CmoCh18G013330.1 (mRNA) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGAAGCATTGTGGTGAAAAGCAAGTAAGAAAAGGAAGGAAGGAGAAGGTTTGAAAACCATTCAATTATTGGAGTAAAAAGGAGTTGGACAATGAAAGAAAAGAGATATCCATGAAAATAATAGAAAAAAACAGGGGAGGCGGAAAAGAGCATTAGGGGCGCGCACCTGGCTATTCTTCGGTGCCAATGCTTCGAAAAGCCACCACCTTCTCTCTCCTTCCCCATATATCTCCTCTCTGTTGTTTATCCCATTTTTGTTTCCTTGTAGCACCCTATTCTGCCCCGATTTTTCCATTTTCTACCCCGAGTAAGTATATTCATCCCATCTCCTGTTTTCCACCTCAATTTCTCAGATGGAATCATCGTTTTCATCTTCCCCCATCTACTTTTCCCCTCAACCCTCTTGATCTAGCCTCAAACCTTTCTATTTTCCCCAGAATTTCCCTTATTTTGTACATAATCTGTATCGATTTTGTCTGAGAGTGACTTGTTTATATCGTGTTTATTTGGATTGACGACCCCCCCCCCACAATCATTTTCTGAATGTTTTTGATGTTTTGATGCCTAAATAGCTCGTGTGAATCGAGGGTGGTGGATGAATAGAACGGATGTAATCATTTTTCCCCGACCCATTTCGTTTTTATTGAGTTTCATGGACTTAGTTTTTGGTAGGCGTTATTTGGGATTGATCATGCCGGAGGGTAATGTTTTATGGTCCATGGCGTGTGTGATTGGAGACCATTAGAGTCAGAGTCTTGTTTTTTTTTAAAAAAAAAAAAAAATTGTTTTTTCCCTTTTCCTCAGAGTTCGCTATCATTCTGATATCAAGAATCTGCAAGAGAACTCGAGATTTTGAATGTTTAATTCTTCACAATGCGAGGATTTAGTTTGCTGCATCTGTTCTTTGTTATTGGTTTTGAATGTTTGATTGATAATTGTAGTGATGTGATTGTGCAGTTGCTGGATTAGATGGTATGCAGCTACAATATCAGGAATGTGATTTCTTGGGCTGGACATGTAGGAATAATCAACCGAAGGGTTCAAATCAACAATATCTGGAGGAGCTTGCCTTCAAATCTTGGATTTGTTCACACCTGGAAGCGTGAATATAGAACGAGTCTCATGATGATGGTCGATACGGGTGCATCTGAAAATCGCAGGCCGATTGTTGATAAGCATCCAGAGAAAAATGAAGATGGTGGCTATGCCAGTGGAGGGTGGAAAAGGTCTGAATGGATTCATTTGAATGAACCTTACGTCTTTTTATTTAAAGTTATGTTGCTGAATTGTTATTCTGATCTTATGAAGATGTCTAGAAGACAATGCTTTGATCTGGTTATTGAAGTTTGCACCTAGCCTATCAAACAGCCTATTCCAATGAGATATGTGCTTAAATCTTTTATGTTTTTGTTTGATCTGCAGTGACGATGGGAAACTTAGTTGGGGGTATTCAAGTATCAGGGGGAAGAGGGCAACCATGGAAGATTTCTTCGATATTAAAATGTCGAAGGTTGATGGTCAAACGGTTTGCCTTTTTGGCATCTTTGATGGTTAGACTCTCCAACCATTGTTACAGTGGCATGATGTAGGTGTTAGATTTAGTAAATTTTAACCTTTCCGATTTCTTGGTGATATGTTGTTGGGATGTAGGTGTTAAGTTTCACTTAGTGATTGAAGATTAGAAAGTTCGAGATTTCAGATTCTTGCAAACTACTCCAAGTTTAGGCTTCATATATCCAAGACATATTTCGTAATCAATTTTGGCGCTTGAGTTGAATCAATACGAGAGATTAGTATTTTTATTGCATCATTGATGTTGAGCAATTAAATTATAGATGCTACCATAGATATCTGACAATATTATACATTGTACAAATAATTAGTCCTTTTAATGTGGTTTCAGGCCATGGTGGATCTCGTGCCGCAGAGTTTTTGAAAGACCATCTCTTCGAGAATCTGATGAAGCACCCAAAATTTTTGATGGATACCAAAGTAGCTATCAGTGTGTTTCATTTCCCTTATGCACCATTCATTTGTATATGAAGATATATTAATTAGGTTTATATGATGATTGTATTTTAGCTGCCCACAGGTGTAAGAACACGGGATCTTTAAGCTTCATGTTCTTTGTTTACGTTGCATTGTTTTCTACTGAAAAAAATATATATATGACATTAGATTCCTTGTTATTTTGTACTCGGCTTCAAAAGTTTCTTCTGTCACTTCCCAGGTGAAACATATCAACGGACCGATGCTGAATTTTTAAGTTTGGAAAAAGAAACTTCAAGGGACGATGGCTCCACTGCTTCAACAGCTTTGCTAGTTGGCAATCATCTCTATGTTGCCAATGTTGGCGATTCGCGTGCTATAATTTCAAAAGGGGGTGAAGGTATTATTTGCTTACTTTTTCTTGTTTTCTTACCCTTTTGTTTTAATGTAAGGTAGAAAATCTAGACTCTTGACCATGATAGTTTATAGTAAAAGCTAATGATAAAGATGATCAAAGTTGAACAAATCATAATGATTACAATATAACTACAACCTTTATTTCATATGCTTATTTTCATATGGGAACTTGAAACTTATCTTCATCCTGCTCGGCAGCAATCCCTCTTTCTGAGGACCACAAACCAAATAGAACTGACGAGCGGCGGAGAATTGAAAAGGCCGGGGGTGTTGTCATGTGGGCTGGTAAGATTTTCATAATGGTTTTGCTAAAAATGTTAAGAACTGATATCCCTGTTGGTTAACTTATGTATATAGGCAAAGTTCCACCATCTTATTTAAACTCCTTATGGAAAGCTAGAGTACCAAAGGCTAAAATATGTTTAAACAGAGGTCCTGTTCGTATTAACAACTATAGAAGTAAAATGATTTCAGGGAAGTAGGAATGCTTTCCTTGATAATTATCTATTGGTTGCCTGAGTATTATTACTGTTTACAGCAATTTAAATTTCTCAAGTCGTAGTTTCTTCTGACCATCTTCTAGAAAAAATGTAATGCCTTTAGCTACTGTATTTGAAGGTTATCTGCTATAATTCTTATTCATTTTCTGTTGTCAGGCACTTGGAGGGTAGGAGGTGTGTTAGCAATGTCCCGCGCTTTCGGTAACAAGATGTTGAAGCAGTTTGTTGTTGCAGATCCTGATATTCAGGTGTCGTTAGACTAATAATGGATATGTGGAAGAAGAAAGTCTTTGATGAATGAAATTTATGTTAATAGTTTATAACCTTTTAGAATCTTTGAAGGTTTTATGAGAATTTATTGTTTCAAATGCTCATCAGTGGGATTCTTTTCTAGTTTTATGTTTTGTTTGGTAAAGCTTGTCATGGTTTACTAAAACTGCCCACCATACTCACCAGGATCTTGAAGTAGACAAGGACGTCGAGTTGCTTATTCTCGCAAGCGATGGTCTTTGGGATGTGGTGCGCAACGAGGTATGCTCGCTTCATAATCCCACATATCCAAGATTCTCTAGATGGCGTGATCAGCACATATCAACATACATTTGCTATGCAGGATGCAGTACTAGTTGCAGGGAAGGAAGAAGAACCCGAGGCAGCTGCTCGGAAGCTAACCGAAGCAGCATTTACCCGTGGTAGCGCTGACAATATAACGTGCATTGTGGTGAAGTTTCATCATGATAATGCAGATCCTGCTGCCGACTAAGCATTTTGTATTGCTCAGTGTAGATTCTTTTTCTAGAGAGAGAAAAAAAGAAGAGAAAACTTGGATATGGCCTGCTAATTCTGCACCTGCAGCGAATGGGTGTGCAAAAAGGGCTAGCTTTGATTTGTTAATTCATTGGTATTATGTTATTTGTTTTTCCCAATCTTGTTTAACTGTTTATTCCTCATATTTGTTTGCTGTCTGTCTGTAAACTGAGGCAGAACAAATGAATCTAGTTTTAAACAACTCTTTCTTTTTCTCCTCTCA ATGAAGAAGCATTGTGGTGAAAAGCAAGTAAGAAAAGGAAGGAAGGAGAAGGCGTTATTTGGGATTGATCATGCCGGAGGCTACAATATCAGGAATGTGATTTCTTGGGCTGGACATGTAGGAATAATCAACCGAAGGGTTCAAATCAACAATATCTGGAGGAGCTTGCCTTCAAATCTTGGATTTGTTCACACCTGGAAGCGTGAATATAGAACGAGTCTCATGATGATGGTCGATACGGGTGCATCTGAAAATCGCAGGCCGATTGTTGATAAGCATCCAGAGAAAAATGAAGATGGTGGCTATGCCAGTGGAGGGTGGAAAAGTGACGATGGGAAACTTAGTTGGGGGTATTCAAGTATCAGGGGGAAGAGGGCAACCATGGAAGATTTCTTCGATATTAAAATGTCGAAGGTTGATGGTCAAACGGTTTGCCTTTTTGGCATCTTTGATGGCCATGGTGGATCTCGTGCCGCAGAGTTTTTGAAAGACCATCTCTTCGAGAATCTGATGAAGCACCCAAAATTTTTGATGGATACCAAAGTAGCTATCAGTGAAACATATCAACGGACCGATGCTGAATTTTTAAGTTTGGAAAAAGAAACTTCAAGGGACGATGGCTCCACTGCTTCAACAGCTTTGCTAGTTGGCAATCATCTCTATGTTGCCAATGTTGGCGATTCGCGTGCTATAATTTCAAAAGGGGGTGAAGCAATCCCTCTTTCTGAGGACCACAAACCAAATAGAACTGACGAGCGGCGGAGAATTGAAAAGGCCGGGGGTGTTGTCATGTGGGCTGGCACTTGGAGGGTAGGAGGTGTGTTAGCAATGTCCCGCGCTTTCGGTAACAAGATGTTGAAGCAGTTTGTTGTTGCAGATCCTGATATTCAGGTGTCCTTGTCATGGTTTACTAAAACTGCCCACCATACTCACCAGGATCTTGAAGTAGACAAGGACGTCGAGTTGCTTATTCTCGCAAGCGATGGTCTTTGGGATGTGGTGCGCAACGAGGATGCAGTACTAGTTGCAGGGAAGGAAGAAGAACCCGAGGCAGCTGCTCGGAAGCTAACCGAAGCAGCATTTACCCGTGGTAGCGCTGACAATATAACGTGCATTGTGGTGAAGTTTCATCATGATAATGCAGATCCTGCTGCCGACTAAGCATTTTGTATTGCTCAGTGTAGATTCTTTTTCTAGAGAGAGAAAAAAAGAAGAGAAAACTTGGATATGGCCTGCTAATTCTGCACCTGCAGCGAATGGGTGTGCAAAAAGGGCTAGCTTTGATTTGTTAATTCATTGGTATTATGTTATTTGTTTTTCCCAATCTTGTTTAACTGTTTATTCCTCATATTTGTTTGCTGTCTGTCTGTAAACTGAGGCAGAACAAATGAATCTAGTTTTAAACAACTCTTTCTTTTTCTCCTCTCA ATGAAGAAGCATTGTGGTGAAAAGCAAGTAAGAAAAGGAAGGAAGGAGAAGGCGTTATTTGGGATTGATCATGCCGGAGGCTACAATATCAGGAATGTGATTTCTTGGGCTGGACATGTAGGAATAATCAACCGAAGGGTTCAAATCAACAATATCTGGAGGAGCTTGCCTTCAAATCTTGGATTTGTTCACACCTGGAAGCGTGAATATAGAACGAGTCTCATGATGATGGTCGATACGGGTGCATCTGAAAATCGCAGGCCGATTGTTGATAAGCATCCAGAGAAAAATGAAGATGGTGGCTATGCCAGTGGAGGGTGGAAAAGTGACGATGGGAAACTTAGTTGGGGGTATTCAAGTATCAGGGGGAAGAGGGCAACCATGGAAGATTTCTTCGATATTAAAATGTCGAAGGTTGATGGTCAAACGGTTTGCCTTTTTGGCATCTTTGATGGCCATGGTGGATCTCGTGCCGCAGAGTTTTTGAAAGACCATCTCTTCGAGAATCTGATGAAGCACCCAAAATTTTTGATGGATACCAAAGTAGCTATCAGTGAAACATATCAACGGACCGATGCTGAATTTTTAAGTTTGGAAAAAGAAACTTCAAGGGACGATGGCTCCACTGCTTCAACAGCTTTGCTAGTTGGCAATCATCTCTATGTTGCCAATGTTGGCGATTCGCGTGCTATAATTTCAAAAGGGGGTGAAGCAATCCCTCTTTCTGAGGACCACAAACCAAATAGAACTGACGAGCGGCGGAGAATTGAAAAGGCCGGGGGTGTTGTCATGTGGGCTGGCACTTGGAGGGTAGGAGGTGTGTTAGCAATGTCCCGCGCTTTCGGTAACAAGATGTTGAAGCAGTTTGTTGTTGCAGATCCTGATATTCAGGTGTCCTTGTCATGGTTTACTAAAACTGCCCACCATACTCACCAGGATCTTGAAGTAGACAAGGACGTCGAGTTGCTTATTCTCGCAAGCGATGGTCTTTGGGATGTGGTGCGCAACGAGGATGCAGTACTAGTTGCAGGGAAGGAAGAAGAACCCGAGGCAGCTGCTCGGAAGCTAACCGAAGCAGCATTTACCCGTGGTAGCGCTGACAATATAACGTGCATTGTGGTGAAGTTTCATCATGATAATGCAGATCCTGCTGCCGACTAA MKKHCGEKQVRKGRKEKALFGIDHAGGYNIRNVISWAGHVGIINRRVQINNIWRSLPSNLGFVHTWKREYRTSLMMMVDTGASENRRPIVDKHPEKNEDGGYASGGWKSDDGKLSWGYSSIRGKRATMEDFFDIKMSKVDGQTVCLFGIFDGHGGSRAAEFLKDHLFENLMKHPKFLMDTKVAISETYQRTDAEFLSLEKETSRDDGSTASTALLVGNHLYVANVGDSRAIISKGGEAIPLSEDHKPNRTDERRRIEKAGGVVMWAGTWRVGGVLAMSRAFGNKMLKQFVVADPDIQVSLSWFTKTAHHTHQDLEVDKDVELLILASDGLWDVVRNEDAVLVAGKEEEPEAAARKLTEAAFTRGSADNITCIVVKFHHDNADPAAD Homology
BLAST of CmoCh18G013330.1 vs. ExPASy Swiss-Prot
Match: Q94AT1 (Probable protein phosphatase 2C 76 OS=Arabidopsis thaliana OX=3702 GN=At5g53140 PE=2 SV=1) HSP 1 Score: 456.1 bits (1172), Expect = 4.1e-127 Identity = 236/362 (65.19%), Postives = 280/362 (77.35%), Query Frame = 0
BLAST of CmoCh18G013330.1 vs. ExPASy Swiss-Prot
Match: Q6L5C4 (Probable protein phosphatase 2C 52 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0587100 PE=2 SV=1) HSP 1 Score: 420.2 bits (1079), Expect = 2.5e-116 Identity = 210/292 (71.92%), Postives = 243/292 (83.22%), Query Frame = 0
BLAST of CmoCh18G013330.1 vs. ExPASy Swiss-Prot
Match: Q6EN45 (Probable protein phosphatase 2C member 13, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=PP2C13 PE=2 SV=1) HSP 1 Score: 401.7 bits (1031), Expect = 9.1e-111 Identity = 204/331 (61.63%), Postives = 253/331 (76.44%), Query Frame = 0
BLAST of CmoCh18G013330.1 vs. ExPASy Swiss-Prot
Match: Q0JL75 (Probable protein phosphatase 2C 7 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0618200 PE=2 SV=2) HSP 1 Score: 377.9 bits (969), Expect = 1.4e-103 Identity = 188/287 (65.51%), Postives = 221/287 (77.00%), Query Frame = 0
BLAST of CmoCh18G013330.1 vs. ExPASy Swiss-Prot
Match: Q0DBU3 (Probable protein phosphatase 2C 56 OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0526800 PE=3 SV=2) HSP 1 Score: 335.1 bits (858), Expect = 1.0e-90 Identity = 167/283 (59.01%), Postives = 216/283 (76.33%), Query Frame = 0
BLAST of CmoCh18G013330.1 vs. ExPASy TrEMBL
Match: A0A6J1G2B8 (Protein-serine/threonine phosphatase OS=Cucurbita moschata OX=3662 GN=LOC111450023 PE=3 SV=1) HSP 1 Score: 684.9 bits (1766), Expect = 2.0e-193 Identity = 344/359 (95.82%), Postives = 344/359 (95.82%), Query Frame = 0
BLAST of CmoCh18G013330.1 vs. ExPASy TrEMBL
Match: A0A6J1HU07 (Protein-serine/threonine phosphatase OS=Cucurbita maxima OX=3661 GN=LOC111467783 PE=3 SV=1) HSP 1 Score: 677.9 bits (1748), Expect = 2.4e-191 Identity = 340/359 (94.71%), Postives = 342/359 (95.26%), Query Frame = 0
BLAST of CmoCh18G013330.1 vs. ExPASy TrEMBL
Match: A0A5D3D7P7 (Protein-serine/threonine phosphatase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1274G00390 PE=3 SV=1) HSP 1 Score: 647.5 bits (1669), Expect = 3.5e-182 Identity = 320/359 (89.14%), Postives = 335/359 (93.31%), Query Frame = 0
BLAST of CmoCh18G013330.1 vs. ExPASy TrEMBL
Match: A0A1S3AZ87 (Protein-serine/threonine phosphatase OS=Cucumis melo OX=3656 GN=LOC103484157 PE=3 SV=1) HSP 1 Score: 645.2 bits (1663), Expect = 1.7e-181 Identity = 319/359 (88.86%), Postives = 334/359 (93.04%), Query Frame = 0
BLAST of CmoCh18G013330.1 vs. ExPASy TrEMBL
Match: A0A5A7UA70 (Protein-serine/threonine phosphatase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold175G00190 PE=3 SV=1) HSP 1 Score: 645.2 bits (1663), Expect = 1.7e-181 Identity = 319/359 (88.86%), Postives = 334/359 (93.04%), Query Frame = 0
BLAST of CmoCh18G013330.1 vs. TAIR 10
Match: AT5G53140.1 (Protein phosphatase 2C family protein ) HSP 1 Score: 456.1 bits (1172), Expect = 2.9e-128 Identity = 236/362 (65.19%), Postives = 280/362 (77.35%), Query Frame = 0
BLAST of CmoCh18G013330.1 vs. TAIR 10
Match: AT4G31750.1 (HOPW1-1-interacting 2 ) HSP 1 Score: 329.7 bits (844), Expect = 3.1e-90 Identity = 164/293 (55.97%), Postives = 218/293 (74.40%), Query Frame = 0
BLAST of CmoCh18G013330.1 vs. TAIR 10
Match: AT5G24940.1 (Protein phosphatase 2C family protein ) HSP 1 Score: 326.6 bits (836), Expect = 2.6e-89 Identity = 162/274 (59.12%), Postives = 206/274 (75.18%), Query Frame = 0
BLAST of CmoCh18G013330.1 vs. TAIR 10
Match: AT5G10740.1 (Protein phosphatase 2C family protein ) HSP 1 Score: 325.9 bits (834), Expect = 4.5e-89 Identity = 162/274 (59.12%), Postives = 209/274 (76.28%), Query Frame = 0
BLAST of CmoCh18G013330.1 vs. TAIR 10
Match: AT1G43900.1 (Protein phosphatase 2C family protein ) HSP 1 Score: 297.0 bits (759), Expect = 2.2e-80 Identity = 142/264 (53.79%), Postives = 197/264 (74.62%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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