Cp4.1LG01g16090.1 (mRNA) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTACCGTTGATTTTTGGATGGATCCAAACAGGGAATTAGCCGTTGCCTTTCCACTCGAGGTTCTCTAGGAGACGGAACCCTTCATCTTTTAGTCTCGTCCTGCGATTCGAGTTCTCAAATTTCCTCAGATCCACTCGTTTTTCTCTTTGTCAATTTGATCACTCGATCGATTTCACTTTCCAATTTGGTTACCCCTGTATCGATTAGAAGCCCTAAATCCGATCCTCGTCTTAGAATCGAAGAAATACAGGAACAATTCTTATTGTTTCAGAAGAGATTTGAAGAAGATTTGTTGGAATGGCTTCGAAAACAGCGTCCAAAGACATCATCACTCTTCGCGGTTCTGCGGCGATTGTCAGCGAGTTCTTCGGTATGTTATGCTTTAGTGCCTTCTGAAACCCTATTTACTTCTGGCGATTATCGATGAATATCCTTGGCTGATTAGTTCTTTTTCGTTGTCCTGAAATTTATCATTTAGGGTATGCTGCTAATAGGTATGAATTCTGGATGCGCTTTCTCTGTTCTTATTTTTGTTTTGCGATCATGTAAATTTGCATTTTGTCGCTTATAAGCGATGTCGATTGTAAATGTGTAGCATCTTGTACAATCGTGGACTTTATCCTGAAGAAAGTTTTGCAAGGGTGAAGAAATATGGACTTCCAATGTTGCTTACTCAAGATGAAGGTGTTAAGACCTTCATTTCTAATCTTACTGCTCAGCTTTCTGGTAAGTTCCCCTTCTCTAAATGAAAGATTTGTATGCTTTTTGTTACTTTCCTGAGAAGTGTATTTATTGAGAAGTTTTTGAATCGTGAAATTGGTTTTAGAATGGCTGGAAGCTGGGAAGCTGCAAAGGGTTGTGCTGGTTATAATGAGCAAAGCCAACAATGAGGTGCTTGAGAGGTGGAATTTCAGAATTGAAACTGATGGAGAGGTGGTCGAGCAAGGGTAAGAAATTCATGGAAAACCTTCTCTTCCCTTGCATAGACTTCTGGATTTGGTGTTTGATTAGATAAACATTGTTGCAGTGTGTCGAGGGAAAAGAGTGATAAAGAAATAATGAGGGAGATCCAAGCAATTATGAGACAGATTGCTTCGAGCATCACTTACTTGCCCTGCCTAGATGAACCCTGTAAGTGTTGACAAACTTATCATAATATGTGCTATTGTTAAGTCGGGTTCTGAATCCATGGGATGTCCTGAAGTCATTATGCAGAACCTTACAGGCGTTGCTTTAAGCATATCATTTTCTTGCCCAGCCTAGATGATGAACCCTTTATGTGTTGGCAAAATTACCACCATGTGTCATTTGAAAATCATGGGATGCCGTATAATTATCATGTCATCATGAAATCAATACTAGCCAACTAGAACATAGCTTGAATGGTTGGGCATGTGTCACTTTCTTATGGGATCTATGTTCTAATCATTCCCCTTGTTTGCATTCTAAAAAGGAATCATTAGCTTATTATAATGATTCGTGAGTGTTTTAAAAAGATAATCGAGATGTTTGAGCTCTTTTGCTTTTTGGACGATATTGATCCAAGATGCTCAATCAAGGTGCTCTTGATGTTTTTGTTGTGTCAGGTGTATTTGATGTGTTAGCATACACAGATAAAGATCTTGCAGTTCCATTTACTTGGATCGAGAGTGACCCTAAGCTGATTGCTAATCCACAAATGGTGAAGCTGCACTCATTTGATACAAAGGTGAGGGAATGGGACTCCGTGGAGGAATATCAAAACTTATTTGTTAAGCAAATTAACTTTTAAATGGTGTTATTGCAGATTCACAAAGTGGACACTCTTGTTTCTTACAAGAACGACGACTGCGACGATGAGTAAAAGAAACAAACTCGCTTTCCTGGAATTTGTGGTTGGGTGTTCTGGGATCCCTCCAACCCGATCGCTTTCAAGGTGGCATTTTGTGAATCTTTTATTCACATTTGGTGTTGTACTGTAATGTAATGTGTAATGTAGGAACAATGTTTTGTGGGAGCGAGTGGTGAATATAGGGTAGGATGGGTTCGCTTAGATTTCTTTCCATCTGTGAATGGTTTTGGGTTTGTTTGTTTGTTGTGTGTAGTTGGGGGAACTTTTGAAGAAAACATGTTTGTACGGACAAAGGTTTTATCTTAAGAACAAGGGTGGACCAAGTCAGATTTGTTCAGACATATTCATAGTAAGAGAGGTTCAAATCACAATTCCAAATAAAACTAAAGGAATTACATTAGAAAATAAATTAAACGTCTAAGAAATTGTACAGTACAACTTATGTATGGAAATTGAAACACCCAACAGGACAGATAAAGTCGGAACTTTATAGGAATAACCCCGACTTCATTTATTTCATTATTGAAACTTCCCAACAACATGACATTAGGATCCCCAAGTCCATGAAAATACGATGTCAAAGTTGTAACAAAGCACACAGTGCATGGTGCAGCTCACTCATAACATGAAACTGTATACCTGACGCAAATATCAAAGACTATATATAGTACTACTGACATACTCACCAACCACAACAATGGCCAGAAACAGGACGTAATGAATGAATAAAGACGACCCAAGTCCACAAAAAGGTACCTTCTCTCCCAACATTCTGAAGTGTTGCGTACACACAGTCTGCGCCATGCAAGCTTCCAGTAGCTAGAGGAAGAAAAAAACATGGAGACCCAAAAACGAAATCATTAACTCTGAAACACCAGTTCCTAAAAGCATTATTCACCAACATATGATTATATAATACGTAAGACTCGTACACCAATACAATAATCGAAAGTTATATCCAACATTTGGATTTGACAATGCCAGTCAATTCTCCGATCATTGGCTGCTCTGGATTTCTCGCAAGAACCAATCTGAAAAAATTGACTTATATGCAGATAATATTACTTAACCAAGAATCAAGAAGCTGCAAGTCTCTTCATCAAGGATGGAAGAACCCAGTTCTCCCACCCTCTTATTCACATTTCAATATCTCCTTCTCACAATCAATGCAACGCAAATCCAGAGAAAATGTCTCCTCATGTACTGTCTCGTCAATGCAACGTCCACACCAGTCGCACCGAGCTATGCAAAGGGTGCATCCCCTGCATTTCTGAGTGTTGGCATCAGGGTTGGTGTCACCTTCCTTTATTCCCTTACAACCAACCACCGGGCAGTCATAAACGATCCTCATGTTCGTGCATTTTGGGCATCTTTCTATGTCAATGGCACGCCCATCATTGGATGAAGGAAGATGAGTTCCACCTCGATAAAATCGAGGCTCGTGAGTATTTAGTTGGGTCAAGTTGTCAGTACCTAATAACAGCTTCTCCAGCTCTTTAAAATGAGCTTCTGTTACTCCATACATTCCAGCTACACTTAAATGTTTTATTCCCGGACTACCTTCTGACTTGAAGGCCTTCAAATTACTAACAATGCCTCCAATGGTGAGTCTTGTGCATCCTGGAACACATAACTGGAGAAAAGAAGTAAAATTAGAAACTAATGAGTATCTTAAATCGATACTAAGAATTCTTTACAATAACGGTGCAAAACTATATTTCATACCTTTGCGACCTTAGGATTATTGAGAAGAACCTGGTTGAGACCATCATCACTTATCATTACGCAGTTCACGAGGCTCAAACTTTCCAGACCACCTTGAGCCTTGCTAGTCAGCTTTAAGAGAAAATCGTCTGTAATCTTCACATCCAGCTTTCCACATATGTTAATGTTTCTC ATGTTACCAAGATTTGTTGGAATGGCTTCGAAAACAGCGTCCAAAGACATCATCACTCTTCGCGGTTCTGCGGCGATTGTCAGCGAGTTCTTCGGGTATGCTGCTAATAGCATCTTGTACAATCGTGGACTTTATCCTGAAGAAAGTTTTGCAAGGGTGAAGAAATATGGACTTCCAATGTTGCTTACTCAAGATGAAGGTGTTAAGACCTTCATTTCTAATCTTACTGCTCAGCTTTCTGAATGGCTGGAAGCTGGGAAGCTGCAAAGGGTTGTGCTGGTTATAATGAGCAAAGCCAACAATGAGGTGCTTGAGAGGTGGAATTTCAGAATTGAAACTGATGGAGAGGTGGTCGAGCAAGGTGTGTCGAGGGAAAAGAGTGATAAAGAAATAATGAGGGAGATCCAAGCAATTATGAGACAGATTGCTTCGAGCATCACTTACTTGCCCTGCCTAGATGAACCCTGTGTATTTGATGTGTTAGCATACACAGATAAAGATCTTGCAGTTCCATTTACTTGGATCGAGAGTGACCCTAAGCTGATTGCTAATCCACAAATGGTGAAGCTGCACTCATTTGATACAAAGATTCACAAAGTGGACACTCTTGTTTCTTACAAGAACGACGACTGCGACGATGAGTAAAAGAAACAAACTCGCTTTCCTGGAATTTGTGGTTGGGTGTTCTGGGATCCCTCCAACCCGATCGCTTTCAAGGTGGCATTTTGTGAATCTTTTATTCACATTTGGTGTTGTACTGTAATGTAATGTGTAATGTAGGAACAATGTTTTGTGGGAGCGAGTGGTGAATATAGGGTAGGATGGGTTCGCTTAGATTTCTTTCCATCTGTGAATGGTTTTGGGTTTGTTTGTTTGTTGTGTGTAGTTGGGGGAACTTTTGAAGAAAACATGTTTGTACGGACAAAGGTTTTATCTTAAGAACAAGGGTGGACCAAGTCAGATTTGTTCAGACATATTCATAGTAAGAGAGGTTCAAATCACAATTCCAAATAAAACTAAAGGAATTACATTAGAAAATAAATTAAACGTCTAAGAAATTGTACAGTACAACTTATGTATGGAAATTGAAACACCCAACAGGACAGATAAAGTCGGAACTTTATAGGAATAACCCCGACTTCATTTATTTCATTATTGAAACTTCCCAACAACATGACATTAGGATCCCCAAGTCCATGAAAATACGATGTCAAAGTTGTAACAAAGCACACAGTGCATGGTGCAGCTCACTCATAACATGAAACTGTATACCTGACGCAAATATCAAAGACTATATATAGTACTACTGACATACTCACCAACCACAACAATGGCCAGAAACAGGACGTAATGAATGAATAAAGACGACCCAAGTCCACAAAAAGGTACCTTCTCTCCCAACATTCTGAAGTGTTGCGTACACACAGTCTGCGCCATGCAAGCTTCCAGTAGCTAGAGGAAGAAAAAAACATGGAGACCCAAAAACGAAATCATTAACTCTGAAACACCAGTTCCTAAAAGCATTATTCACCAACATATGATTATATAATACGTAAGACTCGTACACCAATACAATAATCGAAAGTTATATCCAACATTTGGATTTGACAATGCCAGTCAATTCTCCGATCATTGGCTGCTCTGGATTTCTCGCAAGAACCAATCTGAAAAAATTGACTTATATGCAGATAATATTACTTAACCAAGAATCAAGAAGCTGCAAGTCTCTTCATCAAGGATGGAAGAACCCAGTTCTCCCACCCTCTTATTCACATTTCAATATCTCCTTCTCACAATCAATGCAACGCAAATCCAGAGAAAATGTCTCCTCATGTACTGTCTCGTCAATGCAACGTCCACACCAGTCGCACCGAGCTATGCAAAGGGTGCATCCCCTGCATTTCTGAGTGTTGGCATCAGGGTTGGTGTCACCTTCCTTTATTCCCTTACAACCAACCACCGGGCAGTCATAAACGATCCTCATGTTCGTGCATTTTGGGCATCTTTCTATGTCAATGGCACGCCCATCATTGGATGAAGGAAGATGAGTTCCACCTCGATAAAATCGAGGCTCGTGAGTATTTAGTTGGGTCAAGTTGTCAGTACCTAATAACAGCTTCTCCAGCTCTTTAAAATGAGCTTCTGTTACTCCATACATTCCAGCTACACTTAAATGTTTTATTCCCGGACTACCTTCTGACTTGAAGGCCTTCAAATTACTAACAATGCCTCCAATGGTGAGTCTTGTGCATCCTGGAACACATAACTGGAGAAAAGAAGTAAAATTAGAAACTAATGAGTATCTTAAATCGATACTAAGAATTCTTTACAATAACGGTGCAAAACTATATTTCATACCTTTGCGACCTTAGGATTATTGAGAAGAACCTGGTTGAGACCATCATCACTTATCATTACGCAGTTCACGAGGCTCAAACTTTCCAGACCACCTTGAGCCTTGCTAGTCAGCTTTAAGAGAAAATCGTCTGTAATCTTCACATCCAGCTTTCCACATATGTTAATGTTTCTC ATGTTACCAAGATTTGTTGGAATGGCTTCGAAAACAGCGTCCAAAGACATCATCACTCTTCGCGGTTCTGCGGCGATTGTCAGCGAGTTCTTCGGGTATGCTGCTAATAGCATCTTGTACAATCGTGGACTTTATCCTGAAGAAAGTTTTGCAAGGGTGAAGAAATATGGACTTCCAATGTTGCTTACTCAAGATGAAGGTGTTAAGACCTTCATTTCTAATCTTACTGCTCAGCTTTCTGAATGGCTGGAAGCTGGGAAGCTGCAAAGGGTTGTGCTGGTTATAATGAGCAAAGCCAACAATGAGGTGCTTGAGAGGTGGAATTTCAGAATTGAAACTGATGGAGAGGTGGTCGAGCAAGGTGTGTCGAGGGAAAAGAGTGATAAAGAAATAATGAGGGAGATCCAAGCAATTATGAGACAGATTGCTTCGAGCATCACTTACTTGCCCTGCCTAGATGAACCCTGTGTATTTGATGTGTTAGCATACACAGATAAAGATCTTGCAGTTCCATTTACTTGGATCGAGAGTGACCCTAAGCTGATTGCTAATCCACAAATGGTGAAGCTGCACTCATTTGATACAAAGATTCACAAAGTGGACACTCTTGTTTCTTACAAGAACGACGACTGCGACGATGAGTAA MLPRFVGMASKTASKDIITLRGSAAIVSEFFGYAANSILYNRGLYPEESFARVKKYGLPMLLTQDEGVKTFISNLTAQLSEWLEAGKLQRVVLVIMSKANNEVLERWNFRIETDGEVVEQGVSREKSDKEIMREIQAIMRQIASSITYLPCLDEPCVFDVLAYTDKDLAVPFTWIESDPKLIANPQMVKLHSFDTKIHKVDTLVSYKNDDCDDE Homology
BLAST of Cp4.1LG01g16090.1 vs. ExPASy Swiss-Prot
Match: Q9LU93 (Mitotic spindle checkpoint protein MAD2 OS=Arabidopsis thaliana OX=3702 GN=MAD2 PE=1 SV=1) HSP 1 Score: 355.5 bits (911), Expect = 4.1e-97 Identity = 179/208 (86.06%), Postives = 194/208 (93.27%), Query Frame = 0
BLAST of Cp4.1LG01g16090.1 vs. ExPASy Swiss-Prot
Match: Q9XFH3 (Mitotic spindle checkpoint protein MAD2 OS=Zea mays OX=4577 GN=MAD2 PE=2 SV=1) HSP 1 Score: 345.1 bits (884), Expect = 5.6e-94 Identity = 173/207 (83.57%), Postives = 189/207 (91.30%), Query Frame = 0
BLAST of Cp4.1LG01g16090.1 vs. ExPASy Swiss-Prot
Match: Q556Y9 (Mitotic spindle assembly checkpoint protein MAD2A OS=Dictyostelium discoideum OX=44689 GN=mad2l1-1 PE=3 SV=1) HSP 1 Score: 222.2 bits (565), Expect = 5.5e-57 Identity = 112/201 (55.72%), Postives = 145/201 (72.14%), Query Frame = 0
BLAST of Cp4.1LG01g16090.1 vs. ExPASy Swiss-Prot
Match: Q9Z1B5 (Mitotic spindle assembly checkpoint protein MAD2A OS=Mus musculus OX=10090 GN=Mad2l1 PE=1 SV=2) HSP 1 Score: 207.2 bits (526), Expect = 1.8e-52 Identity = 103/200 (51.50%), Postives = 140/200 (70.00%), Query Frame = 0
BLAST of Cp4.1LG01g16090.1 vs. ExPASy Swiss-Prot
Match: Q13257 (Mitotic spindle assembly checkpoint protein MAD2A OS=Homo sapiens OX=9606 GN=MAD2L1 PE=1 SV=1) HSP 1 Score: 199.1 bits (505), Expect = 4.9e-50 Identity = 98/200 (49.00%), Postives = 138/200 (69.00%), Query Frame = 0
BLAST of Cp4.1LG01g16090.1 vs. NCBI nr
Match: XP_022956917.1 (mitotic spindle checkpoint protein MAD2 [Cucurbita moschata] >XP_022967135.1 mitotic spindle checkpoint protein MAD2 [Cucurbita maxima] >XP_023534396.1 mitotic spindle checkpoint protein MAD2-like [Cucurbita pepo subsp. pepo] >KAG6601576.1 Mitotic spindle checkpoint protein MAD2, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 407 bits (1047), Expect = 3.72e-143 Identity = 207/207 (100.00%), Postives = 207/207 (100.00%), Query Frame = 0
BLAST of Cp4.1LG01g16090.1 vs. NCBI nr
Match: XP_023542211.1 (mitotic spindle checkpoint protein MAD2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 406 bits (1044), Expect = 1.07e-142 Identity = 206/207 (99.52%), Postives = 207/207 (100.00%), Query Frame = 0
BLAST of Cp4.1LG01g16090.1 vs. NCBI nr
Match: XP_022998654.1 (mitotic spindle checkpoint protein MAD2-like [Cucurbita maxima]) HSP 1 Score: 405 bits (1040), Expect = 4.35e-142 Identity = 206/207 (99.52%), Postives = 206/207 (99.52%), Query Frame = 0
BLAST of Cp4.1LG01g16090.1 vs. NCBI nr
Match: KAG7012753.1 (Mitotic spindle checkpoint protein MAD2 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 406 bits (1044), Expect = 1.26e-141 Identity = 206/207 (99.52%), Postives = 207/207 (100.00%), Query Frame = 0
BLAST of Cp4.1LG01g16090.1 vs. NCBI nr
Match: XP_022944941.1 (mitotic spindle checkpoint protein MAD2-like [Cucurbita moschata]) HSP 1 Score: 403 bits (1035), Expect = 2.51e-141 Identity = 206/207 (99.52%), Postives = 206/207 (99.52%), Query Frame = 0
BLAST of Cp4.1LG01g16090.1 vs. ExPASy TrEMBL
Match: A0A6J1HTK5 (mitotic spindle checkpoint protein MAD2 OS=Cucurbita maxima OX=3661 GN=LOC111466640 PE=3 SV=1) HSP 1 Score: 407 bits (1047), Expect = 1.80e-143 Identity = 207/207 (100.00%), Postives = 207/207 (100.00%), Query Frame = 0
BLAST of Cp4.1LG01g16090.1 vs. ExPASy TrEMBL
Match: A0A6J1GXP9 (mitotic spindle checkpoint protein MAD2 OS=Cucurbita moschata OX=3662 GN=LOC111458459 PE=3 SV=1) HSP 1 Score: 407 bits (1047), Expect = 1.80e-143 Identity = 207/207 (100.00%), Postives = 207/207 (100.00%), Query Frame = 0
BLAST of Cp4.1LG01g16090.1 vs. ExPASy TrEMBL
Match: A0A6J1KEW7 (mitotic spindle checkpoint protein MAD2-like OS=Cucurbita maxima OX=3661 GN=LOC111493236 PE=3 SV=1) HSP 1 Score: 405 bits (1040), Expect = 2.10e-142 Identity = 206/207 (99.52%), Postives = 206/207 (99.52%), Query Frame = 0
BLAST of Cp4.1LG01g16090.1 vs. ExPASy TrEMBL
Match: A0A6J1FZG6 (mitotic spindle checkpoint protein MAD2-like OS=Cucurbita moschata OX=3662 GN=LOC111449324 PE=3 SV=1) HSP 1 Score: 403 bits (1035), Expect = 1.22e-141 Identity = 206/207 (99.52%), Postives = 206/207 (99.52%), Query Frame = 0
BLAST of Cp4.1LG01g16090.1 vs. ExPASy TrEMBL
Match: A0A0A0KPY5 (HORMA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G590170 PE=3 SV=1) HSP 1 Score: 398 bits (1022), Expect = 1.17e-139 Identity = 202/207 (97.58%), Postives = 205/207 (99.03%), Query Frame = 0
BLAST of Cp4.1LG01g16090.1 vs. TAIR 10
Match: AT3G25980.1 (DNA-binding HORMA family protein ) HSP 1 Score: 355.5 bits (911), Expect = 2.9e-98 Identity = 179/208 (86.06%), Postives = 194/208 (93.27%), Query Frame = 0
BLAST of Cp4.1LG01g16090.1 vs. TAIR 10
Match: AT3G25980.2 (DNA-binding HORMA family protein ) HSP 1 Score: 340.9 bits (873), Expect = 7.5e-94 Identity = 174/208 (83.65%), Postives = 190/208 (91.35%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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