CmoCh17G013890.1 (mRNA) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh17G013890.1
TypemRNA
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
Descriptionprotein IQ-DOMAIN 14-like
LocationCmo_Chr17: 10751339 .. 10752310 (-)
Sequence length666
RNA-Seq ExpressionCmoCh17G013890.1
SyntenyCmoCh17G013890.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AGATACACGTATGGGGTGGCATCGCTCTCCTCCACTGTCTCCTCACCAAAAATTGGAGTCCCACTTACTTCGAATACCTTCCAGGACCCAGTAAGTTCTGATGGTTGGGTTCGCTTTCGTTGAGAAAATGGCTTCAAATCAAACTCTAGATCACTGTTTGCAATGAAGTATTCTGATCTCGTTATCCAGGCATGGGTATAACAATATAAAAATAAAGCTCCATCCCAAACCCCTAAACCCCCAAACCCCGAAACCCCTAAACCCCTAAACCCAAAACCCAAAACCCTAAAACCCTATAATATGTACTGTAGTTGTGGAAGGCCAGTCCAAATTGAGCTGAAGCAGTTACGACAGACATTAGGGCTGCAGGGTTGTCATGGTGGTGGAATTGGTTAGAGAGTCAATTACCTCCATCAAATGTTCCGTCGTCTGAACCTCAAACTCTCAATAATTTCCTTTTTGCACTTCAAACTCCACAACAAAACCCAACCCCAAGTATTAACAACAAACAACATCTACACAATATGGATCAAACAACTCTCACACCGAAGTCTACAAAATCAACCATCCCAAACCTCCCCGGCCGCGTTCCGAACCCTGCCTGCAAACTCGAGATCGTATTCAAGGCCGAGAAGCATTATTCATGGAACTGATTCTTCACCATTTGCTGTGGGACTTAGAGATGATGAAAGCCTCACGAGCTGCCCTCCTTTCTCAGTCCCACACTACATGGCTCCCACAGTTTCAGCCAAAGCCAAGCTAATAGGCTGCACCACCCCTACCTCTATGACCACTCAGTCCAAAACAAGGATTTCATTCCCTTTCAAGTGGAGCAAACCCAATTTGTTCTCAAATTCAAACAATAATTCATCATCAAATAATAACTCTCAAAGGGCTTTGGACAACAACCAATCGTTGCAATCTGTAGGCAATTTGAGTGTGGATTCTACTGTGTCCTTGCCTGCTGGGTAG

mRNA sequence

AGATACACGTATGGGGTGGCATCGCTCTCCTCCACTGTCTCCTCACCAAAAATTGGAGTCCCACTTACTTCGAATACCTTCCAGGACCCAAGAGTCAATTACCTCCATCAAATGTTCCGTCGTCTGAACCTCAAACTCTCAATAATTTCCTTTTTGCACTTCAAACTCCACAACAAAACCCAACCCCAAGTATTAACAACAAACAACATCTACACAATATGGATCAAACAACTCTCACACCGAAGTCTACAAAATCAACCATCCCAAACCTCCCCGGCCGCGTTCCGAACCCTGCCTGCAAACTCGAGATCGTATTCAAGGCCGAGAAGCATTATTCATGGAACTGATTCTTCACCATTTGCTGTGGGACTTAGAGATGATGAAAGCCTCACGAGCTGCCCTCCTTTCTCAGTCCCACACTACATGGCTCCCACAGTTTCAGCCAAAGCCAAGCTAATAGGCTGCACCACCCCTACCTCTATGACCACTCAGTCCAAAACAAGGATTTCATTCCCTTTCAAGTGGAGCAAACCCAATTTGTTCTCAAATTCAAACAATAATTCATCATCAAATAATAACTCTCAAAGGGCTTTGGACAACAACCAATCGTTGCAATCTGTAGGCAATTTGAGTGTGGATTCTACTGTGTCCTTGCCTGCTGGGTAG

Coding sequence (CDS)

AGATACACGTATGGGGTGGCATCGCTCTCCTCCACTGTCTCCTCACCAAAAATTGGAGTCCCACTTACTTCGAATACCTTCCAGGACCCAAGAGTCAATTACCTCCATCAAATGTTCCGTCGTCTGAACCTCAAACTCTCAATAATTTCCTTTTTGCACTTCAAACTCCACAACAAAACCCAACCCCAAGTATTAACAACAAACAACATCTACACAATATGGATCAAACAACTCTCACACCGAAGTCTACAAAATCAACCATCCCAAACCTCCCCGGCCGCGTTCCGAACCCTGCCTGCAAACTCGAGATCGTATTCAAGGCCGAGAAGCATTATTCATGGAACTGATTCTTCACCATTTGCTGTGGGACTTAGAGATGATGAAAGCCTCACGAGCTGCCCTCCTTTCTCAGTCCCACACTACATGGCTCCCACAGTTTCAGCCAAAGCCAAGCTAATAGGCTGCACCACCCCTACCTCTATGACCACTCAGTCCAAAACAAGGATTTCATTCCCTTTCAAGTGGAGCAAACCCAATTTGTTCTCAAATTCAAACAATAATTCATCATCAAATAATAACTCTCAAAGGGCTTTGGACAACAACCAATCGTTGCAATCTGTAGGCAATTTGAGTGTGGATTCTACTGTGTCCTTGCCTGCTGGGTAG

Protein sequence

RYTYGVASLSSTVSSPKIGVPLTSNTFQDPRVNYLHQMFRRLNLKLSIISFLHFKLHNKTQPQVLTTNNIYTIWIKQLSHRSLQNQPSQTSPAAFRTLPANSRSYSRPRSIIHGTDSSPFAVGLRDDESLTSCPPFSVPHYMAPTVSAKAKLIGCTTPTSMTTQSKTRISFPFKWSKPNLFSNSNNNSSSNNNSQRALDNNQSLQSVGNLSVDSTVSLPAG
Homology
BLAST of CmoCh17G013890.1 vs. ExPASy Swiss-Prot
Match: Q9M199 (Protein IQ-DOMAIN 13 OS=Arabidopsis thaliana OX=3702 GN=IQD13 PE=1 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 2.3e-18
Identity = 63/118 (53.39%), Postives = 81/118 (68.64%), Query Frame = 0

Query: 115 TDSSPFAVGLRDDESLTSCPPFSVPHYMAPTVSAKAKLIGCTTP------TSMTTQSKTR 174
           T  SPF    +DD+SLTSCPPFS P YMAPTVSAKAKL   + P      T ++T  K R
Sbjct: 393 TQDSPF----KDDDSLTSCPPFSAPSYMAPTVSAKAKLRANSNPKERMDRTPVSTNEKRR 452

Query: 175 ISFP---FKWSKPNLF-SNSNNNSSSNNNSQRA--LDNNQSLQSVGNLSVDSTVSLPA 221
            SFP   FKW+K +LF SN++NN    ++S  A  L+ +++L+SVGNLS+DSTVS+PA
Sbjct: 453 SSFPLGSFKWNKGSLFMSNNSNNKGPGSSSSGAVVLEKHKTLKSVGNLSIDSTVSMPA 506

BLAST of CmoCh17G013890.1 vs. ExPASy Swiss-Prot
Match: Q8LPG9 (Protein IQ-DOMAIN 14 OS=Arabidopsis thaliana OX=3702 GN=IQD14 PE=1 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 6.8e-10
Identity = 60/150 (40.00%), Postives = 84/150 (56.00%), Query Frame = 0

Query: 79  SHRSLQNQPSQTSPAAFRTLPANSRSYSRPRSIIHGTDSSPFAVGLRDDESLTSCPPFSV 138
           S RS  + PS       R +   +  YSR R  + G D SPF    +DD+SLTSCPPF  
Sbjct: 522 SSRSTFHTPS-------RPIHTGTSRYSRGR--LRGQD-SPF----KDDDSLTSCPPF-- 581

Query: 139 PHYMAPTVSAKAKLIGCTTPTSMT----TQSKTRISFP-----FKWSKPNL-FSNSNNNS 198
           P YMAPTVSAKAK+   + P           K R+S+P     F+W+K +L  SNS+++ 
Sbjct: 582 PSYMAPTVSAKAKVRPNSNPKERVMGTPVSEKRRMSYPPTQDTFRWNKGSLVMSNSSSHR 641

Query: 199 SSNNNSQRALDNNQSLQSVGNLSVDSTVSL 219
              +     L+ +++L+SVGNLS+ ST S+
Sbjct: 642 GPGSPGGVVLEKHKTLKSVGNLSIGSTASM 655

BLAST of CmoCh17G013890.1 vs. ExPASy TrEMBL
Match: A0A1S3CB25 (protein IQ-DOMAIN 14-like OS=Cucumis melo OX=3656 GN=LOC103498953 PE=4 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 1.2e-33
Identity = 102/151 (67.55%), Postives = 113/151 (74.83%), Query Frame = 0

Query: 86  QPSQTSPAAFRT-LPANSRSYSRPRSIIHGTDSSP-FAVGLRDDESLTSCPPFSVPHYMA 145
           +PS+ SP  FRT  P  SRS+SR R I H   SSP F VG++DDESLTSCPPFSVPHYMA
Sbjct: 380 KPSRLSPNMFRTPPPGTSRSFSRARGIDH---SSPFFDVGIKDDESLTSCPPFSVPHYMA 439

Query: 146 PTVSAKAKLIGCTTPTSMT-TQSKTRISFPFKW-SKPN-LFSN--SNNNSSSNNNSQRAL 205
           PTVSAKAKL GC+TPT +T  QSKTRISFPFKW +KPN LFSN  SN +SS N NSQR L
Sbjct: 440 PTVSAKAKLRGCSTPTPITNNQSKTRISFPFKWNNKPNLLFSNNSSNKDSSPNINSQRGL 499

Query: 206 D--------NNQSLQSVGNLSVDSTVSLPAG 222
           D        NN + QSVGNLSVDS+ SLPAG
Sbjct: 500 DYNNNNNNNNNHNNQSVGNLSVDSSTSLPAG 527

BLAST of CmoCh17G013890.1 vs. ExPASy TrEMBL
Match: A0A6J1KVB4 (protein IQ-DOMAIN 14-like OS=Cucurbita maxima OX=3661 GN=LOC111497546 PE=4 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 1.6e-33
Identity = 86/144 (59.72%), Postives = 106/144 (73.61%), Query Frame = 0

Query: 80  HRSLQNQPSQTSPAAFRTLP-ANSRSYSRPRSIIHGTD-SSPFAVGLRDDESLTSCPPFS 139
           H  +  +P++ SP AFRT P  +SR YSR +  ++G D  SP+ V L+DDESLTSCPPF+
Sbjct: 326 HHPILPKPTRNSPVAFRTPPGGSSRWYSRQKGSMNGADCCSPYDVALKDDESLTSCPPFT 385

Query: 140 VPHYMAPTVSAKAKLIGCTTPTSMTTQSKTRISFPFKWSKPNLFSNSNNNSSSNNNSQRA 199
           VP YM PTVSAKAKL GC TP  + T SKTR+SFPFKW+KPNLF+NS  + S + N+Q  
Sbjct: 386 VPRYMTPTVSAKAKLRGCATPPPLDTHSKTRLSFPFKWNKPNLFTNSKKD-SGDKNAQMG 445

Query: 200 LDNNQSLQSVGNLSVDSTVSLPAG 222
           L+  QSLQS  NLS+DST SLPAG
Sbjct: 446 LNKIQSLQSFSNLSLDSTASLPAG 468

BLAST of CmoCh17G013890.1 vs. ExPASy TrEMBL
Match: A0A6J1H7V4 (protein IQ-DOMAIN 14-like OS=Cucurbita moschata OX=3662 GN=LOC111461242 PE=4 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 3.8e-32
Identity = 86/145 (59.31%), Postives = 108/145 (74.48%), Query Frame = 0

Query: 80  HRSLQNQPSQTSPAAFRTLP-ANSRSYSRPRSIIHGTD-SSPFAVGLRDDESLTSCPPFS 139
           H  +  +P++ SPAAFRT P  +SR YSRP+  ++G +  SP+ V L+DDESLTSCPPF+
Sbjct: 321 HHQILPKPTRNSPAAFRTPPGGSSRWYSRPKGSMNGAECCSPYDVALKDDESLTSCPPFT 380

Query: 140 VPHYMAPTVSAKAKLIGCTTPTSMTT-QSKTRISFPFKWSKPNLFSNSNNNSSSNNNSQR 199
           VP YM PTVSAKAKL GC TP  + T  SKTR+SF FKW+KPNLFSNS  + S + N+Q 
Sbjct: 381 VPRYMTPTVSAKAKLRGCATPPPIDTHSSKTRLSFGFKWNKPNLFSNSKKD-SGDKNAQM 440

Query: 200 ALDNNQSLQSVGNLSVDSTVSLPAG 222
            L+  QSLQS+ NLS++ST SLPAG
Sbjct: 441 GLNKIQSLQSLSNLSLESTASLPAG 464

BLAST of CmoCh17G013890.1 vs. ExPASy TrEMBL
Match: A0A0A0K994 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G087690 PE=4 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 1.5e-31
Identity = 93/153 (60.78%), Postives = 108/153 (70.59%), Query Frame = 0

Query: 86  QPSQTSPAAFRT-LPANSRSYSRPRSIIHGTDSSPFAVGLRDDESLTSCPPFSVPHYMAP 145
           +PS+ SP  FRT  P  SRS+SR R     +    F +G++DDESLTSCPPFSVPHYMAP
Sbjct: 383 KPSRPSPNMFRTPPPGTSRSFSRARGSTDHSSPLFFDMGIKDDESLTSCPPFSVPHYMAP 442

Query: 146 TVSAKAKLIGCTTPTSMTT-------QSKTRISFPFKW--SKPNLFSN--SNNNSSSNNN 205
           TVSAKAKL  C+TPT +TT       QSKTRISFPF+W   KPNLFSN  SN N S N N
Sbjct: 443 TVSAKAKLRECSTPTPITTTTNNNNSQSKTRISFPFRWKNDKPNLFSNKSSNKNLSPNIN 502

Query: 206 SQRALD-----NNQSLQSVGNLSVDSTVSLPAG 222
           SQR LD     N+ + QS+GNLSVDS++SLPAG
Sbjct: 503 SQRGLDYNNNNNHNNNQSMGNLSVDSSISLPAG 535

BLAST of CmoCh17G013890.1 vs. ExPASy TrEMBL
Match: A0A6J1DMF7 (protein IQ-DOMAIN 14-like OS=Momordica charantia OX=3673 GN=LOC111022581 PE=4 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 1.9e-31
Identity = 95/152 (62.50%), Postives = 110/152 (72.37%), Query Frame = 0

Query: 84  QNQPS-QTSPAAFRTLPANSRSYSRPRSIIHGTDSSPFAVGLRDDESLTSCPPFSVPHYM 143
           +N P+ +T P AFRT PA+SR YSRPR   +G D SPF V L+DD+SLTSCPPFSVPHYM
Sbjct: 365 RNSPAFRTPPPAFRTPPASSR-YSRPRG--NGID-SPFDVPLKDDDSLTSCPPFSVPHYM 424

Query: 144 APTVSAKAKLIGCTTP------TSMTTQSKTRISFP-------FKWSKPNLFSNSNNNSS 203
           APTVSAKAKL G +TP       + T++SK RISFP       FKW+K NLFSN      
Sbjct: 425 APTVSAKAKLRGSSTPKERFVVVTPTSESKRRISFPFTQGLGSFKWNKGNLFSN------ 484

Query: 204 SNNNSQRALDNNQSLQSVGNLSVDSTVSLPAG 222
            +++SQR LD NQSLQS GNLSVDSTVSLPAG
Sbjct: 485 KDSSSQRVLDKNQSLQSAGNLSVDSTVSLPAG 506

BLAST of CmoCh17G013890.1 vs. NCBI nr
Match: XP_038907001.1 (protein IQ-DOMAIN 14-like [Benincasa hispida])

HSP 1 Score: 174.1 bits (440), Expect = 1.3e-39
Identity = 97/136 (71.32%), Postives = 113/136 (83.09%), Query Frame = 0

Query: 86  QPSQTSPAAFRTLPANSRSYSRPRSIIHGTDSSPFAVGLRDDESLTSCPPFSVPHYMAPT 145
           +PS+TSP  FRT PA SRS+S+ R      DSSPF VG++DDESLTSCPPF+VPHYMAPT
Sbjct: 367 KPSRTSPNTFRTPPATSRSFSKARG-----DSSPFDVGIKDDESLTSCPPFTVPHYMAPT 426

Query: 146 VSAKAKLIGCTTPTSMTTQSKTRISFPFKWSKPNLFSNSNNNSSSNNNSQRALDNNQSLQ 205
           VSAKAKL GC+TPT ++T SKTRISFPFKW+KPNL    + +SS+NNNSQR LDNN + Q
Sbjct: 427 VSAKAKLRGCSTPTPISTHSKTRISFPFKWNKPNLL--FSKDSSANNNSQRVLDNNYN-Q 486

Query: 206 SVGNLSVDSTVSLPAG 222
           SVGNLSVDS+VSLPAG
Sbjct: 487 SVGNLSVDSSVSLPAG 494

BLAST of CmoCh17G013890.1 vs. NCBI nr
Match: XP_008460009.1 (PREDICTED: protein IQ-DOMAIN 14-like [Cucumis melo])

HSP 1 Score: 153.3 bits (386), Expect = 2.5e-33
Identity = 102/151 (67.55%), Postives = 113/151 (74.83%), Query Frame = 0

Query: 86  QPSQTSPAAFRT-LPANSRSYSRPRSIIHGTDSSP-FAVGLRDDESLTSCPPFSVPHYMA 145
           +PS+ SP  FRT  P  SRS+SR R I H   SSP F VG++DDESLTSCPPFSVPHYMA
Sbjct: 380 KPSRLSPNMFRTPPPGTSRSFSRARGIDH---SSPFFDVGIKDDESLTSCPPFSVPHYMA 439

Query: 146 PTVSAKAKLIGCTTPTSMT-TQSKTRISFPFKW-SKPN-LFSN--SNNNSSSNNNSQRAL 205
           PTVSAKAKL GC+TPT +T  QSKTRISFPFKW +KPN LFSN  SN +SS N NSQR L
Sbjct: 440 PTVSAKAKLRGCSTPTPITNNQSKTRISFPFKWNNKPNLLFSNNSSNKDSSPNINSQRGL 499

Query: 206 D--------NNQSLQSVGNLSVDSTVSLPAG 222
           D        NN + QSVGNLSVDS+ SLPAG
Sbjct: 500 DYNNNNNNNNNHNNQSVGNLSVDSSTSLPAG 527

BLAST of CmoCh17G013890.1 vs. NCBI nr
Match: XP_023004119.1 (protein IQ-DOMAIN 14-like [Cucurbita maxima])

HSP 1 Score: 152.9 bits (385), Expect = 3.2e-33
Identity = 86/144 (59.72%), Postives = 106/144 (73.61%), Query Frame = 0

Query: 80  HRSLQNQPSQTSPAAFRTLP-ANSRSYSRPRSIIHGTD-SSPFAVGLRDDESLTSCPPFS 139
           H  +  +P++ SP AFRT P  +SR YSR +  ++G D  SP+ V L+DDESLTSCPPF+
Sbjct: 326 HHPILPKPTRNSPVAFRTPPGGSSRWYSRQKGSMNGADCCSPYDVALKDDESLTSCPPFT 385

Query: 140 VPHYMAPTVSAKAKLIGCTTPTSMTTQSKTRISFPFKWSKPNLFSNSNNNSSSNNNSQRA 199
           VP YM PTVSAKAKL GC TP  + T SKTR+SFPFKW+KPNLF+NS  + S + N+Q  
Sbjct: 386 VPRYMTPTVSAKAKLRGCATPPPLDTHSKTRLSFPFKWNKPNLFTNSKKD-SGDKNAQMG 445

Query: 200 LDNNQSLQSVGNLSVDSTVSLPAG 222
           L+  QSLQS  NLS+DST SLPAG
Sbjct: 446 LNKIQSLQSFSNLSLDSTASLPAG 468

BLAST of CmoCh17G013890.1 vs. NCBI nr
Match: XP_023513663.1 (protein IQ-DOMAIN 14-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 149.8 bits (377), Expect = 2.7e-32
Identity = 87/145 (60.00%), Postives = 108/145 (74.48%), Query Frame = 0

Query: 80  HRSLQNQPSQTSPAAFRTLP-ANSRSYSRPRSIIHGTD-SSPFAVGLRDDESLTSCPPFS 139
           H  +  +P++ SPAAFRT P  +SR YSRP+  ++G +  SP+ V L+DDESLTSCPPF+
Sbjct: 321 HHQILPKPTRNSPAAFRTPPGGSSRWYSRPKGSMNGAECCSPYDVALKDDESLTSCPPFT 380

Query: 140 VPHYMAPTVSAKAKLIGCTTPTSMTT-QSKTRISFPFKWSKPNLFSNSNNNSSSNNNSQR 199
           VP YM PTVSAKAKL GC TP  + T  SKTR+SF FKW+KPNLFSNS  + S + N+Q 
Sbjct: 381 VPRYMTPTVSAKAKLRGCATPPPIDTHSSKTRLSFGFKWNKPNLFSNSKKD-SGDKNAQM 440

Query: 200 ALDNNQSLQSVGNLSVDSTVSLPAG 222
            L+  QSLQS+ NLS+DST SLPAG
Sbjct: 441 GLNKIQSLQSLSNLSLDSTASLPAG 464

BLAST of CmoCh17G013890.1 vs. NCBI nr
Match: KAG7025382.1 (Protein IQ-DOMAIN 14 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 148.3 bits (373), Expect = 7.9e-32
Identity = 86/145 (59.31%), Postives = 107/145 (73.79%), Query Frame = 0

Query: 80  HRSLQNQPSQTSPAAFRTLP-ANSRSYSRPRSIIHGTD-SSPFAVGLRDDESLTSCPPFS 139
           H  +  +P++ SPA FRT P  +SR YSRP+  ++G +  SP+ V L+DDESLTSCPPF+
Sbjct: 321 HHQILPKPTRNSPAVFRTPPGGSSRWYSRPKGSMNGAECCSPYDVALKDDESLTSCPPFT 380

Query: 140 VPHYMAPTVSAKAKLIGCTTPTSMTT-QSKTRISFPFKWSKPNLFSNSNNNSSSNNNSQR 199
           VP YM PTVSAKAKL GC TP  + T  SKTR+SF FKW+KPNLFSNS  + S + N+Q 
Sbjct: 381 VPRYMTPTVSAKAKLRGCATPPPIDTHSSKTRLSFGFKWNKPNLFSNSKKD-SGDKNAQM 440

Query: 200 ALDNNQSLQSVGNLSVDSTVSLPAG 222
            L+  QSLQS+ NLS+DST SLPAG
Sbjct: 441 GLNKIQSLQSLSNLSLDSTASLPAG 464

BLAST of CmoCh17G013890.1 vs. TAIR 10
Match: AT3G59690.1 (IQ-domain 13 )

HSP 1 Score: 94.0 bits (232), Expect = 1.6e-19
Identity = 63/118 (53.39%), Postives = 81/118 (68.64%), Query Frame = 0

Query: 115 TDSSPFAVGLRDDESLTSCPPFSVPHYMAPTVSAKAKLIGCTTP------TSMTTQSKTR 174
           T  SPF    +DD+SLTSCPPFS P YMAPTVSAKAKL   + P      T ++T  K R
Sbjct: 393 TQDSPF----KDDDSLTSCPPFSAPSYMAPTVSAKAKLRANSNPKERMDRTPVSTNEKRR 452

Query: 175 ISFP---FKWSKPNLF-SNSNNNSSSNNNSQRA--LDNNQSLQSVGNLSVDSTVSLPA 221
            SFP   FKW+K +LF SN++NN    ++S  A  L+ +++L+SVGNLS+DSTVS+PA
Sbjct: 453 SSFPLGSFKWNKGSLFMSNNSNNKGPGSSSSGAVVLEKHKTLKSVGNLSIDSTVSMPA 506

BLAST of CmoCh17G013890.1 vs. TAIR 10
Match: AT2G43680.2 (IQ-domain 14 )

HSP 1 Score: 65.9 bits (159), Expect = 4.8e-11
Identity = 60/150 (40.00%), Postives = 84/150 (56.00%), Query Frame = 0

Query: 79  SHRSLQNQPSQTSPAAFRTLPANSRSYSRPRSIIHGTDSSPFAVGLRDDESLTSCPPFSV 138
           S RS  + PS       R +   +  YSR R  + G D SPF    +DD+SLTSCPPF  
Sbjct: 522 SSRSTFHTPS-------RPIHTGTSRYSRGR--LRGQD-SPF----KDDDSLTSCPPF-- 581

Query: 139 PHYMAPTVSAKAKLIGCTTPTSMT----TQSKTRISFP-----FKWSKPNL-FSNSNNNS 198
           P YMAPTVSAKAK+   + P           K R+S+P     F+W+K +L  SNS+++ 
Sbjct: 582 PSYMAPTVSAKAKVRPNSNPKERVMGTPVSEKRRMSYPPTQDTFRWNKGSLVMSNSSSHR 641

Query: 199 SSNNNSQRALDNNQSLQSVGNLSVDSTVSL 219
              +     L+ +++L+SVGNLS+ ST S+
Sbjct: 642 GPGSPGGVVLEKHKTLKSVGNLSIGSTASM 655

BLAST of CmoCh17G013890.1 vs. TAIR 10
Match: AT2G43680.1 (IQ-domain 14 )

HSP 1 Score: 65.9 bits (159), Expect = 4.8e-11
Identity = 60/150 (40.00%), Postives = 84/150 (56.00%), Query Frame = 0

Query: 79  SHRSLQNQPSQTSPAAFRTLPANSRSYSRPRSIIHGTDSSPFAVGLRDDESLTSCPPFSV 138
           S RS  + PS       R +   +  YSR R  + G D SPF    +DD+SLTSCPPF  
Sbjct: 523 SSRSTFHTPS-------RPIHTGTSRYSRGR--LRGQD-SPF----KDDDSLTSCPPF-- 582

Query: 139 PHYMAPTVSAKAKLIGCTTPTSMT----TQSKTRISFP-----FKWSKPNL-FSNSNNNS 198
           P YMAPTVSAKAK+   + P           K R+S+P     F+W+K +L  SNS+++ 
Sbjct: 583 PSYMAPTVSAKAKVRPNSNPKERVMGTPVSEKRRMSYPPTQDTFRWNKGSLVMSNSSSHR 642

Query: 199 SSNNNSQRALDNNQSLQSVGNLSVDSTVSL 219
              +     L+ +++L+SVGNLS+ ST S+
Sbjct: 643 GPGSPGGVVLEKHKTLKSVGNLSIGSTASM 656

BLAST of CmoCh17G013890.1 vs. TAIR 10
Match: AT2G43680.3 (IQ-domain 14 )

HSP 1 Score: 65.9 bits (159), Expect = 4.8e-11
Identity = 60/150 (40.00%), Postives = 84/150 (56.00%), Query Frame = 0

Query: 79  SHRSLQNQPSQTSPAAFRTLPANSRSYSRPRSIIHGTDSSPFAVGLRDDESLTSCPPFSV 138
           S RS  + PS       R +   +  YSR R  + G D SPF    +DD+SLTSCPPF  
Sbjct: 522 SSRSTFHTPS-------RPIHTGTSRYSRGR--LRGQD-SPF----KDDDSLTSCPPF-- 581

Query: 139 PHYMAPTVSAKAKLIGCTTPTSMT----TQSKTRISFP-----FKWSKPNL-FSNSNNNS 198
           P YMAPTVSAKAK+   + P           K R+S+P     F+W+K +L  SNS+++ 
Sbjct: 582 PSYMAPTVSAKAKVRPNSNPKERVMGTPVSEKRRMSYPPTQDTFRWNKGSLVMSNSSSHR 641

Query: 199 SSNNNSQRALDNNQSLQSVGNLSVDSTVSL 219
              +     L+ +++L+SVGNLS+ ST S+
Sbjct: 642 GPGSPGGVVLEKHKTLKSVGNLSIGSTASM 655

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9M1992.3e-1853.39Protein IQ-DOMAIN 13 OS=Arabidopsis thaliana OX=3702 GN=IQD13 PE=1 SV=1[more]
Q8LPG96.8e-1040.00Protein IQ-DOMAIN 14 OS=Arabidopsis thaliana OX=3702 GN=IQD14 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
A0A1S3CB251.2e-3367.55protein IQ-DOMAIN 14-like OS=Cucumis melo OX=3656 GN=LOC103498953 PE=4 SV=1[more]
A0A6J1KVB41.6e-3359.72protein IQ-DOMAIN 14-like OS=Cucurbita maxima OX=3661 GN=LOC111497546 PE=4 SV=1[more]
A0A6J1H7V43.8e-3259.31protein IQ-DOMAIN 14-like OS=Cucurbita moschata OX=3662 GN=LOC111461242 PE=4 SV=... [more]
A0A0A0K9941.5e-3160.78Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G087690 PE=4 SV=1[more]
A0A6J1DMF71.9e-3162.50protein IQ-DOMAIN 14-like OS=Momordica charantia OX=3673 GN=LOC111022581 PE=4 SV... [more]
Match NameE-valueIdentityDescription
XP_038907001.11.3e-3971.32protein IQ-DOMAIN 14-like [Benincasa hispida][more]
XP_008460009.12.5e-3367.55PREDICTED: protein IQ-DOMAIN 14-like [Cucumis melo][more]
XP_023004119.13.2e-3359.72protein IQ-DOMAIN 14-like [Cucurbita maxima][more]
XP_023513663.12.7e-3260.00protein IQ-DOMAIN 14-like [Cucurbita pepo subsp. pepo][more]
KAG7025382.17.9e-3259.31Protein IQ-DOMAIN 14 [Cucurbita argyrosperma subsp. argyrosperma][more]
Match NameE-valueIdentityDescription
AT3G59690.11.6e-1953.39IQ-domain 13 [more]
AT2G43680.24.8e-1140.00IQ-domain 14 [more]
AT2G43680.14.8e-1140.00IQ-domain 14 [more]
AT2G43680.34.8e-1140.00IQ-domain 14 [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025064Domain of unknown function DUF4005PFAMPF13178DUF4005coord: 116..203
e-value: 5.1E-5
score: 23.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 182..221
NoneNo IPR availablePANTHERPTHR32295IQ-DOMAIN 5-RELATEDcoord: 79..220
NoneNo IPR availablePANTHERPTHR32295:SF113IQ-DOMAIN 13coord: 79..220

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CmoCh17G013890CmoCh17G013890gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmoCh17G013890.1:exon:861CmoCh17G013890.1:exon:861exon
CmoCh17G013890.1:exon:860CmoCh17G013890.1:exon:860exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmoCh17G013890.1:cdsCmoCh17G013890.1:cds_2CDS
CmoCh17G013890.1:cdsCmoCh17G013890.1:cdsCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CmoCh17G013890.1CmoCh17G013890.1-proteinpolypeptide