CmoCh20G005930.1 (mRNA) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh20G005930.1
Type	mRNA
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	transcription factor MYB30-like
Location	Cmo_Chr20: 2922125 .. 2928897 (-)
Sequence length	1410
RNA-Seq Expression	CmoCh20G005930.1
Synteny	CmoCh20G005930.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGAAGAGGGTGATGAGAGAGAGAGAGAAGAGGGTGATGAGAGAGAGAGAGAAGATGGTGAAAATGGAAGAAGAAAGGGTAGATGGAGTAAGGAGGAAGATGAGAAACTTAGAGCTTATGTTACCAAATATGGCTCTTGGAATTGGCGCTTAATTCCCAAGTTTGCAGGTAATTCATTCATTCATTATGAACTAATTAATTCATGTTTGGTCACTTAGTTTTACTAATAAACATGAACATGATGGTACCGTTTAGGTCTATCCCGATGTGGAAAAAGCTGTAGATTGCGTTGGATGAACTACTTGGCGCCTGATATTAAAAGAGGGAACTTCCAAAAGGAAGAGGATCAAACCATCCTTCGATTGCAAGCAACTCTCGGAAATAGGTCATCTGTAACAGCCCAGATACACCACTAGCAGATATTGTCTTTTTTGAGTTTTCCCTTTTGAGCTTTCCTCAAGGCTTTAAAACGCATCTATTCCTTATAAAAAGTGTTTCGTTCTCCTCCCAATCAATGTGGGATTCTCACGTCATTTTTGTTGAGGATTGTTGGGAGGGAGTTGCACCTTGACTAAATGATCATGGGCTTAAAATACCTCTCCATTGGTAATTAGGTCTTTTGGGGGAGTCCCACCAGAGCTTATGCTCAAAGTGACAATATCATACCATTGTAGAGAGCGGTTATTCTTAATATCCTTCCTAAACCCTCTCATATGTATACTCAACTCTTACGCAATGCATAATGGATTTGGGCAGGTGGTCTGCCATTGCAGCTCATTTACCGGGGAGAACAGATAACGACATAAAGAATCATTGGCACACGAACTTAAAGAAACTTTTGGATCAAAACCCGTCAAACACGGAGGTTGAAGAAGCAGCAGCTAGTTCATGCTCGGAATTAAGAATCCGAGAAGAAGAAGAAGGAGAAGAATTGGATGAAACCCTTTTTGTTTTGAATTCAGATATGGCAACCCCAGAATTGGCAGCCAAGCATGAAGGCATGAACTTTGGGGAAACTGAGACATGGGTTGTTGGTTTGAATGCTGAACACTCTATGGAACTGGGCGGCAACTTATGGACCGATCCTTTTGTTCTTGAAGACCCTTTAAGTTTGGATAATAACCCAACTCATGTACCAATGGATCTCTTACAACATTATGAAATGTTTCCTCCCACTCATTTTACTCAATGATGTCAATGGCTTAAATGTTTGTTGAAAGAATTCAAAGTAATGAAATGTCGTGATATGGATCTAATAGCTACGATGTAAACACAAATACAACAATCCTATCTTCTATTCTATGATCTTCATTATCCTATCTTCAATTCTATGGCCTTCATAGCGACGTTGTCATTCATACAGAGTGTCTTACCTTTGCCTAAAAGAAATAAGAATAACATGTAACTTGAGTTTTTCTTAAAGAAATATTCACTAAGTAAACTCATAATTGTAGTCAAAAAATGCAATCACGTGTAATTATGTTTAGATCTATTCTGATCTAATACATCATGACATGTCTTGATCTCTACGATGATCATATCCAACTTTGAGCAAAATTTAACGATCCGAAGATTTTCTGGAGTAAAAACGAGTTTGGGCTGAAAATTAGGTATAGTGGCAATTTTGTAATTTTTGTGAACCTCAGCGGCTTTTTGGTAATTTTCCCATTTTTTAAATATTTTATTCTGAAAAAATCCCAAATTTTTATGTCACTTTTCCCTTCTGGACCCTTGAGATTATTTCTTCCAAATTAATTAAAAAATCAAGAAGTTTGCTAAAAATTAGTAAAATGACCATTTTACCCTTTGTCTTCCCAAATCTTTTACAACTTCCTTAATTCCTTTTAAAATCTTACTAGGGCACCTTAAACTTACTCGTTAATATTTAAAAATTAGTTCAAATACAGAGTTTTTGAACTTCGGTACCACGTAAGTATTCCATTTGGTAAGCCCAACGAGCCCAACTCTTTGTGTCTGTACAAACACGTTGATTACAAAGTTGAAATCTACCACAATCAATATCAACAATAGCCTATATGATATCACTATCTATCAAACCTCGTTAGTCATTTTCATTTGAAACAATTCTCTAGTATTGTTAGCACATCTCCGCTAATTGAAACATTCCTTAACAAAGTATTCCTTATGCGTATATAAGTGCTAAGTAGCCTATTAATCTCTTTTCACGAGACTAAATTTTCACAATCAGAATACAAACATTGCTAAATCTAAAAATGTTATGAATCATCCATGCAACAAATAACATTCTAACATTCATATTTTATGTACATGATTACTCACTATAAATGTTAAAATACTTATTATTAAAATCATACTTACTTTTTTTTTTTAGAAAAATTATGAAAATATCGTTCCACTCTTCGTGTTGATGCTAAATCATGACACCGACCCATTCAATAATAGAATAGAGAAAATACGTGTGATGTAGGAAGGTAGAGTAGGGCGTTAGAGGTATGAAAGCTCGAAAAAGGTCCAACCAGGTCGTGGGAGACTATCAAAGAAGTGAAACTCCATGGAAAAGTTGAGACAAAGAAAGTCTTTTGTTACATTATTGTCACATTATTGCAGATTTTAAGAATGTGTGGTCTAGGATTTTTAGCTTTCATTTTCTATGTTAAAACCTTAGCAAATTTGTGTGCTTGTCGAATGGCAATGGGACGATGATGTTAGGAAATCCTGACAAGGTACAAACCAGTTTGGTTTGTATAACAAAAAACCACAACCAATTAATTATAGGACCCGCATCTGAGCTGTGTTGAAACAAACCAAGATTCATCATTCACACAATGAGCCCTATGTTCGTCAAGGCCGTTAAATTCTGGCCGCTATCGTTCTTGAAAGTAGATTTAGGTATGAAAACTTCTGTGGATATTATGATTTAAGTGGTCCTATTGTGTGTCCCGTGGTAGGAAACTATACTTGTTTTTTTATTACAAATTCAAGAATACGACCGATACGATTGATTGGTCTATGTGCCTCTCTTTTTACTTTTTTGTATCCCATGTTCATTGGATATAATTCGATCCTTCTATGGCCAAATCTCAATTTGTGGAAAGCCTTCGATGGCTTCTTGATAAAAATATCAATTTTTATTTGGGTATAGACAGTATCTCTTTAGTGAGATTCCTTGTAAGGGCGTTAAAATCTCTTCTTAGGAGACGCGTTTTAAAACTATGAGGCTAACAATGATATGTAACGGGTCAAAGTGGACAATATCTACTAGTGGTGGGTTTGAGTTGTTACAAATAGTATCAGAGCCAGACATTGGTTGGAGTAGGACTAGACCTTCTCCATAGTAAGCGCGTTTTAAAACCATAAGGTTGACGATAATACGTAACGGGCCAAAGCGGACAATATCTACTAGTGGTGGGCTTGGGCGGTTACAAATGGTTTCAGAGCCGGACATCAAGCAGTGTGCCAACGAGGACGCTAGCTCCCAAGCGGAGTGAATTGTGAGATCTCATATCAGTTGGAGAGTGGAACGGAACATTCTTTATAAGGGTGTTGAAACCTCTCCCTAATAGACGCGTTTTAAAACTGTGAGGCTGATGGCGACACGTAATAGGTCAAAGCAAACAATATCTACTAGCAATGGGCTTAAGTTGTTACATCTTTATTCTTCGTGATATTGACCACATTTCTAATTCCTACCATAAGTCAAGAAGCAGATCTTCTCCCACCCCACCCATTTAGAGACTATTAATCCGATAGTGAACGTATGCCGAAATTTATAAAGTAAAAGAAAATGGTTTTAAGAATTTAGTCAACAATAATTCAAGCTTGTTCAATCAAAAACAAATTTGGAAAAATTTAGGTACACTATGAACATAAAACTAAAATCAACAATCGTTGTTGTGTGGTTGAAGTTGGGAGGAAAATTATTGTCAAACTCCTGGGGCCTCAAATCTAGGACGGATCTTTTTTTTTGCATAGCTTTTTAAATTGTTAAATCATTATTTTAAACAACAAAAGTTCATTATTATTGTTGATTTTGAATGATTAGGAGGTTAAGAATCACATATCTCCACAACCGTACGATGTTGTCTACTTTAAGCATAAGATCTCGTGAACTCAAGTATAACCCATGTTGAATAAGTAAAGAACAAATTATATCTTCAAAAGAATCTGATACCATCGAAGGTGTTAGATGAACACGACTCTCTACAATTGTATAATATTGTTCACTCTGAGCATAAGATCTCATGAATTCAAGTGTAACCCAGGTTGAATAAGTAAAAAACAAATTATATTTTCAAAAAAATATGATACCATCAAAGGTGTTAGATGAACACGATTTCCACAATGGTATGATATTGTCTACCCTGAGCATAAAATCTCATAAATTCAAGTAAAACCCATGTTGAAAAAGTAAAGAACAAATTATATTTTCAAAAGAATCTGATACCATCGAAGTTGTTAGATGAACACGACTTTTCACAATGGTATGATATTGTCCACTTTGAGCATAAGATCTCGTGAATTCTAGTATAACCCATGTTGAATAAGTAAAGAACAAATTATATTTTCAAAAGAATCTGATACCATCGAAGGTGTTAGATGAACACGACTCTCCACAATGGTATGATATTGTCCACTTTAAACACAAGATCTCATGAATTCAAGTATAACCCATGTTGAATAAGTAAAAAAATAAATTATATTTTCAAAAGAATTTGAAACAATCGAAAGTGTTGGATAAACACAACTCTCCACAATGTTATGATATTGTCCACTTTGAGCATAAGCTTTCATGGGGTTGTTTTTGTGTACTCCAAAATGTCTCGTACCAATGGAATTAGTATTTCTTGATTATAAACTCACGATTAGTTCCCTAAAGCAGTGGAAGTGGAACTTTCATCGGGAATAATTTGAATTTGGATGAAAGCGATGGGGAAACGTGGAACACATACAGAAAGTGACAAGGGAAGGGTGAGGCCTACAATCATAGATGACTGTAGTTTTGTGATAATCCAACGCTCTTGACCTCTCGTTTGTTGCGTGTTTTTCGTTTTACGAAAGGTTTTCAGCCATTTTTTGGTTTGTTTTCACACTCATATTTCTTCCATCTTACCACAAACATTGACATCGCACAAATGACGACATGGGTCTTGTAAGCTTCTTGGCTCGGCTCATCCCCACCCCACGCGGATTGTGTCTGCTGTCGGATTTCTTGTGAAGTTGTTGATTTAAATTCAGTCCCCTATAGCACCACTCCAAGCTCGCTCGCTCACTCTCTTGGTGCCTCTGTTGGTGAAGAAAATGGTGCGAGCTCCTGTTGTTGATAAGGATGGAGTGAGGAGAGGTGCGTGGAGCTTTGAAGAAGATGAAAAGCTTAGAGCTTATGTTCACAGATATGGCCCTTCCAAATGGCGGGAGCTTCCCACGCTTGCAGGTACTCTAATCAATCTTTAGCTACTTGTAAACATGGGTTTTTCAAAAGGATTCTGATTTGGGTTTTGGCATTTGTAGGGCTCACCCGATGCGGTAAGAGTTGTAGATTGCGATGGTTGAATTATCTTCGTCCGGGTATTAAGCGAGGGAATTACACGGATGAAGAGAATGACTTAATCTGCAATCTCCATAAGAAACATGGCAATAGGTATCGAGATTAATTGCGTTTAGTGGGTGCTTCTGAAATGATACGATATTGTACACTTTGAGCATAAGTAGTCTCTTATGGCTTTTCTTTTGGTGTTTCGTACCGATAGAGGGAGATATTGTTCCTTACTTATAAACCCATGATCAACCCTTTAATCGAGGCTCGACACTTGAGTCACTTTTGACTAAACTCATCTCCCGACGATCCTCCTCTTGAACATCATAGAGTTTCCTCTGAAGCCCTCGAACAGCCTCTCCTAAGGCTCGACTTCTTTTCTAGAGTACTTGAGTAAAGTACATTCTTTGTTTGACACTAGAGTCACCTTTTGACTAGCCATCAGGGACTCCTCTCCCAACAATCCTCCCTAGAATAAAGTACATCATAGAGCTTCCTCTGAGGCCCATAGAGCACTCGAACAACCTCTCTTTAATCGAGGCTCGACTCTTTCTCTAGAGCTCTCGAACAAAGACTTGAGTCACTCTTGACTACACCTTTGAGGTTCACAACTACTTTCTGATTCTATGGTATGATATTGTCCACTTTGAGTATAAGCTCTTCTCGCTCTCATATCAATAGAGATAATGTACCTTACTTATAAACCCACGACCAACCCCTTAATTATTTAACGAGCGACTCGTCTCCCAACAAAGACTATTATATTATTATAAAAAATTAAGTGTTTTTTTTTTTCAATTTTCTAGATGGTCGACCATCGCTGCAAAACTACCAGGAAGAACAGACAACGAAATAAAGAACCATTGGAACGCGCACCTAAAGAAGCAAGTGAAGCCGAAACCACAATCATCAACTCAACCAAAACCAAAGCAATTAACATCCCAAGTGATTGAAGCAAAAAGAGAAGACTTTACGGGCTATTCCTCCACCACATTTGGGATTCTAGAGAGCTCATCTTTGTCCCAACAAACATCTTCATGCGATGACAATTTCGCCACCCAAAATTGGGGAGTGGAAGATTATGATCGAAGTGGGTACTACGAAGATTTCTGGACTACTGAACAATGCGTAAGTGATGTTCTTGATGGGTGCTTAGAATTCTCAGCAGACTACGAAATTGGTATCTTTTCACCACAACATCATGAACCCACCTACGACGATAATTACATAGATCTGTTCTGCTCCTTACTGTAA

mRNA sequence

ATGGAAGAAGAGGGTGATGAGAGAGAGAGAGAAGAGGGTGATGAGAGAGAGAGAGAAGATGGTGAAAATGGAAGAAGAAAGGGTAGATGGAGTAAGGAGGAAGATGAGAAACTTAGAGCTTATGTTACCAAATATGGCTCTTGGAATTGGCGCTTAATTCCCAAGTTTGCAGCTCATTTACCGGGGAGAACAGATAACGACATAAAGAATCATTGGCACACGAACTTAAAGAAACTTTTGGATCAAAACCCGTCAAACACGGAGGTTGAAGAAGCAGCAGCTAGTTCATGCTCGGAATTAAGAATCCGAGAAGAAGAAGAAGGAGAAGAATTGGATGAAACCCTTTTTGTTTTGAATTCAGATATGGCAACCCCAGAATTGGCAGCCAAGCATGAAGGCATGAACTTTGGGGAAACTGAGACATGGGTTGTTGGTTTGAATGCTGAACACTCTATGGAACTGGGCGGCAACTTATGGACCGATCCTTTTGTTCTTGAAGACCCTTTAAGTTTGGATAATAACCCAACTCATAAAAATTATGAAAATATCGTTCCACTCTTCGTGTTGATGCTAAATCATGACACCGACCCATTCAATAATAGAATAGAGAAAATACGTGTGATCAAATTTGTGTGCTTGTCGAATGGCAATGGGACGATGATGTTAGGAAATCCTGACAAGTCCCCTATAGCACCACTCCAAGCTCGCTCGCTCACTCTCTTGGTGCCTCTGTTGGTGAAGAAAATGGTGCGAGCTCCTGTTGTTGATAAGGATGGAGTGAGGAGAGGTGCGTGGAGCTTTGAAGAAGATGAAAAGCTTAGAGCTTATGTTCACAGATATGGCCCTTCCAAATGGCGGGAGCTTCCCACGCTTGCAGCTACTTGTAAACATGGGTTTTTCAAAAGGATTCTGATTTGGGTTTTGGCATTTGTAGGGCTCACCCGATGCGGTAAGAGTTGTAGATTGCGATGGTTGAATTATCTTCGTCCGGGAAGAACAGACAACGAAATAAAGAACCATTGGAACGCGCACCTAAAGAAGCAAGTGAAGCCGAAACCACAATCATCAACTCAACCAAAACCAAAGCAATTAACATCCCAAGTGATTGAAGCAAAAAGAGAAGACTTTACGGGCTATTCCTCCACCACATTTGGGATTCTAGAGAGCTCATCTTTGTCCCAACAAACATCTTCATGCGATGACAATTTCGCCACCCAAAATTGGGGAGTGGAAGATTATGATCGAAGTGGGTACTACGAAGATTTCTGGACTACTGAACAATGCGTAAGTGATGTTCTTGATGGGTGCTTAGAATTCTCAGCAGACTACGAAATTGGTATCTTTTCACCACAACATCATGAACCCACCTACGACGATAATTACATAGATCTGTTCTGCTCCTTACTGTAA

Coding sequence (CDS)

ATGGAAGAAGAGGGTGATGAGAGAGAGAGAGAAGAGGGTGATGAGAGAGAGAGAGAAGATGGTGAAAATGGAAGAAGAAAGGGTAGATGGAGTAAGGAGGAAGATGAGAAACTTAGAGCTTATGTTACCAAATATGGCTCTTGGAATTGGCGCTTAATTCCCAAGTTTGCAGCTCATTTACCGGGGAGAACAGATAACGACATAAAGAATCATTGGCACACGAACTTAAAGAAACTTTTGGATCAAAACCCGTCAAACACGGAGGTTGAAGAAGCAGCAGCTAGTTCATGCTCGGAATTAAGAATCCGAGAAGAAGAAGAAGGAGAAGAATTGGATGAAACCCTTTTTGTTTTGAATTCAGATATGGCAACCCCAGAATTGGCAGCCAAGCATGAAGGCATGAACTTTGGGGAAACTGAGACATGGGTTGTTGGTTTGAATGCTGAACACTCTATGGAACTGGGCGGCAACTTATGGACCGATCCTTTTGTTCTTGAAGACCCTTTAAGTTTGGATAATAACCCAACTCATAAAAATTATGAAAATATCGTTCCACTCTTCGTGTTGATGCTAAATCATGACACCGACCCATTCAATAATAGAATAGAGAAAATACGTGTGATCAAATTTGTGTGCTTGTCGAATGGCAATGGGACGATGATGTTAGGAAATCCTGACAAGTCCCCTATAGCACCACTCCAAGCTCGCTCGCTCACTCTCTTGGTGCCTCTGTTGGTGAAGAAAATGGTGCGAGCTCCTGTTGTTGATAAGGATGGAGTGAGGAGAGGTGCGTGGAGCTTTGAAGAAGATGAAAAGCTTAGAGCTTATGTTCACAGATATGGCCCTTCCAAATGGCGGGAGCTTCCCACGCTTGCAGCTACTTGTAAACATGGGTTTTTCAAAAGGATTCTGATTTGGGTTTTGGCATTTGTAGGGCTCACCCGATGCGGTAAGAGTTGTAGATTGCGATGGTTGAATTATCTTCGTCCGGGAAGAACAGACAACGAAATAAAGAACCATTGGAACGCGCACCTAAAGAAGCAAGTGAAGCCGAAACCACAATCATCAACTCAACCAAAACCAAAGCAATTAACATCCCAAGTGATTGAAGCAAAAAGAGAAGACTTTACGGGCTATTCCTCCACCACATTTGGGATTCTAGAGAGCTCATCTTTGTCCCAACAAACATCTTCATGCGATGACAATTTCGCCACCCAAAATTGGGGAGTGGAAGATTATGATCGAAGTGGGTACTACGAAGATTTCTGGACTACTGAACAATGCGTAAGTGATGTTCTTGATGGGTGCTTAGAATTCTCAGCAGACTACGAAATTGGTATCTTTTCACCACAACATCATGAACCCACCTACGACGATAATTACATAGATCTGTTCTGCTCCTTACTGTAA

Protein sequence

MEEEGDEREREEGDEREREDGENGRRKGRWSKEEDEKLRAYVTKYGSWNWRLIPKFAAHLPGRTDNDIKNHWHTNLKKLLDQNPSNTEVEEAAASSCSELRIREEEEGEELDETLFVLNSDMATPELAAKHEGMNFGETETWVVGLNAEHSMELGGNLWTDPFVLEDPLSLDNNPTHKNYENIVPLFVLMLNHDTDPFNNRIEKIRVIKFVCLSNGNGTMMLGNPDKSPIAPLQARSLTLLVPLLVKKMVRAPVVDKDGVRRGAWSFEEDEKLRAYVHRYGPSKWRELPTLAATCKHGFFKRILIWVLAFVGLTRCGKSCRLRWLNYLRPGRTDNEIKNHWNAHLKKQVKPKPQSSTQPKPKQLTSQVIEAKREDFTGYSSTTFGILESSSLSQQTSSCDDNFATQNWGVEDYDRSGYYEDFWTTEQCVSDVLDGCLEFSADYEIGIFSPQHHEPTYDDNYIDLFCSLL

Homology

[Close]

BLAST of CmoCh20G005930.1 vs. ExPASy Swiss-Prot
Match: Q6K1S6 (Transcription factor MYB30 OS=Oryza sativa subsp. japonica OX=39947 GN=MYB30 PE=1 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 9.0e-20
Identity = 84/267 (31.46%), Postives = 113/267 (42.32%), Query Frame = 0


Query: 249 MVRAPVVDKDGVRRGAWSFEEDEKLRAYVHRYGPSKWRELPTLAATCKHGFFKRILIWVL 308
           M RAP  +K G++RG W+ EED  L A++ R+G S WR LP  A                
Sbjct: 1   MGRAPCCEKMGLKRGPWTAEEDRILVAHIERHGHSNWRALPRQA---------------- 60

Query: 309 AFVGLTRCGKSCRLRWLNYLR----------------------------------PGRTD 368
              GL RCGKSCRLRW+NYLR                                  PGRTD
Sbjct: 61  ---GLLRCGKSCRLRWINYLRPDIKRGNFTREEEDAIIHLHDLLGNRWSAIAARLPGRTD 120

Query: 369 NEIKNHWNAHLKKQVKPKPQSSTQ---PKPKQLTSQVIEAKREDF---------TGYSST 428
           NEIKN W+ HLKK+++PKP S  +   PK K        A   D             S+T
Sbjct: 121 NEIKNVWHTHLKKRLEPKPSSGREAAAPKRKATKKAAAVAVAIDVPTTVPVSPEQSLSTT 180

Query: 429 TFGILESSSLSQQTSSCDDNFATQNWGVEDYDRSGYYEDFWT-TEQCVSDVLDGCLEFSA 466
           T     +   S   +S  D+  T ++  E+  +    + FW+ T     D  D  +E S 
Sbjct: 181 TTSAATTEEYSYSMASSADHNTTDSFTSEEEFQID--DSFWSETLAMTVDSTDSGMEMSG 240

[Close]

BLAST of CmoCh20G005930.1 vs. ExPASy Swiss-Prot
Match: O64399 (Transcription factor MYB34 OS=Arabidopsis thaliana OX=3702 GN=MYB34 PE=1 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 1.2e-19
Identity = 63/173 (36.42%), Postives = 81/173 (46.82%), Query Frame = 0


Query: 249 MVRAPVVDKDGVRRGAWSFEEDEKLRAYVHRYGPSKWRELPTLAATCKHGFFKRILIWVL 308
           MVR P   ++G+++GAW+ EED+KL AY+H +G   WR LP  A                
Sbjct: 1   MVRTPCCKEEGIKKGAWTPEEDQKLIAYLHLHGEGGWRTLPEKA---------------- 60

Query: 309 AFVGLTRCGKSCRLRWLNYLRP----------------------------------GRTD 368
              GL RCGKSCRLRW NYLRP                                  GRTD
Sbjct: 61  ---GLKRCGKSCRLRWANYLRPDIKRGEFSPEEDDTIIKLHALKGNKWAAIATSLAGRTD 120

Query: 369 NEIKNHWNAHLKKQVKPKPQSSTQPKPKQLTSQVIEAKREDFTGYSSTTFGIL 388
           NEIKN+WN +LKK++K K   +   KP   T Q     + +   YSS +  +L
Sbjct: 121 NEIKNYWNTNLKKRLKQKGIDAITHKPINSTGQTGFEPKVNKPVYSSGSARLL 154

[Close]

BLAST of CmoCh20G005930.1 vs. ExPASy Swiss-Prot
Match: Q9M0J5 (Transcription factor MYB41 OS=Arabidopsis thaliana OX=3702 GN=MYB41 PE=1 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 3.4e-19
Identity = 53/135 (39.26%), Postives = 65/135 (48.15%), Query Frame = 0


Query: 249 MVRAPVVDKDGVRRGAWSFEEDEKLRAYVHRYGPSKWRELPTLAATCKHGFFKRILIWVL 308
           M R+P  DK+GV++G W+ EED+KL  Y+  +GP  WR LP  A                
Sbjct: 1   MGRSPCCDKNGVKKGPWTAEEDQKLIDYIRFHGPGNWRTLPKNA---------------- 60

Query: 309 AFVGLTRCGKSCRLRWLNYLR----------------------------------PGRTD 350
              GL RCGKSCRLRW NYLR                                  PGRTD
Sbjct: 61  ---GLHRCGKSCRLRWTNYLRPDIKRGRFSFEEEETIIQLHSVMGNKWSAIAARLPGRTD 116

[Close]

BLAST of CmoCh20G005930.1 vs. ExPASy Swiss-Prot
Match: Q9SBF3 (Transcription factor MYB92 OS=Arabidopsis thaliana OX=3702 GN=MYB92 PE=1 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 7.6e-19
Identity = 54/135 (40.00%), Postives = 65/135 (48.15%), Query Frame = 0


Query: 249 MVRAPVVDKDGVRRGAWSFEEDEKLRAYVHRYGPSKWRELPTLAATCKHGFFKRILIWVL 308
           M R+P+ D  G+++G W+ +EDEKL  YV ++G S WR LP LA                
Sbjct: 1   MGRSPISDDSGLKKGPWTPDEDEKLVNYVQKHGHSSWRALPKLA---------------- 60

Query: 309 AFVGLTRCGKSCRLRWLNYLR----------------------------------PGRTD 350
              GL RCGKSCRLRW NYLR                                  PGRTD
Sbjct: 61  ---GLNRCGKSCRLRWTNYLRPDIKRGRFSPDEEQTILNLHSVLGNKWSTIANQLPGRTD 116

[Close]

BLAST of CmoCh20G005930.1 vs. ExPASy Swiss-Prot
Match: Q9C9C8 (Transcription factor MYB122 OS=Arabidopsis thaliana OX=3702 GN=MYB122 PE=1 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 1.3e-18
Identity = 54/133 (40.60%), Postives = 62/133 (46.62%), Query Frame = 0


Query: 249 MVRAPVVDKDGVRRGAWSFEEDEKLRAYVHRYGPSKWRELPTLAATCKHGFFKRILIWVL 308
           MVR P    +G+++GAW+ EED+KL AYV R+G   WR LP  A                
Sbjct: 1   MVRTPCCRAEGLKKGAWTQEEDQKLIAYVQRHGEGGWRTLPDKA---------------- 60

Query: 309 AFVGLTRCGKSCRLRWLNYLRPG----------------------------------RTD 348
              GL RCGKSCRLRW NYLRP                                   RTD
Sbjct: 61  ---GLKRCGKSCRLRWANYLRPDIKRGEFSQDEEDSIINLHAIHGNKWSAIARKIPRRTD 114

[Close]

BLAST of CmoCh20G005930.1 vs. ExPASy TrEMBL
Match: A0A6J1FW33 (transcription factor MYB30-like OS=Cucurbita moschata OX=3662 GN=LOC111449018 PE=4 SV=1)

HSP 1 Score: 397.9 bits (1021), Expect = 5.9e-107
Identity = 202/255 (79.22%), Postives = 202/255 (79.22%), Query Frame = 0


Query: 249 MVRAPVVDKDGVRRGAWSFEEDEKLRAYVHRYGPSKWRELPTLAATCKHGFFKRILIWVL 308
           MVRAPVVDKDGVRRGAWSFEEDEKLRAYVHRYGPSKWRELPTLA                
Sbjct: 1   MVRAPVVDKDGVRRGAWSFEEDEKLRAYVHRYGPSKWRELPTLA---------------- 60

Query: 309 AFVGLTRCGKSCRLRWLNYLR----------------------------------PGRTD 368
              GLTRCGKSCRLRWLNYLR                                  PGRTD
Sbjct: 61  ---GLTRCGKSCRLRWLNYLRPGIKRGNYTDEENDLICNLHKKHGNRWSTIAAKLPGRTD 120

Query: 369 NEIKNHWNAHLKKQVKPKPQSSTQPKPKQLTSQVIEAKREDFTGYSSTTFGILESSSLSQ 428
           NEIKNHWNAHLKKQVKPKPQSSTQPKPKQLTSQVIEAKREDFTGYSSTTFGILESSSLSQ
Sbjct: 121 NEIKNHWNAHLKKQVKPKPQSSTQPKPKQLTSQVIEAKREDFTGYSSTTFGILESSSLSQ 180

Query: 429 QTSSCDDNFATQNWGVEDYDRSGYYEDFWTTEQCVSDVLDGCLEFSADYEIGIFSPQHHE 470
           QTSSCDDNFATQNWGVEDYDRSGYYEDFWTTEQCVSDVLDGCLEFSADYEIGIFSPQHHE
Sbjct: 181 QTSSCDDNFATQNWGVEDYDRSGYYEDFWTTEQCVSDVLDGCLEFSADYEIGIFSPQHHE 236

[Close]

BLAST of CmoCh20G005930.1 vs. ExPASy TrEMBL
Match: A0A6J1JDW0 (transcription factor MYB8-like OS=Cucurbita maxima OX=3661 GN=LOC111484128 PE=4 SV=1)

HSP 1 Score: 351.7 bits (901), Expect = 4.8e-93
Identity = 188/255 (73.73%), Postives = 191/255 (74.90%), Query Frame = 0


Query: 249 MVRAPVVDKDGVRRGAWSFEEDEKLRAYVHRYGPSKWRELPTLAATCKHGFFKRILIWVL 308
           MVRAPVVDKDGVRRGAWSFEEDEKLRAYV RYGPSKWRELPTLA                
Sbjct: 1   MVRAPVVDKDGVRRGAWSFEEDEKLRAYVQRYGPSKWRELPTLA---------------- 60

Query: 309 AFVGLTRCGKSCRLRWLNYLR----------------------------------PGRTD 368
              GLTRCGKSCRLRWLNYLR                                  PGRTD
Sbjct: 61  ---GLTRCGKSCRLRWLNYLRPGIKRGNYTDEENDLICNLHKKHGNRWSTIDAKLPGRTD 120

Query: 369 NEIKNHWNAHLKKQVKPKPQSSTQPKPKQLTSQVIEAKREDFTGYSSTTFGILESSSLSQ 428
           NEIKNHWNAHLKKQ     QSSTQPKPKQLTSQVIEAKREDFTGYSSTTFGILESSSLSQ
Sbjct: 121 NEIKNHWNAHLKKQ-----QSSTQPKPKQLTSQVIEAKREDFTGYSSTTFGILESSSLSQ 180

Query: 429 QTSSCDDNFATQNWGVEDYDRSGYYEDFWTTEQCVSDVLDGCLEFSADYEIGIFSPQHHE 470
           QTSSCDDNFATQNWGVED+DRSGYYEDFW TE CVSDVLDGCLEFSADY IGIFSPQ H+
Sbjct: 181 QTSSCDDNFATQNWGVEDHDRSGYYEDFW-TEPCVSDVLDGCLEFSADYGIGIFSPQ-HD 229

[Close]

BLAST of CmoCh20G005930.1 vs. ExPASy TrEMBL
Match: A0A6J1JAG0 (transcription factor MYB13-like OS=Cucurbita maxima OX=3661 GN=LOC111484015 PE=4 SV=1)

HSP 1 Score: 292.0 bits (746), Expect = 4.5e-75
Identity = 154/216 (71.30%), Postives = 162/216 (75.00%), Query Frame = 0


Query: 11  EEGDEREREDGENGRRKGRWSKEEDEKLRAYVTKYGSWNWRLIPKF-------------- 70
           EEGDERERE+GENGR+KG+WSKEEDEKLRAYVTKYGSWNWRLIPKF              
Sbjct: 3   EEGDERERENGENGRKKGKWSKEEDEKLRAYVTKYGSWNWRLIPKFAGLSRCGKSCRLRW 62

Query: 71  -----------------------------------AAHLPGRTDNDIKNHWHTNLKKLLD 130
                                              A +LPGRTDN+IKNHWHTNLKKLLD
Sbjct: 63  MNYLRPDIKRGNFQKEEDQTILRLQATLGNRWSAIATYLPGRTDNEIKNHWHTNLKKLLD 122

Query: 131 QNPSNTEVEEAAASSCSELRIREEEEGEELDETLFVLNSDMATPELAAKHEGMNFGETET 178
           QNPSNTEVE+AAASSCSELRIREEE  EELDETL VLNS+MATPELAAKHEGMNFGETET
Sbjct: 123 QNPSNTEVEDAAASSCSELRIREEE--EELDETLIVLNSEMATPELAAKHEGMNFGETET 182

[Close]

BLAST of CmoCh20G005930.1 vs. ExPASy TrEMBL
Match: A0A6J1FTF2 (transcription factor MYB13-like OS=Cucurbita moschata OX=3662 GN=LOC111448622 PE=4 SV=1)

HSP 1 Score: 285.4 bits (729), Expect = 4.2e-73
Identity = 154/219 (70.32%), Postives = 159/219 (72.60%), Query Frame = 0


Query: 8   REREEGDEREREDGENGRRKGRWSKEEDEKLRAYVTKYGSWNWRLIPKF----------- 67
           ++  +G  + R+ G     KGRWSKEEDEKLRAYVTKYGSWNWRLIPKF           
Sbjct: 5   KQSNQGCIKRRKRGFVWPSKGRWSKEEDEKLRAYVTKYGSWNWRLIPKFAGLSRCGKSCR 64

Query: 68  --------------------------------------AAHLPGRTDNDIKNHWHTNLKK 127
                                                 AAHLPGRTDNDIKNHWHTNLKK
Sbjct: 65  LRWMNYLAPDIKRGNFQKEEDQTILRLQATLGNRWSAIAAHLPGRTDNDIKNHWHTNLKK 124

Query: 128 LLDQNPSNTEVEEAAASSCSELRIREEEEGEELDETLFVLNSDMATPELAAKHEGMNFGE 178
           LLDQNPSNTEVEEAAASSCSELRIREEEEGEELDETLFVLNSDMATPELAAKHEGMNFGE
Sbjct: 125 LLDQNPSNTEVEEAAASSCSELRIREEEEGEELDETLFVLNSDMATPELAAKHEGMNFGE 184

[Close]

BLAST of CmoCh20G005930.1 vs. ExPASy TrEMBL
Match: A0A6J1G843 (transcription factor MYB8-like OS=Cucurbita moschata OX=3662 GN=LOC111451634 PE=4 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 2.0e-62
Identity = 146/264 (55.30%), Postives = 165/264 (62.50%), Query Frame = 0


Query: 249 MVRAPVVDKDGVRRGAWSFEEDEKLRAYVHRYGPSKWRELPTLAATCKHGFFKRILIWVL 308
           MVRAP+VDKDGV+RGAWS EED+KL  YV ++GP KWR+LP+LA                
Sbjct: 1   MVRAPIVDKDGVKRGAWSSEEDDKLMGYVQKHGPRKWRQLPSLA---------------- 60

Query: 309 AFVGLTRCGKSCRLRWLNYLRP----------------------------------GRTD 368
              GL RCGKSCRLRWLNYLRP                                  GRTD
Sbjct: 61  ---GLARCGKSCRLRWLNYLRPGLKKGNYTDEENDLIYKLHEMHGNRWSMVATKLSGRTD 120

Query: 369 NEIKNHWNAHLKKQVKPKPQSSTQPKPKQLTSQV---IEAKREDFTGYSSTTFGILESSS 428
           NEIKNHWNAHLKKQ++ K +SSTQPKPK+L   +   +EAK E+FTGY ST FGI+ESSS
Sbjct: 121 NEIKNHWNAHLKKQIERKSESSTQPKPKKLRPNIASDLEAKTEEFTGYCSTKFGIVESSS 180

Query: 429 LSQQT--SSCDDNFATQNWGVEDYDRSGY----YEDFWTTEQCVSDVLDGCLEFSADYEI 470
           LS QT  SS D NF   NW VE+YDRSGY     E F      VS VLDG ++FSAD   
Sbjct: 181 LSVQTSSSSSDANFGRLNWAVEEYDRSGYGDLWNEPFMWDGDDVSYVLDGSMQFSADN-- 240

[Close]

BLAST of CmoCh20G005930.1 vs. NCBI nr
Match: KAG6570856.1 (Transcription factor MYB30, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 410.2 bits (1053), Expect = 2.4e-110
Identity = 211/267 (79.03%), Postives = 211/267 (79.03%), Query Frame = 0


Query: 237 SLTLLVPLLVKKMVRAPVVDKDGVRRGAWSFEEDEKLRAYVHRYGPSKWRELPTLAATCK 296
           SLTLLVPLLVKKMVRAPVVDKDGVRRGAWSFEEDEKLRAYV RYGPSKWRELPTLA    
Sbjct: 40  SLTLLVPLLVKKMVRAPVVDKDGVRRGAWSFEEDEKLRAYVQRYGPSKWRELPTLA---- 99

Query: 297 HGFFKRILIWVLAFVGLTRCGKSCRLRWLNYLR--------------------------- 356
                          GLTRCGKSCRLRWLNYLR                           
Sbjct: 100 ---------------GLTRCGKSCRLRWLNYLRPGIKRGNYTDEENDLICNLHKKHGNRW 159

Query: 357 -------PGRTDNEIKNHWNAHLKKQVKPKPQSSTQPKPKQLTSQVIEAKREDFTGYSST 416
                  PGRTDNEIKNHWNAHLKKQV PKPQSSTQPKPKQLTSQVIEAKREDFTGYSST
Sbjct: 160 STIAAKLPGRTDNEIKNHWNAHLKKQVNPKPQSSTQPKPKQLTSQVIEAKREDFTGYSST 219

Query: 417 TFGILESSSLSQQTSSCDDNFATQNWGVEDYDRSGYYEDFWTTEQCVSDVLDGCLEFSAD 470
           TFGILESSSLSQQTSSCDDNFATQNWGVEDYDRSGYYEDFWT EQCVSDVLDGCLEFSAD
Sbjct: 220 TFGILESSSLSQQTSSCDDNFATQNWGVEDYDRSGYYEDFWTIEQCVSDVLDGCLEFSAD 279

[Close]

BLAST of CmoCh20G005930.1 vs. NCBI nr
Match: XP_022944612.1 (transcription factor MYB30-like [Cucurbita moschata])

HSP 1 Score: 397.9 bits (1021), Expect = 1.2e-106
Identity = 202/255 (79.22%), Postives = 202/255 (79.22%), Query Frame = 0


Query: 249 MVRAPVVDKDGVRRGAWSFEEDEKLRAYVHRYGPSKWRELPTLAATCKHGFFKRILIWVL 308
           MVRAPVVDKDGVRRGAWSFEEDEKLRAYVHRYGPSKWRELPTLA                
Sbjct: 1   MVRAPVVDKDGVRRGAWSFEEDEKLRAYVHRYGPSKWRELPTLA---------------- 60

Query: 309 AFVGLTRCGKSCRLRWLNYLR----------------------------------PGRTD 368
              GLTRCGKSCRLRWLNYLR                                  PGRTD
Sbjct: 61  ---GLTRCGKSCRLRWLNYLRPGIKRGNYTDEENDLICNLHKKHGNRWSTIAAKLPGRTD 120

Query: 369 NEIKNHWNAHLKKQVKPKPQSSTQPKPKQLTSQVIEAKREDFTGYSSTTFGILESSSLSQ 428
           NEIKNHWNAHLKKQVKPKPQSSTQPKPKQLTSQVIEAKREDFTGYSSTTFGILESSSLSQ
Sbjct: 121 NEIKNHWNAHLKKQVKPKPQSSTQPKPKQLTSQVIEAKREDFTGYSSTTFGILESSSLSQ 180

Query: 429 QTSSCDDNFATQNWGVEDYDRSGYYEDFWTTEQCVSDVLDGCLEFSADYEIGIFSPQHHE 470
           QTSSCDDNFATQNWGVEDYDRSGYYEDFWTTEQCVSDVLDGCLEFSADYEIGIFSPQHHE
Sbjct: 181 QTSSCDDNFATQNWGVEDYDRSGYYEDFWTTEQCVSDVLDGCLEFSADYEIGIFSPQHHE 236

[Close]

BLAST of CmoCh20G005930.1 vs. NCBI nr
Match: KAG7010706.1 (Transcription factor MYB-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 394.4 bits (1012), Expect = 1.3e-105
Identity = 200/227 (88.11%), Postives = 200/227 (88.11%), Query Frame = 0


Query: 237 SLTLLVPLLVKKMVRAPVVDKDGVRRGAWSFEEDEKLRAYVHRYGPSKWRELPTLAATCK 296
           SLTLLVPLLVKKMVRAPVVDKDGVRRGAWSFEEDEKLRAYV RYGPSKWRELPTLA    
Sbjct: 40  SLTLLVPLLVKKMVRAPVVDKDGVRRGAWSFEEDEKLRAYVQRYGPSKWRELPTLA---- 99

Query: 297 HGFFKRILIWVLAFVGLTRCGKSCRLRWLNYLRPGRTDNEIKNHWNAHLKKQVKPKPQSS 356
                          GLTRCGKSCRLRWLNYLRP   DNEIKNHWNAHLKKQV PKPQSS
Sbjct: 100 ---------------GLTRCGKSCRLRWLNYLRP---DNEIKNHWNAHLKKQVNPKPQSS 159

Query: 357 TQPKPKQLTSQVIEAKREDFTGYSSTTFGILESSSLSQQTSSCDDNFATQNWGVEDYDRS 416
           TQPKPKQLTSQVIEAKREDFTGYSSTTFGILESSSLSQQTSSCDDNFATQNWGVEDYD S
Sbjct: 160 TQPKPKQLTSQVIEAKREDFTGYSSTTFGILESSSLSQQTSSCDDNFATQNWGVEDYDPS 219

Query: 417 GYYEDFWTTEQCVSDVLDGCLEFSADYEIGIFSPQHHEPTYDDNYID 464
           GYYED W TEQCVSDVLDGCLEFSADYEIGIFSPQHHEPTYDDNYID
Sbjct: 220 GYYEDIW-TEQCVSDVLDGCLEFSADYEIGIFSPQHHEPTYDDNYID 243

[Close]

BLAST of CmoCh20G005930.1 vs. NCBI nr
Match: XP_023512861.1 (transcription factor MYB30-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 387.1 bits (993), Expect = 2.1e-103
Identity = 199/255 (78.04%), Postives = 200/255 (78.43%), Query Frame = 0


Query: 249 MVRAPVVDKDGVRRGAWSFEEDEKLRAYVHRYGPSKWRELPTLAATCKHGFFKRILIWVL 308
           MVRAPVVDKDGVRRGAWSFEEDEKLRAYV RYGPSKWRELPTLA                
Sbjct: 1   MVRAPVVDKDGVRRGAWSFEEDEKLRAYVQRYGPSKWRELPTLA---------------- 60

Query: 309 AFVGLTRCGKSCRLRWLNYLR----------------------------------PGRTD 368
              GLTRCGKSCRLRWLNYLR                                  PGRTD
Sbjct: 61  ---GLTRCGKSCRLRWLNYLRPGIKRGNYTDEENDLICNLHKKHGNRWATIAAKLPGRTD 120

Query: 369 NEIKNHWNAHLKKQVKPKPQSSTQPKPKQLTSQVIEAKREDFTGYSSTTFGILESSSLSQ 428
           NEIKNHWNAHLKKQVKPKPQSSTQPKPKQLTSQVIEAKREDFTGYSSTTFGILESSSLSQ
Sbjct: 121 NEIKNHWNAHLKKQVKPKPQSSTQPKPKQLTSQVIEAKREDFTGYSSTTFGILESSSLSQ 180

Query: 429 QTSSCDDNFATQNWGVEDYDRSGYYEDFWTTEQCVSDVLDGCLEFSADYEIGIFSPQHHE 470
           QTSSCDDNFATQNWGVEDYDRSGYY+DFW TEQCVSDVLDGCLEFSADYEIGIFSPQHHE
Sbjct: 181 QTSSCDDNFATQNWGVEDYDRSGYYQDFW-TEQCVSDVLDGCLEFSADYEIGIFSPQHHE 235

[Close]

BLAST of CmoCh20G005930.1 vs. NCBI nr
Match: XP_022986370.1 (transcription factor MYB8-like [Cucurbita maxima])

HSP 1 Score: 351.7 bits (901), Expect = 1.0e-92
Identity = 188/255 (73.73%), Postives = 191/255 (74.90%), Query Frame = 0


Query: 249 MVRAPVVDKDGVRRGAWSFEEDEKLRAYVHRYGPSKWRELPTLAATCKHGFFKRILIWVL 308
           MVRAPVVDKDGVRRGAWSFEEDEKLRAYV RYGPSKWRELPTLA                
Sbjct: 1   MVRAPVVDKDGVRRGAWSFEEDEKLRAYVQRYGPSKWRELPTLA---------------- 60

Query: 309 AFVGLTRCGKSCRLRWLNYLR----------------------------------PGRTD 368
              GLTRCGKSCRLRWLNYLR                                  PGRTD
Sbjct: 61  ---GLTRCGKSCRLRWLNYLRPGIKRGNYTDEENDLICNLHKKHGNRWSTIDAKLPGRTD 120

Query: 369 NEIKNHWNAHLKKQVKPKPQSSTQPKPKQLTSQVIEAKREDFTGYSSTTFGILESSSLSQ 428
           NEIKNHWNAHLKKQ     QSSTQPKPKQLTSQVIEAKREDFTGYSSTTFGILESSSLSQ
Sbjct: 121 NEIKNHWNAHLKKQ-----QSSTQPKPKQLTSQVIEAKREDFTGYSSTTFGILESSSLSQ 180

Query: 429 QTSSCDDNFATQNWGVEDYDRSGYYEDFWTTEQCVSDVLDGCLEFSADYEIGIFSPQHHE 470
           QTSSCDDNFATQNWGVED+DRSGYYEDFW TE CVSDVLDGCLEFSADY IGIFSPQ H+
Sbjct: 181 QTSSCDDNFATQNWGVEDHDRSGYYEDFW-TEPCVSDVLDGCLEFSADYGIGIFSPQ-HD 229

[Close]

BLAST of CmoCh20G005930.1 vs. TAIR 10
Match: AT5G60890.1 (myb domain protein 34 )

HSP 1 Score: 99.4 bits (246), Expect = 8.3e-21
Identity = 63/173 (36.42%), Postives = 81/173 (46.82%), Query Frame = 0


Query: 249 MVRAPVVDKDGVRRGAWSFEEDEKLRAYVHRYGPSKWRELPTLAATCKHGFFKRILIWVL 308
           MVR P   ++G+++GAW+ EED+KL AY+H +G   WR LP  A                
Sbjct: 1   MVRTPCCKEEGIKKGAWTPEEDQKLIAYLHLHGEGGWRTLPEKA---------------- 60

Query: 309 AFVGLTRCGKSCRLRWLNYLRP----------------------------------GRTD 368
              GL RCGKSCRLRW NYLRP                                  GRTD
Sbjct: 61  ---GLKRCGKSCRLRWANYLRPDIKRGEFSPEEDDTIIKLHALKGNKWAAIATSLAGRTD 120

Query: 369 NEIKNHWNAHLKKQVKPKPQSSTQPKPKQLTSQVIEAKREDFTGYSSTTFGIL 388
           NEIKN+WN +LKK++K K   +   KP   T Q     + +   YSS +  +L
Sbjct: 121 NEIKNYWNTNLKKRLKQKGIDAITHKPINSTGQTGFEPKVNKPVYSSGSARLL 154

[Close]

BLAST of CmoCh20G005930.1 vs. TAIR 10
Match: AT4G28110.1 (myb domain protein 41 )

HSP 1 Score: 97.8 bits (242), Expect = 2.4e-20
Identity = 53/135 (39.26%), Postives = 65/135 (48.15%), Query Frame = 0


Query: 249 MVRAPVVDKDGVRRGAWSFEEDEKLRAYVHRYGPSKWRELPTLAATCKHGFFKRILIWVL 308
           M R+P  DK+GV++G W+ EED+KL  Y+  +GP  WR LP  A                
Sbjct: 1   MGRSPCCDKNGVKKGPWTAEEDQKLIDYIRFHGPGNWRTLPKNA---------------- 60

Query: 309 AFVGLTRCGKSCRLRWLNYLR----------------------------------PGRTD 350
              GL RCGKSCRLRW NYLR                                  PGRTD
Sbjct: 61  ---GLHRCGKSCRLRWTNYLRPDIKRGRFSFEEEETIIQLHSVMGNKWSAIAARLPGRTD 116

[Close]

BLAST of CmoCh20G005930.1 vs. TAIR 10
Match: AT5G10280.1 (myb domain protein 92 )

HSP 1 Score: 96.7 bits (239), Expect = 5.4e-20
Identity = 54/135 (40.00%), Postives = 65/135 (48.15%), Query Frame = 0


Query: 249 MVRAPVVDKDGVRRGAWSFEEDEKLRAYVHRYGPSKWRELPTLAATCKHGFFKRILIWVL 308
           M R+P+ D  G+++G W+ +EDEKL  YV ++G S WR LP LA                
Sbjct: 1   MGRSPISDDSGLKKGPWTPDEDEKLVNYVQKHGHSSWRALPKLA---------------- 60

Query: 309 AFVGLTRCGKSCRLRWLNYLR----------------------------------PGRTD 350
              GL RCGKSCRLRW NYLR                                  PGRTD
Sbjct: 61  ---GLNRCGKSCRLRWTNYLRPDIKRGRFSPDEEQTILNLHSVLGNKWSTIANQLPGRTD 116

[Close]

BLAST of CmoCh20G005930.1 vs. TAIR 10
Match: AT1G74080.1 (myb domain protein 122 )

HSP 1 Score: 95.9 bits (237), Expect = 9.2e-20
Identity = 54/133 (40.60%), Postives = 62/133 (46.62%), Query Frame = 0


Query: 249 MVRAPVVDKDGVRRGAWSFEEDEKLRAYVHRYGPSKWRELPTLAATCKHGFFKRILIWVL 308
           MVR P    +G+++GAW+ EED+KL AYV R+G   WR LP  A                
Sbjct: 1   MVRTPCCRAEGLKKGAWTQEEDQKLIAYVQRHGEGGWRTLPDKA---------------- 60

Query: 309 AFVGLTRCGKSCRLRWLNYLRPG----------------------------------RTD 348
              GL RCGKSCRLRW NYLRP                                   RTD
Sbjct: 61  ---GLKRCGKSCRLRWANYLRPDIKRGEFSQDEEDSIINLHAIHGNKWSAIARKIPRRTD 114

[Close]

BLAST of CmoCh20G005930.1 vs. TAIR 10
Match: AT1G56160.1 (myb domain protein 72 )

HSP 1 Score: 95.5 bits (236), Expect = 1.2e-19
Identity = 55/141 (39.01%), Postives = 66/141 (46.81%), Query Frame = 0


Query: 251 RAPVVDKDGVRRGAWSFEEDEKLRAYVHRYGPSKWRELPTLAATCKHGFFKRILIWVLAF 310
           RAP  DK+ V+RG WS +ED  L  ++ ++G   WR LP LA                  
Sbjct: 5   RAPCCDKNKVKRGPWSPQEDLTLITFIQKHGHQNWRSLPKLA------------------ 64

Query: 311 VGLTRCGKSCRLRWLNYLR----------------------------------PGRTDNE 358
            GL RCGKSCRLRW+NYLR                                  PGRTDNE
Sbjct: 65  -GLLRCGKSCRLRWINYLRPDVKRGNFSKKEEDAIIHYHQTLGNKWSKIASFLPGRTDNE 124

The following BLAST results are available for this feature:

BLAST of CmoCh20G005930.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6K1S6	9.0e-20	31.46	Transcription factor MYB30 OS=Oryza sativa subsp. japonica OX=39947 GN=MYB30 PE=...	[more]
O64399	1.2e-19	36.42	Transcription factor MYB34 OS=Arabidopsis thaliana OX=3702 GN=MYB34 PE=1 SV=1	[more]
Q9M0J5	3.4e-19	39.26	Transcription factor MYB41 OS=Arabidopsis thaliana OX=3702 GN=MYB41 PE=1 SV=1	[more]
Q9SBF3	7.6e-19	40.00	Transcription factor MYB92 OS=Arabidopsis thaliana OX=3702 GN=MYB92 PE=1 SV=1	[more]
Q9C9C8	1.3e-18	40.60	Transcription factor MYB122 OS=Arabidopsis thaliana OX=3702 GN=MYB122 PE=1 SV=1	[more]

BLAST of CmoCh20G005930.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FW33	5.9e-107	79.22	transcription factor MYB30-like OS=Cucurbita moschata OX=3662 GN=LOC111449018 PE...	[more]
A0A6J1JDW0	4.8e-93	73.73	transcription factor MYB8-like OS=Cucurbita maxima OX=3661 GN=LOC111484128 PE=4 ...	[more]
A0A6J1JAG0	4.5e-75	71.30	transcription factor MYB13-like OS=Cucurbita maxima OX=3661 GN=LOC111484015 PE=4...	[more]
A0A6J1FTF2	4.2e-73	70.32	transcription factor MYB13-like OS=Cucurbita moschata OX=3662 GN=LOC111448622 PE...	[more]
A0A6J1G843	2.0e-62	55.30	transcription factor MYB8-like OS=Cucurbita moschata OX=3662 GN=LOC111451634 PE=...	[more]

BLAST of CmoCh20G005930.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6570856.1	2.4e-110	79.03	Transcription factor MYB30, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022944612.1	1.2e-106	79.22	transcription factor MYB30-like [Cucurbita moschata]	[more]
KAG7010706.1	1.3e-105	88.11	Transcription factor MYB-like protein, partial [Cucurbita argyrosperma subsp. ar...	[more]
XP_023512861.1	2.1e-103	78.04	transcription factor MYB30-like [Cucurbita pepo subsp. pepo]	[more]
XP_022986370.1	1.0e-92	73.73	transcription factor MYB8-like [Cucurbita maxima]	[more]

BLAST of CmoCh20G005930.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G60890.1	8.3e-21	36.42	myb domain protein 34	[more]
AT4G28110.1	2.4e-20	39.26	myb domain protein 41	[more]
AT5G10280.1	5.4e-20	40.00	myb domain protein 92	[more]
AT1G74080.1	9.2e-20	40.60	myb domain protein 122	[more]
AT1G56160.1	1.2e-19	39.01	myb domain protein 72	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 26..78 e-value: 1.1E-12 score: 58.1 coord: 261..330 e-value: 3.1E-9 score: 46.7
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 257..328 score: 9.848723
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 22..76 score: 10.440955
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 29..76 e-value: 7.5725E-13 score: 60.667
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 264..328 e-value: 9.94206E-7 score: 43.333
IPR017930	Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 262..328 e-value: 9.2E-11 score: 41.8 coord: 27..75 e-value: 3.9E-13 score: 49.4
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 22..80 score: 23.136875
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 257..332 score: 16.490509
None	No IPR available	GENE3D	1.10.10.60		coord: 26..81 e-value: 7.4E-18 score: 66.4
None	No IPR available	GENE3D	1.10.10.60		coord: 331..374 e-value: 2.4E-7 score: 32.7
None	No IPR available	GENE3D	1.10.10.60		coord: 262..330 e-value: 3.1E-15 score: 57.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..32
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 11..32
None	No IPR available	PANTHER	PTHR10641:SF976	MYB-RELATED PROTEIN MYB4-LIKE ISOFORM X1	coord: 330..415 coord: 57..130 coord: 22..58
None	No IPR available	PANTHER	PTHR10641	MYB FAMILY TRANSCRIPTION FACTOR	coord: 330..415 coord: 57..130 coord: 22..58
None	No IPR available	PANTHER	PTHR10641	MYB FAMILY TRANSCRIPTION FACTOR	coord: 249..331
None	No IPR available	PANTHER	PTHR10641:SF976	MYB-RELATED PROTEIN MYB4-LIKE ISOFORM X1	coord: 249..331
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 24..81
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 260..341

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmoCh20G005930	CmoCh20G005930	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh20G005930.1:exon:2034	CmoCh20G005930.1:exon:2034	exon
CmoCh20G005930.1:exon:2033	CmoCh20G005930.1:exon:2033	exon
CmoCh20G005930.1:exon:2032	CmoCh20G005930.1:exon:2032	exon
CmoCh20G005930.1:exon:2031	CmoCh20G005930.1:exon:2031	exon
CmoCh20G005930.1:exon:2030	CmoCh20G005930.1:exon:2030	exon
CmoCh20G005930.1:exon:2029	CmoCh20G005930.1:exon:2029	exon
CmoCh20G005930.1:exon:2028	CmoCh20G005930.1:exon:2028	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh20G005930.1:cds	CmoCh20G005930.1:cds_7	CDS
CmoCh20G005930.1:cds	CmoCh20G005930.1:cds_6	CDS
CmoCh20G005930.1:cds	CmoCh20G005930.1:cds_5	CDS
CmoCh20G005930.1:cds	CmoCh20G005930.1:cds_4	CDS
CmoCh20G005930.1:cds	CmoCh20G005930.1:cds_3	CDS
CmoCh20G005930.1:cds	CmoCh20G005930.1:cds_2	CDS
CmoCh20G005930.1:cds	CmoCh20G005930.1:cds	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmoCh20G005930.1	CmoCh20G005930.1-protein	polypeptide