGCGGGCTCAACTTCACCAGCTTCTACGCCACCTGGTTCGACCACCTCCGCCACCTCATCCACCAGCTCTCCTCCACCCCCACTGACCACCACCTCGTCCACACCATCATCTCACACTACTCCGAGTACTTCCGGGTCAAGTCCCTCGCCGCCGAGAAAGACCCTCTCTCCGTCTTCTCCGCCCCCTGGGCCACCTCCTTTGAACGCTCCCTTCATTGGAGGAGGGTGGAGGCGTCGGGGAAGGGTGAAGGTCTGGTTAGCATTATAAAGAAAGCGGACGCTCTACGGCTGCGGACACTGCAGAAGGTGGTGGAGCTTCTCACGCCGAAGCAGGCGGTGGAGTTCCTCATCGCCGCCGCCGAGCTCCAGTTTGGTGTTCGGGGGTGGGGGATGAATGAGGACCGTCAACGTGGCAATCATCCAGACACCTAA

Coding sequence (CDS)

ATGAGCAGCGGGCTCAACTTCACCAGCTTCTACGCCACCTGGTTCGACCACCTCCGCCACCTCATCCACCAGCTCTCCTCCACCCCCACTGACCACCACCTCGTCCACACCATCATCTCACACTACTCCGAGTACTTCCGGGTCAAGTCCCTCGCCGCCGAGAAAGACCCTCTCTCCGTCTTCTCCGCCCCCTGGGCCACCTCCTTTGAACGCTCCCTTCATTGGAGGAGGGTGGAGGCGTCGGGGAAGGGTGAAGGTCTGGTTAGCATTATAAAGAAAGCGGACGCTCTACGGCTGCGGACACTGCAGAAGGTGGTGGAGCTTCTCACGCCGAAGCAGGCGGTGGAGTTCCTCATCGCCGCCGCCGAGCTCCAGTTTGGTGTTCGGGGGTGGGGGATGAATGAGGACCGTCAACGTGGCAATCATCCAGACACCTAA

Protein sequence

MSSGLNFTSFYATWFDHLRHLIHQLSSTPTDHHLVHTIISHYSEYFRVKSLAAEKDPLSVFSAPWATSFERSLHWRRVEASGKGEGLVSIIKKADALRLRTLQKVVELLTPKQAVEFLIAAAELQFGVRGWGMNEDRQRGNHPDT

Homology

[Close]

BLAST of Cp4.1LG02g02120.1 vs. ExPASy Swiss-Prot
Match: Q84JC2 (Protein DOG1-like 4 OS=Arabidopsis thaliana OX=3702 GN=DOGL4 PE=1 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 1.7e-06
Identity = 28/57 (49.12%), Postives = 40/57 (70.18%), Query Frame = 0


Query: 78  VEASGKG--EGLVSIIKKADALRLRTLQKVVELLTPKQAVEFLIAAAELQFGVRGWG 133
           VEA+ +G   GL  ++K AD +RL+TL+ ++++LTP Q VEFL AAA  Q  +R WG
Sbjct: 167 VEAAVRGLSMGLEKMVKAADCVRLKTLKGILDILTPPQCVEFLAAAATFQVQLRRWG 223

[Close]

BLAST of Cp4.1LG02g02120.1 vs. ExPASy Swiss-Prot
Match: Q58FV0 (Protein DOG1-like 3 OS=Arabidopsis thaliana OX=3702 GN=DOGL3 PE=2 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 8.6e-06
Identity = 23/55 (41.82%), Postives = 35/55 (63.64%), Query Frame = 0


Query: 85  EGLVSIIKKADALRLRTLQKVVELLTPKQAVEFLIAAAELQFGVRGWGMNEDRQR 140
           EG+  ++ +AD LR  TL+K+V+++TP QA EFL+A   L   +  WG   + QR
Sbjct: 201 EGMAVLMVEADKLRFETLRKIVDVVTPVQAAEFLLAGKRLHISLHEWGRVREEQR 255

[Close]

BLAST of Cp4.1LG02g02120.1 vs. ExPASy Swiss-Prot
Match: Q9SN45 (Protein DOG1-like 2 OS=Arabidopsis thaliana OX=3702 GN=DOGL2 PE=4 SV=2)

HSP 1 Score: 47.8 bits (112), Expect = 1.2e-04
Identity = 22/48 (45.83%), Postives = 33/48 (68.75%), Query Frame = 0


Query: 85  EGLVSIIKKADALRLRTLQKVVELLTPKQAVEFLIAAAELQFGVRGWG 133
           EG+  ++ +AD LR  TL+K+V+++TP QAVEFL+A   LQ  +   G
Sbjct: 193 EGMAVLLAEADKLRFETLRKIVDVVTPLQAVEFLLAGKRLQLSLHDRG 240

[Close]

BLAST of Cp4.1LG02g02120.1 vs. ExPASy Swiss-Prot
Match: Q9SN47 (Protein DOG1-like 1 OS=Arabidopsis thaliana OX=3702 GN=DOGL1 PE=2 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 3.6e-04
Identity = 20/55 (36.36%), Postives = 35/55 (63.64%), Query Frame = 0


Query: 85  EGLVSIIKKADALRLRTLQKVVELLTPKQAVEFLIAAAELQFGVRGWGMNEDRQR 140
           E +  ++ +AD LR+ TL K+V++LT  QA +FL+A  +L   +  WG + + +R
Sbjct: 212 EDMGGLLVEADKLRMTTLTKIVDILTAVQAADFLLAGKKLHLAMHEWGKSREHRR 266

[Close]

BLAST of Cp4.1LG02g02120.1 vs. ExPASy Swiss-Prot
Match: Q9SLV1 (Protein ZW2 OS=Arabidopsis thaliana OX=3702 GN=ZW2 PE=2 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 3.6e-04
Identity = 29/86 (33.72%), Postives = 41/86 (47.67%), Query Frame = 0


Query: 2  SSGLNFTSFYATWFDHLRHLIHQLSS--------TPTDHH-LVHTIISHYSEYFRVKSLA 61
          SS   F SF+  W    R  + QL+         TP +   LV   +SHY +Y+  KS+A
Sbjct: 5  SSSETFASFFNDWLCRHRQFVQQLAHLADETTIVTPIEEESLVSNFLSHYLQYYEEKSVA 64

Query: 62 ---AEKDPLSVFSAPWATSFERSLHW 76
             A  D    FS PW +S+E+ + W
Sbjct: 65 MSVAGDDIYDFFSPPWLSSYEKLILW 90

[Close]

BLAST of Cp4.1LG02g02120.1 vs. NCBI nr
Match: KAG7037453.1 (Protein DOG1-like 4, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 256 bits (654), Expect = 1.43e-84
Identity = 142/201 (70.65%), Postives = 143/201 (71.14%), Query Frame = 0


Query: 1   MSSGLNFTSFYATWFDHLRHLIHQLSSTPTDHH--LVHTIISHYSEYFRVKSLAAEKDPL 60
           MSSGLNFTSFYATWFDHLRHLIHQLSSTPTDHH  LVHTIISHYSEYFRVKSLAAEKDPL
Sbjct: 1   MSSGLNFTSFYATWFDHLRHLIHQLSSTPTDHHHHLVHTIISHYSEYFRVKSLAAEKDPL 60

Query: 61  SVFSAPWATSFERSLHW------------------------------------------- 120
           SVFSAPWATSFERSLHW                                           
Sbjct: 61  SVFSAPWATSFERSLHWVAGWRPTTTFHLIYSQSTILFQSQIADILHAPRTGDLGDLSPS 120

Query: 121 -----------RRVEASGKGEGLVSIIKKADALRLRTLQKVVELLTPKQAVEFLIAAAEL 145
                      RRVEASGKGEGLVSIIKKAD LRLRT+QKVVELLTPKQAVEFLIAAAEL
Sbjct: 121 QFRHEESELIQRRVEASGKGEGLVSIIKKADDLRLRTVQKVVELLTPKQAVEFLIAAAEL 180

[Close]

BLAST of Cp4.1LG02g02120.1 vs. NCBI nr
Match: XP_023523447.1 (LOW QUALITY PROTEIN: protein DOG1-like 4 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 256 bits (653), Expect = 5.35e-84
Identity = 145/230 (63.04%), Postives = 145/230 (63.04%), Query Frame = 0


Query: 1   MSSGLNFTSFYATWFDHLRHLIHQLSSTPTDHHLVHTIISHYSEYFRVKSLAAEKDPLSV 60
           MSSGLNFTSFYATWFDHLRHLIHQLSSTPTDHHLVHTIISHYSEYFRVKSLAAEKDPLSV
Sbjct: 1   MSSGLNFTSFYATWFDHLRHLIHQLSSTPTDHHLVHTIISHYSEYFRVKSLAAEKDPLSV 60

Query: 61  FSAPWATSFERSLHW--------------------------------------------- 120
           FSAPWATSFERSLHW                                             
Sbjct: 61  FSAPWATSFERSLHWVAGWRPTTTFHLIYSQSTILFHSQIADILHFKFCGXIEKLPXSFF 120

Query: 121 ----------------------------------------RRVEASGKGEGLVSIIKKAD 145
                                                   RRVEASGKGEGLVSIIKKAD
Sbjct: 121 YLFQHISIKSHIRGFMQVEEENAIMDELSEWQDEESELMQRRVEASGKGEGLVSIIKKAD 180

[Close]

BLAST of Cp4.1LG02g02120.1 vs. NCBI nr
Match: XP_022940748.1 (protein DOG1-like 4 [Cucurbita moschata])

HSP 1 Score: 247 bits (631), Expect = 1.04e-80
Identity = 142/226 (62.83%), Postives = 143/226 (63.27%), Query Frame = 0


Query: 1   MSSGLNFTSFYATWFDHLRHLIHQLSSTPTDHH---LVHTIISHYSEYFRVKSLAAEKDP 60
           MSSGLNFTSFYATWFDHLRHLIHQLSSTPTDHH   LVHTIISHYSEYFRVKSLAAEKDP
Sbjct: 1   MSSGLNFTSFYATWFDHLRHLIHQLSSTPTDHHHHHLVHTIISHYSEYFRVKSLAAEKDP 60

Query: 61  LSVFSAPWATSFERSLHW------------------------------------------ 120
           LSVFSAPWATSFERSLHW                                          
Sbjct: 61  LSVFSAPWATSFERSLHWVAGWRPTTTFHLIYSQSTILFQSQIADILHAPRTGDLGDLSP 120

Query: 121 ------------------------------------RRVEASGKGEGLVSIIKKADALRL 145
                                               RRVEASGK EGLVSIIKKAD LRL
Sbjct: 121 SQFRRVSEIQCQTVEEENAITDELSGWQDEESELMLRRVEASGKSEGLVSIIKKADDLRL 180

[Close]

BLAST of Cp4.1LG02g02120.1 vs. NCBI nr
Match: KAG6607935.1 (Protein DOG1-like 4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 247 bits (630), Expect = 1.43e-80
Identity = 142/225 (63.11%), Postives = 143/225 (63.56%), Query Frame = 0


Query: 1   MSSGLNFTSFYATWFDHLRHLIHQLSSTPTDHH--LVHTIISHYSEYFRVKSLAAEKDPL 60
           MSSGLNFTSFYATWFDHLRHLIHQLSSTPTDHH  LVHTIISHYSEYFRVKSLAAEKDPL
Sbjct: 1   MSSGLNFTSFYATWFDHLRHLIHQLSSTPTDHHHHLVHTIISHYSEYFRVKSLAAEKDPL 60

Query: 61  SVFSAPWATSFERSLHW------------------------------------------- 120
           SVFSAPWATSFERSLHW                                           
Sbjct: 61  SVFSAPWATSFERSLHWVAGWRPTTTFHLIYSQSTILFQSQIADILHAPRTGDLGDLSPS 120

Query: 121 -----------------------------------RRVEASGKGEGLVSIIKKADALRLR 145
                                              RRVEASGKGEGLVSIIKKAD LRLR
Sbjct: 121 QFRRVSEIQCQTVEEENAITDELSEWQDEESELIQRRVEASGKGEGLVSIIKKADDLRLR 180

[Close]

BLAST of Cp4.1LG02g02120.1 vs. NCBI nr
Match: XP_022981708.1 (protein DOG1-like 4 [Cucurbita maxima])

HSP 1 Score: 238 bits (606), Expect = 6.61e-77
Identity = 137/226 (60.62%), Postives = 140/226 (61.95%), Query Frame = 0


Query: 1   MSSGLNFTSFYATWFDHLRHLIHQLSSTPTDHH---LVHTIISHYSEYFRVKSLAAEKDP 60
           MSSGLNF SFYATWFDHL HLIHQLSSTPTDHH   LVHTIISHYSEYFRVKSLAAE+DP
Sbjct: 1   MSSGLNFASFYATWFDHLHHLIHQLSSTPTDHHHHHLVHTIISHYSEYFRVKSLAAERDP 60

Query: 61  LSVFSAPWATSFERSLHW------------------------------------------ 120
           LSVFSAPWATSFERSLHW                                          
Sbjct: 61  LSVFSAPWATSFERSLHWVAGWRPTTTFHLIYSQSTILFQSQIADILHAPRTSDLGDLSP 120

Query: 121 ------------------------------------RRVEASGKGEGLVSIIKKADALRL 145
                                               RRVEASGKGEGLV IIKKAD LRL
Sbjct: 121 FQFHRVSEIQCQTVEEENAITDELSEWQDEESELMQRRVEASGKGEGLVRIIKKADDLRL 180

[Close]

BLAST of Cp4.1LG02g02120.1 vs. ExPASy TrEMBL
Match: A0A6J1FQ63 (protein DOG1-like 4 OS=Cucurbita moschata OX=3662 GN=LOC111446251 PE=4 SV=1)

HSP 1 Score: 247 bits (631), Expect = 5.04e-81
Identity = 142/226 (62.83%), Postives = 143/226 (63.27%), Query Frame = 0


Query: 1   MSSGLNFTSFYATWFDHLRHLIHQLSSTPTDHH---LVHTIISHYSEYFRVKSLAAEKDP 60
           MSSGLNFTSFYATWFDHLRHLIHQLSSTPTDHH   LVHTIISHYSEYFRVKSLAAEKDP
Sbjct: 1   MSSGLNFTSFYATWFDHLRHLIHQLSSTPTDHHHHHLVHTIISHYSEYFRVKSLAAEKDP 60

Query: 61  LSVFSAPWATSFERSLHW------------------------------------------ 120
           LSVFSAPWATSFERSLHW                                          
Sbjct: 61  LSVFSAPWATSFERSLHWVAGWRPTTTFHLIYSQSTILFQSQIADILHAPRTGDLGDLSP 120

Query: 121 ------------------------------------RRVEASGKGEGLVSIIKKADALRL 145
                                               RRVEASGK EGLVSIIKKAD LRL
Sbjct: 121 SQFRRVSEIQCQTVEEENAITDELSGWQDEESELMLRRVEASGKSEGLVSIIKKADDLRL 180

[Close]

BLAST of Cp4.1LG02g02120.1 vs. ExPASy TrEMBL
Match: A0A6J1J2V0 (protein DOG1-like 4 OS=Cucurbita maxima OX=3661 GN=LOC111480771 PE=4 SV=1)

HSP 1 Score: 238 bits (606), Expect = 3.20e-77
Identity = 137/226 (60.62%), Postives = 140/226 (61.95%), Query Frame = 0


Query: 1   MSSGLNFTSFYATWFDHLRHLIHQLSSTPTDHH---LVHTIISHYSEYFRVKSLAAEKDP 60
           MSSGLNF SFYATWFDHL HLIHQLSSTPTDHH   LVHTIISHYSEYFRVKSLAAE+DP
Sbjct: 1   MSSGLNFASFYATWFDHLHHLIHQLSSTPTDHHHHHLVHTIISHYSEYFRVKSLAAERDP 60

Query: 61  LSVFSAPWATSFERSLHW------------------------------------------ 120
           LSVFSAPWATSFERSLHW                                          
Sbjct: 61  LSVFSAPWATSFERSLHWVAGWRPTTTFHLIYSQSTILFQSQIADILHAPRTSDLGDLSP 120

Query: 121 ------------------------------------RRVEASGKGEGLVSIIKKADALRL 145
                                               RRVEASGKGEGLV IIKKAD LRL
Sbjct: 121 FQFHRVSEIQCQTVEEENAITDELSEWQDEESELMQRRVEASGKGEGLVRIIKKADDLRL 180

[Close]

BLAST of Cp4.1LG02g02120.1 vs. ExPASy TrEMBL
Match: A0A6J1FCB7 (protein DOG1-like 4 OS=Cucurbita moschata OX=3662 GN=LOC111442722 PE=4 SV=1)

HSP 1 Score: 200 bits (508), Expect = 3.39e-62
Identity = 119/234 (50.85%), Postives = 130/234 (55.56%), Query Frame = 0


Query: 1   MSSGLNFTSFYATWFDHLRHLIHQLSSTPTD------------HHLVHTIISHYSEYFRV 60
           MSSG NFT FYATWFDHLRHLIHQLSST T              HLVHT++SHYS+Y+ V
Sbjct: 1   MSSGFNFTGFYATWFDHLRHLIHQLSSTTTAAKENRSSTTDDLRHLVHTVMSHYSDYYHV 60

Query: 61  KSLAAEKDPLSVFSAPWATSFERSLHW--------------------------------- 120
           KSLAAE+DPLSVFSAPWATS ERSLHW                                 
Sbjct: 61  KSLAAERDPLSVFSAPWATSLERSLHWIAGWRPTTTFHLIYSESSILFESRIVDILHGLR 120

Query: 121 ---------------------------------------------RRVEASGKGEGLVSI 144
                                                         R E +GK EGLVSI
Sbjct: 121 TGDLGDLSPSQFCRVSELQCQTVEEENAITDELSEWQDNVSDLIGTRTELTGKVEGLVSI 180

[Close]

BLAST of Cp4.1LG02g02120.1 vs. ExPASy TrEMBL
Match: A0A6J1IKW4 (protein DOG1-like 4 OS=Cucurbita maxima OX=3661 GN=LOC111476548 PE=4 SV=1)

HSP 1 Score: 197 bits (500), Expect = 5.55e-61
Identity = 118/234 (50.43%), Postives = 129/234 (55.13%), Query Frame = 0


Query: 1   MSSGLNFTSFYATWFDHLRHLIHQLSSTPTD------------HHLVHTIISHYSEYFRV 60
           MSSG NFT FYATWFDHLRHLIHQLSST T              HLVHT++SHYS+Y+ V
Sbjct: 1   MSSGFNFTGFYATWFDHLRHLIHQLSSTTTAAKENRSSTTDDLRHLVHTVMSHYSDYYHV 60

Query: 61  KSLAAEKDPLSVFSAPWATSFERSLHW--------------------------------- 120
           KSLAAE+DPLSVFSAPWATS ERSLHW                                 
Sbjct: 61  KSLAAERDPLSVFSAPWATSLERSLHWIAGWRPTTTFHLIYTESSILFESRIVDILHGLR 120

Query: 121 ---------------------------------------------RRVEASGKGEGLVSI 144
                                                         R E + K EGLVSI
Sbjct: 121 TGDLGDLSPSQFCRVSELQCQTVEEENAITDELSEWQDNVSELIGTRTELTEKVEGLVSI 180

[Close]

BLAST of Cp4.1LG02g02120.1 vs. ExPASy TrEMBL
Match: A0A0A0L389 (DOG1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G625020 PE=4 SV=1)

HSP 1 Score: 188 bits (478), Expect = 1.06e-57
Identity = 111/225 (49.33%), Postives = 126/225 (56.00%), Query Frame = 0


Query: 3   SGLNFTSFYATWFDHLRHLIHQLSSTPTDHH--------LVHTIISHYSEYFRVKSLAAE 62
           SG NFTSFYATWFDHL  L+ QLSST  D+H        LV T++SHYS+Y+RVKS+AAE
Sbjct: 4   SGFNFTSFYATWFDHLHRLVDQLSSTAKDNHNSSSAPDHLVQTVMSHYSDYYRVKSMAAE 63

Query: 63  KDPLSVFSAPWATSFERSLHW--------------------------------------- 122
           +DPLSVFSAPWATS ERSLHW                                       
Sbjct: 64  RDPLSVFSAPWATSLERSLHWIAGWRPTTTFHLIYTESSILFESRIFDILRGLHTGDLGD 123

Query: 123 ---------------------------------------RRVEASGKGEGLVSIIKKADA 141
                                                   R E +G+ EGLV+IIKKADA
Sbjct: 124 LSPSQIRRVSELQCETVEEENAITEELSEWQDDVSELLGTRTEVTGRVEGLVNIIKKADA 183

[Close]

BLAST of Cp4.1LG02g02120.1 vs. TAIR 10
Match: AT3G14880.1 (BEST Arabidopsis thaliana protein match is: transcription factor-related (TAIR:AT4G18650.1); Has 560 Blast hits to 560 proteins in 40 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 558; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 64.3 bits (155), Expect = 9.2e-11
Identity = 30/55 (54.55%), Postives = 41/55 (74.55%), Query Frame = 0


Query: 87  LVSIIKKADALRLRTLQKVVELLTPKQAVEFLIAAAELQFGVRGWGMNEDRQRGN 142
           L  I+ + D LRLRT+ +VVE+L+P Q  EFL+AAAEL+ GV GWG + DR+R +
Sbjct: 188 LAEIVHRTDDLRLRTITRVVEVLSPLQQAEFLVAAAELRTGVAGWGTSHDRRRSS 242

[Close]

BLAST of Cp4.1LG02g02120.1 vs. TAIR 10
Match: AT3G14880.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to karrikin; BEST Arabidopsis thaliana protein match is: transcription factor-related (TAIR:AT4G18650.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 64.3 bits (155), Expect = 9.2e-11
Identity = 30/55 (54.55%), Postives = 41/55 (74.55%), Query Frame = 0


Query: 87  LVSIIKKADALRLRTLQKVVELLTPKQAVEFLIAAAELQFGVRGWGMNEDRQRGN 142
           L  I+ + D LRLRT+ +VVE+L+P Q  EFL+AAAEL+ GV GWG + DR+R +
Sbjct: 181 LAEIVHRTDDLRLRTITRVVEVLSPLQQAEFLVAAAELRTGVAGWGTSHDRRRSS 235

[Close]

BLAST of Cp4.1LG02g02120.1 vs. TAIR 10
Match: AT4G18650.1 (transcription factor-related )

HSP 1 Score: 53.9 bits (128), Expect = 1.2e-07
Identity = 28/57 (49.12%), Postives = 40/57 (70.18%), Query Frame = 0


Query: 78  VEASGKG--EGLVSIIKKADALRLRTLQKVVELLTPKQAVEFLIAAAELQFGVRGWG 133
           VEA+ +G   GL  ++K AD +RL+TL+ ++++LTP Q VEFL AAA  Q  +R WG
Sbjct: 167 VEAAVRGLSMGLEKMVKAADCVRLKTLKGILDILTPPQCVEFLAAAATFQVQLRRWG 223

[Close]

BLAST of Cp4.1LG02g02120.1 vs. TAIR 10
Match: AT4G18690.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G18680.1); Has 522 Blast hits to 522 proteins in 39 species: Archae - 0; Bacteria - 0; Metazoa - 9; Fungi - 0; Plants - 513; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 51.6 bits (122), Expect = 6.1e-07
Identity = 23/55 (41.82%), Postives = 35/55 (63.64%), Query Frame = 0


Query: 85  EGLVSIIKKADALRLRTLQKVVELLTPKQAVEFLIAAAELQFGVRGWGMNEDRQR 140
           EG+  ++ +AD LR  TL+K+V+++TP QA EFL+A   L   +  WG   + QR
Sbjct: 201 EGMAVLMVEADKLRFETLRKIVDVVTPVQAAEFLLAGKRLHISLHEWGRVREEQR 255

[Close]

BLAST of Cp4.1LG02g02120.1 vs. TAIR 10
Match: AT4G18680.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G18690.1); Has 361 Blast hits to 361 proteins in 33 species: Archae - 0; Bacteria - 0; Metazoa - 8; Fungi - 0; Plants - 353; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 47.8 bits (112), Expect = 8.9e-06
Identity = 22/48 (45.83%), Postives = 33/48 (68.75%), Query Frame = 0


Query: 85  EGLVSIIKKADALRLRTLQKVVELLTPKQAVEFLIAAAELQFGVRGWG 133
           EG+  ++ +AD LR  TL+K+V+++TP QAVEFL+A   LQ  +   G
Sbjct: 173 EGMAVLLAEADKLRFETLRKIVDVVTPLQAVEFLLAGKRLQLSLHDRG 220

The following BLAST results are available for this feature:

BLAST of Cp4.1LG02g02120.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q84JC2	1.7e-06	49.12	Protein DOG1-like 4 OS=Arabidopsis thaliana OX=3702 GN=DOGL4 PE=1 SV=1	[more]
Q58FV0	8.6e-06	41.82	Protein DOG1-like 3 OS=Arabidopsis thaliana OX=3702 GN=DOGL3 PE=2 SV=1	[more]
Q9SN45	1.2e-04	45.83	Protein DOG1-like 2 OS=Arabidopsis thaliana OX=3702 GN=DOGL2 PE=4 SV=2	[more]
Q9SN47	3.6e-04	36.36	Protein DOG1-like 1 OS=Arabidopsis thaliana OX=3702 GN=DOGL1 PE=2 SV=1	[more]
Q9SLV1	3.6e-04	33.72	Protein ZW2 OS=Arabidopsis thaliana OX=3702 GN=ZW2 PE=2 SV=1	[more]

BLAST of Cp4.1LG02g02120.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7037453.1	1.43e-84	70.65	Protein DOG1-like 4, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023523447.1	5.35e-84	63.04	LOW QUALITY PROTEIN: protein DOG1-like 4 [Cucurbita pepo subsp. pepo]	[more]
XP_022940748.1	1.04e-80	62.83	protein DOG1-like 4 [Cucurbita moschata]	[more]
KAG6607935.1	1.43e-80	63.11	Protein DOG1-like 4, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022981708.1	6.61e-77	60.62	protein DOG1-like 4 [Cucurbita maxima]	[more]

BLAST of Cp4.1LG02g02120.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FQ63	5.04e-81	62.83	protein DOG1-like 4 OS=Cucurbita moschata OX=3662 GN=LOC111446251 PE=4 SV=1	[more]
A0A6J1J2V0	3.20e-77	60.62	protein DOG1-like 4 OS=Cucurbita maxima OX=3661 GN=LOC111480771 PE=4 SV=1	[more]
A0A6J1FCB7	3.39e-62	50.85	protein DOG1-like 4 OS=Cucurbita moschata OX=3662 GN=LOC111442722 PE=4 SV=1	[more]
A0A6J1IKW4	5.55e-61	50.43	protein DOG1-like 4 OS=Cucurbita maxima OX=3661 GN=LOC111476548 PE=4 SV=1	[more]
A0A0A0L389	1.06e-57	49.33	DOG1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G625020 PE=4 S...	[more]

BLAST of Cp4.1LG02g02120.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G14880.1	9.2e-11	54.55	BEST Arabidopsis thaliana protein match is: transcription factor-related (TAIR:A...	[more]
AT3G14880.2	9.2e-11	54.55	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to karrikin; BES...	[more]
AT4G18650.1	1.2e-07	49.12	transcription factor-related	[more]
AT4G18690.1	6.1e-07	41.82	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT4G18680.1	8.9e-06	45.83	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025422	Transcription factor TGA like domain	PFAM	PF14144	DOG1	coord: 18..75 e-value: 3.2E-15 score: 56.1
IPR025422	Transcription factor TGA like domain	PROSITE	PS51806	DOG1	coord: 1..138 score: 10.459506
None	No IPR available	PANTHER	PTHR46354:SF12	DNA-BINDING PROTEIN-LIKE PROTEIN	coord: 5..75
None	No IPR available	PANTHER	PTHR46354	FAMILY NOT NAMED	coord: 82..141
None	No IPR available	PANTHER	PTHR46354:SF12	DNA-BINDING PROTEIN-LIKE PROTEIN	coord: 82..141
None	No IPR available	PANTHER	PTHR46354	FAMILY NOT NAMED	coord: 5..75

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cp4.1LG02g02120	Cp4.1LG02g02120	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG02g02120.1:exon:002	Cp4.1LG02g02120.1:exon:002	exon
Cp4.1LG02g02120.1:exon:001	Cp4.1LG02g02120.1:exon:001	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG02g02120.1:cds:002	Cp4.1LG02g02120.1:cds:002	CDS
Cp4.1LG02g02120.1:cds:001	Cp4.1LG02g02120.1:cds:001	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG02g02120.1	Cp4.1LG02g02120.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006351	transcription, DNA-templated
molecular_function	GO:0043565	sequence-specific DNA binding