CmoCh18G002710.1 (mRNA) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh18G002710.1
Type	mRNA
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Protein of unknown function, DUF584
Location	Cmo_Chr18: 1786038 .. 1786526 (-)
Sequence length	489
RNA-Seq Expression	CmoCh18G002710.1
Synteny	CmoCh18G002710.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGAATTGGAGCTCTGTTCTGAGAAAAAGCTATGGCGTCAGTGAAGATTTGGAAGAAGAAGATGTTTGGAGTTCTGTTGAGAGTAATGACGAATCGTCTAATTTCATCACTAGAAAAACCAATGATTACTCGACTTGGCGACTTCCATCTGCTCCAAAAATGATACCGAAATCCATTTCGACAAGGACCCACGAAACCCAGATGACGGATAATCGATCCTCTGCTCCGGTGGTCATTCCAGATTGGTCCAAAATTTACGGCAAGATGGACTTTTCCGCTGAAAAACCCGACGACGGAGACCAAGAAGACGTCGACGGTGAAGAAGATGACGACATGGTGCCTCCTCATGAATGGATTGCTCAGAAATTAGCCAGGAGCCGAATCTCGTCGTGCTCTGTTTTTGAAGGGGTTGGAAGAACTCTCAAAGGGAGAGATTTAAGCAAAGTTCGAAACGCCGTTCTGTCAAAGACTGGTTTTCTAGAGTGA

mRNA sequence

ATGGCGAATTGGAGCTCTGTTCTGAGAAAAAGCTATGGCGTCAGTGAAGATTTGGAAGAAGAAGATGTTTGGAGTTCTGTTGAGAGTAATGACGAATCGTCTAATTTCATCACTAGAAAAACCAATGATTACTCGACTTGGCGACTTCCATCTGCTCCAAAAATGATACCGAAATCCATTTCGACAAGGACCCACGAAACCCAGATGACGGATAATCGATCCTCTGCTCCGGTGGTCATTCCAGATTGGTCCAAAATTTACGGCAAGATGGACTTTTCCGCTGAAAAACCCGACGACGGAGACCAAGAAGACGTCGACGGTGAAGAAGATGACGACATGGTGCCTCCTCATGAATGGATTGCTCAGAAATTAGCCAGGAGCCGAATCTCGTCGTGCTCTGTTTTTGAAGGGGTTGGAAGAACTCTCAAAGGGAGAGATTTAAGCAAAGTTCGAAACGCCGTTCTGTCAAAGACTGGTTTTCTAGAGTGA

Coding sequence (CDS)

ATGGCGAATTGGAGCTCTGTTCTGAGAAAAAGCTATGGCGTCAGTGAAGATTTGGAAGAAGAAGATGTTTGGAGTTCTGTTGAGAGTAATGACGAATCGTCTAATTTCATCACTAGAAAAACCAATGATTACTCGACTTGGCGACTTCCATCTGCTCCAAAAATGATACCGAAATCCATTTCGACAAGGACCCACGAAACCCAGATGACGGATAATCGATCCTCTGCTCCGGTGGTCATTCCAGATTGGTCCAAAATTTACGGCAAGATGGACTTTTCCGCTGAAAAACCCGACGACGGAGACCAAGAAGACGTCGACGGTGAAGAAGATGACGACATGGTGCCTCCTCATGAATGGATTGCTCAGAAATTAGCCAGGAGCCGAATCTCGTCGTGCTCTGTTTTTGAAGGGGTTGGAAGAACTCTCAAAGGGAGAGATTTAAGCAAAGTTCGAAACGCCGTTCTGTCAAAGACTGGTTTTCTAGAGTGA

Protein sequence

MANWSSVLRKSYGVSEDLEEEDVWSSVESNDESSNFITRKTNDYSTWRLPSAPKMIPKSISTRTHETQMTDNRSSAPVVIPDWSKIYGKMDFSAEKPDDGDQEDVDGEEDDDMVPPHEWIAQKLARSRISSCSVFEGVGRTLKGRDLSKVRNAVLSKTGFLE

Homology

[Close]

BLAST of CmoCh18G002710.1 vs. ExPASy TrEMBL
Match: A0A6J1GRA6 (uncharacterized protein LOC111456797 OS=Cucurbita moschata OX=3662 GN=LOC111456797 PE=4 SV=1)

HSP 1 Score: 323.9 bits (829), Expect = 3.7e-85
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0


Query: 1   MANWSSVLRKSYGVSEDLEEEDVWSSVESNDESSNFITRKTNDYSTWRLPSAPKMIPKSI 60
           MANWSSVLRKSYGVSEDLEEEDVWSSVESNDESSNFITRKTNDYSTWRLPSAPKMIPKSI
Sbjct: 1   MANWSSVLRKSYGVSEDLEEEDVWSSVESNDESSNFITRKTNDYSTWRLPSAPKMIPKSI 60

Query: 61  STRTHETQMTDNRSSAPVVIPDWSKIYGKMDFSAEKPDDGDQEDVDGEEDDDMVPPHEWI 120
           STRTHETQMTDNRSSAPVVIPDWSKIYGKMDFSAEKPDDGDQEDVDGEEDDDMVPPHEWI
Sbjct: 61  STRTHETQMTDNRSSAPVVIPDWSKIYGKMDFSAEKPDDGDQEDVDGEEDDDMVPPHEWI 120

Query: 121 AQKLARSRISSCSVFEGVGRTLKGRDLSKVRNAVLSKTGFLE 163
           AQKLARSRISSCSVFEGVGRTLKGRDLSKVRNAVLSKTGFLE
Sbjct: 121 AQKLARSRISSCSVFEGVGRTLKGRDLSKVRNAVLSKTGFLE 162

[Close]

BLAST of CmoCh18G002710.1 vs. ExPASy TrEMBL
Match: A0A6J1JYG0 (uncharacterized protein LOC111490010 OS=Cucurbita maxima OX=3661 GN=LOC111490010 PE=4 SV=1)

HSP 1 Score: 318.5 bits (815), Expect = 1.6e-83
Identity = 159/162 (98.15%), Postives = 160/162 (98.77%), Query Frame = 0


Query: 1   MANWSSVLRKSYGVSEDLEEEDVWSSVESNDESSNFITRKTNDYSTWRLPSAPKMIPKSI 60
           MANWSSVLRKSYGVSEDLEEEDVWSSVESN+ESSNFITRK NDYSTWRLPSAPKMIPKSI
Sbjct: 1   MANWSSVLRKSYGVSEDLEEEDVWSSVESNEESSNFITRKPNDYSTWRLPSAPKMIPKSI 60

Query: 61  STRTHETQMTDNRSSAPVVIPDWSKIYGKMDFSAEKPDDGDQEDVDGEEDDDMVPPHEWI 120
           STRTHETQMTDNRSSAPVVIPDWSKIYGKMDFS EKPDDGDQEDVDGEEDDDMVPPHEWI
Sbjct: 61  STRTHETQMTDNRSSAPVVIPDWSKIYGKMDFSGEKPDDGDQEDVDGEEDDDMVPPHEWI 120

Query: 121 AQKLARSRISSCSVFEGVGRTLKGRDLSKVRNAVLSKTGFLE 163
           AQKLARSRISSCSVFEGVGRTLKGRDLSKVRNAVLSKTGFLE
Sbjct: 121 AQKLARSRISSCSVFEGVGRTLKGRDLSKVRNAVLSKTGFLE 162

[Close]

BLAST of CmoCh18G002710.1 vs. ExPASy TrEMBL
Match: A0A6J1E8Z7 (uncharacterized protein LOC111431737 OS=Cucurbita moschata OX=3662 GN=LOC111431737 PE=4 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 1.7e-61
Identity = 128/167 (76.65%), Postives = 142/167 (85.03%), Query Frame = 0


Query: 1   MANWSSVLRKSYGVSEDLEEEDVWSSVESNDESSNFITRKTNDYSTWRLPSAPKMIPKSI 60
           MANW+  LRKSYG SEDLEEEDVW SVE  ++SS+F+TRK+ DY   RLP+APKMIPKSI
Sbjct: 1   MANWNGALRKSYGFSEDLEEEDVWKSVEGKEDSSSFVTRKSTDY---RLPTAPKMIPKSI 60

Query: 61  STRTHETQMTDNRSSAPVVIPDWSKIYGKM-----DFSAEKPDDGDQEDVDGEEDDDMVP 120
           +TRTHETQM  NRSSAPV IPDW+KIYGKM     + S +KPDD DQED+ GEE DDMVP
Sbjct: 61  ATRTHETQMRTNRSSAPVDIPDWAKIYGKMGSSDGELSGQKPDDRDQEDIAGEE-DDMVP 120

Query: 121 PHEWIAQKLARSRISSCSVFEGVGRTLKGRDLSKVRNAVLSKTGFLE 163
           PHEWIAQKLARSRISS SV EGVGRTLKGRDLSKVRNA+L+KTGFLE
Sbjct: 121 PHEWIAQKLARSRISSFSVCEGVGRTLKGRDLSKVRNAILTKTGFLE 163

[Close]

BLAST of CmoCh18G002710.1 vs. ExPASy TrEMBL
Match: A0A5D3BLZ0 (Zinc-regulated protein 8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G005720 PE=4 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 4.9e-61
Identity = 132/177 (74.58%), Postives = 144/177 (81.36%), Query Frame = 0


Query: 1   MANWSSVLRKSYGVSEDLEEEDVWSSVESNDESSNFITRKTNDY-------------STW 60
           MANWSS LRK+YG S+DLEEEDVW+SVE  ++SSNFI RK++DY             STW
Sbjct: 1   MANWSSALRKNYGFSDDLEEEDVWNSVEGKEDSSNFINRKSHDYYYSSSSSSSSSSSSTW 60

Query: 61  RLPSAPKMIPKSISTRTHETQMTDNRSSAPVVIPDWSKIYGKMDFSA--EKPDDGDQEDV 120
           RLP+APKMIPKSISTRTHETQM +NRSSAPV IPDWSKIYGKM  S+  EK D  DQED 
Sbjct: 61  RLPTAPKMIPKSISTRTHETQMANNRSSAPVDIPDWSKIYGKMGSSSAGEKTDVRDQED- 120

Query: 121 DGEEDDDMVPPHEWIAQKLARSRISSCSVFEGVGRTLKGRDLSKVRNAVLSKTGFLE 163
              EDDDMVPPHEWIAQKLARSRISS SV EGVGRTLKGRDLSKVRNA+L+KTGFLE
Sbjct: 121 --GEDDDMVPPHEWIAQKLARSRISSFSVCEGVGRTLKGRDLSKVRNAILTKTGFLE 174

[Close]

BLAST of CmoCh18G002710.1 vs. ExPASy TrEMBL
Match: E5GC55 (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 4.9e-61
Identity = 132/177 (74.58%), Postives = 144/177 (81.36%), Query Frame = 0


Query: 1   MANWSSVLRKSYGVSEDLEEEDVWSSVESNDESSNFITRKTNDY-------------STW 60
           MANWSS LRK+YG S+DLEEEDVW+SVE  ++SSNFI RK++DY             STW
Sbjct: 1   MANWSSALRKNYGFSDDLEEEDVWNSVEGKEDSSNFINRKSHDYYYSSSSSSSSSSSSTW 60

Query: 61  RLPSAPKMIPKSISTRTHETQMTDNRSSAPVVIPDWSKIYGKMDFSA--EKPDDGDQEDV 120
           RLP+APKMIPKSISTRTHETQM +NRSSAPV IPDWSKIYGKM  S+  EK D  DQED 
Sbjct: 61  RLPTAPKMIPKSISTRTHETQMANNRSSAPVDIPDWSKIYGKMGSSSAGEKTDVRDQED- 120

Query: 121 DGEEDDDMVPPHEWIAQKLARSRISSCSVFEGVGRTLKGRDLSKVRNAVLSKTGFLE 163
              EDDDMVPPHEWIAQKLARSRISS SV EGVGRTLKGRDLSKVRNA+L+KTGFLE
Sbjct: 121 --GEDDDMVPPHEWIAQKLARSRISSFSVCEGVGRTLKGRDLSKVRNAILTKTGFLE 174

[Close]

BLAST of CmoCh18G002710.1 vs. NCBI nr
Match: XP_022954562.1 (uncharacterized protein LOC111456797 [Cucurbita moschata])

HSP 1 Score: 323.9 bits (829), Expect = 7.7e-85
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0


Query: 1   MANWSSVLRKSYGVSEDLEEEDVWSSVESNDESSNFITRKTNDYSTWRLPSAPKMIPKSI 60
           MANWSSVLRKSYGVSEDLEEEDVWSSVESNDESSNFITRKTNDYSTWRLPSAPKMIPKSI
Sbjct: 1   MANWSSVLRKSYGVSEDLEEEDVWSSVESNDESSNFITRKTNDYSTWRLPSAPKMIPKSI 60

Query: 61  STRTHETQMTDNRSSAPVVIPDWSKIYGKMDFSAEKPDDGDQEDVDGEEDDDMVPPHEWI 120
           STRTHETQMTDNRSSAPVVIPDWSKIYGKMDFSAEKPDDGDQEDVDGEEDDDMVPPHEWI
Sbjct: 61  STRTHETQMTDNRSSAPVVIPDWSKIYGKMDFSAEKPDDGDQEDVDGEEDDDMVPPHEWI 120

Query: 121 AQKLARSRISSCSVFEGVGRTLKGRDLSKVRNAVLSKTGFLE 163
           AQKLARSRISSCSVFEGVGRTLKGRDLSKVRNAVLSKTGFLE
Sbjct: 121 AQKLARSRISSCSVFEGVGRTLKGRDLSKVRNAVLSKTGFLE 162

[Close]

BLAST of CmoCh18G002710.1 vs. NCBI nr
Match: XP_023542791.1 (uncharacterized protein LOC111802596 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 320.9 bits (821), Expect = 6.5e-84
Identity = 160/162 (98.77%), Postives = 161/162 (99.38%), Query Frame = 0


Query: 1   MANWSSVLRKSYGVSEDLEEEDVWSSVESNDESSNFITRKTNDYSTWRLPSAPKMIPKSI 60
           MANWSSVLRKSYGVSEDLEEEDVWSSVESN+ESSNFITRKTNDYSTWRLPSAPKMIPKSI
Sbjct: 1   MANWSSVLRKSYGVSEDLEEEDVWSSVESNEESSNFITRKTNDYSTWRLPSAPKMIPKSI 60

Query: 61  STRTHETQMTDNRSSAPVVIPDWSKIYGKMDFSAEKPDDGDQEDVDGEEDDDMVPPHEWI 120
           STRTHETQMTDNRSSAPVVIPDWSKIYGKMDFS EKPDDGDQEDVDGEEDDDMVPPHEWI
Sbjct: 61  STRTHETQMTDNRSSAPVVIPDWSKIYGKMDFSGEKPDDGDQEDVDGEEDDDMVPPHEWI 120

Query: 121 AQKLARSRISSCSVFEGVGRTLKGRDLSKVRNAVLSKTGFLE 163
           AQKLARSRISSCSVFEGVGRTLKGRDLSKVRNAVLSKTGFLE
Sbjct: 121 AQKLARSRISSCSVFEGVGRTLKGRDLSKVRNAVLSKTGFLE 162

[Close]

BLAST of CmoCh18G002710.1 vs. NCBI nr
Match: XP_022994201.1 (uncharacterized protein LOC111490010 [Cucurbita maxima])

HSP 1 Score: 318.5 bits (815), Expect = 3.2e-83
Identity = 159/162 (98.15%), Postives = 160/162 (98.77%), Query Frame = 0


Query: 1   MANWSSVLRKSYGVSEDLEEEDVWSSVESNDESSNFITRKTNDYSTWRLPSAPKMIPKSI 60
           MANWSSVLRKSYGVSEDLEEEDVWSSVESN+ESSNFITRK NDYSTWRLPSAPKMIPKSI
Sbjct: 1   MANWSSVLRKSYGVSEDLEEEDVWSSVESNEESSNFITRKPNDYSTWRLPSAPKMIPKSI 60

Query: 61  STRTHETQMTDNRSSAPVVIPDWSKIYGKMDFSAEKPDDGDQEDVDGEEDDDMVPPHEWI 120
           STRTHETQMTDNRSSAPVVIPDWSKIYGKMDFS EKPDDGDQEDVDGEEDDDMVPPHEWI
Sbjct: 61  STRTHETQMTDNRSSAPVVIPDWSKIYGKMDFSGEKPDDGDQEDVDGEEDDDMVPPHEWI 120

Query: 121 AQKLARSRISSCSVFEGVGRTLKGRDLSKVRNAVLSKTGFLE 163
           AQKLARSRISSCSVFEGVGRTLKGRDLSKVRNAVLSKTGFLE
Sbjct: 121 AQKLARSRISSCSVFEGVGRTLKGRDLSKVRNAVLSKTGFLE 162

[Close]

BLAST of CmoCh18G002710.1 vs. NCBI nr
Match: KAG7012366.1 (hypothetical protein SDJN02_25118, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 314.3 bits (804), Expect = 6.1e-82
Identity = 156/162 (96.30%), Postives = 160/162 (98.77%), Query Frame = 0


Query: 1   MANWSSVLRKSYGVSEDLEEEDVWSSVESNDESSNFITRKTNDYSTWRLPSAPKMIPKSI 60
           MANWSSVLRKSYGVSEDLEEEDVWSSVESN+ESSNFITRK NDYSTWRLPSAPKMIPKSI
Sbjct: 1   MANWSSVLRKSYGVSEDLEEEDVWSSVESNEESSNFITRKPNDYSTWRLPSAPKMIPKSI 60

Query: 61  STRTHETQMTDNRSSAPVVIPDWSKIYGKMDFSAEKPDDGDQEDVDGEEDDDMVPPHEWI 120
           STRTHETQMTDNRSSAPVVIPDWSKIYGKMDFS EKPD+GDQEDVDGE+DDDMVPPHEWI
Sbjct: 61  STRTHETQMTDNRSSAPVVIPDWSKIYGKMDFSGEKPDEGDQEDVDGEDDDDMVPPHEWI 120

Query: 121 AQKLARSRISSCSVFEGVGRTLKGRDLSKVRNAVLSKTGFLE 163
           A+KLARSRISSCSVFEGVGRTLKGRDLSKVRNAVLSKTGFLE
Sbjct: 121 AKKLARSRISSCSVFEGVGRTLKGRDLSKVRNAVLSKTGFLE 162

[Close]

BLAST of CmoCh18G002710.1 vs. NCBI nr
Match: KAG6573187.1 (hypothetical protein SDJN03_27074, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 312.4 bits (799), Expect = 2.3e-81
Identity = 155/162 (95.68%), Postives = 159/162 (98.15%), Query Frame = 0


Query: 1   MANWSSVLRKSYGVSEDLEEEDVWSSVESNDESSNFITRKTNDYSTWRLPSAPKMIPKSI 60
           MANWSSVLRKSYGVSEDLEEEDVWSSVESN+ESSNFITRK NDYSTWRLPSAPKMIPKSI
Sbjct: 1   MANWSSVLRKSYGVSEDLEEEDVWSSVESNEESSNFITRKPNDYSTWRLPSAPKMIPKSI 60

Query: 61  STRTHETQMTDNRSSAPVVIPDWSKIYGKMDFSAEKPDDGDQEDVDGEEDDDMVPPHEWI 120
           STRTHETQMTDNRSSAPVVIPDWSKIYGKMDFS E PD+GDQEDVDGE+DDDMVPPHEWI
Sbjct: 61  STRTHETQMTDNRSSAPVVIPDWSKIYGKMDFSGENPDEGDQEDVDGEDDDDMVPPHEWI 120

Query: 121 AQKLARSRISSCSVFEGVGRTLKGRDLSKVRNAVLSKTGFLE 163
           A+KLARSRISSCSVFEGVGRTLKGRDLSKVRNAVLSKTGFLE
Sbjct: 121 AKKLARSRISSCSVFEGVGRTLKGRDLSKVRNAVLSKTGFLE 162

[Close]

BLAST of CmoCh18G002710.1 vs. TAIR 10
Match: AT4G04630.1 (Protein of unknown function, DUF584 )

HSP 1 Score: 118.2 bits (295), Expect = 6.0e-27
Identity = 73/149 (48.99%), Postives = 95/149 (63.76%), Query Frame = 0


Query: 16  EDLEEEDVWSSVESNDESSNFITRKTNDYSTWRLPSAPKMIPKSISTRTHETQMTDNRSS 75
           E+ +EEDVWS +   + SS  +    + +S+    S+    P +I  R  +      +SS
Sbjct: 25  EEFQEEDVWSVLREGETSSPEMKIPKSHFSS---SSSSSSSPWNI--RRSKEVSGVKQSS 84

Query: 76  APVVIPDWSKIYGKMDFSAEKPDDGDQEDVDGEEDDD--MVPPHEWIAQKLARSRISSCS 135
           AP+ +PDWSK+YG    +            D +EDDD  MVPPHEW+A+KLAR++ISS S
Sbjct: 85  APMNVPDWSKVYGDSKSNRRSSHLHSHAADDDDEDDDGCMVPPHEWVARKLARTQISSFS 144

Query: 136 VFEGVGRTLKGRDLSKVRNAVLSKTGFLE 163
           + EGVGRTLKGRDLSKVRNAVLSKTGFLE
Sbjct: 145 MCEGVGRTLKGRDLSKVRNAVLSKTGFLE 168

[Close]

BLAST of CmoCh18G002710.1 vs. TAIR 10
Match: AT4G21970.1 (Protein of unknown function, DUF584 )

HSP 1 Score: 108.6 bits (270), Expect = 4.7e-24
Identity = 66/149 (44.30%), Postives = 95/149 (63.76%), Query Frame = 0


Query: 16  EDLEEEDVWSSV-ESNDESSNFITRKTNDYSTWRLPSAPKMIPKSISTRTHETQMTDNRS 75
           E+ +EE+VWS + ES  +       K+N+  +    S+ + IPK      +E      +S
Sbjct: 5   EEFQEEEVWSVLRESETQGPEMKMSKSNNLFSASSSSSARYIPKG-----NEVSGGAKQS 64

Query: 76  SAPVVIPDWSKIYGKMDFSAEKPDDG-DQEDVDGEEDDDMVPPHEWIAQKLARSRISSCS 135
           SAP+ IPDWSK+YG   +S +          +D +++  MVPPHE +A++LAR++ISS S
Sbjct: 65  SAPMNIPDWSKVYG---YSKKNTSSHLHSWAIDDDDEGSMVPPHELVAKRLARTQISSFS 124

Query: 136 VFEGVGRTLKGRDLSKVRNAVLSKTGFLE 163
           + EG+GRTLKGRDLSK RNAVL++TGFLE
Sbjct: 125 MCEGIGRTLKGRDLSKTRNAVLTRTGFLE 145

[Close]

BLAST of CmoCh18G002710.1 vs. TAIR 10
Match: AT1G61930.1 (Protein of unknown function, DUF584 )

HSP 1 Score: 86.3 bits (212), Expect = 2.5e-17
Identity = 70/179 (39.11%), Postives = 97/179 (54.19%), Query Frame = 0


Query: 14  VSEDLE--EEDVWSSVESNDESSNFITRKTNDYSTWRL---------------------- 73
           V+++LE  EED+WS    +D++    T     Y TW L                      
Sbjct: 30  VTDELELGEEDIWSPAVIHDDT----TENEESYGTWNLRATLGKNGRVGGLSLAFEGSLV 89

Query: 74  --PSAPKMIPKSISTRTHETQMTDNR--SSAPVVIPDWSKIYGKMDFSAEKPDDGDQEDV 133
             PS+  MI + I     E +    +  SSAPV +PDWSKIY ++D S E   + D ED 
Sbjct: 90  APPSSSPMIVQKIHGGGGEGEEDRRKLASSAPVNVPDWSKIY-RVD-SVESIHELDDED- 149

Query: 134 DGEEDDDMVPPHEWIAQKLA-RSRI---SSCSVFEGVGRTLKGRDLSKVRNAVLSKTGF 161
           D +E+  M+PPHE++A+  A RSR       SVF+GVGRTLKGR+L +VR+A+ S+TGF
Sbjct: 150 DEDEESGMMPPHEYLAKSQARRSRKIGGGGASVFDGVGRTLKGRELRRVRDAIWSQTGF 201

[Close]

BLAST of CmoCh18G002710.1 vs. TAIR 10
Match: AT5G60680.1 (Protein of unknown function, DUF584 )

HSP 1 Score: 82.8 bits (203), Expect = 2.8e-16
Identity = 56/132 (42.42%), Postives = 71/132 (53.79%), Query Frame = 0


Query: 31  DESSNFITRKTNDYSTWRLPSAPKMIPKSISTRTHETQMTDNRSSAPVVIPDWSKIY--G 90
           DES  F    ++     R  S+     K  S R          SS PV +PDWSKI    
Sbjct: 34  DESDLFNPIHSDSPDFCRKISSSVRSGKKSSNRPSAASSAAAASSLPVNVPDWSKILRGE 93

Query: 91  KMDFSAEKPDDGDQEDVDGEEDDDMVPPHEWIAQKLARSRISSCSVFEGVGRTLKGRDLS 150
             D      +D D +D D E+  D +PPHE+    LA++R++S SV EGVGRTLKGRDLS
Sbjct: 94  YRDNRRRSIEDNDDDDDDNEDGGDWLPPHEF----LAKTRMASFSVHEGVGRTLKGRDLS 153

Query: 151 KVRNAVLSKTGF 161
           +VRNA+  K GF
Sbjct: 154 RVRNAIFEKFGF 161

[Close]

BLAST of CmoCh18G002710.1 vs. TAIR 10
Match: AT3G45210.1 (Protein of unknown function, DUF584 )

HSP 1 Score: 81.6 bits (200), Expect = 6.2e-16
Identity = 61/154 (39.61%), Postives = 85/154 (55.19%), Query Frame = 0


Query: 10  KSYGVSEDLEEEDVWSSVESNDESSNFITRKTNDYSTWRLPSAPKMIPKSISTRTHETQM 69
           ++Y V+ D E E   S + SN   S    RK        + S  K  P +++T       
Sbjct: 22  RTYNVTGDSEFEFDESDLYSNRSDSPEFRRKL-------ITSNRKSSPATVTT------- 81

Query: 70  TDNRSSAPVVIPDWSKIYGKMD-FSAEKPDDGDQEDVDGEEDDDMVPPHEWIAQKLARSR 129
           T   SS P+ + +WSKI GK +  S E  DDG          +  +PPHE+    LA++R
Sbjct: 82  TTVASSLPMNVQNWSKILGKENRKSIENDDDG---------GEGKLPPHEY----LAKTR 141

Query: 130 ISSCSVFEGVGRTLKGRDLSKVRNAVLSKTGFLE 163
           ++S SV EG+GRTLKGRD+S+VRNA+L KTGFL+
Sbjct: 142 MASFSVHEGIGRTLKGRDMSRVRNAILEKTGFLD 148

The following BLAST results are available for this feature:

BLAST of CmoCh18G002710.1 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh18G002710.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GRA6	3.7e-85	100.00	uncharacterized protein LOC111456797 OS=Cucurbita moschata OX=3662 GN=LOC1114567...	[more]
A0A6J1JYG0	1.6e-83	98.15	uncharacterized protein LOC111490010 OS=Cucurbita maxima OX=3661 GN=LOC111490010...	[more]
A0A6J1E8Z7	1.7e-61	76.65	uncharacterized protein LOC111431737 OS=Cucurbita moschata OX=3662 GN=LOC1114317...	[more]
A0A5D3BLZ0	4.9e-61	74.58	Zinc-regulated protein 8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
E5GC55	4.9e-61	74.58	Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]

BLAST of CmoCh18G002710.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022954562.1	7.7e-85	100.00	uncharacterized protein LOC111456797 [Cucurbita moschata]	[more]
XP_023542791.1	6.5e-84	98.77	uncharacterized protein LOC111802596 [Cucurbita pepo subsp. pepo]	[more]
XP_022994201.1	3.2e-83	98.15	uncharacterized protein LOC111490010 [Cucurbita maxima]	[more]
KAG7012366.1	6.1e-82	96.30	hypothetical protein SDJN02_25118, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6573187.1	2.3e-81	95.68	hypothetical protein SDJN03_27074, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of CmoCh18G002710.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G04630.1	6.0e-27	48.99	Protein of unknown function, DUF584	[more]
AT4G21970.1	4.7e-24	44.30	Protein of unknown function, DUF584	[more]
AT1G61930.1	2.5e-17	39.11	Protein of unknown function, DUF584	[more]
AT5G60680.1	2.8e-16	42.42	Protein of unknown function, DUF584	[more]
AT3G45210.1	6.2e-16	39.61	Protein of unknown function, DUF584	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 161..162
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 97..113
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 91..114
None	No IPR available	PANTHER	PTHR33083:SF55	OS07G0512250 PROTEIN	coord: 15..162
None	No IPR available	PANTHER	PTHR33083	EXPRESSED PROTEIN	coord: 15..162
IPR007608	Senescence regulator S40	PFAM	PF04520	Senescence_reg	coord: 16..162 e-value: 2.7E-41 score: 142.2

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmoCh18G002710	CmoCh18G002710	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh18G002710.1:exon:1627	CmoCh18G002710.1:exon:1627	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh18G002710.1:cds	CmoCh18G002710.1:cds	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmoCh18G002710.1	CmoCh18G002710.1-protein	polypeptide