Cp4.1LG01g09860.1 (mRNA) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG01g09860.1
Type	mRNA
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	dr1-associated corepressor-like
Location	Cp4.1LG01: 7036369 .. 7041551 (+)
Sequence length	1428
RNA-Seq Expression	Cp4.1LG01g09860.1
Synteny	Cp4.1LG01g09860.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTATGTTCTTATATCATAAATATATTTTATAGAGAGAACGATTTTAAAGATAAAATTACTATGAAATGCATTTTAAAAATTTAAAATTAACCATTTTTATTTAGAATAATTTTATATTTTGTGTATAGTTGATTTTTTAAAAAAAATAAATAAATAATAATGTGATTTTTTTATTGGTGAGAGGATATTCGATTTAGCCACCATTGCGCCTTTAGCTTTAGCAATATTCAAAGTACGAGTCCTTTACCTTTTCTATTAAAAGGGAAAAAATCAATTATAAAATTTGGAATAATAACACTGAATTTCACAAATTTTGAAATATACCCATATGGATCATCCTTGGAAATCGAGTCTCTTTGTAAGTTTCTTTCTCTTGAATTTTGTTTTTTTTTTTTTTTAATTTTAAAAAACACAGAAAACTAATTTATTTTAATTTTGGAACTTTCCTCATTTTAATTTTGAATGTAAGAACACGTTTAGTTTTTGCGTTTTTTTTAATTATTATTTTTAATTTTATTAAAAAAAAATTATATTTTCGGTACTTAAAATATTTTTTTTAGTCAATTTTATGTAATTACTCAATAAAAATACATTTTTATATTAAAAAATTGGTTAAATAATAAAAAACTTTTAAAATATATTTAGTTTTTTCCTCCTCTTCCTCGCTCTTCTTCGTTTTGAAGTTACTTGTAAAATTTGTGTTCCAGGTCATCAAATTGGGGTATTATTGTCTTTTCGGTCAGCAACGTCGAGCTACTTTTACAATATTTAGATTTCTGGGTTCCATTTCTAATTTCTTCATCGTAGAGCTATTTATGATAAAAACCCTAAATTTTCCTGGATCTGAGAATGCTTCGAAAGATTTCTGTGTTGATTGCTTATTGATAGCAATGGTAATCGAATTCTGCTGAAGCTTTGGCATTTTTCTGCTGTTGTTTCTTCGATTTTTTTATAGTTTTAATCCATTTGAATGTCTCGAATCTGACGCCATGAGGAAGAAGCTCGATACCCGCTTTCCTGCTGTAAGTTCGTTGTTTTTTTTCTCTTTTCATGGTTTTTACTTTCCATCGGTTTGATAATTCTGCTGTGTTTTTAGTAAATTGAAAGGGAAAATTGTTTTGTTTGTTCATTTCTTCTATGGCGAAGAGATCATGTCGTACAATTTCGTCCGGTGATTTGTGCACTCTCTTTCTAATTCTGTTTCCCCTCTTTCTTTCATCTGGTAGGTATCGTGCATCGTTTTGATGTATTCCTGATATGAAGGGTTTTTTTCATAAAAAAAGAGATGTATTTTTCCATTCATTTCTGTGTCAATTAAGCTAACTCTGCAGTTTTGTTCATCTGCAACTTGTCCTGCTCAGTTCATTGTATTAAACATTAATTAAGGATCCTTGGGATGAATTTAATCATTACATTTGACGCAGTAGTGCTCTTAAAGTTTTGTCCTGCGAGGGGGTAATGCATAGTGATTAGGGTTGCAAAAGTAGTGTTCTTTCTTTTAAAAATAAATCACTGGTCCTGCCAACAAAATGAAGCTACTAAAAGAGATAACAGATTAATTGTAACTATAGAGAGAGAACCCTTTGTAACAAGTTGCATGAACAGCTCAAGGGGAGGCAGGGTAGTGAGCATTGAACCTGGAATCCTCCCACTAGGTCTTCTTCTCCTAAATATACCCTCCTGTTCCTTTCTAACTAGACATACCATGACATACAGAAAAAGAGATACTTCAAGACAACATTTTGGTTAGTGAGTAAATTGTAACATTATTATTTGCCTTATGTTTTGTCCACATATTCTCTTCATTGTACTGAAACTATGACATCTTTTAGAAAGTTTTAACTGAAAATCCAATAACGGGACATCCCTCTTGATTTGAATTTGTAACTGCAAAACTAGTAGAAAACTACTGGATGGTAATTTTTTTTCCTATACAACAACCAATTTTCTACTTTGATCCTTTAAACGCTGGTTCCAGATAGACGTTTGTACCTTACATTTTTTATTTTTGAGGGGAAAGCTTGAGATTGACAAGAAACCCGGGTAATGATTAAATTGTGGGGCGCAAGGTGCTTCAACGCTCTGTATAATTGTTTTTGTAATTGCAATGCTTTGTTGATTTGTGTCAATTGGAGTAGTTTTTGTCTTTGCTTTAGGCTTTGAAAAGTTGATTCCTTGTCTTTTTGTACTGATGAATGTCTACATAATTTTTACTTGGACTCTTAGGTCTCTTATAAGATGTCTGTCAATTTGTTTTGTCAATCCTTAAAAACTTATCTTTTGACATGCATGAATCATGCATGTTGCTTTGAGTATTTATGATGACCTTTTCTTCTACAATATACACATTTCAGCTATCTTTTTCAAGCATAGAAACTCTAGAAATATGAGGTCTATGGATGATTAGTTCACATATTTTTTGGTTGGAAACCTTTTCTTCTTTTTATAGACAAAGATAGTGAAGATTTCTTTTTTTTTTTCAAATTTTAAATTTGGATGGGTCATGGTTTGCTTACTTTAAACTGATGAGGACAGAACATCTTGATGGTTTACATAATGGTTTATGATGAGTATTCTTTTTTTTTTTTATTATTATTTTTTTATGATATCACATCTTATCAAAGTTATTTATATTGGATTCTGATTTATAGGGAAAGATTTATTTTGAGAAATGGTCGGGTATAGTTTNCCTTTTGTATTTTTTTCATTAAATAAATAAAATAAAATGAATCTCAACATAGAATGCAAAGGGAACATTTTATTCACTTCCTAAGGGTGTTCTTCAACAATCTCTATTTTATTTCCATCTGTGGTCCGTCATTAAATAGTACTCAAATGATTTCTTGGAACCTTATGAAGAATTGTAGTTCAATATGTTATGAATTGATGTTAAATCACTGAATGAATTAAGACTCCATTGGTCTTGCTGTTGCCTTACCTTGTAGTCGTTGAGGATCAAAAGAGGCCCTCTTTTGGACATATTATGGCTTGGCTTTTACTTGATGATTTAAGTTGCTTTAGGGTTTTATGTTTTGGAAGGTTTATAAAAAACTTTCAAAGAGCTGAACTTTTTGAATAGATAATGGACTCACTTTCTTCAATTAAAGTGTGAATAAGCGTTCATTTCAATTGAACTTTAAACTTTCAATTGAATCCTTAAATCCGGTTAAGATTTTCAGTTTTTTGTTATCTGATTAATGATAAAATTTGGCAGGCACGAATTAAAAAGATAATGCAAGCAGATGAGGACGTGGGAAAGATAGCACTTGCAGTGCCCGTTTTAGTTTGTAAGCAAATCTTACAGAGTGTTTAATGTCATACGGTGTTCCGTTTAAGAAATATATGATTCCTAATGTATCTTGTACATGAATACCAGCTAAAGCATTGGAACTGTTCCTGCAAGACCTGTGTGATCGTACATATGAGATAACTCTACAAAGAGGAGCGAAGACAATGAACTCGTTGCACCTGTAAGGGCATATTTTAACCGACTTATTTTATTTATGTTTCGTGACAGCCGTGCCTTCAAACTCAGAAAATTTACAGTTTTTGTGTTTTAGATTTTTGGTTTGAACTTACCTTTAGCATCTAACTAGTTAATCCCTTGGGTTACTCTACCACCCTATTGGTAATTGGTATCAAATACTAGCTCTGTTTCCCCTTCCTTGTTTGTGTCCCCGAACTTGATTGTTATGTTTTTGGCCATCAATTTGTCTTAACATTATTTCTTAACTTTTATTACAGAAAGCACTGTGTACAAAGCTATAGTGTTTTCGATTTTCTGAGGGATATTGTTAGTCGGGTTCCAGATTATGGTCATGGTCATTCTGATGGTGCTGTTGATGATAGAAAGAGGAGGTATGATTTTCTTATTTTCATGTTCCTATTTTGTTAAGATCCATGGATAACTAAACGTTCTTAATATCTGATCAGGAAACCCCTTGCTGATGAAAGTAATGACATTGATGAGATGAAGAAGAGCAAGACGGTAATTATTCTTTCCTCCTAATGAAACGACTCGGTATTTATTTTCTTTGACGTGGACAGAAAAATCTAAGACCCAAGAAATAGTTGTTGTCGTTCTTGTGGTGTCATCAAATGCATAATGTTTATTGGACTGGAAAGATGAATCTCACTTAGAATGAGAAAGTGATTTGTTTCCTTTTTCTCCCCCAGCATGACATGAGCCATGGTAGCACTGGTAGAGGAAGAGGAAGGGGACGAGGACGGGGTCGTGGACGACCTGCTCGATCAGTCGAAAAGGACAACTTCCAACCTAACCCCGACGTCGACCCTTGCACATCTATAGAGAACACGAACAAGAATCCCAACCAAGATGTGCACATGGAGCCTCACATTGAGCCTAGTGAAACACCAAAAGAAGTTGGCGAAGACAATCAAACTATCCAAAACATCGATCTTAATGCCGATGTCAATGCCAGCAAAGACTCGAAGACTGTACCAGCAGCAATGTCAGATGTACCTGTAGAACCAGCCGAGCCTACTACTACCGAGTCCGAGGCTAAAGCAGCTGACGAATTCCCTGCCTGGCCTCTCTCTGATGTGGACAAAATGGCAATTGACCCTCTCCAATATGCACATCTCAGCACAAGAGTAGACGAGGAAGAGGAAGATTATGATGAAGAGGAGTAACCTGATCGGCGGTCCGGCCGGCCAGCCTTGAATGTGCTGAGAAAAACCTGTTAGTTGAAGCAAACTACATAGGAAGGGAGGAGGTCAGTTTAAAGTAGGCAAAGAAAATAAGAAGAATCAGAGATTGGAGTTCAATCTGTTACAATGGCCTATGTAGTTCATCATTTTCTGATTTTTTTTTTTCTTCTTCTTAATGTTCTAAGTAAATGATTTATCGATCTAACATTAGGTCTGTAGCTGTTGAAAAGTTATAGCTTGTTCATTATGTAATCCATGTGAAGAGAGTTAACCTTGGTGTAAGGGTAGGACTGTACTCTTTTTTTCTTTTTTCTTTTCCCTTGTTGGAAGCTGAAATATGCTAATTAATTTACTTAAGATAACCATATTTTAGTTGGTATTCCAACATTGAATTCCATGGGTGTTGTTGCCATTGCTCAAGATTGCATCGAATCAGAAGATGCATTGACCTTAAGACTTTATCATTAAATTGCCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT

mRNA sequence

ATGTATGTCATCAAATTGGGTTTTAATCCATTTGAATGTCTCGAATCTGACGCCATGAGGAAGAAGCTCGATACCCGCTTTCCTGCTGCACGAATTAAAAAGATAATGCAAGCAGATGAGGACGTGGGAAAGATAGCACTTGCAGTGCCCGTTTTAGTTTCTAAAGCATTGGAACTGTTCCTGCAAGACCTGTGTGATCGTACATATGAGATAACTCTACAAAGAGGAGCGAAGACAATGAACTCGTTGCACCTAAAGCACTGTGTACAAAGCTATAGTGTTTTCGATTTTCTGAGGGATATTGTTAGTCGGGTTCCAGATTATGGTCATGGTCATTCTGATGGTGCTGTTGATGATAGAAAGAGGAGGAAACCCCTTGCTGATGAAAGTAATGACATTGATGAGATGAAGAAGAGCAAGACGCATGACATGAGCCATGGTAGCACTGGTAGAGGAAGAGGAAGGGGACGAGGACGGGGTCGTGGACGACCTGCTCGATCAGTCGAAAAGGACAACTTCCAACCTAACCCCGACGTCGACCCTTGCACATCTATAGAGAACACGAACAAGAATCCCAACCAAGATGTGCACATGGAGCCTCACATTGAGCCTAGTGAAACACCAAAAGAAGTTGGCGAAGACAATCAAACTATCCAAAACATCGATCTTAATGCCGATGTCAATGCCAGCAAAGACTCGAAGACTGTACCAGCAGCAATGTCAGATGTACCTGTAGAACCAGCCGAGCCTACTACTACCGAGTCCGAGGCTAAAGCAGCTGACGAATTCCCTGCCTGGCCTCTCTCTGATGTGGACAAAATGGCAATTGACCCTCTCCAATATGCACATCTCAGCACAAGAGTAGACGAGGAAGAGGAAGATTATGATGAAGAGGAGTAACCTGATCGGCGGTCCGGCCGGCCAGCCTTGAATGTGCTGAGAAAAACCTGTTAGTTGAAGCAAACTACATAGGAAGGGAGGAGGTCAGTTTAAAGTAGGCAAAGAAAATAAGAAGAATCAGAGATTGGAGTTCAATCTGTTACAATGGCCTATGTAGTTCATCATTTTCTGATTTTTTTTTTTCTTCTTCTTAATGTTCTAAGTAAATGATTTATCGATCTAACATTAGGTCTGTAGCTGTTGAAAAGTTATAGCTTGTTCATTATGTAATCCATGTGAAGAGAGTTAACCTTGGTGTAAGGGTAGGACTGTACTCTTTTTTTCTTTTTTCTTTTCCCTTGTTGGAAGCTGAAATATGCTAATTAATTTACTTAAGATAACCATATTTTAGTTGGTATTCCAACATTGAATTCCATGGGTGTTGTTGCCATTGCTCAAGATTGCATCGAATCAGAAGATGCATTGACCTTAAGACTTTATCATTAAATTGCCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT

Coding sequence (CDS)

ATGTATGTCATCAAATTGGGTTTTAATCCATTTGAATGTCTCGAATCTGACGCCATGAGGAAGAAGCTCGATACCCGCTTTCCTGCTGCACGAATTAAAAAGATAATGCAAGCAGATGAGGACGTGGGAAAGATAGCACTTGCAGTGCCCGTTTTAGTTTCTAAAGCATTGGAACTGTTCCTGCAAGACCTGTGTGATCGTACATATGAGATAACTCTACAAAGAGGAGCGAAGACAATGAACTCGTTGCACCTAAAGCACTGTGTACAAAGCTATAGTGTTTTCGATTTTCTGAGGGATATTGTTAGTCGGGTTCCAGATTATGGTCATGGTCATTCTGATGGTGCTGTTGATGATAGAAAGAGGAGGAAACCCCTTGCTGATGAAAGTAATGACATTGATGAGATGAAGAAGAGCAAGACGCATGACATGAGCCATGGTAGCACTGGTAGAGGAAGAGGAAGGGGACGAGGACGGGGTCGTGGACGACCTGCTCGATCAGTCGAAAAGGACAACTTCCAACCTAACCCCGACGTCGACCCTTGCACATCTATAGAGAACACGAACAAGAATCCCAACCAAGATGTGCACATGGAGCCTCACATTGAGCCTAGTGAAACACCAAAAGAAGTTGGCGAAGACAATCAAACTATCCAAAACATCGATCTTAATGCCGATGTCAATGCCAGCAAAGACTCGAAGACTGTACCAGCAGCAATGTCAGATGTACCTGTAGAACCAGCCGAGCCTACTACTACCGAGTCCGAGGCTAAAGCAGCTGACGAATTCCCTGCCTGGCCTCTCTCTGATGTGGACAAAATGGCAATTGACCCTCTCCAATATGCACATCTCAGCACAAGAGTAGACGAGGAAGAGGAAGATTATGATGAAGAGGAGTAA

Protein sequence

MYVIKLGFNPFECLESDAMRKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKTMNSLHLKHCVQSYSVFDFLRDIVSRVPDYGHGHSDGAVDDRKRRKPLADESNDIDEMKKSKTHDMSHGSTGRGRGRGRGRGRGRPARSVEKDNFQPNPDVDPCTSIENTNKNPNQDVHMEPHIEPSETPKEVGEDNQTIQNIDLNADVNASKDSKTVPAAMSDVPVEPAEPTTTESEAKAADEFPAWPLSDVDKMAIDPLQYAHLSTRVDEEEEDYDEEE

Homology

[Close]

BLAST of Cp4.1LG01g09860.1 vs. ExPASy Swiss-Prot
Match: Q9D6N5 (Dr1-associated corepressor OS=Mus musculus OX=10090 GN=Drap1 PE=1 SV=3)

HSP 1 Score: 113.6 bits (283), Expect = 3.8e-24
Identity = 74/193 (38.34%), Postives = 102/193 (52.85%), Query Frame = 0


Query: 20  RKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKT 79
           +KK + RFP ARIKKIMQ DE++GK+A AVPV++S+ALELFL+ L  +  ++T  R AKT
Sbjct: 5   KKKYNARFPPARIKKIMQTDEEIGKVAAAVPVIISRALELFLESLLKKACQVTQSRNAKT 64

Query: 80  MNSLHLKHCVQSYSVFDFLRDIVSRVPD-YGHG---HSDGAVDDRKRRKPLADESNDIDE 139
           M + HLK C++    FDFL+D+V+ VPD  G G   H DG    R+ RKP          
Sbjct: 65  MTTSHLKQCIELEQQFDFLKDLVASVPDMQGDGEDNHVDGDKGPRRGRKP---------- 124

Query: 140 MKKSKTHDMSHGSTGRGRGRGRGRGRGRPARSVEKDNFQPNPDVDPCTSIENTNKNPNQD 199
                      GS+GR  G    +G+ +     + +    + D D     E T + P Q 
Sbjct: 125 -----------GSSGRKNGGTGSKGKDKKLSGTDSEQEDESEDTD-TDGEEETPQLPPQA 175

Query: 200 VHMEPHIEPSETP 209
            H   H +   TP
Sbjct: 185 SHPPAHFQSPPTP 175

[Close]

BLAST of Cp4.1LG01g09860.1 vs. ExPASy Swiss-Prot
Match: A0JPP1 (Dr1-associated corepressor OS=Rattus norvegicus OX=10116 GN=Drap1 PE=2 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 6.5e-24
Identity = 73/193 (37.82%), Postives = 102/193 (52.85%), Query Frame = 0


Query: 20  RKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKT 79
           +KK + RFP ARIKKIMQ DE++GK+A AVPV++S+ALELFL+ L  +  ++T  R AKT
Sbjct: 5   KKKYNARFPPARIKKIMQTDEEIGKVAAAVPVIISRALELFLESLLKKACQVTQSRNAKT 64

Query: 80  MNSLHLKHCVQSYSVFDFLRDIVSRVPD-YGHG---HSDGAVDDRKRRKPLADESNDIDE 139
           M + HLK C++    FDFL+D+V+ VPD  G G   H+DG    R+ RKP          
Sbjct: 65  MTTSHLKQCIELEQQFDFLKDLVASVPDMQGDGEDNHTDGDKGPRRGRKP---------- 124

Query: 140 MKKSKTHDMSHGSTGRGRGRGRGRGRGRPARSVEKDNFQPNPDVDPCTSIENTNKNPNQD 199
                      GS+GR  G    + + +     + +    + D D     E T + P Q 
Sbjct: 125 -----------GSSGRKNGGTGSKSKDKKLSGTDSEQEDESEDTD-TDGEEETPQAPPQA 175

Query: 200 VHMEPHIEPSETP 209
            H   H +   TP
Sbjct: 185 SHPPAHFQSPPTP 175

[Close]

BLAST of Cp4.1LG01g09860.1 vs. ExPASy Swiss-Prot
Match: Q14919 (Dr1-associated corepressor OS=Homo sapiens OX=9606 GN=DRAP1 PE=1 SV=3)

HSP 1 Score: 110.9 bits (276), Expect = 2.5e-23
Identity = 73/193 (37.82%), Postives = 101/193 (52.33%), Query Frame = 0


Query: 20  RKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKT 79
           +KK + RFP ARIKKIMQ DE++GK+A AVPV++S+ALELFL+ L  +  ++T  R AKT
Sbjct: 5   KKKYNARFPPARIKKIMQTDEEIGKVAAAVPVIISRALELFLESLLKKACQVTQSRNAKT 64

Query: 80  MNSLHLKHCVQSYSVFDFLRDIVSRVPD-YGHG---HSDGAVDDRKRRKPLADESNDIDE 139
           M + HLK C++    FDFL+D+V+ VPD  G G   H DG    R+ RKP          
Sbjct: 65  MTTSHLKQCIELEQQFDFLKDLVASVPDMQGDGEDNHMDGDKGARRGRKP---------- 124

Query: 140 MKKSKTHDMSHGSTGRGRGRGRGRGRGRPARSVEKDNFQPNPDVDPCTSIENTNKNPNQD 199
                      GS GR  G    + + +     + +    + D D     E T++ P Q 
Sbjct: 125 -----------GSGGRKNGGMGTKSKDKKLSGTDSEQEDESEDTD-TDGEEETSQPPPQA 175

Query: 200 VHMEPHIEPSETP 209
            H   H +   TP
Sbjct: 185 SHPSAHFQSPPTP 175

[Close]

BLAST of Cp4.1LG01g09860.1 vs. ExPASy Swiss-Prot
Match: Q2YDP3 (Dr1-associated corepressor OS=Bos taurus OX=9913 GN=DRAP1 PE=2 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 3.2e-23
Identity = 73/193 (37.82%), Postives = 101/193 (52.33%), Query Frame = 0


Query: 20  RKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKT 79
           +KK + RFP ARIKKIMQ DE++GK+A AVPV++S+ALELFL+ L  +  ++T  R AKT
Sbjct: 5   KKKYNARFPPARIKKIMQTDEEIGKVAAAVPVIISRALELFLESLLKKACQVTQSRNAKT 64

Query: 80  MNSLHLKHCVQSYSVFDFLRDIVSRVPD-YGHG---HSDGAVDDRKRRKPLADESNDIDE 139
           M + HLK C++    FDFL+D+V+ VPD  G G   H DG    R+ RK           
Sbjct: 65  MTTSHLKQCIELEQQFDFLKDLVASVPDMQGDGEDNHMDGDKGPRRGRK----------- 124

Query: 140 MKKSKTHDMSHGSTGRGRGRGRGRGRGRPARSVEKDNFQPNPDVDPCTSIENTNKNPNQD 199
                      GS+GR  G    +G+ +     + +    + D D     E T + P Q 
Sbjct: 125 ----------SGSSGRKNGGMGSKGKDKKLSGTDSEQEDESEDTD-SDGEEETPQVPPQA 175

Query: 200 VHMEPHIEPSETP 209
            H   H +   TP
Sbjct: 185 SHPPAHFQSPPTP 175

[Close]

BLAST of Cp4.1LG01g09860.1 vs. ExPASy Swiss-Prot
Match: Q54DA1 (Dr1-associated corepressor homolog OS=Dictyostelium discoideum OX=44689 GN=drap1 PE=3 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 2.2e-19
Identity = 73/212 (34.43%), Postives = 109/212 (51.42%), Query Frame = 0


Query: 19  MRKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAK 78
           M+KK  T+FP ARIKKIMQ DE+VGKIA A P+L+S+ LELF+ DL  +T +IT  +  K
Sbjct: 1   MKKKYKTKFPMARIKKIMQKDEEVGKIASATPILISQCLELFMADLVMKTCKITQAKKGK 60

Query: 79  TMNSLHLKHCVQSYSVFDFLRDIVSRVPDYGHGH---------SDGAVDDRKRRKPL--- 138
            ++  HLK C++  S FDFL +IV R+PD  +            DG  ++ +  + +   
Sbjct: 61  VISVNHLKECIKQESTFDFLTEIVDRIPDDKNEKRGRPKKTEGEDGGEEEEEEEEEMDMG 120

Query: 139 -------ADESNDIDEMKKSKTHDMSHGSTGRGRGRGRGRGRGRPARSVEKDNFQPNPDV 198
                   ++ +D DE ++        GS G G+G   GRG  R   S  K   + +P V
Sbjct: 121 EEEEEEEDEDDDDSDEEEEEAPKKGGKGSRG-GKGSRGGRGGARGGASTRKVKSETSP-V 180

Query: 199 DPCTSIENTNKNPNQDVHMEPHIEPSETPKEV 212
              T+I  T           P+   + +PK++
Sbjct: 181 LKNTTITTTTATTTPTPTPTPNF--ANSPKDI 208

[Close]

BLAST of Cp4.1LG01g09860.1 vs. NCBI nr
Match: KAG6601099.1 (Dr1-associated corepressor, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 568 bits (1464), Expect = 1.23e-202
Identity = 291/292 (99.66%), Postives = 291/292 (99.66%), Query Frame = 0


Query: 8   FNPFECLESDAMRKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDR 67
           FNPFECLESDAMRKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDR
Sbjct: 79  FNPFECLESDAMRKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDR 138

Query: 68  TYEITLQRGAKTMNSLHLKHCVQSYSVFDFLRDIVSRVPDYGHGHSDGAVDDRKRRKPLA 127
           TYEITLQRGAKTMNSLHLKHCVQSYSVFDFLRDIVSRVPDYGHGHSDGAVDDRKRRKPLA
Sbjct: 139 TYEITLQRGAKTMNSLHLKHCVQSYSVFDFLRDIVSRVPDYGHGHSDGAVDDRKRRKPLA 198

Query: 128 DESNDIDEMKKSKTHDMSHGSTGRGRGRGRGRGRGRPARSVEKDNFQPNPDVDPCTSIEN 187
           DESNDIDEMKKSKTHDMSHGSTGRGRGRGRGRGRGRPARSVEKDNFQPNPDVDPCTSIEN
Sbjct: 199 DESNDIDEMKKSKTHDMSHGSTGRGRGRGRGRGRGRPARSVEKDNFQPNPDVDPCTSIEN 258

Query: 188 TNKNPNQDVHMEPHIEPSETPKEVGEDNQTIQNIDLNADVNASKDSKTVPAAMSDVPVEP 247
           TNKNPNQDVHMEPHIEPSETPKEVGEDNQTIQNIDLNADVNASKDSKT PAAMSDVPVEP
Sbjct: 259 TNKNPNQDVHMEPHIEPSETPKEVGEDNQTIQNIDLNADVNASKDSKTAPAAMSDVPVEP 318

Query: 248 AEPTTTESEAKAADEFPAWPLSDVDKMAIDPLQYAHLSTRVDEEEEDYDEEE 299
           AEPTTTESEAKAADEFPAWPLSDVDKMAIDPLQYAHLSTRVDEEEEDYDEEE
Sbjct: 319 AEPTTTESEAKAADEFPAWPLSDVDKMAIDPLQYAHLSTRVDEEEEDYDEEE 370

[Close]

BLAST of Cp4.1LG01g09860.1 vs. NCBI nr
Match: XP_023515968.1 (dr1-associated corepressor-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 545 bits (1405), Expect = 4.55e-195
Identity = 281/281 (100.00%), Postives = 281/281 (100.00%), Query Frame = 0


Query: 19  MRKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAK 78
           MRKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAK
Sbjct: 1   MRKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAK 60

Query: 79  TMNSLHLKHCVQSYSVFDFLRDIVSRVPDYGHGHSDGAVDDRKRRKPLADESNDIDEMKK 138
           TMNSLHLKHCVQSYSVFDFLRDIVSRVPDYGHGHSDGAVDDRKRRKPLADESNDIDEMKK
Sbjct: 61  TMNSLHLKHCVQSYSVFDFLRDIVSRVPDYGHGHSDGAVDDRKRRKPLADESNDIDEMKK 120

Query: 139 SKTHDMSHGSTGRGRGRGRGRGRGRPARSVEKDNFQPNPDVDPCTSIENTNKNPNQDVHM 198
           SKTHDMSHGSTGRGRGRGRGRGRGRPARSVEKDNFQPNPDVDPCTSIENTNKNPNQDVHM
Sbjct: 121 SKTHDMSHGSTGRGRGRGRGRGRGRPARSVEKDNFQPNPDVDPCTSIENTNKNPNQDVHM 180

Query: 199 EPHIEPSETPKEVGEDNQTIQNIDLNADVNASKDSKTVPAAMSDVPVEPAEPTTTESEAK 258
           EPHIEPSETPKEVGEDNQTIQNIDLNADVNASKDSKTVPAAMSDVPVEPAEPTTTESEAK
Sbjct: 181 EPHIEPSETPKEVGEDNQTIQNIDLNADVNASKDSKTVPAAMSDVPVEPAEPTTTESEAK 240

Query: 259 AADEFPAWPLSDVDKMAIDPLQYAHLSTRVDEEEEDYDEEE 299
           AADEFPAWPLSDVDKMAIDPLQYAHLSTRVDEEEEDYDEEE
Sbjct: 241 AADEFPAWPLSDVDKMAIDPLQYAHLSTRVDEEEEDYDEEE 281

[Close]

BLAST of Cp4.1LG01g09860.1 vs. NCBI nr
Match: KAG7031901.1 (Dr1-associated corepressor [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 544 bits (1401), Expect = 1.85e-194
Identity = 280/281 (99.64%), Postives = 280/281 (99.64%), Query Frame = 0


Query: 19  MRKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAK 78
           MRKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAK
Sbjct: 1   MRKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAK 60

Query: 79  TMNSLHLKHCVQSYSVFDFLRDIVSRVPDYGHGHSDGAVDDRKRRKPLADESNDIDEMKK 138
           TMNSLHLKHCVQSYSVFDFLRDIVSRVPDYGHGHSDGAVDDRKRRKPLADESNDIDEMKK
Sbjct: 61  TMNSLHLKHCVQSYSVFDFLRDIVSRVPDYGHGHSDGAVDDRKRRKPLADESNDIDEMKK 120

Query: 139 SKTHDMSHGSTGRGRGRGRGRGRGRPARSVEKDNFQPNPDVDPCTSIENTNKNPNQDVHM 198
           SKTHDMSHGSTGRGRGRGRGRGRGRPARSVEKDNFQPNPDVDPCTSIENTNKNPNQDVHM
Sbjct: 121 SKTHDMSHGSTGRGRGRGRGRGRGRPARSVEKDNFQPNPDVDPCTSIENTNKNPNQDVHM 180

Query: 199 EPHIEPSETPKEVGEDNQTIQNIDLNADVNASKDSKTVPAAMSDVPVEPAEPTTTESEAK 258
           EPHIEPSETPKEVGEDNQTIQNIDLNADVNASKDSKT PAAMSDVPVEPAEPTTTESEAK
Sbjct: 181 EPHIEPSETPKEVGEDNQTIQNIDLNADVNASKDSKTAPAAMSDVPVEPAEPTTTESEAK 240

Query: 259 AADEFPAWPLSDVDKMAIDPLQYAHLSTRVDEEEEDYDEEE 299
           AADEFPAWPLSDVDKMAIDPLQYAHLSTRVDEEEEDYDEEE
Sbjct: 241 AADEFPAWPLSDVDKMAIDPLQYAHLSTRVDEEEEDYDEEE 281

[Close]

BLAST of Cp4.1LG01g09860.1 vs. NCBI nr
Match: XP_022957439.1 (dr1-associated corepressor-like [Cucurbita moschata])

HSP 1 Score: 540 bits (1391), Expect = 6.20e-193
Identity = 278/281 (98.93%), Postives = 279/281 (99.29%), Query Frame = 0


Query: 19  MRKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAK 78
           MRKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAK
Sbjct: 1   MRKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAK 60

Query: 79  TMNSLHLKHCVQSYSVFDFLRDIVSRVPDYGHGHSDGAVDDRKRRKPLADESNDIDEMKK 138
           TMNSLHLKHCVQSYSVFDFLRDIVSRVPDYGHGHSDGAVDDRKRRKPLADESNDIDEMKK
Sbjct: 61  TMNSLHLKHCVQSYSVFDFLRDIVSRVPDYGHGHSDGAVDDRKRRKPLADESNDIDEMKK 120

Query: 139 SKTHDMSHGSTGRGRGRGRGRGRGRPARSVEKDNFQPNPDVDPCTSIENTNKNPNQDVHM 198
           SKTHDMSHGSTGRGRGRGRGRGRGRPARSVEKDNFQPNPDVDPCTSIENTNKNPNQDVHM
Sbjct: 121 SKTHDMSHGSTGRGRGRGRGRGRGRPARSVEKDNFQPNPDVDPCTSIENTNKNPNQDVHM 180

Query: 199 EPHIEPSETPKEVGEDNQTIQNIDLNADVNASKDSKTVPAAMSDVPVEPAEPTTTESEAK 258
           EPHIEPSETPKEVG+DNQTIQNIDLNADVNASKDSKT PAA SDVPVEPAEPTTTESEAK
Sbjct: 181 EPHIEPSETPKEVGKDNQTIQNIDLNADVNASKDSKTAPAAKSDVPVEPAEPTTTESEAK 240

Query: 259 AADEFPAWPLSDVDKMAIDPLQYAHLSTRVDEEEEDYDEEE 299
           AADEFPAWPLSDVDKMAIDPLQYAHLSTRVDEEEEDYDEEE
Sbjct: 241 AADEFPAWPLSDVDKMAIDPLQYAHLSTRVDEEEEDYDEEE 281

[Close]

BLAST of Cp4.1LG01g09860.1 vs. NCBI nr
Match: XP_022989508.1 (dr1-associated corepressor-like [Cucurbita maxima])

HSP 1 Score: 531 bits (1369), Expect = 1.62e-189
Identity = 277/285 (97.19%), Postives = 279/285 (97.89%), Query Frame = 0


Query: 19  MRKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAK 78
           MRKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAK
Sbjct: 1   MRKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAK 60

Query: 79  TMNSLHLKHCVQSYSVFDFLRDIVSRVPDYGHGHSDGAVDDRKRRKPLADESNDIDEMKK 138
           TMNSLHLKHCVQSYSVFDFLRDIVSRVPDYGHGHSDGAVDDRKRRKPLADESNDIDE+KK
Sbjct: 61  TMNSLHLKHCVQSYSVFDFLRDIVSRVPDYGHGHSDGAVDDRKRRKPLADESNDIDELKK 120

Query: 139 SKTHDMSHGSTGRGRGRGRGRGRGRPARSVEKDNFQPNPDVDPCTSIENTN----KNPNQ 198
           SKTHDMSHGS+GRGRGRGRGRGRGRPARSVEKDNFQPNPDVDPCTSIENTN    KNPNQ
Sbjct: 121 SKTHDMSHGSSGRGRGRGRGRGRGRPARSVEKDNFQPNPDVDPCTSIENTNTNTNKNPNQ 180

Query: 199 DVHMEPHIEPSETPKEVGEDNQTIQNIDLNADVNASKDSKTVPAAMSDVPVEPAEPTTTE 258
           DVHMEPHIEPSETPKE GE NQTIQNIDLNADVNASKDSKTVPAAMSDVPVEPAEPTTTE
Sbjct: 181 DVHMEPHIEPSETPKEEGEANQTIQNIDLNADVNASKDSKTVPAAMSDVPVEPAEPTTTE 240

Query: 259 SEAKAADEFPAWPLSDVDKMAIDPLQYAHLSTRVDEEEEDYDEEE 299
           SEAKAADEFPAWPLSDVDKMAIDPLQYAHLSTRVDEEEEDYDEEE
Sbjct: 241 SEAKAADEFPAWPLSDVDKMAIDPLQYAHLSTRVDEEEEDYDEEE 285

[Close]

BLAST of Cp4.1LG01g09860.1 vs. ExPASy TrEMBL
Match: A0A6J1H1Y2 (dr1-associated corepressor-like OS=Cucurbita moschata OX=3662 GN=LOC111458835 PE=4 SV=1)

HSP 1 Score: 540 bits (1391), Expect = 3.00e-193
Identity = 278/281 (98.93%), Postives = 279/281 (99.29%), Query Frame = 0


Query: 19  MRKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAK 78
           MRKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAK
Sbjct: 1   MRKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAK 60

Query: 79  TMNSLHLKHCVQSYSVFDFLRDIVSRVPDYGHGHSDGAVDDRKRRKPLADESNDIDEMKK 138
           TMNSLHLKHCVQSYSVFDFLRDIVSRVPDYGHGHSDGAVDDRKRRKPLADESNDIDEMKK
Sbjct: 61  TMNSLHLKHCVQSYSVFDFLRDIVSRVPDYGHGHSDGAVDDRKRRKPLADESNDIDEMKK 120

Query: 139 SKTHDMSHGSTGRGRGRGRGRGRGRPARSVEKDNFQPNPDVDPCTSIENTNKNPNQDVHM 198
           SKTHDMSHGSTGRGRGRGRGRGRGRPARSVEKDNFQPNPDVDPCTSIENTNKNPNQDVHM
Sbjct: 121 SKTHDMSHGSTGRGRGRGRGRGRGRPARSVEKDNFQPNPDVDPCTSIENTNKNPNQDVHM 180

Query: 199 EPHIEPSETPKEVGEDNQTIQNIDLNADVNASKDSKTVPAAMSDVPVEPAEPTTTESEAK 258
           EPHIEPSETPKEVG+DNQTIQNIDLNADVNASKDSKT PAA SDVPVEPAEPTTTESEAK
Sbjct: 181 EPHIEPSETPKEVGKDNQTIQNIDLNADVNASKDSKTAPAAKSDVPVEPAEPTTTESEAK 240

Query: 259 AADEFPAWPLSDVDKMAIDPLQYAHLSTRVDEEEEDYDEEE 299
           AADEFPAWPLSDVDKMAIDPLQYAHLSTRVDEEEEDYDEEE
Sbjct: 241 AADEFPAWPLSDVDKMAIDPLQYAHLSTRVDEEEEDYDEEE 281

[Close]

BLAST of Cp4.1LG01g09860.1 vs. ExPASy TrEMBL
Match: A0A6J1JQH0 (dr1-associated corepressor-like OS=Cucurbita maxima OX=3661 GN=LOC111486562 PE=4 SV=1)

HSP 1 Score: 531 bits (1369), Expect = 7.83e-190
Identity = 277/285 (97.19%), Postives = 279/285 (97.89%), Query Frame = 0


Query: 19  MRKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAK 78
           MRKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAK
Sbjct: 1   MRKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAK 60

Query: 79  TMNSLHLKHCVQSYSVFDFLRDIVSRVPDYGHGHSDGAVDDRKRRKPLADESNDIDEMKK 138
           TMNSLHLKHCVQSYSVFDFLRDIVSRVPDYGHGHSDGAVDDRKRRKPLADESNDIDE+KK
Sbjct: 61  TMNSLHLKHCVQSYSVFDFLRDIVSRVPDYGHGHSDGAVDDRKRRKPLADESNDIDELKK 120

Query: 139 SKTHDMSHGSTGRGRGRGRGRGRGRPARSVEKDNFQPNPDVDPCTSIENTN----KNPNQ 198
           SKTHDMSHGS+GRGRGRGRGRGRGRPARSVEKDNFQPNPDVDPCTSIENTN    KNPNQ
Sbjct: 121 SKTHDMSHGSSGRGRGRGRGRGRGRPARSVEKDNFQPNPDVDPCTSIENTNTNTNKNPNQ 180

Query: 199 DVHMEPHIEPSETPKEVGEDNQTIQNIDLNADVNASKDSKTVPAAMSDVPVEPAEPTTTE 258
           DVHMEPHIEPSETPKE GE NQTIQNIDLNADVNASKDSKTVPAAMSDVPVEPAEPTTTE
Sbjct: 181 DVHMEPHIEPSETPKEEGEANQTIQNIDLNADVNASKDSKTVPAAMSDVPVEPAEPTTTE 240

Query: 259 SEAKAADEFPAWPLSDVDKMAIDPLQYAHLSTRVDEEEEDYDEEE 299
           SEAKAADEFPAWPLSDVDKMAIDPLQYAHLSTRVDEEEEDYDEEE
Sbjct: 241 SEAKAADEFPAWPLSDVDKMAIDPLQYAHLSTRVDEEEEDYDEEE 285

[Close]

BLAST of Cp4.1LG01g09860.1 vs. ExPASy TrEMBL
Match: A0A5A7SW18 (Dr1-associated corepressor OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G001170 PE=4 SV=1)

HSP 1 Score: 486 bits (1250), Expect = 9.50e-172
Identity = 249/282 (88.30%), Postives = 260/282 (92.20%), Query Frame = 0


Query: 19  MRKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAK 78
           MRKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAK
Sbjct: 1   MRKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAK 60

Query: 79  TMNSLHLKHCVQSYSVFDFLRDIVSRVPDYGHGHSDGAVDDRKRRKPLADESNDIDEMKK 138
           TMNSLHLKHCVQSYSVFDFLRDIV RVPDYGHGHSDGAVDDRKRRKPL DE ND DE+KK
Sbjct: 61  TMNSLHLKHCVQSYSVFDFLRDIVGRVPDYGHGHSDGAVDDRKRRKPLGDEGNDFDELKK 120

Query: 139 SKTHDMSHGSTGRGRGRGRGRGRGRPARSVEKDNFQPNPDVDPCTSIENTNKNPNQDVHM 198
           SK HDMSHGSTGRGRGRGRGRGRGRPARS E+DN+QPNPDVDPCTSIEN NKNPN DVHM
Sbjct: 121 SKMHDMSHGSTGRGRGRGRGRGRGRPARSAERDNYQPNPDVDPCTSIENRNKNPNPDVHM 180

Query: 199 EPHIEPSETPKEVGEDNQTIQNIDLNADVNASKDSKTVPAA-MSDVPVEPAEPTTTESEA 258
           E H+EP +TPKEV E NQ IQN DLNADV+ ++DSKTVPAA +SD P+EPA PTTTESE 
Sbjct: 181 EHHVEPGDTPKEVSEANQAIQNFDLNADVSTNEDSKTVPAAAVSDAPIEPAAPTTTESET 240

Query: 259 KAADEFPAWPLSDVDKMAIDPLQYAHLSTRVDEEEEDYDEEE 299
           KA DEF AWPLSDVDKMAIDPLQY HLS+RVDEEEEDYDEEE
Sbjct: 241 KAVDEFHAWPLSDVDKMAIDPLQYTHLSSRVDEEEEDYDEEE 282

[Close]

BLAST of Cp4.1LG01g09860.1 vs. ExPASy TrEMBL
Match: A0A1S3BDV9 (dr1-associated corepressor OS=Cucumis melo OX=3656 GN=LOC103488818 PE=4 SV=1)

HSP 1 Score: 486 bits (1250), Expect = 9.50e-172
Identity = 249/282 (88.30%), Postives = 260/282 (92.20%), Query Frame = 0


Query: 19  MRKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAK 78
           MRKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAK
Sbjct: 1   MRKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAK 60

Query: 79  TMNSLHLKHCVQSYSVFDFLRDIVSRVPDYGHGHSDGAVDDRKRRKPLADESNDIDEMKK 138
           TMNSLHLKHCVQSYSVFDFLRDIV RVPDYGHGHSDGAVDDRKRRKPL DE ND DE+KK
Sbjct: 61  TMNSLHLKHCVQSYSVFDFLRDIVGRVPDYGHGHSDGAVDDRKRRKPLGDEGNDFDELKK 120

Query: 139 SKTHDMSHGSTGRGRGRGRGRGRGRPARSVEKDNFQPNPDVDPCTSIENTNKNPNQDVHM 198
           SK HDMSHGSTGRGRGRGRGRGRGRPARS E+DN+QPNPDVDPCTSIEN NKNPN DVHM
Sbjct: 121 SKMHDMSHGSTGRGRGRGRGRGRGRPARSAERDNYQPNPDVDPCTSIENRNKNPNPDVHM 180

Query: 199 EPHIEPSETPKEVGEDNQTIQNIDLNADVNASKDSKTVPAA-MSDVPVEPAEPTTTESEA 258
           E H+EP +TPKEV E NQ IQN DLNADV+ ++DSKTVPAA +SD P+EPA PTTTESE 
Sbjct: 181 EHHVEPGDTPKEVSEANQAIQNFDLNADVSTNEDSKTVPAAAVSDAPIEPAAPTTTESET 240

Query: 259 KAADEFPAWPLSDVDKMAIDPLQYAHLSTRVDEEEEDYDEEE 299
           KA DEF AWPLSDVDKMAIDPLQY HLS+RVDEEEEDYDEEE
Sbjct: 241 KAVDEFHAWPLSDVDKMAIDPLQYTHLSSRVDEEEEDYDEEE 282

[Close]

BLAST of Cp4.1LG01g09860.1 vs. ExPASy TrEMBL
Match: A0A0A0KPQ2 (CBFD_NFYB_HMF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G583350 PE=4 SV=1)

HSP 1 Score: 484 bits (1246), Expect = 4.01e-171
Identity = 251/283 (88.69%), Postives = 262/283 (92.58%), Query Frame = 0


Query: 19  MRKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAK 78
           MRKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAK
Sbjct: 1   MRKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAK 60

Query: 79  TMNSLHLKHCVQSYSVFDFLRDIVSRVPDYGHGHSDGAVDDRKRRKPLADESNDIDEMKK 138
           TMNSLHLKHCVQSYSVFDFLRDIV RVPDYGHGHSDGAVDDRKRRKPL DE ND DE+KK
Sbjct: 61  TMNSLHLKHCVQSYSVFDFLRDIVGRVPDYGHGHSDGAVDDRKRRKPLGDEGNDFDELKK 120

Query: 139 SKTHDMSHGSTGRGRGRGRGRGRGRPARSVEKDNFQPNPDVDPCTSIENTNKNPNQDVHM 198
           SK HDMSH STGRGRGRGRGRGRGRPARS E+DN+QPNPDVDPCTSIEN NKNPN DVHM
Sbjct: 121 SKMHDMSHVSTGRGRGRGRGRGRGRPARSAERDNYQPNPDVDPCTSIENRNKNPNPDVHM 180

Query: 199 EPHIEPSETPKEVGEDNQTIQNIDLNADVNASKDSKTVPAA-MSDVPVEPAEPTTT-ESE 258
           E H+EPS+TPKEV E NQ IQN DLNADV+ ++DSKTVPAA +SD P+EPA PTTT ESE
Sbjct: 181 EHHVEPSDTPKEVSEANQAIQNFDLNADVSTNEDSKTVPAAAVSDAPIEPAAPTTTTESE 240

Query: 259 AKAADEFPAWPLSDVDKMAIDPLQYAHLSTRVDEEEEDYDEEE 299
            KAADEFPAWPLSDVDKMAIDPLQY HLS+RVDEEEEDYDEEE
Sbjct: 241 TKAADEFPAWPLSDVDKMAIDPLQYTHLSSRVDEEEEDYDEEE 283

[Close]

BLAST of Cp4.1LG01g09860.1 vs. TAIR 10
Match: AT3G12480.1 (nuclear factor Y, subunit C11 )

HSP 1 Score: 253.1 bits (645), Expect = 2.9e-67
Identity = 158/298 (53.02%), Postives = 196/298 (65.77%), Query Frame = 0


Query: 19  MRKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAK 78
           MRKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSK+LELFLQDLCDRTYEITL+RGAK
Sbjct: 1   MRKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKSLELFLQDLCDRTYEITLERGAK 60

Query: 79  TMNSLHLKHCVQSYSVFDFLRDIVSRVPDYGH----GHSDGAVDDR---KRRKPLADESN 138
           T++SLHLKHCV+ Y+VFDFLR++VS+VPDYGH    GH D  +DDR   KRRKP++DE N
Sbjct: 61  TVSSLHLKHCVERYNVFDFLREVVSKVPDYGHSQGQGHGDVTMDDRSISKRRKPISDEVN 120

Query: 139 DID-EMKKSKTHDMSHGST----GRGRGRGRGRGRGRPARSVEKDNFQPNPDVDPCTSIE 198
           D D E KKSKT ++    T    GRGRGRGRGRG GR A++ E++      +V+   S  
Sbjct: 121 DSDEEYKKSKTQEIGSAKTSGRGGRGRGRGRGRG-GRAAKAAEREGLNREMEVEAANS-- 180

Query: 199 NTNKNPNQDVHMEPHIEPSETPKEVGEDNQTIQNIDLNADVNASK-----DSKTVPAAMS 258
                P  +V M       +  ++ G D     N D    + + K     D       ++
Sbjct: 181 -GQPPPEDNVKMHASESSPQEDEKKGIDGTAASNEDTKQHLQSPKEGIDFDLNAESLDLN 240

Query: 259 DVPVEPAEPTTTESEAKA-ADEFPAWPLSDVDKMAIDPLQYAHLSTRVDEEEEDYDEE 299
           +  + PA  TTT + A   ++E+  WP+ D+ KM  DP Q A L  R+DE+EEDYDEE
Sbjct: 241 ETKLAPATGTTTTTTAATDSEEYSGWPMMDISKM--DPAQLASLGKRIDEDEEDYDEE 292

[Close]

BLAST of Cp4.1LG01g09860.1 vs. TAIR 10
Match: AT5G19490.1 (Histone superfamily protein )

HSP 1 Score: 172.2 bits (435), Expect = 6.4e-43
Identity = 118/291 (40.55%), Postives = 166/291 (57.04%), Query Frame = 0


Query: 19  MRKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAK 78
           M+KKL TRFPA RIKKIMQ DE+VGKIA+AVP+LVSKALELFLQDLC+ TY++TL RGAK
Sbjct: 1   MKKKLQTRFPATRIKKIMQTDEEVGKIAMAVPLLVSKALELFLQDLCNHTYDVTLSRGAK 60

Query: 79  TMNSLHLKHCVQSYSVFDFLRDIVSRVPDYGHGHSDGAVDDRKRRKPLADESNDIDEMKK 138
           T+N+ HLK CVQ+ +VFDFLRD V++VPD G   ++     ++R+       ND D +K 
Sbjct: 61  TVNAFHLKQCVQATNVFDFLRDTVAKVPDLGGSDTEDQSATKRRKVVDGSSCNDEDMIKT 120

Query: 139 SKTHDMSHGSTGRG-RGRGRGRGRGRPARSV----EKDNFQPNPDVDPCTSIENTNKNPN 198
           ++ H++ H S GRG RGRGRGR  GR    +    E+D    +P+     S EN + + +
Sbjct: 121 TQMHEVKHTSCGRGRRGRGRGRSSGRTGSGLSLKFEEDLEDGSPESSRTPSPENGSLSHD 180

Query: 199 QD------VHMEPHIEPSETPKEVGEDNQTIQNIDLNADVNASKDSKTVPAAMSDVPVEP 258
                    H   H   SE           ++N DLN +++ + D+              
Sbjct: 181 DTSWKKVASHNNHHSSNSEV---------KVRNFDLNVELDENGDN-------------- 240

Query: 259 AEPTTTESEAKAADEFPAWPLSDVDKMAIDPLQYAHLSTRVDEEEEDYDEE 299
              T  E++ + + ++P     ++++M IDP      S     +EEDYDEE
Sbjct: 241 --ATWLETQLERSPDYPL----EINEMKIDPDDQQQASA---SDEEDYDEE 259

[Close]

BLAST of Cp4.1LG01g09860.1 vs. TAIR 10
Match: AT1G56170.1 (nuclear factor Y, subunit C2 )

HSP 1 Score: 61.6 bits (148), Expect = 1.2e-09
Identity = 35/92 (38.04%), Postives = 53/92 (57.61%), Query Frame = 0


Query: 28  PAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKTMNSLHLKH 87
           P ARIKKIM+ADEDV  I+   PV+ +KA E+F+ +L  R +  T +   +T+    +  
Sbjct: 78  PLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRAWIHTEENKRRTLQKNDIAA 137

Query: 88  CVQSYSVFDFLRDIVSR--VPDYGHGHSDGAV 118
            +    VFDFL DI+ R  + + G G + G +
Sbjct: 138 AISRTDVFDFLVDIIPRDELKEEGLGVTKGTI 169

[Close]

BLAST of Cp4.1LG01g09860.1 vs. TAIR 10
Match: AT1G56170.2 (nuclear factor Y, subunit C2 )

HSP 1 Score: 61.6 bits (148), Expect = 1.2e-09
Identity = 35/92 (38.04%), Postives = 53/92 (57.61%), Query Frame = 0


Query: 28  PAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKTMNSLHLKH 87
           P ARIKKIM+ADEDV  I+   PV+ +KA E+F+ +L  R +  T +   +T+    +  
Sbjct: 78  PLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRAWIHTEENKRRTLQKNDIAA 137

Query: 88  CVQSYSVFDFLRDIVSR--VPDYGHGHSDGAV 118
            +    VFDFL DI+ R  + + G G + G +
Sbjct: 138 AISRTDVFDFLVDIIPRDELKEEGLGVTKGTI 169

[Close]

BLAST of Cp4.1LG01g09860.1 vs. TAIR 10
Match: AT1G08970.4 (nuclear factor Y, subunit C9 )

HSP 1 Score: 60.8 bits (146), Expect = 2.1e-09
Identity = 32/77 (41.56%), Postives = 47/77 (61.04%), Query Frame = 0


Query: 28  PAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKTMNSLHLKH 87
           P ARIKKIM+ADEDV  I+   PV+ ++A E+F+ +L  R++  T +   +T+    +  
Sbjct: 82  PLARIKKIMKADEDVRMISAEAPVVFARACEMFILELTLRSWNHTEENKRRTLQKNDIAA 141

Query: 88  CVQSYSVFDFLRDIVSR 105
            V    +FDFL DIV R
Sbjct: 142 AVTRTDIFDFLVDIVPR 158

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g09860.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9D6N5	3.8e-24	38.34	Dr1-associated corepressor OS=Mus musculus OX=10090 GN=Drap1 PE=1 SV=3	[more]
A0JPP1	6.5e-24	37.82	Dr1-associated corepressor OS=Rattus norvegicus OX=10116 GN=Drap1 PE=2 SV=1	[more]
Q14919	2.5e-23	37.82	Dr1-associated corepressor OS=Homo sapiens OX=9606 GN=DRAP1 PE=1 SV=3	[more]
Q2YDP3	3.2e-23	37.82	Dr1-associated corepressor OS=Bos taurus OX=9913 GN=DRAP1 PE=2 SV=1	[more]
Q54DA1	2.2e-19	34.43	Dr1-associated corepressor homolog OS=Dictyostelium discoideum OX=44689 GN=drap1...	[more]

BLAST of Cp4.1LG01g09860.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6601099.1	1.23e-202	99.66	Dr1-associated corepressor, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023515968.1	4.55e-195	100.00	dr1-associated corepressor-like [Cucurbita pepo subsp. pepo]	[more]
KAG7031901.1	1.85e-194	99.64	Dr1-associated corepressor [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022957439.1	6.20e-193	98.93	dr1-associated corepressor-like [Cucurbita moschata]	[more]
XP_022989508.1	1.62e-189	97.19	dr1-associated corepressor-like [Cucurbita maxima]	[more]

BLAST of Cp4.1LG01g09860.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H1Y2	3.00e-193	98.93	dr1-associated corepressor-like OS=Cucurbita moschata OX=3662 GN=LOC111458835 PE...	[more]
A0A6J1JQH0	7.83e-190	97.19	dr1-associated corepressor-like OS=Cucurbita maxima OX=3661 GN=LOC111486562 PE=4...	[more]
A0A5A7SW18	9.50e-172	88.30	Dr1-associated corepressor OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaff...	[more]
A0A1S3BDV9	9.50e-172	88.30	dr1-associated corepressor OS=Cucumis melo OX=3656 GN=LOC103488818 PE=4 SV=1	[more]
A0A0A0KPQ2	4.01e-171	88.69	CBFD_NFYB_HMF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G5833...	[more]

BLAST of Cp4.1LG01g09860.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G12480.1	2.9e-67	53.02	nuclear factor Y, subunit C11	[more]
AT5G19490.1	6.4e-43	40.55	Histone superfamily protein	[more]
AT1G56170.1	1.2e-09	38.04	nuclear factor Y, subunit C2	[more]
AT1G56170.2	1.2e-09	38.04	nuclear factor Y, subunit C2	[more]
AT1G08970.4	2.1e-09	41.56	nuclear factor Y, subunit C9	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 281..299
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 196..210
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 108..213
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 108..150
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 225..264
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 177..195
None	No IPR available	PANTHER	PTHR10252:SF98	HISTONE SUPERFAMILY PROTEIN	coord: 19..298
None	No IPR available	PANTHER	PTHR10252	HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED	coord: 19..298
IPR009072	Histone-fold	GENE3D	1.10.20.10	Histone, subunit A	coord: 13..104 e-value: 6.3E-30 score: 105.5
IPR009072	Histone-fold	SUPERFAMILY	47113	Histone-fold	coord: 22..107
IPR003958	Transcription factor CBF/NF-Y/archaeal histone domain	PFAM	PF00808	CBFD_NFYB_HMF	coord: 26..89 e-value: 2.2E-19 score: 69.4

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cp4.1LG01g09860	Cp4.1LG01g09860	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG01g09860.1:exon:001	Cp4.1LG01g09860.1:exon:001	exon
Cp4.1LG01g09860.1:exon:002	Cp4.1LG01g09860.1:exon:002	exon
Cp4.1LG01g09860.1:exon:003	Cp4.1LG01g09860.1:exon:003	exon
Cp4.1LG01g09860.1:exon:004	Cp4.1LG01g09860.1:exon:004	exon
Cp4.1LG01g09860.1:exon:005	Cp4.1LG01g09860.1:exon:005	exon
Cp4.1LG01g09860.1:exon:006	Cp4.1LG01g09860.1:exon:006	exon
Cp4.1LG01g09860.1:exon:007	Cp4.1LG01g09860.1:exon:007	exon
Cp4.1LG01g09860.1:exon:008	Cp4.1LG01g09860.1:exon:008	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG01g09860.1:cds:008	Cp4.1LG01g09860.1:cds:008	CDS
Cp4.1LG01g09860.1:cds:007	Cp4.1LG01g09860.1:cds:007	CDS
Cp4.1LG01g09860.1:cds:006	Cp4.1LG01g09860.1:cds:006	CDS
Cp4.1LG01g09860.1:cds:005	Cp4.1LG01g09860.1:cds:005	CDS
Cp4.1LG01g09860.1:cds:004	Cp4.1LG01g09860.1:cds:004	CDS
Cp4.1LG01g09860.1:cds:003	Cp4.1LG01g09860.1:cds:003	CDS
Cp4.1LG01g09860.1:cds:002	Cp4.1LG01g09860.1:cds:002	CDS
Cp4.1LG01g09860.1:cds:001	Cp4.1LG01g09860.1:cds:001	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG01g09860.1:three_prime_utr:001	Cp4.1LG01g09860.1:three_prime_utr:001	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG01g09860.1	Cp4.1LG01g09860.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046982	protein heterodimerization activity
molecular_function	GO:0000976	transcription cis-regulatory region binding