Cp4.1LG01g15750.1 (mRNA) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG01g15750.1
Type	mRNA
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	plant intracellular Ras-group-related LRR protein 3
Location	Cp4.1LG01: 9367017 .. 9368584 (+)
Sequence length	621
RNA-Seq Expression	Cp4.1LG01g15750.1
Synteny	Cp4.1LG01g15750.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGTAATTAAAGTGAGTCTCAAATTCAAAACAAAACAACCCAAATTTTATAAATCAAAGTTTAATAGATTTTAGGATTCTATGTTTAAGAAATTTTCATCCTAAAAAGATACTTTCTAAATCTAGACTAAATAACTTTGCACTCCAAAGTCCAAATAACTTTATAGACTACATAATTTCAGAATTAATTATCTTAACTGGGTGTCTCAAACACCACCTTAAATCCTAACGATTTTACATGTTAAAGTTATGTCTTAAGTTCTTCGTTTTATACCTTTAGTTAAAGGTTTTATGTTCATCCCTACATGTTATCAATTTGGTTTTTTATGCATCAATAAATTTTTTTAATTCAGTCCCTTGGTGTTGGGGAATCTTAAAGGCAATTGATGTAAAATTGGAAGTGAACGAAAAAGTCATAAGAATTTTGAGAGAGGCTGAGACTATGAGTTTGGAAAATTTCGCCTATTGATCTAAAGCTTAATGTAGCGCACAATCAGCTGGAGGTAACTTTCATCTTCTAGCTCCTCTGTTTTTTAACATGGGTTCTATGAATTGGCTTAGTTGATCTAATACAGTCAATTGCTTTATAATTTTCCTAAACTGGGCTTCAGAAACTCCAGTGCCTTGATATTTCTTCGAATCTTTTGGAGTCACTTCCTGATTCTATCGGCCTATTGGCTAATTGAAGGTCGTCAACGTATCAGGAAACAAACTGAACTTCCTGAAACCCTACTGGTTGCAGGTAACTAAATCAGTAGTCTTTGGCTTCCTTTTCAACAGCACATGGAAAATGATGTTCACTGTGTTGAGTTTTGAATATTTTGATTACTTGGTGGGGTCTTCTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTACTGTAGTTCGTTGGTGGAGTTGGATGCAAGTTTCAACAATCTGCGAAGTTTACCTATAAGTATTTGGATATGGATTGGTTAATCTTGAATGGCTATCAATCCAGCTGAACAAGATATGTTACCTTCCTACATCGATGTCAGCTTAGGTCTCTAAGATTTGGCCTGCCCCGGCCATTGGAAGGTTAACGAGTCATGAGGTGTTGATTCTCAGTGGTAATTTCAACAACTTGACTGAGGTTACTGAACCAACTAGTGATCTCTGCAACCTAAGGGAGCTAGATCTTAGTGATAACCAGATAAGAGCTCTTCCAGACAGATTTGGCCGGCTGAAAAAACTAATCAAGTTGATTATGGATCAAAATCCGCGTCTGATTTCTCCAATGGAAATTGTTGACAAAGGGGCCCAAGCGGTGAAGGAATTCATGGACATTGGAAGGGCGATTTAGATGCAGAAAAACAGAAGGCCATGCATGAAGCAAACATGCCTGAAGATCAGAGTGGATGACTTACTTGGGGATCCTCCATGTTGTCTAACGTAACTTCTGGGGTTGTACAAACTATTTCTGAATATACAGGAGGAAGGAACGAAACTTCCAAGGACCCATGGTTGTATCAATAGTTGTGAGTGGTGGATCGTAT

mRNA sequence

ATGGATCAATTGCTTTATAATTTTCCTAAACTGGGCTTCAGAAACTCCAGTGCCTTGATATTTCTTCGAATCTTTTGGAGTCACTTCCTGATTCTATCGGCCTATTGGCTAATTGAAGGTCGTCAACGTATCAGGAAACAAACTGAACTTCCTGAAACCCTACTGGTTGCAGCTGAACAAGATATGTTACCTTCCTACATCGATGTCTCTAAGATTTGGCCTGCCCCGGCCATTGGAAGGTTAACGAGTCATGAGGTGTTGATTCTCAGTGGTAATTTCAACAACTTGACTGAGGTTACTGAACCAACTAGTGATCTCTGCAACCTAAGGGAGCTAGATCTTAGTGATAACCAGATAAGAGCTCTTCCAGACAGATTTGGCCGGCTGAAAAAACTAATCAAGTTGATTATGGATCAAAATCCGCGTCTGATTTCTCCAATGGAAATTGTTGACAAAGGGGCCCAAGCGATGCAGAAAAACAGAAGGCCATGCATGAAGCAAACATGCCTGAAGATCAGAGTGGATGACTTACTTGGGGATCCTCCATGTTGTCTAACGAGGAAGGAACGAAACTTCCAAGGACCCATGGTTGTATCAATAGTTGTGAGTGGTGGATCGTAT

Coding sequence (CDS)

ATGGATCAATTGCTTTATAATTTTCCTAAACTGGGCTTCAGAAACTCCAGTGCCTTGATATTTCTTCGAATCTTTTGGAGTCACTTCCTGATTCTATCGGCCTATTGGCTAATTGAAGGTCGTCAACGTATCAGGAAACAAACTGAACTTCCTGAAACCCTACTGGTTGCAGCTGAACAAGATATGTTACCTTCCTACATCGATGTCTCTAAGATTTGGCCTGCCCCGGCCATTGGAAGGTTAACGAGTCATGAGGTGTTGATTCTCAGTGGTAATTTCAACAACTTGACTGAGGTTACTGAACCAACTAGTGATCTCTGCAACCTAAGGGAGCTAGATCTTAGTGATAACCAGATAAGAGCTCTTCCAGACAGATTTGGCCGGCTGAAAAAACTAATCAAGTTGATTATGGATCAAAATCCGCGTCTGATTTCTCCAATGGAAATTGTTGACAAAGGGGCCCAAGCGATGCAGAAAAACAGAAGGCCATGCATGAAGCAAACATGCCTGAAGATCAGAGTGGATGACTTACTTGGGGATCCTCCATGTTGTCTAACGAGGAAGGAACGAAACTTCCAAGGACCCATGGTTGTATCAATAGTTGTGAGTGGTGGATCGTAT

Protein sequence

MDQLLYNFPKLGFRNSSALIFLRIFWSHFLILSAYWLIEGRQRIRKQTELPETLLVAAEQDMLPSYIDVSKIWPAPAIGRLTSHEVLILSGNFNNLTEVTEPTSDLCNLRELDLSDNQIRALPDRFGRLKKLIKLIMDQNPRLISPMEIVDKGAQAMQKNRRPCMKQTCLKIRVDDLLGDPPCCLTRKERNFQGPMVVSIVVSGGSY

Homology

[Close]

BLAST of Cp4.1LG01g15750.1 vs. ExPASy Swiss-Prot
Match: Q7XK44 (Plant intracellular Ras-group-related LRR protein 3 OS=Oryza sativa subsp. japonica OX=39947 GN=IRL3 PE=2 SV=3)

HSP 1 Score: 94.0 bits (232), Expect = 2.2e-18
Identity = 48/83 (57.83%), Postives = 63/83 (75.90%), Query Frame = 0


Query: 77  AIGRLTSHEVLILSGNFNNLTEVTEPTSDLCNLRELDLSDNQIRALPDRFGRLKKLIKLI 136
           AIG+L+S E+L LS NF++L ++     DL NLRELDLS+NQI ALPD FGRL KL KL 
Sbjct: 296 AIGKLSSLEILNLSSNFSDLKDLPASFGDLLNLRELDLSNNQIHALPDNFGRLDKLEKLN 355

Query: 137 MDQNPRLISPMEIVDKGAQAMQK 160
           ++QNP  + PMEIV+KG  A+++
Sbjct: 356 LEQNPLSMPPMEIVNKGVDAVKE 378

[Close]

BLAST of Cp4.1LG01g15750.1 vs. ExPASy Swiss-Prot
Match: Q8W4Q3 (Plant intracellular Ras-group-related LRR protein 3 OS=Arabidopsis thaliana OX=3702 GN=PIRL3 PE=2 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 3.7e-18
Identity = 49/86 (56.98%), Postives = 65/86 (75.58%), Query Frame = 0


Query: 77  AIGRLTSHEVLILSGNFNNLTEVTEPTSDLCNLRELDLSDNQIRALPDRFGRLKKLIKLI 136
           AIGRLT+ EV+ LS NF++L E+ +  SDL NLRELDLS+NQIR LPD F RL+KL KL 
Sbjct: 318 AIGRLTNLEVMNLSSNFSDLIELPDTISDLANLRELDLSNNQIRVLPDSFFRLEKLEKLN 377

Query: 137 MDQNPRLISPMEIVDKGAQAMQKNRR 163
           +DQNP    P E+V++ A+A+++  R
Sbjct: 378 LDQNPLEYPPQEMVNQSAEAVREFMR 403

[Close]

BLAST of Cp4.1LG01g15750.1 vs. ExPASy Swiss-Prot
Match: Q9LRV8 (Plant intracellular Ras-group-related LRR protein 2 OS=Arabidopsis thaliana OX=3702 GN=PIRL2 PE=2 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 1.8e-17
Identity = 48/86 (55.81%), Postives = 62/86 (72.09%), Query Frame = 0


Query: 77  AIGRLTSHEVLILSGNFNNLTEVTEPTSDLCNLRELDLSDNQIRALPDRFGRLKKLIKLI 136
           +IGRLT  EVL LS NFNNL  V +  +DL NLRELDLS+NQI+A+PD F RL+KL KL 
Sbjct: 317 SIGRLTKLEVLNLSSNFNNLMGVPDTITDLTNLRELDLSNNQIQAIPDSFYRLRKLEKLN 376

Query: 137 MDQNPRLISPMEIVDKGAQAMQKNRR 163
           +DQNP  I   E+  +GA+ +++  R
Sbjct: 377 LDQNPLEIPSQEVATQGAEVVREFMR 402

[Close]

BLAST of Cp4.1LG01g15750.1 vs. ExPASy Swiss-Prot
Match: Q6ZH85 (Plant intracellular Ras-group-related LRR protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=IRL2 PE=2 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 3.8e-15
Identity = 47/116 (40.52%), Postives = 71/116 (61.21%), Query Frame = 0


Query: 44  IRKQTELPETLLVAAEQDMLPSYIDVSKIWPAPAIGRLTSHEVLILSGNFNNLTEVTEPT 103
           + K   LP ++       +L ++ +  +  PA  IGRL + E L LS NF+++ ++    
Sbjct: 316 LNKLRSLPSSVCEMRSLRLLDAHFNQLRGLPA-GIGRLAALESLNLSSNFSDMRDLPASF 375

Query: 104 SDLCNLRELDLSDNQIRALPDRFGRLKKLIKLIMDQNPRLISPMEIVDKGAQAMQK 160
            DL  LRELDLS+NQI ALPD FGRL++L +L +DQNP  + P E+V  G  A+++
Sbjct: 376 GDLLGLRELDLSNNQIHALPDCFGRLQRLERLRLDQNPLAVPPKEVVAGGVGAVKE 430

[Close]

BLAST of Cp4.1LG01g15750.1 vs. ExPASy Swiss-Prot
Match: Q9FFJ3 (Plant intracellular Ras-group-related LRR protein 1 OS=Arabidopsis thaliana OX=3702 GN=PIRL1 PE=2 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 2.7e-13
Identity = 39/82 (47.56%), Postives = 56/82 (68.29%), Query Frame = 0


Query: 77  AIGRLTSHEVLILSGNFNNLTEVTEPTSDLCNLRELDLSDNQIRALPDRFGRLKKLIKLI 136
           + G LT+ E L LS NF++L ++     DL +L+ELDLS+NQI +LPD FG L  L KL 
Sbjct: 361 SFGLLTNLEYLNLSSNFSDLQDLPASFGDLISLQELDLSNNQIHSLPDAFGTLVNLTKLN 420

Query: 137 MDQNPRLISPMEIVDKGAQAMQ 159
           +DQNP ++ P E+V +G  A++
Sbjct: 421 LDQNPLVVPPDEVVKQGVDAVK 442

[Close]

BLAST of Cp4.1LG01g15750.1 vs. NCBI nr
Match: KAG7032311.1 (Plant intracellular Ras-group-related LRR protein 3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 201 bits (512), Expect = 2.37e-60
Identity = 113/167 (67.66%), Postives = 128/167 (76.65%), Query Frame = 0


Query: 11  LGFRNSSALIFLRIFWSHFLILSAYWLIEGRQRIRKQTELPETLLVAAE-------QDML 70
           + +RNSSALIFLRIFWSHFLILSAYWLIEGRQRIRKQTELPETLLVAA          + 
Sbjct: 147 ISWRNSSALIFLRIFWSHFLILSAYWLIEGRQRIRKQTELPETLLVAARWWSWMQVSTIC 206

Query: 71  PSYIDV------SKIWPAPAIGRLT------SHEVLILSGNFNNLTEVTEPTSDLCNLRE 130
            +Y+ V      +  W +  + ++       S +VLIL GNFNNLT+V E TSDLCNLRE
Sbjct: 207 EAYLQVFGYGLVNLEWLSIQLNKICYLPTSMSAKVLILRGNFNNLTDVPESTSDLCNLRE 266

Query: 131 LDLSDNQIRALPDRFGRLKKLIKLIMDQNPRLISPMEIVDKGAQAMQ 158
           LDLSDNQIR+L DRFGRLKKLIKLIMDQNPRLISPM IVDKGAQA++
Sbjct: 267 LDLSDNQIRSLLDRFGRLKKLIKLIMDQNPRLISPMGIVDKGAQAVK 313

[Close]

BLAST of Cp4.1LG01g15750.1 vs. NCBI nr
Match: KAG6601538.1 (Plant intracellular Ras-group-related LRR protein 3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 188 bits (477), Expect = 1.31e-56
Identity = 107/161 (66.46%), Postives = 120/161 (74.53%), Query Frame = 0


Query: 11  LGFRNSSALIFLRIFWSHFLILSAYWLIEGRQRIRKQTELPETLLVAAE-------QDML 70
           + +RNSSALIFLRIFWSHFLILSAYWLIEGRQRIRKQ ELPETLLVAA          + 
Sbjct: 36  ISWRNSSALIFLRIFWSHFLILSAYWLIEGRQRIRKQIELPETLLVAARWWSWMQVSTIC 95

Query: 71  PSYIDV------SKIWPAPAIGRLTSHEVLILSGNFNNLTEVTEPTSDLCNLRELDLSDN 130
            +Y+ V      +  W +  + ++      I  G FNNLTEV E TSDLCNLRELDLSDN
Sbjct: 96  EAYLQVFGYGLVNLEWLSIQLNKICYLPTSI--GKFNNLTEVPESTSDLCNLRELDLSDN 155

Query: 131 QIRALPDRFGRLKKLIKLIMDQNPRLISPMEIVDKGAQAMQ 158
           QIR+L DRF RLKKLIKLIMDQNPRLISPM IVDKGAQA++
Sbjct: 156 QIRSLLDRFRRLKKLIKLIMDQNPRLISPMGIVDKGAQAVK 194

[Close]

BLAST of Cp4.1LG01g15750.1 vs. NCBI nr
Match: XP_004135272.1 (plant intracellular Ras-group-related LRR protein 3 [Cucumis sativus] >XP_031742071.1 plant intracellular Ras-group-related LRR protein 3 [Cucumis sativus] >XP_031742072.1 plant intracellular Ras-group-related LRR protein 3 [Cucumis sativus] >XP_031742073.1 plant intracellular Ras-group-related LRR protein 3 [Cucumis sativus] >KGN51753.1 hypothetical protein Csa_009118 [Cucumis sativus])

HSP 1 Score: 134 bits (338), Expect = 4.49e-33
Identity = 67/83 (80.72%), Postives = 75/83 (90.36%), Query Frame = 0


Query: 76  PAIGRLTSHEVLILSGNFNNLTEVTEPTSDLCNLRELDLSDNQIRALPDRFGRLKKLIKL 135
           PAIGRLTS EVL LSGNFNNLTEV E  SDLCNL+ELDLSDNQI+ALPDRFGRL+KL++L
Sbjct: 350 PAIGRLTSLEVLNLSGNFNNLTEVPESMSDLCNLKELDLSDNQIKALPDRFGRLEKLLRL 409

Query: 136 IMDQNPRLISPMEIVDKGAQAMQ 158
            MDQNP +I PMEIVDKGAQA++
Sbjct: 410 NMDQNPLVIPPMEIVDKGAQAVK 432

[Close]

BLAST of Cp4.1LG01g15750.1 vs. NCBI nr
Match: XP_008446159.1 (PREDICTED: plant intracellular Ras-group-related LRR protein 3 [Cucumis melo] >KAA0034272.1 plant intracellular Ras-group-related LRR protein 3 [Cucumis melo var. makuwa] >TYK15648.1 plant intracellular Ras-group-related LRR protein 3 [Cucumis melo var. makuwa])

HSP 1 Score: 134 bits (337), Expect = 6.24e-33
Identity = 67/83 (80.72%), Postives = 75/83 (90.36%), Query Frame = 0


Query: 76  PAIGRLTSHEVLILSGNFNNLTEVTEPTSDLCNLRELDLSDNQIRALPDRFGRLKKLIKL 135
           PAIGRLTS EVL LSGNFNNLTEV E  SDLCNL+ELDLSDNQI+ALPDRFGRL+KL++L
Sbjct: 350 PAIGRLTSLEVLNLSGNFNNLTEVPESISDLCNLKELDLSDNQIKALPDRFGRLEKLMRL 409

Query: 136 IMDQNPRLISPMEIVDKGAQAMQ 158
            MDQNP +I PMEIVDKGAQA++
Sbjct: 410 NMDQNPLVIPPMEIVDKGAQAVK 432

[Close]

BLAST of Cp4.1LG01g15750.1 vs. NCBI nr
Match: XP_038891316.1 (plant intracellular Ras-group-related LRR protein 3 [Benincasa hispida])

HSP 1 Score: 132 bits (331), Expect = 4.16e-32
Identity = 67/83 (80.72%), Postives = 73/83 (87.95%), Query Frame = 0


Query: 76  PAIGRLTSHEVLILSGNFNNLTEVTEPTSDLCNLRELDLSDNQIRALPDRFGRLKKLIKL 135
           PAIGRLTS EVL LSGNFNNLTEV E  SDLCNL+ELDLSDNQIRALPD FGRL+KLI+L
Sbjct: 344 PAIGRLTSLEVLNLSGNFNNLTEVPESISDLCNLKELDLSDNQIRALPDTFGRLEKLIRL 403

Query: 136 IMDQNPRLISPMEIVDKGAQAMQ 158
            MDQNP +I PM IVDKGAQA++
Sbjct: 404 NMDQNPLVIPPMAIVDKGAQAVK 426

[Close]

BLAST of Cp4.1LG01g15750.1 vs. ExPASy TrEMBL
Match: A0A0A0KQ50 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G598610 PE=4 SV=1)

HSP 1 Score: 134 bits (338), Expect = 2.18e-33
Identity = 67/83 (80.72%), Postives = 75/83 (90.36%), Query Frame = 0


Query: 76  PAIGRLTSHEVLILSGNFNNLTEVTEPTSDLCNLRELDLSDNQIRALPDRFGRLKKLIKL 135
           PAIGRLTS EVL LSGNFNNLTEV E  SDLCNL+ELDLSDNQI+ALPDRFGRL+KL++L
Sbjct: 350 PAIGRLTSLEVLNLSGNFNNLTEVPESMSDLCNLKELDLSDNQIKALPDRFGRLEKLLRL 409

Query: 136 IMDQNPRLISPMEIVDKGAQAMQ 158
            MDQNP +I PMEIVDKGAQA++
Sbjct: 410 NMDQNPLVIPPMEIVDKGAQAVK 432

[Close]

BLAST of Cp4.1LG01g15750.1 vs. ExPASy TrEMBL
Match: A0A5A7ST38 (Plant intracellular Ras-group-related LRR protein 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G001450 PE=4 SV=1)

HSP 1 Score: 134 bits (337), Expect = 3.02e-33
Identity = 67/83 (80.72%), Postives = 75/83 (90.36%), Query Frame = 0


Query: 76  PAIGRLTSHEVLILSGNFNNLTEVTEPTSDLCNLRELDLSDNQIRALPDRFGRLKKLIKL 135
           PAIGRLTS EVL LSGNFNNLTEV E  SDLCNL+ELDLSDNQI+ALPDRFGRL+KL++L
Sbjct: 350 PAIGRLTSLEVLNLSGNFNNLTEVPESISDLCNLKELDLSDNQIKALPDRFGRLEKLMRL 409

Query: 136 IMDQNPRLISPMEIVDKGAQAMQ 158
            MDQNP +I PMEIVDKGAQA++
Sbjct: 410 NMDQNPLVIPPMEIVDKGAQAVK 432

[Close]

BLAST of Cp4.1LG01g15750.1 vs. ExPASy TrEMBL
Match: A0A1S3BED8 (plant intracellular Ras-group-related LRR protein 3 OS=Cucumis melo OX=3656 GN=LOC103488966 PE=4 SV=1)

HSP 1 Score: 134 bits (337), Expect = 3.02e-33
Identity = 67/83 (80.72%), Postives = 75/83 (90.36%), Query Frame = 0


Query: 76  PAIGRLTSHEVLILSGNFNNLTEVTEPTSDLCNLRELDLSDNQIRALPDRFGRLKKLIKL 135
           PAIGRLTS EVL LSGNFNNLTEV E  SDLCNL+ELDLSDNQI+ALPDRFGRL+KL++L
Sbjct: 350 PAIGRLTSLEVLNLSGNFNNLTEVPESISDLCNLKELDLSDNQIKALPDRFGRLEKLMRL 409

Query: 136 IMDQNPRLISPMEIVDKGAQAMQ 158
            MDQNP +I PMEIVDKGAQA++
Sbjct: 410 NMDQNPLVIPPMEIVDKGAQAVK 432

[Close]

BLAST of Cp4.1LG01g15750.1 vs. ExPASy TrEMBL
Match: A0A6J1G0C5 (plant intracellular Ras-group-related LRR protein 3-like OS=Cucurbita moschata OX=3662 GN=LOC111449534 PE=4 SV=1)

HSP 1 Score: 127 bits (319), Expect = 1.02e-30
Identity = 64/83 (77.11%), Postives = 71/83 (85.54%), Query Frame = 0


Query: 76  PAIGRLTSHEVLILSGNFNNLTEVTEPTSDLCNLRELDLSDNQIRALPDRFGRLKKLIKL 135
           P IGRLT+ EVLILSGNF N TEV E   DLCNLRELDLSDNQIRALPDRFGRL+KL+KL
Sbjct: 344 PDIGRLTNLEVLILSGNFYNFTEVPESICDLCNLRELDLSDNQIRALPDRFGRLEKLLKL 403

Query: 136 IMDQNPRLISPMEIVDKGAQAMQ 158
            MDQNP +I PM IVDKG+QA++
Sbjct: 404 NMDQNPLVIPPMTIVDKGSQAVK 426

[Close]

BLAST of Cp4.1LG01g15750.1 vs. ExPASy TrEMBL
Match: A0A6J1HQA1 (plant intracellular Ras-group-related LRR protein 3-like OS=Cucurbita maxima OX=3661 GN=LOC111466391 PE=4 SV=1)

HSP 1 Score: 124 bits (310), Expect = 1.83e-29
Identity = 62/83 (74.70%), Postives = 70/83 (84.34%), Query Frame = 0


Query: 76  PAIGRLTSHEVLILSGNFNNLTEVTEPTSDLCNLRELDLSDNQIRALPDRFGRLKKLIKL 135
           P IGRLT+ EVLILSGNF N TEV E   DLCNLRELDLSDNQIRALPDRFGRL+KL+KL
Sbjct: 340 PDIGRLTNLEVLILSGNFYNFTEVPESICDLCNLRELDLSDNQIRALPDRFGRLEKLLKL 399

Query: 136 IMDQNPRLISPMEIVDKGAQAMQ 158
            MDQNP +I P+ IVD+G QA++
Sbjct: 400 NMDQNPLVIPPIVIVDRGTQAVK 422

[Close]

BLAST of Cp4.1LG01g15750.1 vs. TAIR 10
Match: AT1G12970.1 (plant intracellular ras group-related LRR 3 )

HSP 1 Score: 93.2 bits (230), Expect = 2.6e-19
Identity = 49/86 (56.98%), Postives = 65/86 (75.58%), Query Frame = 0


Query: 77  AIGRLTSHEVLILSGNFNNLTEVTEPTSDLCNLRELDLSDNQIRALPDRFGRLKKLIKLI 136
           AIGRLT+ EV+ LS NF++L E+ +  SDL NLRELDLS+NQIR LPD F RL+KL KL 
Sbjct: 318 AIGRLTNLEVMNLSSNFSDLIELPDTISDLANLRELDLSNNQIRVLPDSFFRLEKLEKLN 377

Query: 137 MDQNPRLISPMEIVDKGAQAMQKNRR 163
           +DQNP    P E+V++ A+A+++  R
Sbjct: 378 LDQNPLEYPPQEMVNQSAEAVREFMR 403

[Close]

BLAST of Cp4.1LG01g15750.1 vs. TAIR 10
Match: AT3G26500.1 (plant intracellular ras group-related LRR 2 )

HSP 1 Score: 90.9 bits (224), Expect = 1.3e-18
Identity = 48/86 (55.81%), Postives = 62/86 (72.09%), Query Frame = 0


Query: 77  AIGRLTSHEVLILSGNFNNLTEVTEPTSDLCNLRELDLSDNQIRALPDRFGRLKKLIKLI 136
           +IGRLT  EVL LS NFNNL  V +  +DL NLRELDLS+NQI+A+PD F RL+KL KL 
Sbjct: 317 SIGRLTKLEVLNLSSNFNNLMGVPDTITDLTNLRELDLSNNQIQAIPDSFYRLRKLEKLN 376

Query: 137 MDQNPRLISPMEIVDKGAQAMQKNRR 163
           +DQNP  I   E+  +GA+ +++  R
Sbjct: 377 LDQNPLEIPSQEVATQGAEVVREFMR 402

[Close]

BLAST of Cp4.1LG01g15750.1 vs. TAIR 10
Match: AT5G05850.1 (plant intracellular ras group-related LRR 1 )

HSP 1 Score: 77.0 bits (188), Expect = 1.9e-14
Identity = 39/82 (47.56%), Postives = 56/82 (68.29%), Query Frame = 0


Query: 77  AIGRLTSHEVLILSGNFNNLTEVTEPTSDLCNLRELDLSDNQIRALPDRFGRLKKLIKLI 136
           + G LT+ E L LS NF++L ++     DL +L+ELDLS+NQI +LPD FG L  L KL 
Sbjct: 361 SFGLLTNLEYLNLSSNFSDLQDLPASFGDLISLQELDLSNNQIHSLPDAFGTLVNLTKLN 420

Query: 137 MDQNPRLISPMEIVDKGAQAMQ 159
           +DQNP ++ P E+V +G  A++
Sbjct: 421 LDQNPLVVPPDEVVKQGVDAVK 442

[Close]

BLAST of Cp4.1LG01g15750.1 vs. TAIR 10
Match: AT3G11330.1 (plant intracellular ras group-related LRR 9 )

HSP 1 Score: 75.1 bits (183), Expect = 7.4e-14
Identity = 38/78 (48.72%), Postives = 55/78 (70.51%), Query Frame = 0


Query: 81  LTSHEVLILSGNFNNLTEVTEPTSDLCNLRELDLSDNQIRALPDRFGRLKKLIKLIMDQN 140
           LT+ E L LS NF++L ++     +L +L+ELDLS+NQI ALPD FG L  L KL +DQN
Sbjct: 359 LTNLEYLNLSSNFSDLKDLPFSFGELISLQELDLSNNQIHALPDTFGTLDSLTKLNVDQN 418

Query: 141 PRLISPMEIVDKGAQAMQ 159
           P ++ P E+V +G +A++
Sbjct: 419 PLVVPPEEVVKEGVEAVK 436

[Close]

BLAST of Cp4.1LG01g15750.1 vs. TAIR 10
Match: AT4G26050.1 (plant intracellular ras group-related LRR 8 )

HSP 1 Score: 57.0 bits (136), Expect = 2.1e-08
Identity = 30/79 (37.97%), Postives = 50/79 (63.29%), Query Frame = 0


Query: 81  LTSHEVLILSGNFNNLTEVTEPTSDLCNLRELDLSDNQIRALPDRFGRLKKLIKLIMDQN 140
           L + +VL +S NF +LT +      L +L ELD+S N I  LPD  G L+++ KL ++ N
Sbjct: 219 LVNLQVLNVSQNFQHLTTLPYSVGLLISLVELDVSYNGITVLPDSLGCLRRIQKLSVEGN 278

Query: 141 PRLISPMEIVDKGAQAMQK 160
           P +  P E+V++G +A+++
Sbjct: 279 PLISPPFEVVEQGLEALKQ 297

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g15750.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q7XK44	2.2e-18	57.83	Plant intracellular Ras-group-related LRR protein 3 OS=Oryza sativa subsp. japon...	[more]
Q8W4Q3	3.7e-18	56.98	Plant intracellular Ras-group-related LRR protein 3 OS=Arabidopsis thaliana OX=3...	[more]
Q9LRV8	1.8e-17	55.81	Plant intracellular Ras-group-related LRR protein 2 OS=Arabidopsis thaliana OX=3...	[more]
Q6ZH85	3.8e-15	40.52	Plant intracellular Ras-group-related LRR protein 2 OS=Oryza sativa subsp. japon...	[more]
Q9FFJ3	2.7e-13	47.56	Plant intracellular Ras-group-related LRR protein 1 OS=Arabidopsis thaliana OX=3...	[more]

BLAST of Cp4.1LG01g15750.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7032311.1	2.37e-60	67.66	Plant intracellular Ras-group-related LRR protein 3, partial [Cucurbita argyrosp...	[more]
KAG6601538.1	1.31e-56	66.46	Plant intracellular Ras-group-related LRR protein 3, partial [Cucurbita argyrosp...	[more]
XP_004135272.1	4.49e-33	80.72	plant intracellular Ras-group-related LRR protein 3 [Cucumis sativus] >XP_031742...	[more]
XP_008446159.1	6.24e-33	80.72	PREDICTED: plant intracellular Ras-group-related LRR protein 3 [Cucumis melo] >K...	[more]
XP_038891316.1	4.16e-32	80.72	plant intracellular Ras-group-related LRR protein 3 [Benincasa hispida]	[more]

BLAST of Cp4.1LG01g15750.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KQ50	2.18e-33	80.72	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G598610 PE=4 SV=1	[more]
A0A5A7ST38	3.02e-33	80.72	Plant intracellular Ras-group-related LRR protein 3 OS=Cucumis melo var. makuwa ...	[more]
A0A1S3BED8	3.02e-33	80.72	plant intracellular Ras-group-related LRR protein 3 OS=Cucumis melo OX=3656 GN=L...	[more]
A0A6J1G0C5	1.02e-30	77.11	plant intracellular Ras-group-related LRR protein 3-like OS=Cucurbita moschata O...	[more]
A0A6J1HQA1	1.83e-29	74.70	plant intracellular Ras-group-related LRR protein 3-like OS=Cucurbita maxima OX=...	[more]

BLAST of Cp4.1LG01g15750.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G12970.1	2.6e-19	56.98	plant intracellular ras group-related LRR 3	[more]
AT3G26500.1	1.3e-18	55.81	plant intracellular ras group-related LRR 2	[more]
AT5G05850.1	1.9e-14	47.56	plant intracellular ras group-related LRR 1	[more]
AT3G11330.1	7.4e-14	48.72	plant intracellular ras group-related LRR 9	[more]
AT4G26050.1	2.1e-08	37.97	plant intracellular ras group-related LRR 8	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003591	Leucine-rich repeat, typical subtype	SMART	SM00369	LRR_typ_2	coord: 106..129 e-value: 4.5E-4 score: 29.5
IPR032675	Leucine-rich repeat domain superfamily	GENE3D	3.80.10.10	Ribonuclease Inhibitor	coord: 64..150 e-value: 3.2E-13 score: 51.3
None	No IPR available	PANTHER	PTHR45752	LEUCINE-RICH REPEAT-CONTAINING	coord: 76..159
None	No IPR available	PANTHER	PTHR45752:SF63	PLANT INTRACELLULAR RAS-GROUP-RELATED LRR PROTEIN 3	coord: 76..159
None	No IPR available	SUPERFAMILY	52058	L domain-like	coord: 70..142
IPR001611	Leucine-rich repeat	PROSITE	PS51450	LRR	coord: 108..130 score: 8.027684

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cp4.1LG01g15750	Cp4.1LG01g15750	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG01g15750.1:exon:001	Cp4.1LG01g15750.1:exon:001	exon
Cp4.1LG01g15750.1:exon:002	Cp4.1LG01g15750.1:exon:002	exon
Cp4.1LG01g15750.1:exon:003	Cp4.1LG01g15750.1:exon:003	exon
Cp4.1LG01g15750.1:exon:004	Cp4.1LG01g15750.1:exon:004	exon
Cp4.1LG01g15750.1:exon:005	Cp4.1LG01g15750.1:exon:005	exon
Cp4.1LG01g15750.1:exon:006	Cp4.1LG01g15750.1:exon:006	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG01g15750.1:cds:001	Cp4.1LG01g15750.1:cds:001	CDS
Cp4.1LG01g15750.1:cds:002	Cp4.1LG01g15750.1:cds:002	CDS
Cp4.1LG01g15750.1:cds:003	Cp4.1LG01g15750.1:cds:003	CDS
Cp4.1LG01g15750.1:cds:004	Cp4.1LG01g15750.1:cds:004	CDS
Cp4.1LG01g15750.1:cds:005	Cp4.1LG01g15750.1:cds:005	CDS
Cp4.1LG01g15750.1:cds:006	Cp4.1LG01g15750.1:cds:006	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG01g15750.1	Cp4.1LG01g15750.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006470	protein dephosphorylation
molecular_function	GO:0005515	protein binding
molecular_function	GO:0004722	protein serine/threonine phosphatase activity