CmoCh18G010880.1 (mRNA) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh18G010880.1
TypemRNA
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
LocationCmo_Chr18: 11402900 .. 11405020 (-)
Sequence length207
RNA-Seq ExpressionCmoCh18G010880.1
SyntenyCmoCh18G010880.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAATAGAGCACGTCGGACAGCAAAGGTACATTTCTTAGAGCATGTAATTTAAACTTAATCATGAGCACATTCAAATTAAATAAAAAAGTAAGACAATCTTTGTTGTTTTATCAAGACACGATATGTTCATAATCATGCATAAATATTGAAAGTGACAATCCGATCAACTCCTTGGTTAAAGCTTATGGGTTACATAAACAATAGCAAAATTATTAATTAAGGGAAGTCCATAGGGACATCATCATTACCAAATGCCAACTATATATCAACTTAAGTCGAAGTTGCCTTCTTTTTTTTTTCTTTTTTTTTTTAATATTAAACTAATGTTTTGTCAAACAATTTGTTTTGTGCATTCCAATAATGTAAAATGCTCGCGCGTGTATGGAGCGTGCGACTTTTACTATTATGATCCCTAATCTTCTACCTTTTCCTATTTTCTAAAGTACCATCCTTAGGAGTATGTTGTATGATGCTATTTTTCGTTAATGAATACTATATTTTATGTGGGAAGAGAAATATTTGAGGTCCTACAAGTGGCTTTGTGAAAAAAATTTAACATTATTTCTGTGGGGCTGATCTTTCATTTATTAATTTTAAAAAGGCTTATGAATTTTTTTTTTTCCTGCAAGTATTGTATGAAACTAGACTACCCATTTTTTGTTTATTAAATATTTTAAATCCTAAAATTTAAAGGATTTTGTATTAGGTAGAGTTTTATTTGTATTTTATGATGTAATAATAATTGTTCAAGTATAATCTGACATAGATTCAGGGTCTTTTAGTACTGAAAAATATTGTGAAATCTAAATTAATGTTAATTTAGTATGTTTTGTAAAAATAATTATTGCATCATTGTTCATGCATTAATAAATTCACAACCTGGAAAATGAGATAATAGTGTGGCAATAAATTTGAGGGTTTAATATCTAGTATGGTGGGAGGGGGGGAGGGGGTAACGGCAGGGAGAATATAGAATGTGATCATGCATGGCATGTGAAGGAAGAGAGTGGGACCTACTTGGGTGCAATGGAATTTTAAAGAGTGGACCCATATGTTGAGCACCGTTGGATTGAATCGAGTATGATGGGAATAGATTTGAGACACGTGGCGGAAATCTAGTGAGGATGTCAACGTGTGGGACCATGTCTCGAAATGTAATGATTGTGTTGGAAAAAATACCTCCTTCTCCTTCCATTCACACCCTCCACTCCCAATTCTTTACATTTTCCCTTTTTTTTTCTTTAGTTTTTTATTTTAATAAAAATTTAATTTTTTTTAATTTTTTTTATATTTGTTCTGGTTTATTTTCTCAAGTTAACTATTTTTCAACTCGTGAGTTTTCAATAAATATGTGAATTCATTGGTTTTGATCTTTGCCCCTCCCCCCCAAAAGAATGTAAATATTTAATTTTAAATACAAAAATAGGAATTTTATTTAAATGGTAAAAATATAGTTTCTTCTTTTCCTAGTACAAGTCTTTCACTAGTACGTATTATTTTCTTTGTGATTTTCGTTCATTAAAGGCTTTCCTATACTAGGAAATATTGTTCTTTTTGAGATTTCTCTTTAGTAGCTTTCTTCCAAGGTTTTAAAAAATGTTTGATAGGAGAGAGTTTTTCACACTCTTATAAGAATACTTCGTTCCTCTGTAATCGATATGGGATCTTACAGTCTATCTCGTTAAGGTCAACATTTTTGCTAGCATATTTCCTAATGATTGAGTCATATACCATTTAAAACAAAAACATTTTCAATTTTTTCATCAATTTTTATGGTAAAATTTTGTAATTTTTATATTGATTGTGACACTTCAAACATACCCACTTCTGACATTGTTGTAATTAATCAACACTCAAAGAGGTAACGATAATAGAACCTTAAAAACATCTCTGATTTCATTAACAACTCCACTTTGCTTTTAATTTTTTCACGTGGAAGGTTATCCAACACGCAAGCTTTGATGGCGATGGAACAGCTCGGTGGCATCAAGAGCAGAGCGAGACTGGAGACACGCCCAGCCCGAATGATTGATGATTCTTTTGCCGTACGATTTGAAGACTTTGTTCCCACTAGATCTCGGGCGCAGGATGAAACACTGGACCCTGCAGCAGAGTAG

mRNA sequence

ATGGAAATAGAGCACGTCGGACAGCAAAGGTTATCCAACACGCAAGCTTTGATGGCGATGGAACAGCTCGGTGGCATCAAGAGCAGAGCGAGACTGGAGACACGCCCAGCCCGAATGATTGATGATTCTTTTGCCGTACGATTTGAAGACTTTGTTCCCACTAGATCTCGGGCGCAGGATGAAACACTGGACCCTGCAGCAGAGTAG

Coding sequence (CDS)

ATGGAAATAGAGCACGTCGGACAGCAAAGGTTATCCAACACGCAAGCTTTGATGGCGATGGAACAGCTCGGTGGCATCAAGAGCAGAGCGAGACTGGAGACACGCCCAGCCCGAATGATTGATGATTCTTTTGCCGTACGATTTGAAGACTTTGTTCCCACTAGATCTCGGGCGCAGGATGAAACACTGGACCCTGCAGCAGAGTAG

Protein sequence

MEIEHVGQQRLSNTQALMAMEQLGGIKSRARLETRPARMIDDSFAVRFEDFVPTRSRAQDETLDPAAE
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CmoCh18G010880CmoCh18G010880gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmoCh18G010880.1:exon:3807CmoCh18G010880.1:exon:3807exon
CmoCh18G010880.1:exon:3806CmoCh18G010880.1:exon:3806exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmoCh18G010880.1:cdsCmoCh18G010880.1:cds_2CDS
CmoCh18G010880.1:cdsCmoCh18G010880.1:cdsCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CmoCh18G010880.1CmoCh18G010880.1-proteinpolypeptide