Cp4.1LG01g03290.1 (mRNA) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG01g03290.1
Type	mRNA
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	ERAD-associated E3 ubiquitin-protein ligase HRD1B-like
Location	Cp4.1LG01: 1971042 .. 1987109 (+)
Sequence length	3566
RNA-Seq Expression	Cp4.1LG01g03290.1
Synteny	Cp4.1LG01g03290.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGTCTTTGAAAGAGGAGCCCTAACTTTGAATTCCATCTTGGTTCTGCATCAGCTTTCATGATTCTGCAATTTTTCGTGTTCGTCTCATCTTCATCGACTTCCAACTGGATTGCCGCCTAGATCTACCCGGGCATAGATAGCCATAGTCGCCGATCAAACAGGCAAGATTTCAATTCGAAAAACAACTTTTTTTTGTTGATGTTTGTGGATTTGCTCGGTCAATTGGGTTTGTAACACCAGGATTACGGGTTTCTGGTTTACCAAGTTTAGTCAGACCATGTTGCAAATACATTACATTGTCCGCGTCGAGAAAGAACAAATGTTAGCGCTGGAAAAATTGTAGGAAAATGCCTTGCCCGGCTGGTGTTATCGAATGTAGGGATGGTATTGATGAACTCAACATAGATCATAGGGAATTAATTCACTTCTGCAAACCTTAGGATGATTAATCTCAGTCGAATTTGCATGCATTTGTCGCGTGGATAAGACAAAACAGCGTGTATTTTGCCTGATTTTCTAATGATCAGTGCTTTTGGGCTTTGAGTGGGAATTGGGACCTGGAACTTTTTGGCATTATGTAAACGGAGGGAACCGGGTTGCTAAAATGGGTACATCTCATTCGTAAAGCTTCCTATATTTTATAGTTAAACTCATAGAGCTTTGACCTAGAGCTTGGGTTGGCCTCCATCTCCCTTTTTATTGGCCATCTTTTGGAAAATTCGATGGTGTATTAGAAATCTGAACATCTTAATTTATTAACTTCACATTGCCAAATCAATTATAATTCTCTTTTTGGGGAACCTAAGGGAGCCTTTGAAGCATTTAAAATTGAATTTCTCCCTCAAGCTATGAGGATCTTCCAGGAAGCATTGCATAAATATGCACACGATATGGGGGATGCAGAGGTCTCAAGTTCACTTATCTTCAATAATCTAGAAAGAGATTACACGTAAAATGGACGTCACTCTAGTTTTTAGACCAGGACGTCCATGAGAAACCAGAAAATGAAGTTTCCTATAGAAGATCTTCATCATTGAAAATTCCCCTATTTCCCCCAGCCAACCCGGAAAAGCTCGGATTGCTTGGACAAGGAAAATCCTCACATTTTTCTTAATTTAAATGTCGTCCAGACAGATAATCAATTTACTATAAAGATAGGCAACAATGATATTTTAGCATCGATATATAGTTTCATTTGGCTGACATTTCTAATTCTCACATGGCAGTGCAGTAGAGAATGATGAAGCTGCAAACATATGCGGGAATTAGTTTCATTGCAACTATAGTGGTGATCTATCATGCCTTTAACAGTAGAGGCCAGTTCTACCCAGCGTTGGTCTATTTATCAACTTCCAAGATCAATCTAGTGCTTCTTCTCAACATGGGTTTAGTCCTCATGTGCATTTTGTGGCAGCTAACCAAAAAAATATTTCTTGGTTCCCTCCGAGAAGCAGAGGTTGAGAGGCTCAATGAGCAATCGTGGAAGGAGTTGATGGAAATCCTCTTTGCCATCACTATCTTTCGGCAAGATTTTTCTGTTGCATTCCTTGCTATGGTTACGGCTTTGTTATTGATCAAAGCTTTGCATTGGTTGGCTCAGAAGAGGGTTGAATACATGGAAACCACTCCATCGGTGCCGTTGTTGTCTCATATCCGGATTGTTTCTTTCTTGGGTTTTCTCTTTGTTCTAGATAGTCTGTTTTTGTATAATTCGATAGGTTCTCTGATACAGACAAGGAAGGCTTCAGTTTCCCTCTTCTTTTCATTTGAGTAAGTTGGCAATTTCAACCGTATGGTATATAACTTGCATCTGTCTTTGTACAAGCATAAACTATGATGTTTTGTGGTTAGAATGTCAAATATTTCAAGACCATGTTAGATGAACTAACAAATTATTTTTAAATTTGATATTTAATATCGTATATAGAGAATTCATGACTACCGTCTTTTTGTTTTTTTCTTGCTGGAGTTAGGTCTTTTAAATATCCTATGATGTTTGTTTCTGGATCTCTGAGGATCTTTTGTCATCATTAAATAAAGTCAAGGACTTGCTTTTCAGGTATATGATTCTTGCGACAACAGCCGTGTCAACATTTGTGAAATATATTTTCTATGTCAGTGATGTGCTCATGGAGGGACAATGGGAAAAAAAGCCTGTCTATACATTCTACTTGGAGCTTATCCGAGACTTGCTTCACTTGTCGATGTACTTGTGTTTCTTTCTTGTGATTTTCATGTAAGTAATCAAGCTACATTCCCTAAGCCTATCTCATTTGTGTGAATTGGAAGTTTGAATTAATCCCTTTCTGTAAAAATGTACTCATATTGTTTAAGCCCAAATGTTAAAGTAGGAGGATGCTGGTTTTTCTCAAAGAATATTATGCAAACTATAATAATCATGTGGTAACTGGGATTTATGCCCTTAATCATTGGCTGTCAGATTTTACTTTCATGTTAATTATGAGAGATGGCTCACAGGAGTGTCTTTTGACTACATGGTATTTGTTGATTGTTTTGATATCCTTTACATCCTTATTATTTTCAATCAGTTGTTCTTATTTCCCTTTTAGATTGAAAGAGGAAGAGCTTTCTGCTTACATGCACACATTGCCACTAGAAAAAAGATGCTTTTGATTGTAGTCTAACGAATTGTTTTTTTTTTTTGGAGTTTTTTGGATAAGAGCTATGTGGTCAGGATTTCATTGCTAGACTGTAAACACAGAAAGATATTCATTTCACTAACCCGGTTCCGTTTTGAACTTTCAACTATCTGTTCTCTCCTTTCCTACTATATTGAATGCCAACTGCTTAACACACAGTAAAGAGATAAGGAGGTTAAATGAAGCTCCAGATTACGTGTATTATGCAAATTTCTTGACTTAAATATGCTGGTATTTAATATACGTTTAATAGTTTAAAATGCACGATTTTATATCCTCTATTATTCTATCGTCACTGTATTTGCTCTTTATTAACTTCATTCTCTTTTCTCATTTTAATAATGCTGAGTTTGCTCTTGTAGGACATATGGCGTGCCTTTGCACTTGATCCGTGAGCTCTATGAGATCTTTAGGAATTTTAGGATTCGTATTGCAGATTACATTCGGTATAGAAAGATTACTTCAAACATGAATGATCGTTTCCCAGATGCAACACCTGAAGAACTCAATTCGTGCGTCTAAGCTTGGTCAACTTATTATGTCTATTATGTTTCCAATATTTATATTTCAGCTACTAAAATTCCATTTACGGAATTGCAGAAGTGATGCAACATGCATTATTTGTCGTGAAGAGATGACAGTTGCAAAGAAGCTAGTATGTGGACATCTTTTTCATGTCCATTGCCTCCGGTCCTGGTTGGAGCGACAACATACTTGTCCCACTTGCAGAGCCCTTGTTGTACCACCTGAAGGTTCAAGCACAGCAGGAGGTCATCAGGGATCGCAGTCTGATGCTAATCAACAAGGTAATTGTAAAGAATTTAGTTTAATTTACTGCCTGGCTAAAAGATCTTAGATCTTGTGCAATTTTTAATTTGATAAATTTATTCAATCTCTTCAATCACCATGAATTGACCAAGCCTTTCAATATGTACTTGGAGGGAATAGACTCAGACTATTGTCTCGGGAGATTAGTTAGTTAGGTGTGTGCAAGTTGGTTNTCGGGTTAAAAAAAAAAAAAAAAAAAAAAAAACTAATCTCTTCCATGTATATATTTCATCTAGTTATGGACTTGTTTGGAATCTTTCGTTTTCCTCAAAATTTCAACTAAGGAAGAAAAGCATGAAAGATCTGGAAGACACTTTTTCTTGAAGTATCAAAGCTAAAAGAGTACTCTTTGTTATTGCTTATGTTACATTCAGAAACCTAGAGACATATCTGTCCCATCTGCCACGTCACCTACAAATTAGATGGTGCACAAATTTTCTGGTATTTTACTTGTACAGTGCTTCCCTGCATTTCAATTCTCTTAACAAGTGGTGCTTTTTATACAGCATCCACAACCCAATTTGGTTTAACGTTTCAAAACTATTCCGGGTCATTAAGTAACAATGCAAAAATGAGGCATCAGTATTTGCAAGTCTTCTCTATACGTAGTATATACCTCACCATCAGGGTGAAAGAGTTGAAGTCTTCTCATTTCATGGGTGTTGAATTTCTCTCTTCTCTCATCTTTTTTCTTATTTTTTTTTTGAATTCATGCATTATATTCGTGCTTGTTTTTCTTAAGAGACTGTCCTTAAAGCTATCAAATATTCTATATATTTTTGTGTCCTAGCAATTCAAACTCGTCTAAAGGAAGTAGTTTGATTCTAGGAATGTCTACGAATTTAAGCACATCTCTTTGAGAACAGATGATCATTCTTGAACTAGACCTCTGGTTCTCTATAGAAATTGGGTGCTTCACTTTATCCTTTCTTGTTTTGTTTTTAATTTTCTTATTGTTAGAAATGTTGTGGTTGTATTTCCAAGTTTTCCATTGAAATTTTGCAAAGCCTTTCCTTCACCTAATAAACTGTTTGGAGTCTTTTACTCGATCTCATTGCTTTGGATTAACAGCATTAAATGTTTGATTGTTTGGTGCATGCTAGTAGCATTGTTTTCAGTGTATCTGCTTTCTTTGATAGTTTTGGATGCAAATCATGGAACTGTTTTTTTCAATATGGTAGTCTACCAGGCTGAAACTTGGATATAATGAGTGACCATTCTGTTGGAAACAGGAACAGGAACCACAAGTTCATCTGCACAAGGTTCGGGTGGTACAGGTGCTGTTGGTGATAGTTTGAGTCATCATCAGGCTAGAGTCCAGGCTGCTGCTGCTGCTGCTTCAATATATGAGAAATCTTATGTTTATCCTTTTGCGAACACATTAGCATGGTATAGCTTTTTATTGCAAAATATGTGGTCCCTGTCTTATTCTCCTTTTTTTGGTCTTGAAAATTTACTTCAATATTAAGGCCATTTCTCCCCTTGTATATAACAGCCCTCCACCCCAAAGAGAGAGAAAAGAGTATGACATATATAATTTTTATTTTGTTTAATTTTATTTATTTCCAGGTCTCCTGGATACGCAGTAGTTCCTCAGGTTCAAAGACCTTTGCTTGACTCCAACAATGTAGAACCGATTGGAGAACAAGCTTCCAATGAACAAGCACAATATTTTCCATTTACAAGCGGCCCTGCAAACCTGTCCTTTACTCAAATTCCCCAAAATCTTTTTGTTCCTTTTCAGCCACGAGAGGGCACTGTAAACAATACGGATGGATTGGGCAGTAGTCAAAATACATCGGGCTCACAGCTTGAAGCTCAAGAAAGATTTCTTCAACAACAGATTGAGGTATAATAGTTAATTACAGCACGAACATTACCTGGTGAACTGTCTTGTTTAGTTAGTGAAGGTTCTGTTTGGGCTCTTGTTGCTGGACCCTTGTATATTCTTTAGCTCAAGGTGAGGTGATTCAATTAGAGGCTGAGAGGAGCTTGCTTGTAGTTTGAAGGAAGAAATAAATACTTTATGTTTTTAGATTTTTCATTGAGAAAGCGTAAAGTTCTTCACACTGCTTCCAAACAACTCTATATTTTATAGAAACTCGAGGGTAGATAGAAGTGAAGAGGAGTCATAAAATCAAATTGTTAACATGGAGTATGTGATAAGTGAAGGATATACCCTGTAAAGAAATACATTTGTATCTATTCAATCCCATTCATACTAATTTGGCTGAGGCTGAGGGTCTTTATTTAGGAGAGTGCACTTTTTTTTTTGGCTCAATGGCCACTTCCTCTAATATTCAAATTTTCATTTTTGCCAACAGATCCTACAAGATCAGCTGCAACTTCTCCGTAAACTGAAAGTCGAAGATAGCTCAATAGCAGGCGAGGCAGACAAGAAAGGGAAAAGCATAGCATCATCGTCGCAGTCATCATCTTCATCAGTTTCAGATTCTCATCCACCCGGAGAAACCGAAAGGACGGTGGGATAAGAGAAATGTGCATAATTACAATGTGTAATAATACAAGAATAGAGATTCAGAATGACAGAGATATCTCTTGTTCTTGTATTCGGAAGATGTACTTGGTAAATTTTTAGAAGCAGTCTTCTTCCCATTTGCATAGCCGCGTTGGTTAGTTGGTTGTAAATGCTGGATTTGAGGCGTCCTTTTTGAAGCAATTATGCGACGGTCAAAAAGGAATGTTGAATGTTCTTTTTAGCAAAGAGAAGAAGAGAGAGATTACATTCAAAGATGTTTGGTTGCTATTTTCTTAGTCTAAAAGATGCTTTTTGAAAAGCACTTCAATTCACATGCGCATGAGTTAAAAAGCATTGATTGTTTGGAAGTGGACATTTAGAAAAAAAAAATAGCTTTGACAAGGTCTTACAGATAGTGCTATGCTAATCTTGTTTTCTATGGTTCATACATAGCCATCCCCATTGACTCAAGAGTATCTTTTGAGTAACAAATGGGTTCTAAAAGTAAAAACATTATCTCGAACAGGTTAAAAATGGTGTTGGTTTTATGATTGTTGTGGCTATGTATTTTTTTTTTTCAGTTGAATTTTGGATGCTTTGATAATTGAGCATTTTTGTGTTCTTGGTTGAATCTCTATTTTGGAGTTGGACTATTTGATTTCAAGAAAAGAAGTGAAGGAAGAAGAACAAAGACCAAAGAAAATCAACGACTTTTCTCCTTCCGTTTTAATTCAACCCATCCCAATTTCCTGTGCAATTTCTTCTTCTCATTCCATGGAAGCCTGCAAGCTCTGCAAGTGGTCAATTTTTTCGCTTCTTCTTCTTCTTCTTCTTCGTCCATAACATTTTCTTCAATTCCTTACTTCGAGTCTCCTCGACCCTGTTGCAGTCAACGGGGTTCCTTCACGTTTTGAGCAGTTTCCTCGAAGGTTCCCACAGAATCTGGAGCTCCGATTCGAGGATTCTGTTGAGCTTTGACCTCTTGGCGCTCCTCCTCCTAAATCCCTCTGCTCACTATGTCGGATTGTTTCGAGTGTAAACTTTAGTGCGGGATTTTGGTTTGCGTTATGTCGGTGATGTTGCGTTCTTCGTCTTCTCTGTGGATAATTTTGGTGCTCCGGTTTGTTTCGCTGCTCTCTGCTAATCCTGAAGGTATTTGCTTATTGAATTTCTTGTTCATATCCGCGTCGGTAATCCGTTCTTCTTTGGGTTTTGTTTCTGTTTTCCGATTTGATTCCGTTGACAAAATGAGAAAACGAATGCGACCATCTGTGTTGTTCCACATGTTTGATCGCCGGAAAATCTGATATATAGATTACGATGCGTCGAATTATTTAGCTATCTAGGTTTATAGTTCAAACGAAGCATCTCTAGTACAGGCTGCCCATGTGATTACATTTTGGGATAGCATTGTACCGTTTGGAATAAGAATCATGGTTTTGTATTTTGCTGGAGATTTTGCAAATTTATTGACTGAGCTTTAGCCATATCGAAATTTAATCGAACTCGAAGTTTTGTTTGGTTTGAGACTGTGATAATCTTCAAGCCTTCTGATGATTGCACATCACTGTTCCTAGTTTGTATTGAATACGTTAACTGCTCGCTGCACTTTGTGGATGCTCGTTTCTTGGACTAACTATTGTGTACTTCGTGGGGGCAGGCGATGCTTTGTATGCATTGAAGTCGAATTTACAAGATCCCAACAGCGTATTGCAGAGTTGGGATCCAACACTTGTTAATCCCTGCACTTGGTTTCATGTCACCTGTGACAACGTGAATACTGTCATTCGAGTGTAAGCTTCTATGTCTACTAGGAGCTTGGAACAAATGTTGCTTTTGGAAATTATTATTATGATTGCTGGCCCCTCAATCTTTTCCTTCTTATTTGTCCAGTGATCTTGGAAATGCAAATCTATCTGGCACATTAGTTCCACAACTTGGTCAGCTTTCGAGTTTACAGTATCTGTGAGTGTTCGCCGATTCGTGGCTACACCAATCTCTTTTTTTTATCTTTGATTGTGCACAAGGTTATATTGTCATCTAGTTTCTTACCAAATTTCATGAATTACGTTTCTTCTAAATGTTACACATCTTAGTCTTTATTCCTTTATGCCGTCATCAAGGATTGCAGAATCGAAAGAAATAATAAAAATATCTCAAAGATCCAATTGACTGGATATGCTTAAAAAGTAAGAGTGAGGGAATGCAATTTATCTATGATAATTATCTTAGTTGCAAATAACATGAACTGATATGATATGATAATTATCTTAGTTGCAAATAACATGAACTGATGTGATATGAGAATTATCTTAGTTGCAAATAACATGAACTGATATGAAATGATAATTATCTTAGTTGCAAATAACATGAACTGATATGATATGACAGGGAACTCTATAGTAACAATATTAGTGGAGGAATTCCGGAGGAGCTTGGGGATTTGACAAACTTGGTGAGCTTGGATCTTTACTTGAACAATTTAACTGGTCACATACCCGTCACACTTGGCCAGCTTGATAATCTGCGTTTCCTGTATGGTTACACATCCTTAAACTTTCCCTCCTTCTGTGTACTTTTTTAGCATCTGATTTATATTTTCCTTTTCCTTTTCTGCCATGCTTTTGCTGCATGGTTGGTTTGTTTGATGTACTTTTTTGAGAATGGATTTTTGTTTCAGTTTTTTAGTAATTTCANTATCAAGTAAATAAGAAAGGAAAGATAATTCTTTGTGATATTTTGGTAGTAATTTATGTGAGCTCTGAAAGTATGCATAATAGAAAACTGCAAGTTTTAATCAATGGCTCTAGTAAATAATTCACTGATGACATCTTATTTGGAGTAAAAGGATGGATGAGATAGGATTTCGTTCCTTTAAACCACTAGTAGTTTTTACTTTTCTCATAGATTTTCCAATGAGAAGGAACAGGAACGAATAAGAAGGATGTGGTGGTTACGAAACTATCTACCCGTTTCTTCATTTTAAACGAGAAACCTGGCTTGAAGAACTTCATCCACAAAACACTGATCAACTTTATCAAAAGCCTTATAAATCCTCTTTTACCACCCAACACTATTTCTTTTTGCATTTTTCCTTTTTTATTAGTAGGATTTTCATAAGTCATAGGCGAAACTAATCGTTTGGGGGTAAGGCACTAATGCCTTCAGCGTTCTAATAAGGGCACAAAAAAGTAAAGAGTTTCTTGCCACTCAATCCTGAACTTTCTTTTCCCCTTATTTTTTAAATAAGGCTTGTGCTAGATGCTTACATATGTTGGCTTCCATATAATCAAGTAGAGTAGATAAAGACCCACCCTTTGTGTTAGTTAGAATTAGTTCCTTGGACACTTGGACGTTGGCTCATGCCAACCATAGACTATTAAGGATCAGATTTGCACATATTCTATGTTATAGCTGGAAACTTATTTAGCTTCCTTTTTGGGAGATCAAACAAAGCTCGATTAATTTTCTGCTAAACTAGAAAGAAAAACATACCTAACAAGGAACTAGACTGGAAAATTGGAAATGGAATTTTTTGGAGGGAGGTCAAACAAAACTCAATTACTCCCAAATGGCTTTTGTTGGAGGGAGGCAAATTATTGATGCTATCCTTATTGTTGCTGAAGCAACAGATGACTACACTCTAGACAGAAAAGGGGCTTCATTACTTTAAAAAGCCTATGATAAGGTGGATCAGGCTACCTTAACCACATCTTGCAGCTTAAAGGGTTTGGGGATAGATGGAGGAGGTGGATTAGGGGTTTCTATGCAAATTCCAACGTCTCTATCATGATAAATGGTGGGCCGCGAGGAAAATTCTGAGCTTTAAGAAGCATTAGACAGAGAAGCCCTCTGTTCCCCCTTTTTACCCGTGTTGGGGTTTAGGAGGTGGTTAGGATTCCTTTTCCGAACTTTATTATTTGTGCTTAGGCCTTCCAAGAAAAGAGACCAGAGAAAGAATCAAGATTGTGGTATTATTTACCCTCACCTTTACTGCATGCTTAATATATATATTTGTTTACATCCAATCAAAGATGTCTATAACAGCTCTGCTGTCGTCTTCGAAGTTACTTTTATCACGAAGTCATTGGAATGACAGTTCTCTTGATGCTTTCCTATTGAGAATGAGAAAAGGAGGGCTTTGTACCAGTTTACAACGGAAAAACTAACGTTAAATACTTTCAGACATATGAAGCTTTTTTGCATGACCGTGCATTCCCAAATCTGAACTACTGCTTTATAATTTATATTTCATCATGTCATCCTTATTCAATTCATACCCACCTTGATTCTTTGATTTTTTTCCCGTTCTTTTGTTATATTTCTGTGCTTTTTTTTTGAACTCCCTCTTAAGTGGATCTCTTACATGGTTTTCTTCTTCATATATGAAATAGGCGTCTTAACAACAACAGCTTGACAGGAACTATTCCAATGTCATTAACCAAAGTTAAATCCTTGCAAGTCCTGTGAGTGTTGTGCTTTTTAATATTATTCCAAGGGACCAGTTACTCTTGCTCTTTTCTGTCATTTTCGTTTCCTTTTCTGTTTTAAGTAACATTATCATTCAATTGTACTTCAGGGATCTTTCATATAATCACCTAACTGGAGATATTCCGATCAATGGTTCTTTTTCTCTTTTTACCCCTATCAGGTAATAAGCTTTATGTCTTTTATTTTCTTTCTTTCTTTCTTTATCATATAACAGAAGCCCATTAAGAGTTGCTGACCTTCCTTCTCTACGCAGTTTTGCTAACAATAATCTAAATGAGTCTGCCGTACGTCCTCCACCATCTCCTTTACCTTCTTCACCAACCCCCACATCAGGTTTGTTATCATATAAGTCTCCCGCTATTACTTTTTCTTTTAATATTATTATTATTTAAAAAACATATTTCTCAATATGAACATGTTTTGCAATATATGTTGATTGTATTTGATGTTATAAATTATTTTTACTGATTTTCTTGTCTATTGAGTGCGTGTTCAAGTTAAGAGAGTTCCAAGCCTCTCGGAGGCTTAGAGGTCTTCAAATTGCCTCATTGACTTGGACACTTTTACTTCTATTTCCTATATTTTCTTGTGTTTGTTTGAATATGAAGCTGTTTGGAAAAAAATATTATTTCTCATATTTTCATTTTCTATTTACTATAATTTAATTTATAATGCATTTTAATAGTTTTCTTTTAAAAAAAAAATGTATGGAATATAAATGAATAATTATTTAAGAAAGAAGTAAAAACACATGAAAGCAGTAGATAAATAAGTCCAGCTAGCTGTCCAGCCATTAGATAATGTGGTCTTTCTTCTATAACATAGCATACTTATGCCTGGTTCATTTATTTTGAAAACTCAATTATCTCCAGTATTCTTCTAGATGCCATTTAAAATACTAGACTGTTCAATTAGATATAGCCGACGCTAGATTGTTCAACTTTGGCATTTGAAGCAATGTTGATATGGATAAGCATGGTTAAAGAAGTTATTTTGGTACTATGGTTGGAAAGAAACCATAAGTGATATGAACAGACATCTGAATCATGTAATATGGATTTGAAGGAGGATGTTAAAAAAAAAATTGTTCAAATTACCTCAAGATGAACTCAAGTTGCAATTAGAAGAATCAAGCTTCTTGGATGGTTACAATTTTTGGGTGGATGATAATCTAGTGCTAAGGTGTTTCATTAATATATTTTAAAACTTTTTTTTATTTATTTTAAGGTTACATTTAGTTGCTATATAGTTATAAAAGATGAGGTTATATAAAGCAGGTATGTTGTCTTTTAAAGTAGACTTGAAAAATGCAGTAAAAAGCACAAATGCAAAGGGCTAAACTTCTTTGCAATTCTATGTAGTTTAGGTTGCATGAGTAGAATCATTCAAGCTTGACTTGATCAATCTTGCTTGTGGAGTGATTCGAATCTCAAGCAAGTGTTCTTGCCTTGAGATATTTAATCAACTAGGTAATCTAAAGCACAAATGCAAAGGGCTAAACTTCTTTGCAATTCTATGTAGTTTAGGTTGCATGAGTAGAATCATTCAAGCTTGACTTGATCAATCTTGCTTTGCAAAGGGCTAACTTCTTTGCAATTCTATGTAGTTTAGGTTGCATGAGTAGAATCATTCAAGCTTGACTTGATCAATCTTGCTTGTGGAGTGATTCGAATTTCAAGCAAGTGTTCTTGCCTTGAGATATTTAATCAACTAGGTAATCTAGGTCTTACTTTCCCTTGGATTGATTGCTTGTCGTTTTGAGGTTCTTGGACATTTAGATCTACTATTCGAATCTCAAACAAGTTTGTTATGAATGGTGGGTTTTGGCTTTTTTCTACTATTTTTCGTTTCCTTCTTATTTTTTATGCATCTTCTAGATTACCAACAAAAAGTTCGTTTCTTGAAAAAAAAAAAAAAAAGAAAAATGAAGAAGAAGAAGAAAAAGAAGAAGATTAAGAAAGACATATATGGTCATTTGACACTGTTGATTAAATTATCTTTTCTGTTCAATTTGGTGCTTGGCTTTTAGGTAATTCTGCCACTGGAGCTATTGCTGGTGGAGTTGCTGCTGGTGCTGCTTTACTGTTTGCTGCTCCTGCTGTTGCAGTTGCTCTGTGGCGTCGGAAGAAACCTCAAGATCATTTCTTTGATGTACCTGGTCAGTGTACTTAGCAACAAAGTTATGAAAATGTTACATTCCTACATCATTTAACAGGAATATTTATTCAATTTCACTTCTTCTATACAGCTGAAGAGGATCCAGAAGTTCATCTTGGTCAGCTTAAGAGGTTCTCTCTACGTGAACTACAAGTTGCTACGGATAATTTTAGCAACAAAAATATTCTAGGTAGAGGTGGTTTTGGCAAGGTCTATAAGGGACGTCTGGCTGATGGATCTCTAGTGGCAGTTAAAAGACTCAAAGAAGAACGTTCCCAGGGTGGGGAGCTGCAATTTCAAACAGAAGTTGAGATGATCAGCATGGCTGTGCATCGTAATCTTCTCCGCCTGCGTGGATTTTGTATGACGCCAACTGAGCGGGTGTTGGTCTATCCATATATGGTTAATGGAAGTGTAGCATCGTGTTTAAGAGGTACTGTTTCATAGCATACTTTATATATATTATGGTTCTTAAAACTCTGCATAGAGTTGCAGTCATATGNGAGGTTATATAAAGCAGGTATGTTGTCTTTTAAAGTAGACTTGAAAAATGCAGTAAAAAGCACAAATGCAAAGGGCTAAACTTCTTTGCAATTCTATGTAGTTTAGGTTGCATGAGTAGAATCATTCAAGCTTGACTTGATCAATCTTGCTTTGCAAAGGGCTAACTTCTTTGCAATTCTATGTAGTTTAGGTTGCATGAGTAGAATCATTCAAGCTTGACTTGATCAATCTTGCTTGTGGAGTGATTCGAATTTCAAGCAAGTGTTCTTGCCTTGAGATATTTAATCAACTAGGTAATCTAGGTCTTACTTTCCCTTGGATTGATTGCTTGTCGTTTTGAGGTTCTTGGACATTTAGATCTACTATTCGAATCTCAAACAAGTTTGTTATGAATGGTGGGTTTTGGCTTTTTTCTACTATTTTTCGTTTCCTTCTTATTTTTTATGCATCTTCTAGATTACCAACAAAAAGTTCGTTTCTTGAAAAAAAAAAAAAAAAATAAAAAAAAAAAAAAGAAAAATGAAGAAGAAGAAGAAAAAGAAGAAGATTAAGAAAGACATATATGGTCATTTGACACTGTTGATTAAATTATCTTTTCTGTTCAATTTGGTGCTTGGCTTTTAGGTAATTCTGCCACTGGAGCTATTGCTGGTGGAGTTGCTGCTGGTGCTGCTTTACTGTTTGCTGCTCCTGCTGTTGCAGTTGCTCTGTGGCGTCGGAAGAAACCTCAAGATCATTTCTTTGATGTACCTGGTCAGTGTACTTAGCAACAAAGTTATGAAAATGTTACATTCCTACATCATTTAACAGGAATATTTATTCAATTTCACTTCTTCTATACAGCTGAAGAGGATCCAGAAGTTCATCTTGGTCAGCTTAAGAGGTTCTCTCTACGTGAACTACAAGTTGCTACGGATAATTTTAGCAACAAAAATATTCTAGGTAGAGGTGGTTTTGGCAAGGTCTATAAGGGACGTCTGGCTGATGGATCTCTAGTGGCAGTTAAAAGACTCAAAGAAGAACGTTCCCAGGGTGGGGAGCTGCAATTTCAAACAGAAGTTGAGATGATCAGCATGGCTGTGCATCGTAATCTTCTCCGCCTGCGTGGATTTTGTATGACGCCAACTGAGCGGGTGTTGGTCTATCCATATATGGTTAATGGAAGTGTAGCATCGTGTTTAAGAGGTACTGTTTCATAGCATACTTTATATATATTATGGTTCTTAAAACTCTGCATAGAGTTGCAGTCATATGACCATAAAGATTGCATACTGAACTGAACTCTCTCTCTCTCTCTGGTAAATCCACAATCACATGAAATGACTGCATGGGTGAATTTTAAAAGTATTACAAGTTAACATAATCACATCACGTGCTGAATTTTCACATGATACTCTCTTGCTTTTGGTTTACACTATTGTAGAGCGTTCAGAATTACAGCCTCCACTTAATTGGTCGAACCGAAAACGCATTGCTTTGGGATCGGCAAGGGGACTTGCTTATCTACATGATCATTGTGATCCTAAGATAATTCATAGGGATGTGAAAGCTGCAAACATTTTGCTTGACGAGGAGTTTGAAGCCGTGGTTGGTGATTTTGGGCTGGCTAAACTCATGGACTACAAAGATACTCATGTCACAACTGCAGTAAGAGGAACAATTGGGCATATAGCGCCCGAGTACCTTTCGACTGGAAAGTCTTCTGAGAAGACTGATGTTTTTGGGTACGGGGTAATGCTCCTCGAACTCATAACTGGACAGAGGGCCTTTGATCTTGCCCGGCTTGCAAATGATGATGATGTGATGCTTCTTGACTGGGTATGTTTTTCCTTACCTTAATATTTTTGGATGCTATAACGTAATATGTTGACACCTACGAAAACATGGTTTCGTTGCTCGGTATCTTTTGGTATCAGTAAAACGCAACATAACATCCACTTCTTATGAGTACAATACATTAAAGGGTTTTCATAATTTAGTTCATTAGTTTAGTTCTCTTAAGGCTGCTTCCTCAACCTTTTAGGACTACACATAAAGGCGTCATAAGAACTAATATAATAGATTGGCTTAGTATTGAATAGACGGTGGATGCATTAAAAGTTGTATGATTCAGACCTTGTTAGTTACATATAAGATAGCTTGGACTTTAGGCGAAGTATTCATTATATATCCACTGTGGAGAATTATAGGTGAAAGGACTTCTAAAAGACAAGAGGCTTGAAACGCTAGTCGATCCCGATCTTGCGGGAAACTATCCTGACGATGAAGTCGAGCAGCTCATACAAGTTGCCTTGTTGTGCACACAAGGCACTCCTACCGAGCGGCCTAAGATGTCGGAGGTTGTACGGATGCTCGAGGGTGATGGCTTATCTGAAAGATGGGAAGAATGGCAGAAAGAGGATCGGTTCCAACAAGAAGTAAGCCGCAATCCCCACCCAAGTACTACTTGGATTCTCGACTCTACTGCTGAAATGCCTCCTGATGAACTGTCTGGTCCGAGATGATTTCTGGAAGCCCCCTCGTGTAAGTTAAGGATTGATATATGTATATATTTACCATATATATATATATATATATATCACATTTGTGCATATAGTTTCCACTTTTTTTTTATATAGAAAAAAATAATTTCATCATAAATTTTCTGGGTTGTTCATCTTGTACCACATATCTGAGTTCTCAGTAATTTGTAGAGGGGTTGGTAATCAAAACATGAGAATTCAGCTGATTTTTCAAATTTGATCTGATGAAGTGATGTTGCGTAAGTATATTGGTTTGTATTATCAAATTTTCCTTCTCTACCAATGAATTTATATTACACATCACTTGGATGGATTAAGTTCGATAAATGATTCAATTATTTATTGTCTCAGGATTAGATTTTGTCATAGAACAACAATGTTTATATCTTGTTATAATCTTGAAGAACATTGGCTGTTCTTGTCTCG

mRNA sequence

AAGTCTTTGAAAGAGGAGCCCTAACTTTGAATTCCATCTTGGTTCTGCATCAGCTTTCATGATTCTGCAATTTTTCGTGTTCGTCTCATCTTCATCGACTTCCAACTGGATTGCCGCCTAGATCTACCCGGGCATAGATAGCCATAGTCGCCGATCAAACAGTGCAGTAGAGAATGATGAAGCTGCAAACATATGCGGGAATTAGTTTCATTGCAACTATAGTGGTGATCTATCATGCCTTTAACAGTAGAGGCCAGTTCTACCCAGCGTTGGTCTATTTATCAACTTCCAAGATCAATCTAGTGCTTCTTCTCAACATGGGTTTAGTCCTCATGTGCATTTTGTGGCAGCTAACCAAAAAAATATTTCTTGGTTCCCTCCGAGAAGCAGAGGTTGAGAGGCTCAATGAGCAATCGTGGAAGGAGTTGATGGAAATCCTCTTTGCCATCACTATCTTTCGGCAAGATTTTTCTGTTGCATTCCTTGCTATGGTTACGGCTTTGTTATTGATCAAAGCTTTGCATTGGTTGGCTCAGAAGAGGGTTGAATACATGGAAACCACTCCATCGGTGCCGTTGTTGTCTCATATCCGGATTGTTTCTTTCTTGGGTTTTCTCTTTGTTCTAGATAGTCTGTTTTTGTATAATTCGATAGGTTCTCTGATACAGACAAGGAAGGCTTCAGTTTCCCTCTTCTTTTCATTTGAGTATATGATTCTTGCGACAACAGCCGTGTCAACATTTGTGAAATATATTTTCTATGTCAGTGATGTGCTCATGGAGGGACAATGGGAAAAAAAGCCTGTCTATACATTCTACTTGGAGCTTATCCGAGACTTGCTTCACTTGTCGATGTACTTGTGTTTCTTTCTTGTGATTTTCATGACATATGGCGTGCCTTTGCACTTGATCCGTGAGCTCTATGAGATCTTTAGGAATTTTAGGATTCGTATTGCAGATTACATTCGGTATAGAAAGATTACTTCAAACATGAATGATCGTTTCCCAGATGCAACACCTGAAGAACTCAATTCAAGTGATGCAACATGCATTATTTGTCGTGAAGAGATGACAGTTGCAAAGAAGCTAGTATGTGGACATCTTTTTCATGTCCATTGCCTCCGGTCCTGGTTGGAGCGACAACATACTTGTCCCACTTGCAGAGCCCTTGTTGTACCACCTGAAGGTTCAAGCACAGCAGGAGGTCATCAGGGATCGCAGTCTGATGCTAATCAACAAGGAACAGGAACCACAAGTTCATCTGCACAAGGTTCGGGTGGTACAGGTGCTGTTGGTGATAGTTTGAGTCATCATCAGGCTAGAGTCCAGGCTGCTGCTGCTGCTGCTTCAATATATGAGAAATCTTATGTTTATCCTTTTGCGAACACATTAGCATGGTCTCCTGGATACGCAGTTCAAAGACCTTTGCTTGACTCCAACAATGTAGAACCGATTGGAGAACAAGCTTCCAATGAACAAGCACAATATTTTCCATTTACAAGCGGCCCTGCAAACCTGTCCTTTACTCAAATTCCCCAAAATCTTTTTGTTCCTTTTCAGCCACGAGAGGGCACTGTAAACAATACGGATGGATTGGGCAGTAGTCAAAATACATCGGGCTCACAGCTTGAAGCTCAAGAAAGATTTCTTCAACAACAGATTGAGATCCTACAAGATCAGCTGCAACTTCTCCGTAAACTGAAAGTCGAAGATAGCTCAATAGCAGGCGAGGCAGACAAGAAAGGGAAAAGCATAGCATCATCGTCGCAGTCATCATCTTCATCAGTTTCAGATTCTCATCCACCCGGAGAAACCGAAAGGACGTGCGGGATTTTGGTTTGCGTTATGTCGGTGATGTTGCGTTCTTCGTCTTCTCTGTGGATAATTTTGGTGCTCCGGTTTGTTTCGCTGCTCTCTGCTAATCCTGAAGGCGATGCTTTGTATGCATTGAAGTCGAATTTACAAGATCCCAACAGCGTATTGCAGAGTTGGGATCCAACACTTGTTAATCCCTGCACTTGGTTTCATGTCACCTGTGACAACGTGAATACTGTCATTCGAGTTGATCTTGGAAATGCAAATCTATCTGGCACATTAGTTCCACAACTTGGTCAGCTTTCGAGTTTACAGGAACTCTATAGTAACAATATTAGTGGAGGAATTCCGGAGGAGCTTGGGGATTTGACAAACTTGGTGAGCTTGGATCTTTACTTGAACAATTTAACTGGTCACATACCCGTCACACTTGGCCAGCTTGATAATCTGCGTTTCCTGCGTCTTAACAACAACAGCTTGACAGGAACTATTCCAATGTCATTAACCAAAGTTAAATCCTTGCAAGTCCTGGATCTTTCATATAATCACCTAACTGGAGATATTCCGATCAATGGTTCTTTTTCTCTTTTTACCCCTATCAGTTTTGCTAACAATAATCTAAATGAGTCTGCCGTACGTCCTCCACCATCTCCTTTACCTTCTTCACCAACCCCCACATCAGCTGAAGAGGATCCAGAAGTTCATCTTGGTCAGCTTAAGAGGTTCTCTCTACGTGAACTACAAGTTGCTACGGATAATTTTAGCAACAAAAATATTCTAGGTAGAGGTGGTTTTGGCAAGGTCTATAAGGGACGTCTGGCTGATGGATCTCTAGTGGCAGTTAAAAGACTCAAAGAAGAACGTTCCCAGGGTGGGGAGCTGCAATTTCAAACAGAAGTTGAGATGATCAGCATGGCTGTGCATCGTAATCTTCTCCGCCTGCGTGGATTTTGTATGACGCCAACTGAGCGGGTGTTGGTCTATCCATATATGGTGAAAGGACTTCTAAAAGACAAGAGGCTTGAAACGCTAGTCGATCCCGATCTTGCGGGAAACTATCCTGACGATGAAGTCGAGCAGCTCATACAAGTTGCCTTGTTGTGCACACAAGGCACTCCTACCGAGCGGCCTAAGATGTCGGAGGTTGTACGGATGCTCGAGGGTGATGGCTTATCTGAAAGATGGGAAGAATGGCAGAAAGAGGATCGGTTCCAACAAGAAGTAAGCCGCAATCCCCACCCAAGTACTACTTGGATTCTCGACTCTACTGCTGAAATGCCTCCTGATGAACTGTCTGGTCCGAGATGATTTCTGGAAGCCCCCTCGTGTAAGTTAAGGATTGATATATGTATATATTTACCATATATATATATATATATATATCACATTTGTGCATATAGTTTCCACTTTTTTTTTATATAGAAAAAAATAATTTCATCATAAATTTTCTGGGTTGTTCATCTTGTACCACATATCTGAGTTCTCAGTAATTTGTAGAGGGGTTGGTAATCAAAACATGAGAATTCAGCTGATTTTTCAAATTTGATCTGATGAAGTGATGTTGCGTAAGTATATTGGTTTGTATTATCAAATTTTCCTTCTCTACCAATGAATTTATATTACACATCACTTGGATGGATTAAGTTCGATAAATGATTCAATTATTTATTGTCTCAGGATTAGATTTTGTCATAGAACAACAATGTTTATATCTTGTTATAATCTTGAAGAACATTGGCTGTTCTTGTCTCG

Coding sequence (CDS)

ATGATGAAGCTGCAAACATATGCGGGAATTAGTTTCATTGCAACTATAGTGGTGATCTATCATGCCTTTAACAGTAGAGGCCAGTTCTACCCAGCGTTGGTCTATTTATCAACTTCCAAGATCAATCTAGTGCTTCTTCTCAACATGGGTTTAGTCCTCATGTGCATTTTGTGGCAGCTAACCAAAAAAATATTTCTTGGTTCCCTCCGAGAAGCAGAGGTTGAGAGGCTCAATGAGCAATCGTGGAAGGAGTTGATGGAAATCCTCTTTGCCATCACTATCTTTCGGCAAGATTTTTCTGTTGCATTCCTTGCTATGGTTACGGCTTTGTTATTGATCAAAGCTTTGCATTGGTTGGCTCAGAAGAGGGTTGAATACATGGAAACCACTCCATCGGTGCCGTTGTTGTCTCATATCCGGATTGTTTCTTTCTTGGGTTTTCTCTTTGTTCTAGATAGTCTGTTTTTGTATAATTCGATAGGTTCTCTGATACAGACAAGGAAGGCTTCAGTTTCCCTCTTCTTTTCATTTGAGTATATGATTCTTGCGACAACAGCCGTGTCAACATTTGTGAAATATATTTTCTATGTCAGTGATGTGCTCATGGAGGGACAATGGGAAAAAAAGCCTGTCTATACATTCTACTTGGAGCTTATCCGAGACTTGCTTCACTTGTCGATGTACTTGTGTTTCTTTCTTGTGATTTTCATGACATATGGCGTGCCTTTGCACTTGATCCGTGAGCTCTATGAGATCTTTAGGAATTTTAGGATTCGTATTGCAGATTACATTCGGTATAGAAAGATTACTTCAAACATGAATGATCGTTTCCCAGATGCAACACCTGAAGAACTCAATTCAAGTGATGCAACATGCATTATTTGTCGTGAAGAGATGACAGTTGCAAAGAAGCTAGTATGTGGACATCTTTTTCATGTCCATTGCCTCCGGTCCTGGTTGGAGCGACAACATACTTGTCCCACTTGCAGAGCCCTTGTTGTACCACCTGAAGGTTCAAGCACAGCAGGAGGTCATCAGGGATCGCAGTCTGATGCTAATCAACAAGGAACAGGAACCACAAGTTCATCTGCACAAGGTTCGGGTGGTACAGGTGCTGTTGGTGATAGTTTGAGTCATCATCAGGCTAGAGTCCAGGCTGCTGCTGCTGCTGCTTCAATATATGAGAAATCTTATGTTTATCCTTTTGCGAACACATTAGCATGGTCTCCTGGATACGCAGTTCAAAGACCTTTGCTTGACTCCAACAATGTAGAACCGATTGGAGAACAAGCTTCCAATGAACAAGCACAATATTTTCCATTTACAAGCGGCCCTGCAAACCTGTCCTTTACTCAAATTCCCCAAAATCTTTTTGTTCCTTTTCAGCCACGAGAGGGCACTGTAAACAATACGGATGGATTGGGCAGTAGTCAAAATACATCGGGCTCACAGCTTGAAGCTCAAGAAAGATTTCTTCAACAACAGATTGAGATCCTACAAGATCAGCTGCAACTTCTCCGTAAACTGAAAGTCGAAGATAGCTCAATAGCAGGCGAGGCAGACAAGAAAGGGAAAAGCATAGCATCATCGTCGCAGTCATCATCTTCATCAGTTTCAGATTCTCATCCACCCGGAGAAACCGAAAGGACGTGCGGGATTTTGGTTTGCGTTATGTCGGTGATGTTGCGTTCTTCGTCTTCTCTGTGGATAATTTTGGTGCTCCGGTTTGTTTCGCTGCTCTCTGCTAATCCTGAAGGCGATGCTTTGTATGCATTGAAGTCGAATTTACAAGATCCCAACAGCGTATTGCAGAGTTGGGATCCAACACTTGTTAATCCCTGCACTTGGTTTCATGTCACCTGTGACAACGTGAATACTGTCATTCGAGTTGATCTTGGAAATGCAAATCTATCTGGCACATTAGTTCCACAACTTGGTCAGCTTTCGAGTTTACAGGAACTCTATAGTAACAATATTAGTGGAGGAATTCCGGAGGAGCTTGGGGATTTGACAAACTTGGTGAGCTTGGATCTTTACTTGAACAATTTAACTGGTCACATACCCGTCACACTTGGCCAGCTTGATAATCTGCGTTTCCTGCGTCTTAACAACAACAGCTTGACAGGAACTATTCCAATGTCATTAACCAAAGTTAAATCCTTGCAAGTCCTGGATCTTTCATATAATCACCTAACTGGAGATATTCCGATCAATGGTTCTTTTTCTCTTTTTACCCCTATCAGTTTTGCTAACAATAATCTAAATGAGTCTGCCGTACGTCCTCCACCATCTCCTTTACCTTCTTCACCAACCCCCACATCAGCTGAAGAGGATCCAGAAGTTCATCTTGGTCAGCTTAAGAGGTTCTCTCTACGTGAACTACAAGTTGCTACGGATAATTTTAGCAACAAAAATATTCTAGGTAGAGGTGGTTTTGGCAAGGTCTATAAGGGACGTCTGGCTGATGGATCTCTAGTGGCAGTTAAAAGACTCAAAGAAGAACGTTCCCAGGGTGGGGAGCTGCAATTTCAAACAGAAGTTGAGATGATCAGCATGGCTGTGCATCGTAATCTTCTCCGCCTGCGTGGATTTTGTATGACGCCAACTGAGCGGGTGTTGGTCTATCCATATATGGTGAAAGGACTTCTAAAAGACAAGAGGCTTGAAACGCTAGTCGATCCCGATCTTGCGGGAAACTATCCTGACGATGAAGTCGAGCAGCTCATACAAGTTGCCTTGTTGTGCACACAAGGCACTCCTACCGAGCGGCCTAAGATGTCGGAGGTTGTACGGATGCTCGAGGGTGATGGCTTATCTGAAAGATGGGAAGAATGGCAGAAAGAGGATCGGTTCCAACAAGAAGTAAGCCGCAATCCCCACCCAAGTACTACTTGGATTCTCGACTCTACTGCTGAAATGCCTCCTGATGAACTGTCTGGTCCGAGATGA

Protein sequence

MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVLMCILWQLTKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLAMVTALLLIKALHWLAQKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFLYNSIGSLIQTRKASVSLFFSFEYMILATTAVSTFVKYIFYVSDVLMEGQWEKKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYGVPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMTVAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTAGGHQGSQSDANQQGTGTTSSSAQGSGGTGAVGDSLSHHQARVQAAAAAASIYEKSYVYPFANTLAWSPGYAVQRPLLDSNNVEPIGEQASNEQAQYFPFTSGPANLSFTQIPQNLFVPFQPREGTVNNTDGLGSSQNTSGSQLEAQERFLQQQIEILQDQLQLLRKLKVEDSSIAGEADKKGKSIASSSQSSSSSVSDSHPPGETERTCGILVCVMSVMLRSSSSLWIILVLRFVSLLSANPEGDALYALKSNLQDPNSVLQSWDPTLVNPCTWFHVTCDNVNTVIRVDLGNANLSGTLVPQLGQLSSLQELYSNNISGGIPEELGDLTNLVSLDLYLNNLTGHIPVTLGQLDNLRFLRLNNNSLTGTIPMSLTKVKSLQVLDLSYNHLTGDIPINGSFSLFTPISFANNNLNESAVRPPPSPLPSSPTPTSAEEDPEVHLGQLKRFSLRELQVATDNFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERSQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERVLVYPYMVKGLLKDKRLETLVDPDLAGNYPDDEVEQLIQVALLCTQGTPTERPKMSEVVRMLEGDGLSERWEEWQKEDRFQQEVSRNPHPSTTWILDSTAEMPPDELSGPR

Homology

[Close]

BLAST of Cp4.1LG01g03290.1 vs. ExPASy Swiss-Prot
Match: Q9LW77 (ERAD-associated E3 ubiquitin-protein ligase HRD1A OS=Arabidopsis thaliana OX=3702 GN=HRD1A PE=2 SV=1)

HSP 1 Score: 610.1 bits (1572), Expect = 4.3e-173
Identity = 344/535 (64.30%), Postives = 402/535 (75.14%), Query Frame = 0


Query: 1   MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVLMCILWQL 60
           M++L+TYAG+SF+AT+ VIYHAF+SRGQFYPA VYLSTSKI+LVLLLNM LVLM  LW L
Sbjct: 1   MIRLRTYAGLSFMATLAVIYHAFSSRGQFYPATVYLSTSKISLVLLLNMCLVLMLSLWHL 60

Query: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLAMVTALLLIKALHWLA 120
            K +FLGSLREAEVERLNEQ+W+ELMEILFAITIFRQDFS  FL +V  LLLIKALHWLA
Sbjct: 61  VKFVFLGSLREAEVERLNEQAWRELMEILFAITIFRQDFSSGFLPLVVTLLLIKALHWLA 120

Query: 121 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFLYNSIGSLIQTRKASVSLFFSFEYM 180
           QKRVEY+ETTPSV  LSH RIVSF+GFL ++DSLF+Y+SI  LIQ+R+ASVSLFFSFEYM
Sbjct: 121 QKRVEYIETTPSVSKLSHFRIVSFMGFLLLVDSLFMYSSIRHLIQSRQASVSLFFSFEYM 180

Query: 181 ILATTAVSTFVKYIFYVSDVLMEGQWEKKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240
           ILATT V+ FVKY+FYV+D+LM+GQWEKKPVYTFYLELIRDLLHLSMY+CFF VIFM YG
Sbjct: 181 ILATTTVAIFVKYVFYVTDMLMDGQWEKKPVYTFYLELIRDLLHLSMYICFFFVIFMNYG 240

Query: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 300
           VPLHL+RELYE FRNF+IR++DY+RYRKITSNMNDRFPDATPEEL +SDATCIICREEMT
Sbjct: 241 VPLHLLRELYETFRNFQIRVSDYLRYRKITSNMNDRFPDATPEELTASDATCIICREEMT 300

Query: 301 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTAGGHQGSQSDANQQGTGTT 360
            AKKL+CGHLFHVHCLRSWLERQ TCPTCRALVVPPE +++A   Q      +QQ  GT+
Sbjct: 301 NAKKLICGHLFHVHCLRSWLERQQTCPTCRALVVPPENATSAAPGQRELHQGSQQ--GTS 360

Query: 361 SSSAQG---SGGTGAVGDSLSHHQARVQAAAAAASIYEKSYVYPFANTLAWSPGYAVQRP 420
           SS  QG   S   G   +SLS H AR+QAAA+AAS+Y KS VYP ANT+AWS G      
Sbjct: 361 SSGNQGSEISSSAGVSNNSLSRHHARLQAAASAASVYGKSMVYPSANTVAWSSGV----- 420

Query: 421 LLDSNNVEPIGEQASNEQAQYFPFTSGPANLSFTQIPQNLFVPFQPREGTVNNTDGLGSS 480
                   P  EQ S E  Q  P  + P   S                          + 
Sbjct: 421 --------PGTEQVSTEPDQTLPQHNLPVENSH-------------------------AY 480

Query: 481 QNTSGSQLEAQERFLQQQIEILQDQLQLLRKLKVEDSSIAGEADKKGKSIASSSQ 533
            N S ++LE   + L+  +EIL+++L  L   K E    AGE + KGKS+A +++
Sbjct: 481 ANMSETKLEEMRKSLETHLEILRNRLHFLETRKPES---AGEPENKGKSVADAAE 492

[Close]

BLAST of Cp4.1LG01g03290.1 vs. ExPASy Swiss-Prot
Match: Q6NPT7 (ERAD-associated E3 ubiquitin-protein ligase HRD1B OS=Arabidopsis thaliana OX=3702 GN=HRD1B PE=2 SV=1)

HSP 1 Score: 598.6 bits (1542), Expect = 1.3e-169
Identity = 335/533 (62.85%), Postives = 396/533 (74.30%), Query Frame = 0


Query: 1   MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVLMCILWQL 60
           M++L+ YAG+S +AT+VVIYHAF+SRGQFYPA VYLSTSKINLV+LLNMGLVLM  LW L
Sbjct: 1   MIQLKVYAGLSTLATLVVIYHAFSSRGQFYPATVYLSTSKINLVVLLNMGLVLMLSLWNL 60

Query: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLAMVTALLLIKALHWLA 120
            K +FLGSLREAEVERLNEQ+W+ELMEILFAITIFRQDFSV F+++V  LLLIK LHW+A
Sbjct: 61  VKIVFLGSLREAEVERLNEQAWRELMEILFAITIFRQDFSVGFISLVVTLLLIKGLHWMA 120

Query: 121 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFLYNSIGSLIQTRKASVSLFFSFEYM 180
           QKRVEY+ETTPSV LLSH+RIVSF+ FL +LD L  Y+SI  LIQ+RKAS+S+FF+FEYM
Sbjct: 121 QKRVEYIETTPSVTLLSHVRIVSFMVFLLILDCLLTYSSIQQLIQSRKASMSVFFTFEYM 180

Query: 181 ILATTAVSTFVKYIFYVSDVLMEGQWEKKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240
           ILATT VS  VKY FYV+D+L EGQWE KPVYTFYLEL+RDLLHLSMYLCFFL+IFM YG
Sbjct: 181 ILATTTVSIIVKYAFYVTDMLKEGQWEGKPVYTFYLELVRDLLHLSMYLCFFLMIFMNYG 240

Query: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 300
           +PLHLIRELYE FRNF+IR+ DY+RYRKITSNMNDRFPDATPEEL+S+DATCIICREEMT
Sbjct: 241 LPLHLIRELYETFRNFKIRVTDYLRYRKITSNMNDRFPDATPEELSSNDATCIICREEMT 300

Query: 301 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPE-GSSTAGGHQGSQSDANQQGTGT 360
            AKKLVCGHLFHVHCLRSWLERQ+TCPTCRALVVP E  +STA G++G   ++ QQGTGT
Sbjct: 301 SAKKLVCGHLFHVHCLRSWLERQNTCPTCRALVVPAENATSTASGNRGPHQESLQQGTGT 360

Query: 361 TSSSAQGSGGTGAVGDSLSHHQARVQAAAAAASIYEKSYVYP-FANTLAWSPGYAVQRPL 420
           +SS  QGS  + A  +++S H+AR QAAA+AASIY +S VYP  ANTL WS G ++    
Sbjct: 361 SSSDGQGSSVSAAASENMSRHEARFQAAASAASIYGRSIVYPSSANTLVWSQGNSL---- 420

Query: 421 LDSNNVEPIGEQASNEQAQYFPFTSGPANLSFTQIPQNLFVPFQPREGTVNNTDGLGSSQ 480
                                             +PQ                       
Sbjct: 421 ----------------------------------LPQ----------------------- 460

Query: 481 NTSGSQLEAQERFLQQQIEILQDQLQLLRKLKVEDSSIAGEADKKGKSIASSS 532
               +++EAQ RFL+ QIE+L +QL+LL K            D KGKS+A ++
Sbjct: 481 ----TEVEAQRRFLESQIEVLTNQLRLLEK--------PTTVDTKGKSVADTA 460

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BLAST of Cp4.1LG01g03290.1 vs. ExPASy Swiss-Prot
Match: Q5Z880 (ERAD-associated E3 ubiquitin-protein ligase HRD1 OS=Oryza sativa subsp. japonica OX=39947 GN=HRD1 PE=2 SV=1)

HSP 1 Score: 563.9 bits (1452), Expect = 3.5e-159
Identity = 313/511 (61.25%), Postives = 385/511 (75.34%), Query Frame = 0


Query: 1   MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVLMCILWQL 60
           M++LQTYA  S +AT   +Y+AF+SR QFYPA+VYLSTSKI  VLLLN GLV MC+ WQL
Sbjct: 1   MIRLQTYAAFSLMATATAVYYAFSSREQFYPAMVYLSTSKICFVLLLNTGLVAMCVAWQL 60

Query: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLAMVTALLLIKALHWLA 120
            K++FLG+LREAEVERLNEQ+W+E++EILFA+TIFRQDFSV+FLAMV ALLL+KALHWLA
Sbjct: 61  VKRLFLGTLREAEVERLNEQAWREVVEILFAVTIFRQDFSVSFLAMVAALLLVKALHWLA 120

Query: 121 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFLYNSIGSLIQTRKASVSLFFSFEYM 180
           QKRVEY+ETTPSVP+LSH RIVSF+ FL V+D LFL NS+ SLI  R+ASV++FFSFEYM
Sbjct: 121 QKRVEYIETTPSVPMLSHARIVSFMLFLLVVDCLFLSNSLRSLIHKREASVAIFFSFEYM 180

Query: 181 ILATTAVSTFVKYIFYVSDVLMEGQWEKKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240
           ILAT+ VSTFVKYIFYVSD+LMEGQWEKK VYTFYLELI DL+HLS+Y+ FF+ IF+ YG
Sbjct: 181 ILATSTVSTFVKYIFYVSDMLMEGQWEKKAVYTFYLELISDLVHLSLYMLFFIAIFLNYG 240

Query: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 300
           VPLHLIRELYE FRNFRIRIADY+RYRKITSNMN+RFPDAT +ELN+SDATCIICREEMT
Sbjct: 241 VPLHLIRELYETFRNFRIRIADYVRYRKITSNMNERFPDATADELNASDATCIICREEMT 300

Query: 301 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTA----GGHQGSQSDANQQG 360
            AKKL+CGHLFHVHCLRSWLERQHTCPTCRA ++PP+   TA    G H G Q      G
Sbjct: 301 TAKKLLCGHLFHVHCLRSWLERQHTCPTCRAPILPPDNGRTAARPHGVHPGVQP---VPG 360

Query: 361 TGTTSSSAQGSGGTGAVGDSLSHHQARVQAAAAAASIYEKSYVYPFANTLAWSPGYAVQR 420
            GT        G   A G+++S  QA+++AAA+AAS+Y +S+ YP AN L          
Sbjct: 361 NGT-------PGSERAAGENISRRQAKLEAAASAASLYGRSFAYPPANNL-----NRYST 420

Query: 421 PLLDSNNVEPIGEQASNEQAQYFPFTSGPANLSFTQIPQNLFVPFQPREGTVNNTDGLGS 480
           P   ++N    GE +++ Q+     T+ P+  +F               G V++   + +
Sbjct: 421 PPQSTSNGPQSGEASTSNQSPKGHATADPSAPTFY------------ARGAVSS---VTT 480

Query: 481 SQNTSGSQLEAQERFLQQQIEILQDQLQLLR 508
           ++    S  +A E  ++ QIE+LQ QLQ+ +
Sbjct: 481 TRELESSLQKAYENAIKSQIEMLQIQLQMFQ 481

[Close]

BLAST of Cp4.1LG01g03290.1 vs. ExPASy Swiss-Prot
Match: B8BB68 (LRR receptor kinase BAK1 OS=Oryza sativa subsp. indica OX=39946 GN=BAK1 PE=2 SV=1)

HSP 1 Score: 531.9 bits (1369), Expect = 1.5e-149
Identity = 319/618 (51.62%), Postives = 357/618 (57.77%), Query Frame = 0


Query: 567 SLWIILVLRFV---SLLSANPEGDALYALKSNLQDPNSVLQSWDPTLVNPCTWFHVTCDN 626
           ++W +L+LR +   + + AN EGDAL++L++NL DPN+VLQSWDPTLVNPCTWFHVTC+N
Sbjct: 7   AVWAVLLLRLLVPAARVLANMEGDALHSLRTNLVDPNNVLQSWDPTLVNPCTWFHVTCNN 66

Query: 627 VNTVIRVDLGNANLSGTLVPQLGQLSSLQ--ELYSNNISGGIPEELGDLTNLVSLDLYLN 686
            N+VIRVDLGNA LSGTLVPQLGQL +LQ  ELYSNNISG IP ELG+LTNLVSLDLYLN
Sbjct: 67  DNSVIRVDLGNAALSGTLVPQLGQLKNLQYLELYSNNISGTIPSELGNLTNLVSLDLYLN 126

Query: 687 NLTGHIPVTLGQLDNLRFLRLNNNSLTGTIPMSLTKVKSLQVLDLSYNHLTGDIPINGSF 746
           N TG IP +LG L  LRFLRLNNNSL+G+IP SLT + +LQVLDLS N+L+G++P  GSF
Sbjct: 127 NFTGPIPDSLGNLLKLRFLRLNNNSLSGSIPKSLTAITALQVLDLSNNNLSGEVPSTGSF 186

Query: 747 SLFTPISFANNN--LNESAVRPPPSPLPSSPTP--------------------------- 806
           SLFTPISFANN         +P P   P SP P                           
Sbjct: 187 SLFTPISFANNPSLCGPGTTKPCPGAPPFSPPPPYNPPTPVQSPGSSSSTGAIAGGVAAG 246

Query: 807 --------------------------TSAEEDPEVHLGQLKRFSLRELQVATDNFSNKNI 866
                                       AEEDPEVHLGQLKRFSLRELQVATD FSNKNI
Sbjct: 247 AALLFAIPAIGFAWYRRRKPQEHFFDVPAEEDPEVHLGQLKRFSLRELQVATDTFSNKNI 306

Query: 867 LGRGGFGKVYKGRLADGSLVAVKRLKEERSQGGELQFQTEVEMISMAVHRNLLRLRGFCM 926
           LGRGGFGKVYKGRLADGSLVAVKRLKEER+ GGELQFQTEVEMISMAVHRNLLRLRGFCM
Sbjct: 307 LGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCM 366

Query: 927 TPTERVLVYPYM------------------------------------------------ 983
           TPTER+LVYPYM                                                
Sbjct: 367 TPTERLLVYPYMANGSVASRLRERPPSEPPLDWRTRRRIALGSARGLSYLHDHCDPKIIH 426

[Close]

BLAST of Cp4.1LG01g03290.1 vs. ExPASy Swiss-Prot
Match: Q6Z4U4 (LRR receptor kinase BAK1 OS=Oryza sativa subsp. japonica OX=39947 GN=BAK1 PE=1 SV=1)

HSP 1 Score: 531.9 bits (1369), Expect = 1.5e-149
Identity = 319/618 (51.62%), Postives = 357/618 (57.77%), Query Frame = 0


Query: 567 SLWIILVLRFV---SLLSANPEGDALYALKSNLQDPNSVLQSWDPTLVNPCTWFHVTCDN 626
           ++W +L+LR +   + + AN EGDAL++L++NL DPN+VLQSWDPTLVNPCTWFHVTC+N
Sbjct: 7   AVWAVLLLRLLVPAARVLANMEGDALHSLRTNLVDPNNVLQSWDPTLVNPCTWFHVTCNN 66

Query: 627 VNTVIRVDLGNANLSGTLVPQLGQLSSLQ--ELYSNNISGGIPEELGDLTNLVSLDLYLN 686
            N+VIRVDLGNA LSGTLVPQLGQL +LQ  ELYSNNISG IP ELG+LTNLVSLDLYLN
Sbjct: 67  DNSVIRVDLGNAALSGTLVPQLGQLKNLQYLELYSNNISGTIPSELGNLTNLVSLDLYLN 126

Query: 687 NLTGHIPVTLGQLDNLRFLRLNNNSLTGTIPMSLTKVKSLQVLDLSYNHLTGDIPINGSF 746
           N TG IP +LG L  LRFLRLNNNSL+G+IP SLT + +LQVLDLS N+L+G++P  GSF
Sbjct: 127 NFTGPIPDSLGNLLKLRFLRLNNNSLSGSIPKSLTAITALQVLDLSNNNLSGEVPSTGSF 186

Query: 747 SLFTPISFANNN--LNESAVRPPPSPLPSSPTP--------------------------- 806
           SLFTPISFANN         +P P   P SP P                           
Sbjct: 187 SLFTPISFANNPSLCGPGTTKPCPGAPPFSPPPPYNPPTPVQSPGSSSSTGAIAGGVAAG 246

Query: 807 --------------------------TSAEEDPEVHLGQLKRFSLRELQVATDNFSNKNI 866
                                       AEEDPEVHLGQLKRFSLRELQVATD FSNKNI
Sbjct: 247 AALLFAIPAIGFAWYRRRKPQEHFFDVPAEEDPEVHLGQLKRFSLRELQVATDTFSNKNI 306

Query: 867 LGRGGFGKVYKGRLADGSLVAVKRLKEERSQGGELQFQTEVEMISMAVHRNLLRLRGFCM 926
           LGRGGFGKVYKGRLADGSLVAVKRLKEER+ GGELQFQTEVEMISMAVHRNLLRLRGFCM
Sbjct: 307 LGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCM 366

Query: 927 TPTERVLVYPYM------------------------------------------------ 983
           TPTER+LVYPYM                                                
Sbjct: 367 TPTERLLVYPYMANGSVASRLRERPPSEPPLDWRTRRRIALGSARGLSYLHDHCDPKIIH 426

[Close]

BLAST of Cp4.1LG01g03290.1 vs. NCBI nr
Match: XP_023531768.1 (ERAD-associated E3 ubiquitin-protein ligase HRD1B-like [Cucurbita pepo subsp. pepo] >XP_023531774.1 ERAD-associated E3 ubiquitin-protein ligase HRD1B-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1035 bits (2675), Expect = 0.0
Identity = 551/556 (99.10%), Postives = 551/556 (99.10%), Query Frame = 0


Query: 1   MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVLMCILWQL 60
           MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVLMCILWQL
Sbjct: 1   MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVLMCILWQL 60

Query: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLAMVTALLLIKALHWLA 120
           TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLAMVTALLLIKALHWLA
Sbjct: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLAMVTALLLIKALHWLA 120

Query: 121 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFLYNSIGSLIQTRKASVSLFFSFEYM 180
           QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFLYNSIGSLIQTRKASVSLFFSFEYM
Sbjct: 121 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFLYNSIGSLIQTRKASVSLFFSFEYM 180

Query: 181 ILATTAVSTFVKYIFYVSDVLMEGQWEKKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240
           ILATTAVSTFVKYIFYVSDVLMEGQWEKKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG
Sbjct: 181 ILATTAVSTFVKYIFYVSDVLMEGQWEKKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240

Query: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 300
           VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT
Sbjct: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 300

Query: 301 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTAGGHQGSQSDANQQGTGTT 360
           VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTAGGHQGSQSDANQQGTGTT
Sbjct: 301 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTAGGHQGSQSDANQQGTGTT 360

Query: 361 SSSAQGSGGTGAVGDSLSHHQARVQAAAAAASIYEKSYVYPFANTLAWSPGYAV----QR 420
           SSSAQGSGGTGAVGDSLSHHQARVQAAAAAASIYEKSYVYPFANTLAWSPGYAV    QR
Sbjct: 361 SSSAQGSGGTGAVGDSLSHHQARVQAAAAAASIYEKSYVYPFANTLAWSPGYAVVPQVQR 420

Query: 421 PLLDSNNVEPIGEQASNEQAQYFPFTSGPANLSFTQIPQNLFVPFQPREGTVNNTDGLGS 480
           PLLDSNNVEPIGEQASNEQAQYFPFTSGPANLSFTQIPQNLFVPFQPREGTVNNTDGLGS
Sbjct: 421 PLLDSNNVEPIGEQASNEQAQYFPFTSGPANLSFTQIPQNLFVPFQPREGTVNNTDGLGS 480

Query: 481 SQNTSGSQLEAQERFLQQQIEILQDQLQLLRKLKVEDSSIAGEADKKGKSIASSSQSSSS 540
           SQNTSGSQLEAQERFLQQQIEILQDQLQLLRKLKVEDSSIAGEADKKGKSIASSSQSSSS
Sbjct: 481 SQNTSGSQLEAQERFLQQQIEILQDQLQLLRKLKVEDSSIAGEADKKGKSIASSSQSSSS 540

Query: 541 SVSDSHPPGETERTCG 552
           SVSDSHPPGETERT G
Sbjct: 541 SVSDSHPPGETERTVG 556

[Close]

BLAST of Cp4.1LG01g03290.1 vs. NCBI nr
Match: KAG6600225.1 (ERAD-associated E3 ubiquitin-protein ligase HRD1A, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1018 bits (2631), Expect = 0.0
Identity = 542/559 (96.96%), Postives = 546/559 (97.67%), Query Frame = 0


Query: 1   MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVLMCILWQL 60
           MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVLMCILWQL
Sbjct: 1   MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVLMCILWQL 60

Query: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLAMVTALLLIKALHWLA 120
           TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLAMVTALLLIKALHWLA
Sbjct: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLAMVTALLLIKALHWLA 120

Query: 121 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFLYNSIGSLIQTRKASVSLFFSFEYM 180
           QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFLYNSIGSLIQTRKASVSLFFSFEYM
Sbjct: 121 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFLYNSIGSLIQTRKASVSLFFSFEYM 180

Query: 181 ILATTAVSTFVKYIFYVSDVLMEGQWEKKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240
           ILATTAVSTFVKYIFYVSDVLMEGQWEKKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG
Sbjct: 181 ILATTAVSTFVKYIFYVSDVLMEGQWEKKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240

Query: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 300
           VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT
Sbjct: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 300

Query: 301 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTAGGHQGSQSDANQQGTGTT 360
           VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTAGGHQG QSDANQQGTGTT
Sbjct: 301 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTAGGHQGLQSDANQQGTGTT 360

Query: 361 SSSAQGSGGTGAVGDSLSHHQARVQAAAAAASIYEKSYVYPFANTLAWSPGYAV----QR 420
           SSSAQGSGGT A GDSLSHHQARVQAAAAAASIYEKSYVYPF NTLAWSPGYAV    QR
Sbjct: 361 SSSAQGSGGTSAAGDSLSHHQARVQAAAAAASIYEKSYVYPFGNTLAWSPGYAVVPQVQR 420

Query: 421 PLLDSNNVEPIGEQASNEQAQYFPFTSGPANLSFTQIPQNLFVPFQPREGTVNNTDGLGS 480
           PLLDSNNVEPIGEQA NEQAQYFPFT GPANLSFTQIPQNLFVPFQPREGTVNNTDGLGS
Sbjct: 421 PLLDSNNVEPIGEQAPNEQAQYFPFTGGPANLSFTQIPQNLFVPFQPREGTVNNTDGLGS 480

Query: 481 SQNTSGSQLEAQERFLQQQIEILQDQLQLLRKLKVEDSSIAGEADKKGKSIASSSQSSSS 540
           SQN SGSQLE+QERFLQQQIEILQDQLQLLRKLKVE+SSIAGEADKKGKSIASSSQSSSS
Sbjct: 481 SQNISGSQLESQERFLQQQIEILQDQLQLLRKLKVEESSIAGEADKKGKSIASSSQSSSS 540

Query: 541 SVSDSHPPGETERTCGILV 555
           SVSDSHPPGETERT  +L+
Sbjct: 541 SVSDSHPPGETERTFLLLI 559

[Close]

BLAST of Cp4.1LG01g03290.1 vs. NCBI nr
Match: KAG7030884.1 (ERAD-associated E3 ubiquitin-protein ligase HRD1A [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1015 bits (2625), Expect = 0.0
Identity = 541/556 (97.30%), Postives = 543/556 (97.66%), Query Frame = 0


Query: 1   MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVLMCILWQL 60
           MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVLMCILWQL
Sbjct: 1   MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVLMCILWQL 60

Query: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLAMVTALLLIKALHWLA 120
           TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLAMVTALLLIKALHWLA
Sbjct: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLAMVTALLLIKALHWLA 120

Query: 121 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFLYNSIGSLIQTRKASVSLFFSFEYM 180
           QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFLYNSIGSLIQTRKASVSLFFSFEYM
Sbjct: 121 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFLYNSIGSLIQTRKASVSLFFSFEYM 180

Query: 181 ILATTAVSTFVKYIFYVSDVLMEGQWEKKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240
           ILATTAVSTFVKYIFYVSDVLMEGQWEKKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG
Sbjct: 181 ILATTAVSTFVKYIFYVSDVLMEGQWEKKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240

Query: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 300
           VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT
Sbjct: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 300

Query: 301 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTAGGHQGSQSDANQQGTGTT 360
           VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTAGGHQG QSDANQQGTGTT
Sbjct: 301 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTAGGHQGLQSDANQQGTGTT 360

Query: 361 SSSAQGSGGTGAVGDSLSHHQARVQAAAAAASIYEKSYVYPFANTLAWSPGYAV----QR 420
           SSSAQGSGGT A GDSLSHHQARVQAAAAAASIYEKSYVYPF NTLAWSPGYAV    QR
Sbjct: 361 SSSAQGSGGTSAAGDSLSHHQARVQAAAAAASIYEKSYVYPFGNTLAWSPGYAVVPQVQR 420

Query: 421 PLLDSNNVEPIGEQASNEQAQYFPFTSGPANLSFTQIPQNLFVPFQPREGTVNNTDGLGS 480
           PLLDSNNVEPIGEQA NEQAQYFPFT GPANLS TQIPQNLFVPFQPREGTVNNTDGLGS
Sbjct: 421 PLLDSNNVEPIGEQAPNEQAQYFPFTGGPANLSCTQIPQNLFVPFQPREGTVNNTDGLGS 480

Query: 481 SQNTSGSQLEAQERFLQQQIEILQDQLQLLRKLKVEDSSIAGEADKKGKSIASSSQSSSS 540
           SQN SGSQLE+QERFLQQQIEILQDQLQLLRKLKVE+SSIAGEADKKGKSIASSSQSSSS
Sbjct: 481 SQNISGSQLESQERFLQQQIEILQDQLQLLRKLKVEESSIAGEADKKGKSIASSSQSSSS 540

Query: 541 SVSDSHPPGETERTCG 552
           SVSDSHPPGETERT G
Sbjct: 541 SVSDSHPPGETERTVG 556

[Close]

BLAST of Cp4.1LG01g03290.1 vs. NCBI nr
Match: XP_023006862.1 (ERAD-associated E3 ubiquitin-protein ligase HRD1B-like isoform X2 [Cucurbita maxima] >XP_023006934.1 ERAD-associated E3 ubiquitin-protein ligase HRD1B-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 1010 bits (2612), Expect = 0.0
Identity = 537/556 (96.58%), Postives = 541/556 (97.30%), Query Frame = 0


Query: 1   MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVLMCILWQL 60
           MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVLMCILWQL
Sbjct: 1   MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVLMCILWQL 60

Query: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLAMVTALLLIKALHWLA 120
           TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLAMVTALLLIKALHWLA
Sbjct: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLAMVTALLLIKALHWLA 120

Query: 121 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFLYNSIGSLIQTRKASVSLFFSFEYM 180
           QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFLYNSIGSLIQTRKASVSLFFSFEYM
Sbjct: 121 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFLYNSIGSLIQTRKASVSLFFSFEYM 180

Query: 181 ILATTAVSTFVKYIFYVSDVLMEGQWEKKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240
           ILATTAVSTFVKYIFYVSDVLMEGQWEKKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG
Sbjct: 181 ILATTAVSTFVKYIFYVSDVLMEGQWEKKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240

Query: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 300
           VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT
Sbjct: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 300

Query: 301 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTAGGHQGSQSDANQQGTGTT 360
           VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTAGGHQG QSDANQQGTGTT
Sbjct: 301 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTAGGHQGLQSDANQQGTGTT 360

Query: 361 SSSAQGSGGTGAVGDSLSHHQARVQAAAAAASIYEKSYVYPFANTLAWSPGYAV----QR 420
           SSS QGSGGT A GDSLSHHQ+RVQAAAAAASIYEKSYVYPF NTLAWSPGYAV    QR
Sbjct: 361 SSSEQGSGGTSAAGDSLSHHQSRVQAAAAAASIYEKSYVYPFGNTLAWSPGYAVVPQVQR 420

Query: 421 PLLDSNNVEPIGEQASNEQAQYFPFTSGPANLSFTQIPQNLFVPFQPREGTVNNTDGLGS 480
           PLLDSNNVEPIGEQA+NEQAQYFPF  GPANLS+TQIPQNLFVPFQPREGTVNNTDGL S
Sbjct: 421 PLLDSNNVEPIGEQAANEQAQYFPFAGGPANLSYTQIPQNLFVPFQPREGTVNNTDGLSS 480

Query: 481 SQNTSGSQLEAQERFLQQQIEILQDQLQLLRKLKVEDSSIAGEADKKGKSIASSSQSSSS 540
            QN SGSQLEAQERFLQQQIEILQDQLQLLRKLKVE+SSIAGEADKKGKSIASSSQSSSS
Sbjct: 481 GQNISGSQLEAQERFLQQQIEILQDQLQLLRKLKVEESSIAGEADKKGKSIASSSQSSSS 540

Query: 541 SVSDSHPPGETERTCG 552
           SVSDSHPPGETERT G
Sbjct: 541 SVSDSHPPGETERTVG 556

[Close]

BLAST of Cp4.1LG01g03290.1 vs. NCBI nr
Match: XP_022942315.1 (ERAD-associated E3 ubiquitin-protein ligase HRD1B-like [Cucurbita moschata] >XP_022942316.1 ERAD-associated E3 ubiquitin-protein ligase HRD1B-like [Cucurbita moschata])

HSP 1 Score: 1010 bits (2612), Expect = 0.0
Identity = 538/556 (96.76%), Postives = 541/556 (97.30%), Query Frame = 0


Query: 1   MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVLMCILWQL 60
           MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVLMCILWQL
Sbjct: 1   MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVLMCILWQL 60

Query: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLAMVTALLLIKALHWLA 120
           TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLAMVTALLLIKALHWLA
Sbjct: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLAMVTALLLIKALHWLA 120

Query: 121 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFLYNSIGSLIQTRKASVSLFFSFEYM 180
           QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFLYNSIGSLIQTRKASVSLFFSFEYM
Sbjct: 121 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFLYNSIGSLIQTRKASVSLFFSFEYM 180

Query: 181 ILATTAVSTFVKYIFYVSDVLMEGQWEKKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240
           ILATTAVSTFVKYIFYVSDVLMEGQWEKKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG
Sbjct: 181 ILATTAVSTFVKYIFYVSDVLMEGQWEKKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240

Query: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 300
           VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT
Sbjct: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 300

Query: 301 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTAGGHQGSQSDANQQGTGTT 360
           VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTAGGHQG QSDAN QGTGTT
Sbjct: 301 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTAGGHQGLQSDANLQGTGTT 360

Query: 361 SSSAQGSGGTGAVGDSLSHHQARVQAAAAAASIYEKSYVYPFANTLAWSPGYAV----QR 420
           SSSAQGSGGT A GDSL HHQARVQAAAAAASIYEKSYVYPF NTLAWSPGYAV    QR
Sbjct: 361 SSSAQGSGGTSAAGDSLGHHQARVQAAAAAASIYEKSYVYPFGNTLAWSPGYAVIPQVQR 420

Query: 421 PLLDSNNVEPIGEQASNEQAQYFPFTSGPANLSFTQIPQNLFVPFQPREGTVNNTDGLGS 480
           PLLDSNNVEPIGEQA NEQAQYFPFT GPANLSFTQIPQNLF+PFQPREGTVNNTDGLGS
Sbjct: 421 PLLDSNNVEPIGEQAPNEQAQYFPFTGGPANLSFTQIPQNLFIPFQPREGTVNNTDGLGS 480

Query: 481 SQNTSGSQLEAQERFLQQQIEILQDQLQLLRKLKVEDSSIAGEADKKGKSIASSSQSSSS 540
           SQN SGSQLE+QERFLQQQIEILQDQLQLLRKLKVE+SSIAGEADKKGKSIASSSQSSSS
Sbjct: 481 SQNISGSQLESQERFLQQQIEILQDQLQLLRKLKVEESSIAGEADKKGKSIASSSQSSSS 540

Query: 541 SVSDSHPPGETERTCG 552
           SVSDSHP GETERT G
Sbjct: 541 SVSDSHPHGETERTVG 556

[Close]

BLAST of Cp4.1LG01g03290.1 vs. ExPASy TrEMBL
Match: A0A6J1KWZ5 (ERAD-associated E3 ubiquitin-protein ligase HRD1B-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111499418 PE=4 SV=1)

HSP 1 Score: 1010 bits (2612), Expect = 0.0
Identity = 537/556 (96.58%), Postives = 541/556 (97.30%), Query Frame = 0


Query: 1   MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVLMCILWQL 60
           MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVLMCILWQL
Sbjct: 1   MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVLMCILWQL 60

Query: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLAMVTALLLIKALHWLA 120
           TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLAMVTALLLIKALHWLA
Sbjct: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLAMVTALLLIKALHWLA 120

Query: 121 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFLYNSIGSLIQTRKASVSLFFSFEYM 180
           QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFLYNSIGSLIQTRKASVSLFFSFEYM
Sbjct: 121 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFLYNSIGSLIQTRKASVSLFFSFEYM 180

Query: 181 ILATTAVSTFVKYIFYVSDVLMEGQWEKKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240
           ILATTAVSTFVKYIFYVSDVLMEGQWEKKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG
Sbjct: 181 ILATTAVSTFVKYIFYVSDVLMEGQWEKKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240

Query: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 300
           VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT
Sbjct: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 300

Query: 301 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTAGGHQGSQSDANQQGTGTT 360
           VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTAGGHQG QSDANQQGTGTT
Sbjct: 301 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTAGGHQGLQSDANQQGTGTT 360

Query: 361 SSSAQGSGGTGAVGDSLSHHQARVQAAAAAASIYEKSYVYPFANTLAWSPGYAV----QR 420
           SSS QGSGGT A GDSLSHHQ+RVQAAAAAASIYEKSYVYPF NTLAWSPGYAV    QR
Sbjct: 361 SSSEQGSGGTSAAGDSLSHHQSRVQAAAAAASIYEKSYVYPFGNTLAWSPGYAVVPQVQR 420

Query: 421 PLLDSNNVEPIGEQASNEQAQYFPFTSGPANLSFTQIPQNLFVPFQPREGTVNNTDGLGS 480
           PLLDSNNVEPIGEQA+NEQAQYFPF  GPANLS+TQIPQNLFVPFQPREGTVNNTDGL S
Sbjct: 421 PLLDSNNVEPIGEQAANEQAQYFPFAGGPANLSYTQIPQNLFVPFQPREGTVNNTDGLSS 480

Query: 481 SQNTSGSQLEAQERFLQQQIEILQDQLQLLRKLKVEDSSIAGEADKKGKSIASSSQSSSS 540
            QN SGSQLEAQERFLQQQIEILQDQLQLLRKLKVE+SSIAGEADKKGKSIASSSQSSSS
Sbjct: 481 GQNISGSQLEAQERFLQQQIEILQDQLQLLRKLKVEESSIAGEADKKGKSIASSSQSSSS 540

Query: 541 SVSDSHPPGETERTCG 552
           SVSDSHPPGETERT G
Sbjct: 541 SVSDSHPPGETERTVG 556

[Close]

BLAST of Cp4.1LG01g03290.1 vs. ExPASy TrEMBL
Match: A0A6J1FNJ3 (ERAD-associated E3 ubiquitin-protein ligase HRD1B-like OS=Cucurbita moschata OX=3662 GN=LOC111447399 PE=4 SV=1)

HSP 1 Score: 1010 bits (2612), Expect = 0.0
Identity = 538/556 (96.76%), Postives = 541/556 (97.30%), Query Frame = 0


Query: 1   MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVLMCILWQL 60
           MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVLMCILWQL
Sbjct: 1   MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVLMCILWQL 60

Query: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLAMVTALLLIKALHWLA 120
           TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLAMVTALLLIKALHWLA
Sbjct: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLAMVTALLLIKALHWLA 120

Query: 121 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFLYNSIGSLIQTRKASVSLFFSFEYM 180
           QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFLYNSIGSLIQTRKASVSLFFSFEYM
Sbjct: 121 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFLYNSIGSLIQTRKASVSLFFSFEYM 180

Query: 181 ILATTAVSTFVKYIFYVSDVLMEGQWEKKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240
           ILATTAVSTFVKYIFYVSDVLMEGQWEKKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG
Sbjct: 181 ILATTAVSTFVKYIFYVSDVLMEGQWEKKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240

Query: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 300
           VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT
Sbjct: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 300

Query: 301 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTAGGHQGSQSDANQQGTGTT 360
           VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTAGGHQG QSDAN QGTGTT
Sbjct: 301 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTAGGHQGLQSDANLQGTGTT 360

Query: 361 SSSAQGSGGTGAVGDSLSHHQARVQAAAAAASIYEKSYVYPFANTLAWSPGYAV----QR 420
           SSSAQGSGGT A GDSL HHQARVQAAAAAASIYEKSYVYPF NTLAWSPGYAV    QR
Sbjct: 361 SSSAQGSGGTSAAGDSLGHHQARVQAAAAAASIYEKSYVYPFGNTLAWSPGYAVIPQVQR 420

Query: 421 PLLDSNNVEPIGEQASNEQAQYFPFTSGPANLSFTQIPQNLFVPFQPREGTVNNTDGLGS 480
           PLLDSNNVEPIGEQA NEQAQYFPFT GPANLSFTQIPQNLF+PFQPREGTVNNTDGLGS
Sbjct: 421 PLLDSNNVEPIGEQAPNEQAQYFPFTGGPANLSFTQIPQNLFIPFQPREGTVNNTDGLGS 480

Query: 481 SQNTSGSQLEAQERFLQQQIEILQDQLQLLRKLKVEDSSIAGEADKKGKSIASSSQSSSS 540
           SQN SGSQLE+QERFLQQQIEILQDQLQLLRKLKVE+SSIAGEADKKGKSIASSSQSSSS
Sbjct: 481 SQNISGSQLESQERFLQQQIEILQDQLQLLRKLKVEESSIAGEADKKGKSIASSSQSSSS 540

Query: 541 SVSDSHPPGETERTCG 552
           SVSDSHP GETERT G
Sbjct: 541 SVSDSHPHGETERTVG 556

[Close]

BLAST of Cp4.1LG01g03290.1 vs. ExPASy TrEMBL
Match: A0A6J1CJF5 (ERAD-associated E3 ubiquitin-protein ligase HRD1B-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111011717 PE=4 SV=1)

HSP 1 Score: 939 bits (2428), Expect = 0.0
Identity = 504/554 (90.97%), Postives = 517/554 (93.32%), Query Frame = 0


Query: 1   MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVLMCILWQL 60
           MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLV+MCILWQL
Sbjct: 1   MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQL 60

Query: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLAMVTALLLIKALHWLA 120
           TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFL MVTALLLIKALHWLA
Sbjct: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLGMVTALLLIKALHWLA 120

Query: 121 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFLYNSIGSLIQTRKASVSLFFSFEYM 180
           QKRVEYMETTPSVPLLSHIRIVSFL FLF+LDSLF YNSI  LI+TRKASVSLFFSFEYM
Sbjct: 121 QKRVEYMETTPSVPLLSHIRIVSFLSFLFILDSLFFYNSIEYLIRTRKASVSLFFSFEYM 180

Query: 181 ILATTAVSTFVKYIFYVSDVLMEGQWEKKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240
           ILATTAVSTFVKYIFYVSDVLMEGQWEKKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG
Sbjct: 181 ILATTAVSTFVKYIFYVSDVLMEGQWEKKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240

Query: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 300
           VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT
Sbjct: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 300

Query: 301 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTAGGHQGSQSDANQQGTGTT 360
           VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTAGGH GS  DANQQGTGTT
Sbjct: 301 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTAGGHHGSH-DANQQGTGTT 360

Query: 361 SSSAQGSGGTGAVGDSLSHHQARVQAAAAAASIYEKSYVYPFANTLAWSPGYAV----QR 420
           SSSAQ S GTG  GD+LSHHQARVQAAAAAASIYEKSYVYP A+TL WSPGYAV    QR
Sbjct: 361 SSSAQDSSGTGVAGDNLSHHQARVQAAAAAASIYEKSYVYPCASTLVWSPGYAVVPQTQR 420

Query: 421 PLLDSNNVEPIGEQASNEQAQYFPFTSGPANLSFTQIPQNLFVPFQPREGTVNNTDGLGS 480
           PL DSNN+EP GEQA N Q QYFPFT GPANLSFTQ PQNLFVPFQPREG+VNNTDGLGS
Sbjct: 421 PLADSNNIEPNGEQAPNGQPQYFPFTGGPANLSFTQFPQNLFVPFQPREGSVNNTDGLGS 480

Query: 481 SQNTSGSQLEAQERFLQQQIEILQDQLQLLRKLKVEDSSIAGEADKKGKSIASSSQSSSS 540
           SQN SG  LE QERF+QQQIE+LQ QLQLLR  KVE+S+ AGEADKKGKS+ASS  SSSS
Sbjct: 481 SQNVSGLHLEDQERFIQQQIEMLQKQLQLLRNPKVEESTRAGEADKKGKSVASSPPSSSS 540

Query: 541 SVSDSHPP-GETER 549
           SVS+SHPP GE ER
Sbjct: 541 SVSESHPPAGEIER 553

[Close]

BLAST of Cp4.1LG01g03290.1 vs. ExPASy TrEMBL
Match: A0A6J1CI55 (ERAD-associated E3 ubiquitin-protein ligase HRD1B-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111011717 PE=4 SV=1)

HSP 1 Score: 931 bits (2406), Expect = 0.0
Identity = 502/554 (90.61%), Postives = 515/554 (92.96%), Query Frame = 0


Query: 1   MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVLMCILWQL 60
           MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLV+MCILWQL
Sbjct: 1   MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQL 60

Query: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLAMVTALLLIKALHWLA 120
           TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFL MVTALLLIKALHWLA
Sbjct: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLGMVTALLLIKALHWLA 120

Query: 121 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFLYNSIGSLIQTRKASVSLFFSFEYM 180
           QKRVEYMETTPSVPLLSHIRIVSFL FLF+LDSLF YNSI  LI+TRKASVSLFFSFEYM
Sbjct: 121 QKRVEYMETTPSVPLLSHIRIVSFLSFLFILDSLFFYNSIEYLIRTRKASVSLFFSFEYM 180

Query: 181 ILATTAVSTFVKYIFYVSDVLMEGQWEKKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240
           ILATTAVSTFVKYIFYVSDVLMEGQWEKKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG
Sbjct: 181 ILATTAVSTFVKYIFYVSDVLMEGQWEKKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240

Query: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 300
           VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT
Sbjct: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 300

Query: 301 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTAGGHQGSQSDANQQGTGTT 360
           VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTAGGH GS  DANQQGT  T
Sbjct: 301 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTAGGHHGSH-DANQQGT--T 360

Query: 361 SSSAQGSGGTGAVGDSLSHHQARVQAAAAAASIYEKSYVYPFANTLAWSPGYAV----QR 420
           SSSAQ S GTG  GD+LSHHQARVQAAAAAASIYEKSYVYP A+TL WSPGYAV    QR
Sbjct: 361 SSSAQDSSGTGVAGDNLSHHQARVQAAAAAASIYEKSYVYPCASTLVWSPGYAVVPQTQR 420

Query: 421 PLLDSNNVEPIGEQASNEQAQYFPFTSGPANLSFTQIPQNLFVPFQPREGTVNNTDGLGS 480
           PL DSNN+EP GEQA N Q QYFPFT GPANLSFTQ PQNLFVPFQPREG+VNNTDGLGS
Sbjct: 421 PLADSNNIEPNGEQAPNGQPQYFPFTGGPANLSFTQFPQNLFVPFQPREGSVNNTDGLGS 480

Query: 481 SQNTSGSQLEAQERFLQQQIEILQDQLQLLRKLKVEDSSIAGEADKKGKSIASSSQSSSS 540
           SQN SG  LE QERF+QQQIE+LQ QLQLLR  KVE+S+ AGEADKKGKS+ASS  SSSS
Sbjct: 481 SQNVSGLHLEDQERFIQQQIEMLQKQLQLLRNPKVEESTRAGEADKKGKSVASSPPSSSS 540

Query: 541 SVSDSHPP-GETER 549
           SVS+SHPP GE ER
Sbjct: 541 SVSESHPPAGEIER 551

[Close]

BLAST of Cp4.1LG01g03290.1 vs. ExPASy TrEMBL
Match: A0A0A0LJG4 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G013330 PE=4 SV=1)

HSP 1 Score: 913 bits (2360), Expect = 0.0
Identity = 493/555 (88.83%), Postives = 510/555 (91.89%), Query Frame = 0


Query: 1   MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVLMCILWQL 60
           MMKLQTYAGISFIATI+VIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLV+MCILWQL
Sbjct: 1   MMKLQTYAGISFIATIMVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQL 60

Query: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLAMVTALLLIKALHWLA 120
           TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFL MVTALLLIKALHWLA
Sbjct: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLGMVTALLLIKALHWLA 120

Query: 121 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFLYNSIGSLIQTRKASVSLFFSFEYM 180
           QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLF YNSI SLIQTRKASVSLFFSFEYM
Sbjct: 121 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFFYNSIDSLIQTRKASVSLFFSFEYM 180

Query: 181 ILATTAVSTFVKYIFYVSDVLMEGQWEKKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240
           ILATTAVSTFVKYIFYVSDVLMEGQWE+KPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG
Sbjct: 181 ILATTAVSTFVKYIFYVSDVLMEGQWERKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240

Query: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 300
           VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT
Sbjct: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 300

Query: 301 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTAGGHQGSQSDANQQGTGTT 360
           VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSST  GH G QSDANQQGTGTT
Sbjct: 301 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTTTGHHGVQSDANQQGTGTT 360

Query: 361 SSSAQGSGGTGAVGDSLSHHQARVQAAAAAASIYEKSYVYPFANTLAWSPGYAV----QR 420
           SSSAQG+ GTG   D+LSHHQARV+AAAAAASIYEKSYVYP A+TL WS GYAV    +R
Sbjct: 361 SSSAQGTSGTGVTNDNLSHHQARVRAAAAAASIYEKSYVYPCASTLVWSLGYAVVPQVER 420

Query: 421 PLLDSNNVEPIGEQASNEQAQYFPFTSGPANLSFTQIPQNLFVPFQPREGTVNNTDGLGS 480
           PL DSNN E  GEQ+ N   QYF F  GP+NLSFTQ PQN+FVPFQPREGT NN + LGS
Sbjct: 421 PLFDSNNTETNGEQSPNGHPQYFSFPGGPSNLSFTQFPQNIFVPFQPREGTGNNIEELGS 480

Query: 481 SQNTSGSQLEAQERFLQQQIEILQDQLQLLRKLKVEDSSI-AGEADKKGKSIASSSQSSS 540
           S N SGSQLEAQE+FLQQQIE LQ+QLQLLRK KVE+SS  A EADKKGKS+A S  SS+
Sbjct: 481 SLNVSGSQLEAQEKFLQQQIEFLQNQLQLLRKPKVEESSRGASEADKKGKSLAISPSSSA 540

Query: 541 S-SVSDSHPPGETER 549
           S S SDSHPPGETER
Sbjct: 541 SLSSSDSHPPGETER 555

[Close]

BLAST of Cp4.1LG01g03290.1 vs. TAIR 10
Match: AT3G16090.1 (RING/U-box superfamily protein )

HSP 1 Score: 610.1 bits (1572), Expect = 3.0e-174
Identity = 344/535 (64.30%), Postives = 402/535 (75.14%), Query Frame = 0


Query: 1   MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVLMCILWQL 60
           M++L+TYAG+SF+AT+ VIYHAF+SRGQFYPA VYLSTSKI+LVLLLNM LVLM  LW L
Sbjct: 1   MIRLRTYAGLSFMATLAVIYHAFSSRGQFYPATVYLSTSKISLVLLLNMCLVLMLSLWHL 60

Query: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLAMVTALLLIKALHWLA 120
            K +FLGSLREAEVERLNEQ+W+ELMEILFAITIFRQDFS  FL +V  LLLIKALHWLA
Sbjct: 61  VKFVFLGSLREAEVERLNEQAWRELMEILFAITIFRQDFSSGFLPLVVTLLLIKALHWLA 120

Query: 121 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFLYNSIGSLIQTRKASVSLFFSFEYM 180
           QKRVEY+ETTPSV  LSH RIVSF+GFL ++DSLF+Y+SI  LIQ+R+ASVSLFFSFEYM
Sbjct: 121 QKRVEYIETTPSVSKLSHFRIVSFMGFLLLVDSLFMYSSIRHLIQSRQASVSLFFSFEYM 180

Query: 181 ILATTAVSTFVKYIFYVSDVLMEGQWEKKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240
           ILATT V+ FVKY+FYV+D+LM+GQWEKKPVYTFYLELIRDLLHLSMY+CFF VIFM YG
Sbjct: 181 ILATTTVAIFVKYVFYVTDMLMDGQWEKKPVYTFYLELIRDLLHLSMYICFFFVIFMNYG 240

Query: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 300
           VPLHL+RELYE FRNF+IR++DY+RYRKITSNMNDRFPDATPEEL +SDATCIICREEMT
Sbjct: 241 VPLHLLRELYETFRNFQIRVSDYLRYRKITSNMNDRFPDATPEELTASDATCIICREEMT 300

Query: 301 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTAGGHQGSQSDANQQGTGTT 360
            AKKL+CGHLFHVHCLRSWLERQ TCPTCRALVVPPE +++A   Q      +QQ  GT+
Sbjct: 301 NAKKLICGHLFHVHCLRSWLERQQTCPTCRALVVPPENATSAAPGQRELHQGSQQ--GTS 360

Query: 361 SSSAQG---SGGTGAVGDSLSHHQARVQAAAAAASIYEKSYVYPFANTLAWSPGYAVQRP 420
           SS  QG   S   G   +SLS H AR+QAAA+AAS+Y KS VYP ANT+AWS G      
Sbjct: 361 SSGNQGSEISSSAGVSNNSLSRHHARLQAAASAASVYGKSMVYPSANTVAWSSGV----- 420

Query: 421 LLDSNNVEPIGEQASNEQAQYFPFTSGPANLSFTQIPQNLFVPFQPREGTVNNTDGLGSS 480
                   P  EQ S E  Q  P  + P   S                          + 
Sbjct: 421 --------PGTEQVSTEPDQTLPQHNLPVENSH-------------------------AY 480

Query: 481 QNTSGSQLEAQERFLQQQIEILQDQLQLLRKLKVEDSSIAGEADKKGKSIASSSQ 533
            N S ++LE   + L+  +EIL+++L  L   K E    AGE + KGKS+A +++
Sbjct: 481 ANMSETKLEEMRKSLETHLEILRNRLHFLETRKPES---AGEPENKGKSVADAAE 492

[Close]

BLAST of Cp4.1LG01g03290.1 vs. TAIR 10
Match: AT1G65040.2 (RING/U-box superfamily protein )

HSP 1 Score: 598.6 bits (1542), Expect = 9.1e-171
Identity = 335/533 (62.85%), Postives = 396/533 (74.30%), Query Frame = 0


Query: 1   MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVLMCILWQL 60
           M++L+ YAG+S +AT+VVIYHAF+SRGQFYPA VYLSTSKINLV+LLNMGLVLM  LW L
Sbjct: 1   MIQLKVYAGLSTLATLVVIYHAFSSRGQFYPATVYLSTSKINLVVLLNMGLVLMLSLWNL 60

Query: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLAMVTALLLIKALHWLA 120
            K +FLGSLREAEVERLNEQ+W+ELMEILFAITIFRQDFSV F+++V  LLLIK LHW+A
Sbjct: 61  VKIVFLGSLREAEVERLNEQAWRELMEILFAITIFRQDFSVGFISLVVTLLLIKGLHWMA 120

Query: 121 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFLYNSIGSLIQTRKASVSLFFSFEYM 180
           QKRVEY+ETTPSV LLSH+RIVSF+ FL +LD L  Y+SI  LIQ+RKAS+S+FF+FEYM
Sbjct: 121 QKRVEYIETTPSVTLLSHVRIVSFMVFLLILDCLLTYSSIQQLIQSRKASMSVFFTFEYM 180

Query: 181 ILATTAVSTFVKYIFYVSDVLMEGQWEKKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240
           ILATT VS  VKY FYV+D+L EGQWE KPVYTFYLEL+RDLLHLSMYLCFFL+IFM YG
Sbjct: 181 ILATTTVSIIVKYAFYVTDMLKEGQWEGKPVYTFYLELVRDLLHLSMYLCFFLMIFMNYG 240

Query: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 300
           +PLHLIRELYE FRNF+IR+ DY+RYRKITSNMNDRFPDATPEEL+S+DATCIICREEMT
Sbjct: 241 LPLHLIRELYETFRNFKIRVTDYLRYRKITSNMNDRFPDATPEELSSNDATCIICREEMT 300

Query: 301 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPE-GSSTAGGHQGSQSDANQQGTGT 360
            AKKLVCGHLFHVHCLRSWLERQ+TCPTCRALVVP E  +STA G++G   ++ QQGTGT
Sbjct: 301 SAKKLVCGHLFHVHCLRSWLERQNTCPTCRALVVPAENATSTASGNRGPHQESLQQGTGT 360

Query: 361 TSSSAQGSGGTGAVGDSLSHHQARVQAAAAAASIYEKSYVYP-FANTLAWSPGYAVQRPL 420
           +SS  QGS  + A  +++S H+AR QAAA+AASIY +S VYP  ANTL WS G ++    
Sbjct: 361 SSSDGQGSSVSAAASENMSRHEARFQAAASAASIYGRSIVYPSSANTLVWSQGNSL---- 420

Query: 421 LDSNNVEPIGEQASNEQAQYFPFTSGPANLSFTQIPQNLFVPFQPREGTVNNTDGLGSSQ 480
                                             +PQ                       
Sbjct: 421 ----------------------------------LPQ----------------------- 460

Query: 481 NTSGSQLEAQERFLQQQIEILQDQLQLLRKLKVEDSSIAGEADKKGKSIASSS 532
               +++EAQ RFL+ QIE+L +QL+LL K            D KGKS+A ++
Sbjct: 481 ----TEVEAQRRFLESQIEVLTNQLRLLEK--------PTTVDTKGKSVADTA 460

[Close]

BLAST of Cp4.1LG01g03290.1 vs. TAIR 10
Match: AT4G33430.1 (BRI1-associated receptor kinase )

HSP 1 Score: 531.6 bits (1368), Expect = 1.4e-150
Identity = 320/604 (52.98%), Postives = 358/604 (59.27%), Query Frame = 0


Query: 569 WIILVLRFVSLLSANPEGDALYALKSNLQDPNSVLQSWDPTLVNPCTWFHVTCDNVNTVI 628
           W+ILVL  V  +S N EGDAL ALK++L DPN VLQSWD TLV PCTWFHVTC++ N+V 
Sbjct: 12  WLILVLDLVLRVSGNAEGDALSALKNSLADPNKVLQSWDATLVTPCTWFHVTCNSDNSVT 71

Query: 629 RVDLGNANLSGTLVPQLGQLSSLQ--ELYSNNISGGIPEELGDLTNLVSLDLYLNNLTGH 688
           RVDLGNANLSG LV QLGQL +LQ  ELYSNNI+G IPE+LG+LT LVSLDLYLNNL+G 
Sbjct: 72  RVDLGNANLSGQLVMQLGQLPNLQYLELYSNNITGTIPEQLGNLTELVSLDLYLNNLSGP 131

Query: 689 IPVTLGQLDNLRFLRLNNNSLTGTIPMSLTKVKSLQVLDLSYNHLTGDIPINGSFSLFTP 748
           IP TLG+L  LRFLRLNNNSL+G IP SLT V +LQVLDLS N LTGDIP+NGSFSLFTP
Sbjct: 132 IPSTLGRLKKLRFLRLNNNSLSGEIPRSLTAVLTLQVLDLSNNPLTGDIPVNGSFSLFTP 191

Query: 749 ISFANNNLNESAVRPPP--SPLPSSPTPTS------------------------------ 808
           ISFAN  L      PPP  SP P SP  ++                              
Sbjct: 192 ISFANTKLTPLPASPPPPISPTPPSPAGSNRITGAIAGGVAAGAALLFAVPAIALAWWRR 251

Query: 809 -----------AEEDPEVHLGQLKRFSLRELQVATDNFSNKNILGRGGFGKVYKGRLADG 868
                      AEEDPEVHLGQLKRFSLRELQVA+DNFSNKNILGRGGFGKVYKGRLADG
Sbjct: 252 KKPQDHFFDVPAEEDPEVHLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADG 311

Query: 869 SLVAVKRLKEERSQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERVLVYPYM----- 928
           +LVAVKRLKEER+QGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTER+LVYPYM     
Sbjct: 312 TLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSV 371

Query: 929 ------------------------------------------------------------ 983
                                                                       
Sbjct: 372 ASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAV 431

[Close]

BLAST of Cp4.1LG01g03290.1 vs. TAIR 10
Match: AT1G34210.1 (somatic embryogenesis receptor-like kinase 2 )

HSP 1 Score: 528.1 bits (1359), Expect = 1.5e-149
Identity = 319/627 (50.88%), Postives = 362/627 (57.74%), Query Frame = 0


Query: 555 VCVMSVMLRSSSSLWIILVLRFVSLLSANPEGDALYALKSNLQDPNSVLQSWDPTLVNPC 614
           VC++S++L   +SLW         L S+N EGDAL++L++NL DPN+VLQSWDPTLVNPC
Sbjct: 12  VCLISLLL-LFNSLW---------LASSNMEGDALHSLRANLVDPNNVLQSWDPTLVNPC 71

Query: 615 TWFHVTCDNVNTVIRVDLGNANLSGTLVPQLGQLSSLQ--ELYSNNISGGIPEELGDLTN 674
           TWFHVTC+N N+VIRVDLGNA+LSG LVPQLGQL +LQ  ELYSNNI+G +P +LG+LTN
Sbjct: 72  TWFHVTCNNENSVIRVDLGNADLSGQLVPQLGQLKNLQYLELYSNNITGPVPSDLGNLTN 131

Query: 675 LVSLDLYLNNLTGHIPVTLGQLDNLRFLRLNNNSLTGTIPMSLTKVKSLQVLDLSYNHLT 734
           LVSLDLYLN+ TG IP +LG+L  LRFLRLNNNSLTG IPMSLT + +LQVLDLS N L+
Sbjct: 132 LVSLDLYLNSFTGPIPDSLGKLFKLRFLRLNNNSLTGPIPMSLTNIMTLQVLDLSNNRLS 191

Query: 735 GDIPINGSFSLFTPISFANN-----------NLNESAVRPPPS--PLPSSPTP------- 794
           G +P NGSFSLFTPISFANN                   PPP   P P  PTP       
Sbjct: 192 GSVPDNGSFSLFTPISFANNLDLCGPVTSRPCPGSPPFSPPPPFIPPPIVPTPGGYSATG 251

Query: 795 -----------------------------------TSAEEDPEVHLGQLKRFSLRELQVA 854
                                                AEEDPEVHLGQLKRFSLRELQVA
Sbjct: 252 AIAGGVAAGAALLFAAPALAFAWWRRRKPQEFFFDVPAEEDPEVHLGQLKRFSLRELQVA 311

Query: 855 TDNFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERSQGGELQFQTEVEMISMAVHRN 914
           TD+FSNKNILGRGGFGKVYKGRLADG+LVAVKRLKEER+ GGELQFQTEVEMISMAVHRN
Sbjct: 312 TDSFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTPGGELQFQTEVEMISMAVHRN 371

Query: 915 LLRLRGFCMTPTERVLVYPYM--------------------------------------- 974
           LLRLRGFCMTPTER+LVYPYM                                       
Sbjct: 372 LLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLAWSIRQQIALGSARGLSYLH 431

Query: 975 ------------------------------------------------------------ 983
                                                                       
Sbjct: 432 DHCDPKIIHRDVKAANILLDEEFEAVVGDFGLARLMDYKDTHVTTAVRGTIGHIAPEYLS 491

[Close]

BLAST of Cp4.1LG01g03290.1 vs. TAIR 10
Match: AT1G71830.1 (somatic embryogenesis receptor-like kinase 1 )

HSP 1 Score: 516.5 bits (1329), Expect = 4.6e-146
Identity = 311/629 (49.44%), Postives = 359/629 (57.07%), Query Frame = 0


Query: 553 ILVCVMSVMLRSSSSLWIILVLRFVSLLSANPEGDALYALKSNLQDPNSVLQSWDPTLVN 612
           ++  ++S++L  + SLW         L SAN EGDAL+ L+  L DPN+VLQSWDPTLVN
Sbjct: 6   VVFILLSLILLPNHSLW---------LASANLEGDALHTLRVTLVDPNNVLQSWDPTLVN 65

Query: 613 PCTWFHVTCDNVNTVIRVDLGNANLSGTLVPQLGQLSSLQ--ELYSNNISGGIPEELGDL 672
           PCTWFHVTC+N N+VIRVDLGNA LSG LVP+LG L +LQ  ELYSNNI+G IP  LG+L
Sbjct: 66  PCTWFHVTCNNENSVIRVDLGNAELSGHLVPELGVLKNLQYLELYSNNITGPIPSNLGNL 125

Query: 673 TNLVSLDLYLNNLTGHIPVTLGQLDNLRFLRLNNNSLTGTIPMSLTKVKSLQVLDLSYNH 732
           TNLVSLDLYLN+ +G IP +LG+L  LRFLRLNNNSLTG+IPMSLT + +LQVLDLS N 
Sbjct: 126 TNLVSLDLYLNSFSGPIPESLGKLSKLRFLRLNNNSLTGSIPMSLTNITTLQVLDLSNNR 185

Query: 733 LTGDIPINGSFSLFTPISFANN-------NLNESAVRPPPSPLPS--SPTPTS------- 792
           L+G +P NGSFSLFTPISFANN         +     PP SP P    P P S       
Sbjct: 186 LSGSVPDNGSFSLFTPISFANNLDLCGPVTSHPCPGSPPFSPPPPFIQPPPVSTPSGYGI 245

Query: 793 ---------------------------------------AEEDPEVHLGQLKRFSLRELQ 852
                                                  AEEDPEVHLGQLKRFSLRELQ
Sbjct: 246 TGAIAGGVAAGAALLFAAPAIAFAWWRRRKPLDIFFDVPAEEDPEVHLGQLKRFSLRELQ 305

Query: 853 VATDNFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERSQGGELQFQTEVEMISMAVH 912
           VA+D FSNKNILGRGGFGKVYKGRLADG+LVAVKRLKEER+ GGELQFQTEVEMISMAVH
Sbjct: 306 VASDGFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTPGGELQFQTEVEMISMAVH 365

Query: 913 RNLLRLRGFCMTPTERVLVYPYM------------------------------------- 972
           RNLLRLRGFCMTPTER+LVYPYM                                     
Sbjct: 366 RNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQPPLDWPTRKRIALGSARGLSY 425

Query: 973 ------------------------------------------------------------ 983
                                                                       
Sbjct: 426 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY 485

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g03290.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LW77	4.3e-173	64.30	ERAD-associated E3 ubiquitin-protein ligase HRD1A OS=Arabidopsis thaliana OX=370...	[more]
Q6NPT7	1.3e-169	62.85	ERAD-associated E3 ubiquitin-protein ligase HRD1B OS=Arabidopsis thaliana OX=370...	[more]
Q5Z880	3.5e-159	61.25	ERAD-associated E3 ubiquitin-protein ligase HRD1 OS=Oryza sativa subsp. japonica...	[more]
B8BB68	1.5e-149	51.62	LRR receptor kinase BAK1 OS=Oryza sativa subsp. indica OX=39946 GN=BAK1 PE=2 SV=...	[more]
Q6Z4U4	1.5e-149	51.62	LRR receptor kinase BAK1 OS=Oryza sativa subsp. japonica OX=39947 GN=BAK1 PE=1 S...	[more]

BLAST of Cp4.1LG01g03290.1 vs. NCBI nr


Match Name	Identity	Description
XP_023531768.1	99.10	ERAD-associated E3 ubiquitin-protein ligase HRD1B-like [Cucurbita pepo subsp. pe...	[more]
KAG6600225.1	96.96	ERAD-associated E3 ubiquitin-protein ligase HRD1A, partial [Cucurbita argyrosper...	[more]
KAG7030884.1	97.30	ERAD-associated E3 ubiquitin-protein ligase HRD1A [Cucurbita argyrosperma subsp....	[more]
XP_023006862.1	96.58	ERAD-associated E3 ubiquitin-protein ligase HRD1B-like isoform X2 [Cucurbita max...	[more]
XP_022942315.1	96.76	ERAD-associated E3 ubiquitin-protein ligase HRD1B-like [Cucurbita moschata] >XP_...	[more]

BLAST of Cp4.1LG01g03290.1 vs. ExPASy TrEMBL


Match Name	Identity	Description
A0A6J1KWZ5	96.58	ERAD-associated E3 ubiquitin-protein ligase HRD1B-like isoform X2 OS=Cucurbita m...	[more]
A0A6J1FNJ3	96.76	ERAD-associated E3 ubiquitin-protein ligase HRD1B-like OS=Cucurbita moschata OX=...	[more]
A0A6J1CJF5	90.97	ERAD-associated E3 ubiquitin-protein ligase HRD1B-like isoform X1 OS=Momordica c...	[more]
A0A6J1CI55	90.61	ERAD-associated E3 ubiquitin-protein ligase HRD1B-like isoform X2 OS=Momordica c...	[more]
A0A0A0LJG4	88.83	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G013330 P...	[more]

BLAST of Cp4.1LG01g03290.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G16090.1	3.0e-174	64.30	RING/U-box superfamily protein	[more]
AT1G65040.2	9.1e-171	62.85	RING/U-box superfamily protein	[more]
AT4G33430.1	1.4e-150	52.98	BRI1-associated receptor kinase	[more]
AT1G34210.1	1.5e-149	50.88	somatic embryogenesis receptor-like kinase 2	[more]
AT1G71830.1	4.6e-146	49.44	somatic embryogenesis receptor-like kinase 1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 482..509
None	No IPR available	GENE3D	3.30.200.20	Phosphorylase Kinase; domain 1	coord: 772..877 e-value: 4.1E-40 score: 138.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 755..779
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 525..544
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 341..374
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 337..377
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 520..547
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 950..982
None	No IPR available	PANTHER	PTHR22763	RING ZINC FINGER PROTEIN	coord: 1..458
None	No IPR available	PANTHER	PTHR22763:SF174	SUBFAMILY NOT NAMED	coord: 1..458
None	No IPR available	CDD	cd00890	Prefoldin	coord: 484..512 e-value: 0.00637405 score: 35.7693
None	No IPR available	CDD	cd16479	RING-H2_synoviolin	coord: 289..330 e-value: 1.62117E-27 score: 103.532
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 272..336
None	No IPR available	SUPERFAMILY	52058	L domain-like	coord: 584..757
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 292..329 e-value: 2.0E-5 score: 34.1
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 291..330 e-value: 2.4E-10 score: 40.6
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 292..330 score: 12.415513
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 264..336 e-value: 1.1E-22 score: 81.1
IPR000719	Protein kinase domain	PFAM	PF00069	Pkinase	coord: 802..886 e-value: 1.6E-12 score: 47.3
IPR000719	Protein kinase domain	PROSITE	PS50011	PROTEIN_KINASE_DOM	coord: 801..982 score: 10.223842
IPR032675	Leucine-rich repeat domain superfamily	GENE3D	3.80.10.10	Ribonuclease Inhibitor	coord: 582..760 e-value: 2.2E-53 score: 182.4
IPR013210	Leucine-rich repeat-containing N-terminal, plant-type	PFAM	PF08263	LRRNT_2	coord: 582..622 e-value: 1.9E-11 score: 44.0
IPR017441	Protein kinase, ATP binding site	PROSITE	PS00107	PROTEIN_KINASE_ATP	coord: 807..829
IPR011009	Protein kinase-like domain superfamily	SUPERFAMILY	56112	Protein kinase-like (PK-like)	coord: 769..886

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cp4.1LG01g03290	Cp4.1LG01g03290	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG01g03290.1:exon:001	Cp4.1LG01g03290.1:exon:001	exon
Cp4.1LG01g03290.1:exon:002	Cp4.1LG01g03290.1:exon:002	exon
Cp4.1LG01g03290.1:exon:003	Cp4.1LG01g03290.1:exon:003	exon
Cp4.1LG01g03290.1:exon:004	Cp4.1LG01g03290.1:exon:004	exon
Cp4.1LG01g03290.1:exon:005	Cp4.1LG01g03290.1:exon:005	exon
Cp4.1LG01g03290.1:exon:006	Cp4.1LG01g03290.1:exon:006	exon
Cp4.1LG01g03290.1:exon:007	Cp4.1LG01g03290.1:exon:007	exon
Cp4.1LG01g03290.1:exon:008	Cp4.1LG01g03290.1:exon:008	exon
Cp4.1LG01g03290.1:exon:009	Cp4.1LG01g03290.1:exon:009	exon
Cp4.1LG01g03290.1:exon:010	Cp4.1LG01g03290.1:exon:010	exon
Cp4.1LG01g03290.1:exon:011	Cp4.1LG01g03290.1:exon:011	exon
Cp4.1LG01g03290.1:exon:012	Cp4.1LG01g03290.1:exon:012	exon
Cp4.1LG01g03290.1:exon:013	Cp4.1LG01g03290.1:exon:013	exon
Cp4.1LG01g03290.1:exon:014	Cp4.1LG01g03290.1:exon:014	exon
Cp4.1LG01g03290.1:exon:015	Cp4.1LG01g03290.1:exon:015	exon
Cp4.1LG01g03290.1:exon:016	Cp4.1LG01g03290.1:exon:016	exon
Cp4.1LG01g03290.1:exon:017	Cp4.1LG01g03290.1:exon:017	exon
Cp4.1LG01g03290.1:exon:018	Cp4.1LG01g03290.1:exon:018	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG01g03290.1:five_prime_utr:002	Cp4.1LG01g03290.1:five_prime_utr:002	five_prime_UTR
Cp4.1LG01g03290.1:five_prime_utr:001	Cp4.1LG01g03290.1:five_prime_utr:001	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG01g03290.1:cds:017	Cp4.1LG01g03290.1:cds:017	CDS
Cp4.1LG01g03290.1:cds:016	Cp4.1LG01g03290.1:cds:016	CDS
Cp4.1LG01g03290.1:cds:015	Cp4.1LG01g03290.1:cds:015	CDS
Cp4.1LG01g03290.1:cds:014	Cp4.1LG01g03290.1:cds:014	CDS
Cp4.1LG01g03290.1:cds:013	Cp4.1LG01g03290.1:cds:013	CDS
Cp4.1LG01g03290.1:cds:012	Cp4.1LG01g03290.1:cds:012	CDS
Cp4.1LG01g03290.1:cds:011	Cp4.1LG01g03290.1:cds:011	CDS
Cp4.1LG01g03290.1:cds:010	Cp4.1LG01g03290.1:cds:010	CDS
Cp4.1LG01g03290.1:cds:009	Cp4.1LG01g03290.1:cds:009	CDS
Cp4.1LG01g03290.1:cds:008	Cp4.1LG01g03290.1:cds:008	CDS
Cp4.1LG01g03290.1:cds:007	Cp4.1LG01g03290.1:cds:007	CDS
Cp4.1LG01g03290.1:cds:006	Cp4.1LG01g03290.1:cds:006	CDS
Cp4.1LG01g03290.1:cds:005	Cp4.1LG01g03290.1:cds:005	CDS
Cp4.1LG01g03290.1:cds:004	Cp4.1LG01g03290.1:cds:004	CDS
Cp4.1LG01g03290.1:cds:003	Cp4.1LG01g03290.1:cds:003	CDS
Cp4.1LG01g03290.1:cds:002	Cp4.1LG01g03290.1:cds:002	CDS
Cp4.1LG01g03290.1:cds:001	Cp4.1LG01g03290.1:cds:001	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG01g03290.1:three_prime_utr:001	Cp4.1LG01g03290.1:three_prime_utr:001	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG01g03290.1	Cp4.1LG01g03290.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006468	protein phosphorylation
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004672	protein kinase activity
molecular_function	GO:0061630	ubiquitin protein ligase activity