CmoCh17G013690.1 (mRNA) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh17G013690.1
Type	mRNA
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	auxin-responsive protein SAUR36-like
Location	Cmo_Chr17: 10631575 .. 10632190 (+)
Sequence length	540
RNA-Seq Expression	CmoCh17G013690.1
Synteny	CmoCh17G013690.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTTGAGTCGAGAGAAAGTGAAGAACAAGGGACTGATCTTGAAAACCTGGGAGCGCTGCAAGACGATCGGCCGAGGGGGAAGAAATTCACCGTCCTCCGCCGCAATAAAACGATTCTTAACGAGGAAGTCAAAATCATGGCCTCGCCTGGAGCTCATCTCCGGCGGAGAAGACAAGGACGAGGACGAGGAGGAACGGTGGCGGAGCTATGGCCGGACGCGTAGAGTGGCGCCGGAAGGTTGTTTCACGGTGTACGTCGGAGCGGAGAGGCAGAGATTTGTGATCCCAACAGAGTATGCGAATCATCCTCTGTTCCGGTCGCTGTTGGAAGAGGCGGAGGCGGAATACGGGTACAACTGCCAGGCGCCGCTGTCGTTGCCGTGCGATGTAGAGAGTTTTTACAGAGTGCTGATGGAGATGGACGACGGCGCCGCCGATCTCCGCCGTGGATGTGGATACCCTACTCCCAAGAGATTTGGATCTTACCATCTTCTCAGTCCCCGTTCTTCATCTCTCGTTGTAAATCAGTTCCACTTCTGATTCTCTCATCTCTCTGTGGAAATTAAATGTGGTTTTGTGTATTTCGTGGGTTTAGATTTTAGCATATGCCTAG

mRNA sequence

ATGGATTTGAGTCGAGAGAAAGTGAAGAACAAGGGACTGATCTTGAAAACCTGGGAGCGCTGCAAGACGATCGGCCGAGGGGGAAGAAATTCACCGTCCTCCGCCGCAATAAAACGATTCTTAACGAGGAAGTCAAAATCATGGCCTCGCCTGGAGCTCATCTCCGGCGGAGAAGACAAGGACGAGGACGAGGAGGAACGGTGGCGGAGCTATGGCCGGACGCGTAGAGTGGCGCCGGAAGGTTGTTTCACGGTGTACGTCGGAGCGGAGAGGCAGAGATTTGTGATCCCAACAGAGTATGCGAATCATCCTCTGTTCCGGTCGCTGTTGGAAGAGGCGGAGGCGGAATACGGGTACAACTGCCAGGCGCCGCTGTCGTTGCCGTGCGATGTAGAGAGTTTTTACAGAGTGCTGATGGAGATGGACGACGGCGCCGCCGATCTCCGCCGTGGATGTGGATACCCTACTCCCAAGAGATTTGGATCTTACCATCTTCTCAGTCCCCGTTCTTCATCTCTCGTTATTTTAGCATATGCCTAG

Coding sequence (CDS)

ATGGATTTGAGTCGAGAGAAAGTGAAGAACAAGGGACTGATCTTGAAAACCTGGGAGCGCTGCAAGACGATCGGCCGAGGGGGAAGAAATTCACCGTCCTCCGCCGCAATAAAACGATTCTTAACGAGGAAGTCAAAATCATGGCCTCGCCTGGAGCTCATCTCCGGCGGAGAAGACAAGGACGAGGACGAGGAGGAACGGTGGCGGAGCTATGGCCGGACGCGTAGAGTGGCGCCGGAAGGTTGTTTCACGGTGTACGTCGGAGCGGAGAGGCAGAGATTTGTGATCCCAACAGAGTATGCGAATCATCCTCTGTTCCGGTCGCTGTTGGAAGAGGCGGAGGCGGAATACGGGTACAACTGCCAGGCGCCGCTGTCGTTGCCGTGCGATGTAGAGAGTTTTTACAGAGTGCTGATGGAGATGGACGACGGCGCCGCCGATCTCCGCCGTGGATGTGGATACCCTACTCCCAAGAGATTTGGATCTTACCATCTTCTCAGTCCCCGTTCTTCATCTCTCGTTATTTTAGCATATGCCTAG

Protein sequence

MDLSREKVKNKGLILKTWERCKTIGRGGRNSPSSAAIKRFLTRKSKSWPRLELISGGEDKDEDEEERWRSYGRTRRVAPEGCFTVYVGAERQRFVIPTEYANHPLFRSLLEEAEAEYGYNCQAPLSLPCDVESFYRVLMEMDDGAADLRRGCGYPTPKRFGSYHLLSPRSSSLVILAYA

Homology

[Close]

BLAST of CmoCh17G013690.1 vs. ExPASy Swiss-Prot
Match: Q9ZUZ3 (Auxin-responsive protein SAUR32 OS=Arabidopsis thaliana OX=3702 GN=SAUR32 PE=2 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 5.8e-12
Identity = 33/76 (43.42%), Postives = 49/76 (64.47%), Query Frame = 0


Query: 79  PEGCFTVYVGA---ERQRFVIPTEYANHPLFRSLLEEAEAEYGYNCQAPLSLPCDVESFY 138
           P+GC  + VG+   E+QRF++P  Y NHPLF  LL+EAE EYG++ +  +++PC VE F 
Sbjct: 25  PKGCLAIKVGSQGEEQQRFIVPVLYFNHPLFMQLLKEAEDEYGFDQKGTITIPCHVEEF- 84

Query: 139 RVLMEMDDGAADLRRG 152
           R +  + DG   +  G
Sbjct: 85  RYVQALIDGERSVYNG 99

[Close]

BLAST of CmoCh17G013690.1 vs. ExPASy Swiss-Prot
Match: Q9SGU2 (Auxin-responsive protein SAUR71 OS=Arabidopsis thaliana OX=3702 GN=SAUR71 PE=2 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 2.2e-11
Identity = 36/81 (44.44%), Postives = 48/81 (59.26%), Query Frame = 0


Query: 72  GRTRRV-----APEGCFTVYVGAERQRFVIPTEYANHPLFRSLLEEAEAEYGYNCQAPLS 131
           GRT++       PEG   VYVG E +RFV+  E  NHP+F +LL+++  EYGY  Q  L 
Sbjct: 27  GRTKKEKHKSWVPEGHVPVYVGHEMERFVVNAELLNHPVFVALLKQSAQEYGYEQQGVLR 86

Query: 132 LPCDVESFYRVLMEMDDGAAD 148
           +PC V  F R+L  +  G AD
Sbjct: 87  IPCHVLVFERILESLRLGLAD 107

[Close]

BLAST of CmoCh17G013690.1 vs. ExPASy Swiss-Prot
Match: Q9SL45 (Protein SMALL AUXIN UP-REGULATED RNA 10 OS=Arabidopsis thaliana OX=3702 GN=SAUR10 PE=2 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 2.1e-09
Identity = 36/118 (30.51%), Postives = 64/118 (54.24%), Query Frame = 0


Query: 24  IGRGGRNSPSSAAIKRFLTRKSKSWPRLELISGGEDKDEDEEERWRSYGRTRRVAPEGCF 83
           I R  + + S AA  + + ++  S  +++ ++G     ED+           +  P+G F
Sbjct: 3   IKRSSKATSSQAASIKQIVKRCSSLRKMKNVNGCYYNQEDD---------LPQDVPKGHF 62

Query: 84  TVYVGAERQRFVIPTEYANHPLFRSLLEEAEAEYGYNCQAPLSLPCDVESFYRVLMEM 142
            VYVG  R R+++P  + +H  F++LL  AE E+G++    L++PCD E F+R L+ M
Sbjct: 63  PVYVGPNRSRYIVPISWLHHSEFQTLLRLAEEEFGFDHDMGLTIPCD-EVFFRSLISM 110

[Close]

BLAST of CmoCh17G013690.1 vs. ExPASy Swiss-Prot
Match: O65695 (Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 3.5e-09
Identity = 27/63 (42.86%), Postives = 41/63 (65.08%), Query Frame = 0


Query: 79  PEGCFTVYVGAERQRFVIPTEYANHPLFRSLLEEAEAEYGYNCQAPLSLPCDVESFYRVL 138
           P+G F VYVG  R R+++P  +  HP F+SLL+ AE E+G++    L++PCD E  ++ L
Sbjct: 44  PKGHFPVYVGENRSRYIVPISFLTHPEFQSLLQRAEEEFGFDHDMGLTIPCD-ELVFQTL 103

Query: 139 MEM 142
             M
Sbjct: 104 TSM 105

[Close]

BLAST of CmoCh17G013690.1 vs. ExPASy Swiss-Prot
Match: P33082 (Auxin-induced protein X15 OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 4.6e-09
Identity = 29/61 (47.54%), Postives = 39/61 (63.93%), Query Frame = 0


Query: 78  APEGCFTVYVGAERQRFVIPTEYANHPLFRSLLEEAEAEYGY-NCQAPLSLPCDVESFYR 137
           AP+G   VYVG + +RFVIP  Y N P F+ LL +AE E+GY +    L++PC  E F R
Sbjct: 17  APKGYLAVYVGEKMKRFVIPVSYMNQPSFQDLLTQAEEEFGYDHPMGGLTIPCSEEVFQR 76

[Close]

BLAST of CmoCh17G013690.1 vs. ExPASy TrEMBL
Match: A0A6J1GPI0 (uncharacterized protein LOC111456287 OS=Cucurbita moschata OX=3662 GN=LOC111456287 PE=3 SV=1)

HSP 1 Score: 364.4 bits (934), Expect = 2.7e-97
Identity = 174/175 (99.43%), Postives = 175/175 (100.00%), Query Frame = 0


Query: 1   MDLSREKVKNKGLILKTWERCKTIGRGGRNSPSSAAIKRFLTRKSKSWPRLELISGGEDK 60
           MDLSREKVKNKGLILKTWERCKTIGRGGRNSPSSAAIKRFLTRKSKSWPRLELISGGEDK
Sbjct: 1   MDLSREKVKNKGLILKTWERCKTIGRGGRNSPSSAAIKRFLTRKSKSWPRLELISGGEDK 60

Query: 61  DEDEEERWRSYGRTRRVAPEGCFTVYVGAERQRFVIPTEYANHPLFRSLLEEAEAEYGYN 120
           DEDEEERWRSYGRTRRVAPEGCFTVYVGAERQRFVIPTEYANHPLFRSLLEEAEAEYGYN
Sbjct: 61  DEDEEERWRSYGRTRRVAPEGCFTVYVGAERQRFVIPTEYANHPLFRSLLEEAEAEYGYN 120

Query: 121 CQAPLSLPCDVESFYRVLMEMDDGAADLRRGCGYPTPKRFGSYHLLSPRSSSLVI 176
           CQAPLSLPCDVESFYRVLMEMDDGAADLRRGCGYPTPKRFGSYHLLSPRSSSLV+
Sbjct: 121 CQAPLSLPCDVESFYRVLMEMDDGAADLRRGCGYPTPKRFGSYHLLSPRSSSLVV 175

[Close]

BLAST of CmoCh17G013690.1 vs. ExPASy TrEMBL
Match: A0A6J1KVV9 (auxin-responsive protein SAUR36-like OS=Cucurbita maxima OX=3661 GN=LOC111498073 PE=3 SV=1)

HSP 1 Score: 305.4 bits (781), Expect = 1.5e-79
Identity = 149/176 (84.66%), Postives = 159/176 (90.34%), Query Frame = 0


Query: 1   MDLSREKVKNKGLILKTWERCKTIGRGGRNSPSSAAIKRFLTRKSKSWPRLELISGGEDK 60
           MD SREKVKNKGLI KTWERCK+ GRG R SPSSA IKRFLTRK+KSWPRLE+ISGGEDK
Sbjct: 1   MDFSREKVKNKGLIFKTWERCKSFGRGRRTSPSSAGIKRFLTRKTKSWPRLEVISGGEDK 60

Query: 61  DEDEEERWRSYGRTRRVAPEGCFTVYVGAERQRFVIPTEYANHPLFRSLLEEAEAEYGYN 120
             DEEER RS+GR RRVAPEGCFTVYVGA+RQRFVI TEYANHPLFRSLL+EAEAEYGYN
Sbjct: 61  --DEEERRRSFGRKRRVAPEGCFTVYVGADRQRFVIRTEYANHPLFRSLLKEAEAEYGYN 120

Query: 121 CQAPLSLPCDVESFYRVLMEMDDGAADLRRGCGYPTPKRFGSYHLLSPRSSSLVIL 177
           CQAPLSLPCDVESFY VLMEMDDGAAD+R GCG+PTPKR GSYHL SP SSS +I+
Sbjct: 121 CQAPLSLPCDVESFYGVLMEMDDGAADVRCGCGHPTPKRIGSYHLPSPGSSSSLIV 174

[Close]

BLAST of CmoCh17G013690.1 vs. ExPASy TrEMBL
Match: A0A6J1HAW5 (uncharacterized protein LOC111461130 OS=Cucurbita moschata OX=3662 GN=LOC111461130 PE=3 SV=1)

HSP 1 Score: 297.4 bits (760), Expect = 4.1e-77
Identity = 145/176 (82.39%), Postives = 158/176 (89.77%), Query Frame = 0


Query: 1   MDLSREKVKNKGLILKTWERCKTIGRGGRNSPSSAAIKRFLTRKSKSWPRLELISGGEDK 60
           MD +REKVKN+GLILKTWERCK+ GRG R SPSSA IKRFLTRK+KSWPRLE+ISG  ++
Sbjct: 1   MDFTREKVKNQGLILKTWERCKSFGRGRRTSPSSAGIKRFLTRKTKSWPRLEVISG--EE 60

Query: 61  DEDEEERWRSYGRTRRVAPEGCFTVYVGAERQRFVIPTEYANHPLFRSLLEEAEAEYGYN 120
           DEDEEER RS+ R RRVAPEGCFTVYVGAERQRF I TEYANHPLFRSLL+EAEAEYGYN
Sbjct: 61  DEDEEERRRSFRRKRRVAPEGCFTVYVGAERQRFAIRTEYANHPLFRSLLKEAEAEYGYN 120

Query: 121 CQAPLSLPCDVESFYRVLMEMDDGAADLRRGCGYPTPKRFGSYHLLSPRSSSLVIL 177
           CQAPLSLPCDVESFY VLMEMDDGAAD+R GCG+PTPKR GSYHL SP SSS +I+
Sbjct: 121 CQAPLSLPCDVESFYGVLMEMDDGAADVRCGCGHPTPKRIGSYHLPSPGSSSSLIV 174

[Close]

BLAST of CmoCh17G013690.1 vs. ExPASy TrEMBL
Match: A0A0A0KC76 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G092560 PE=3 SV=1)

HSP 1 Score: 292.4 bits (747), Expect = 1.3e-75
Identity = 151/176 (85.80%), Postives = 158/176 (89.77%), Query Frame = 0


Query: 1   MDLSREKVKNKGLILKTWERCKTIGRGGRNSPSSAAIKRFLTRKSKSWPRLELISGGEDK 60
           MDLSREKVKNKGLILKTWERCK++GRG RNSPSS  IKRFLTRK+KS PRLE+ SGGE  
Sbjct: 1   MDLSREKVKNKGLILKTWERCKSMGRGQRNSPSSTGIKRFLTRKTKSLPRLEVFSGGE-- 60

Query: 61  DEDEEERWRSYGRTRRVAPEGCFTVYVGAERQRFVIPTEYANHPLFRSLLEEAEAEYGYN 120
           DEDE+ER RS  R RRVAPEGCFTVYVGAERQRFVI TE ANHPLFRSLLEEAEAEYGYN
Sbjct: 61  DEDEKERRRS--RKRRVAPEGCFTVYVGAERQRFVIKTECANHPLFRSLLEEAEAEYGYN 120

Query: 121 CQAPLSLPCDVESFYRVLMEM-DDGAADLRRGCGYPTPKRFGSYHLLSPRSSSLVI 176
           CQAPLSLPCDVESFY VLMEM DD A DLRRGCGYPTPKRFG Y+LLSPRSSSLV+
Sbjct: 121 CQAPLSLPCDVESFYSVLMEMDDDSAGDLRRGCGYPTPKRFG-YNLLSPRSSSLVV 171

[Close]

BLAST of CmoCh17G013690.1 vs. ExPASy TrEMBL
Match: A0A1S4E3G0 (auxin-responsive protein SAUR36 OS=Cucumis melo OX=3656 GN=LOC103498869 PE=3 SV=1)

HSP 1 Score: 288.1 bits (736), Expect = 2.5e-74
Identity = 147/176 (83.52%), Postives = 155/176 (88.07%), Query Frame = 0


Query: 1   MDLSREKVKNKGLILKTWERCKTIGRGGRNSPSSAAIKRFLTRKSKSWPRLELISGGEDK 60
           MDLSREKVKNKGLILKTWERCK++GRG  NSPSS  IKRFLTRK+KS PRLE+ SGGED+
Sbjct: 1   MDLSREKVKNKGLILKTWERCKSMGRGQGNSPSSTRIKRFLTRKTKSLPRLEVFSGGEDE 60

Query: 61  DEDEEERWRSYGRTRRVAPEGCFTVYVGAERQRFVIPTEYANHPLFRSLLEEAEAEYGYN 120
           DE E  R R     RRVAPEGCFTVYVGAERQRFVI TE ANHPLFRSLLEEAEAEYGYN
Sbjct: 61  DEKERRRCRK----RRVAPEGCFTVYVGAERQRFVIKTECANHPLFRSLLEEAEAEYGYN 120

Query: 121 CQAPLSLPCDVESFYRVLMEMDDG-AADLRRGCGYPTPKRFGSYHLLSPRSSSLVI 176
           CQAPLSLPCDVESFY VLMEMDD  A+DLRRGCGYPTPKRFG Y+LLSPRSSSLV+
Sbjct: 121 CQAPLSLPCDVESFYSVLMEMDDDTASDLRRGCGYPTPKRFG-YNLLSPRSSSLVV 171

[Close]

BLAST of CmoCh17G013690.1 vs. NCBI nr
Match: XP_022953882.1 (uncharacterized protein LOC111456287 [Cucurbita moschata])

HSP 1 Score: 364.4 bits (934), Expect = 5.7e-97
Identity = 174/175 (99.43%), Postives = 175/175 (100.00%), Query Frame = 0


Query: 1   MDLSREKVKNKGLILKTWERCKTIGRGGRNSPSSAAIKRFLTRKSKSWPRLELISGGEDK 60
           MDLSREKVKNKGLILKTWERCKTIGRGGRNSPSSAAIKRFLTRKSKSWPRLELISGGEDK
Sbjct: 1   MDLSREKVKNKGLILKTWERCKTIGRGGRNSPSSAAIKRFLTRKSKSWPRLELISGGEDK 60

Query: 61  DEDEEERWRSYGRTRRVAPEGCFTVYVGAERQRFVIPTEYANHPLFRSLLEEAEAEYGYN 120
           DEDEEERWRSYGRTRRVAPEGCFTVYVGAERQRFVIPTEYANHPLFRSLLEEAEAEYGYN
Sbjct: 61  DEDEEERWRSYGRTRRVAPEGCFTVYVGAERQRFVIPTEYANHPLFRSLLEEAEAEYGYN 120

Query: 121 CQAPLSLPCDVESFYRVLMEMDDGAADLRRGCGYPTPKRFGSYHLLSPRSSSLVI 176
           CQAPLSLPCDVESFYRVLMEMDDGAADLRRGCGYPTPKRFGSYHLLSPRSSSLV+
Sbjct: 121 CQAPLSLPCDVESFYRVLMEMDDGAADLRRGCGYPTPKRFGSYHLLSPRSSSLVV 175

[Close]

BLAST of CmoCh17G013690.1 vs. NCBI nr
Match: KAG6576118.1 (Auxin-responsive protein SAUR32, partial [Cucurbita argyrosperma subsp. sororia] >KAG7014637.1 Auxin-responsive protein SAUR32, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 362.8 bits (930), Expect = 1.7e-96
Identity = 173/175 (98.86%), Postives = 174/175 (99.43%), Query Frame = 0


Query: 1   MDLSREKVKNKGLILKTWERCKTIGRGGRNSPSSAAIKRFLTRKSKSWPRLELISGGEDK 60
           MDLSREKVKNKGLILKTWERCKTIGRGGRNSPSSA IKRFLTRKSKSWPRLELISGGEDK
Sbjct: 1   MDLSREKVKNKGLILKTWERCKTIGRGGRNSPSSAGIKRFLTRKSKSWPRLELISGGEDK 60

Query: 61  DEDEEERWRSYGRTRRVAPEGCFTVYVGAERQRFVIPTEYANHPLFRSLLEEAEAEYGYN 120
           DEDEEERWRSYGRTRRVAPEGCFTVYVGAERQRFVIPTEYANHPLFRSLLEEAEAEYGYN
Sbjct: 61  DEDEEERWRSYGRTRRVAPEGCFTVYVGAERQRFVIPTEYANHPLFRSLLEEAEAEYGYN 120

Query: 121 CQAPLSLPCDVESFYRVLMEMDDGAADLRRGCGYPTPKRFGSYHLLSPRSSSLVI 176
           CQAPLSLPCDVESFYRVLMEMDDGAADLRRGCGYPTPKRFGSYHLLSPRSSSLV+
Sbjct: 121 CQAPLSLPCDVESFYRVLMEMDDGAADLRRGCGYPTPKRFGSYHLLSPRSSSLVV 175

[Close]

BLAST of CmoCh17G013690.1 vs. NCBI nr
Match: XP_023547520.1 (uncharacterized protein LOC111806437 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 361.7 bits (927), Expect = 3.7e-96
Identity = 172/175 (98.29%), Postives = 174/175 (99.43%), Query Frame = 0


Query: 1   MDLSREKVKNKGLILKTWERCKTIGRGGRNSPSSAAIKRFLTRKSKSWPRLELISGGEDK 60
           MDLSREKVKNKGLILKTWERCKTIGRGGRNSPSSA IKRFLTRKSKSWPRLELISGGEDK
Sbjct: 1   MDLSREKVKNKGLILKTWERCKTIGRGGRNSPSSAGIKRFLTRKSKSWPRLELISGGEDK 60

Query: 61  DEDEEERWRSYGRTRRVAPEGCFTVYVGAERQRFVIPTEYANHPLFRSLLEEAEAEYGYN 120
           DEDEEERWRSYGRTR+VAPEGCFTVYVGAERQRFVIPTEYANHPLFRSLLEEAEAEYGYN
Sbjct: 61  DEDEEERWRSYGRTRKVAPEGCFTVYVGAERQRFVIPTEYANHPLFRSLLEEAEAEYGYN 120

Query: 121 CQAPLSLPCDVESFYRVLMEMDDGAADLRRGCGYPTPKRFGSYHLLSPRSSSLVI 176
           CQAPLSLPCDVESFYRVLMEMDDGAADLRRGCGYPTPKRFGSYHLLSPRSSSLV+
Sbjct: 121 CQAPLSLPCDVESFYRVLMEMDDGAADLRRGCGYPTPKRFGSYHLLSPRSSSLVV 175

[Close]

BLAST of CmoCh17G013690.1 vs. NCBI nr
Match: XP_023004895.1 (auxin-responsive protein SAUR36-like [Cucurbita maxima])

HSP 1 Score: 305.4 bits (781), Expect = 3.1e-79
Identity = 149/176 (84.66%), Postives = 159/176 (90.34%), Query Frame = 0


Query: 1   MDLSREKVKNKGLILKTWERCKTIGRGGRNSPSSAAIKRFLTRKSKSWPRLELISGGEDK 60
           MD SREKVKNKGLI KTWERCK+ GRG R SPSSA IKRFLTRK+KSWPRLE+ISGGEDK
Sbjct: 1   MDFSREKVKNKGLIFKTWERCKSFGRGRRTSPSSAGIKRFLTRKTKSWPRLEVISGGEDK 60

Query: 61  DEDEEERWRSYGRTRRVAPEGCFTVYVGAERQRFVIPTEYANHPLFRSLLEEAEAEYGYN 120
             DEEER RS+GR RRVAPEGCFTVYVGA+RQRFVI TEYANHPLFRSLL+EAEAEYGYN
Sbjct: 61  --DEEERRRSFGRKRRVAPEGCFTVYVGADRQRFVIRTEYANHPLFRSLLKEAEAEYGYN 120

Query: 121 CQAPLSLPCDVESFYRVLMEMDDGAADLRRGCGYPTPKRFGSYHLLSPRSSSLVIL 177
           CQAPLSLPCDVESFY VLMEMDDGAAD+R GCG+PTPKR GSYHL SP SSS +I+
Sbjct: 121 CQAPLSLPCDVESFYGVLMEMDDGAADVRCGCGHPTPKRIGSYHLPSPGSSSSLIV 174

[Close]

BLAST of CmoCh17G013690.1 vs. NCBI nr
Match: XP_022960394.1 (uncharacterized protein LOC111461130 [Cucurbita moschata])

HSP 1 Score: 297.4 bits (760), Expect = 8.5e-77
Identity = 145/176 (82.39%), Postives = 158/176 (89.77%), Query Frame = 0


Query: 1   MDLSREKVKNKGLILKTWERCKTIGRGGRNSPSSAAIKRFLTRKSKSWPRLELISGGEDK 60
           MD +REKVKN+GLILKTWERCK+ GRG R SPSSA IKRFLTRK+KSWPRLE+ISG  ++
Sbjct: 1   MDFTREKVKNQGLILKTWERCKSFGRGRRTSPSSAGIKRFLTRKTKSWPRLEVISG--EE 60

Query: 61  DEDEEERWRSYGRTRRVAPEGCFTVYVGAERQRFVIPTEYANHPLFRSLLEEAEAEYGYN 120
           DEDEEER RS+ R RRVAPEGCFTVYVGAERQRF I TEYANHPLFRSLL+EAEAEYGYN
Sbjct: 61  DEDEEERRRSFRRKRRVAPEGCFTVYVGAERQRFAIRTEYANHPLFRSLLKEAEAEYGYN 120

Query: 121 CQAPLSLPCDVESFYRVLMEMDDGAADLRRGCGYPTPKRFGSYHLLSPRSSSLVIL 177
           CQAPLSLPCDVESFY VLMEMDDGAAD+R GCG+PTPKR GSYHL SP SSS +I+
Sbjct: 121 CQAPLSLPCDVESFYGVLMEMDDGAADVRCGCGHPTPKRIGSYHLPSPGSSSSLIV 174

[Close]

BLAST of CmoCh17G013690.1 vs. TAIR 10
Match: AT5G50760.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 89.0 bits (219), Expect = 4.3e-18
Identity = 54/132 (40.91%), Postives = 75/132 (56.82%), Query Frame = 0


Query: 11  KGLILKTWERCKTIGRGGRNSPSSAAIKRFLTRKSKSWPRLELISGGEDKDEDEEERWRS 70
           K  ILKTW + K+ G       SS+    F   KSKS         G  + ED +    S
Sbjct: 2   KNPILKTWRKVKSFGH-----TSSSTTPSF--TKSKS-------CHGSFRLEDAKSN-ES 61

Query: 71  YGRTRRVAP-EGCFTVYVGAERQRFVIPTEYANHPLFRSLLEEAEAEYGYNCQAPLSLPC 130
            G+ ++ +P  G FTVYVG  +QR V+ T+  NHPLF++LLE+AE EYGY    P+ LPC
Sbjct: 62  KGKPKKESPSHGFFTVYVGPTKQRIVVKTKLLNHPLFKNLLEDAETEYGYRRDGPIVLPC 118

Query: 131 DVESFYRVLMEM 142
           +V+ F++ L +M
Sbjct: 122 EVDFFFKALADM 118

[Close]

BLAST of CmoCh17G013690.1 vs. TAIR 10
Match: AT3G61900.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 79.0 bits (193), Expect = 4.4e-15
Identity = 44/105 (41.90%), Postives = 59/105 (56.19%), Query Frame = 0


Query: 79  PEGCFTVYVGA---ERQRFVIPTEYANHPLFRSLLEEAEAEYGYNCQAPLSLPCDVESFY 138
           P+GC  + VG+   E+QRFV+P  Y NHPLF  LL EAE EYG+  +  +++PC VE F 
Sbjct: 31  PKGCLAIKVGSKEEEKQRFVVPVFYFNHPLFMQLLREAEEEYGFEQKGTITIPCHVEVF- 90

Query: 139 RVLMEM--------DDGAADLRRGCGYPTPKRFGSYHLLSPRSSS 173
           R + +M        DD  A  + GCG     + G  H +  RSSS
Sbjct: 91  RYVQDMINRERSLDDDDDASKQTGCG----AKHGLTHKIRSRSSS 130

[Close]

BLAST of CmoCh17G013690.1 vs. TAIR 10
Match: AT5G20810.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 75.1 bits (183), Expect = 6.4e-14
Identity = 36/89 (40.45%), Postives = 54/89 (60.67%), Query Frame = 0


Query: 60  KDEDEEERWRSYGRTRRVAPEGCFTVYVGAERQRFVIPTEYANHPLFRSLLEEAEAEYGY 119
           K+ D +E            P+G   VYVG E +RF+IPT Y +H LF+ LLE+AE E+G+
Sbjct: 61  KNGDSDEETCQSPEPPHDVPKGNLAVYVGPELRRFIIPTSYLSHSLFKVLLEKAEEEFGF 120

Query: 120 NCQAPLSLPCDVESFYRVLMEMDDGAADL 149
           +    L++PC+VE+F  +L  M++   DL
Sbjct: 121 DQSGALTIPCEVETFKYLLKCMENNLKDL 149

[Close]

BLAST of CmoCh17G013690.1 vs. TAIR 10
Match: AT5G20810.2 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 75.1 bits (183), Expect = 6.4e-14
Identity = 36/89 (40.45%), Postives = 54/89 (60.67%), Query Frame = 0


Query: 60  KDEDEEERWRSYGRTRRVAPEGCFTVYVGAERQRFVIPTEYANHPLFRSLLEEAEAEYGY 119
           K+ D +E            P+G   VYVG E +RF+IPT Y +H LF+ LLE+AE E+G+
Sbjct: 61  KNGDSDEETCQSPEPPHDVPKGNLAVYVGPELRRFIIPTSYLSHSLFKVLLEKAEEEFGF 120

Query: 120 NCQAPLSLPCDVESFYRVLMEMDDGAADL 149
           +    L++PC+VE+F  +L  M++   DL
Sbjct: 121 DQSGALTIPCEVETFKYLLKCMENNLKDL 149

[Close]

BLAST of CmoCh17G013690.1 vs. TAIR 10
Match: AT2G46690.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 72.4 bits (176), Expect = 4.2e-13
Identity = 33/76 (43.42%), Postives = 49/76 (64.47%), Query Frame = 0


Query: 79  PEGCFTVYVGA---ERQRFVIPTEYANHPLFRSLLEEAEAEYGYNCQAPLSLPCDVESFY 138
           P+GC  + VG+   E+QRF++P  Y NHPLF  LL+EAE EYG++ +  +++PC VE F 
Sbjct: 25  PKGCLAIKVGSQGEEQQRFIVPVLYFNHPLFMQLLKEAEDEYGFDQKGTITIPCHVEEF- 84

Query: 139 RVLMEMDDGAADLRRG 152
           R +  + DG   +  G
Sbjct: 85  RYVQALIDGERSVYNG 99

The following BLAST results are available for this feature:

BLAST of CmoCh17G013690.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZUZ3	5.8e-12	43.42	Auxin-responsive protein SAUR32 OS=Arabidopsis thaliana OX=3702 GN=SAUR32 PE=2 S...	[more]
Q9SGU2	2.2e-11	44.44	Auxin-responsive protein SAUR71 OS=Arabidopsis thaliana OX=3702 GN=SAUR71 PE=2 S...	[more]
Q9SL45	2.1e-09	30.51	Protein SMALL AUXIN UP-REGULATED RNA 10 OS=Arabidopsis thaliana OX=3702 GN=SAUR1...	[more]
O65695	3.5e-09	42.86	Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 S...	[more]
P33082	4.6e-09	47.54	Auxin-induced protein X15 OS=Glycine max OX=3847 PE=2 SV=1	[more]

BLAST of CmoCh17G013690.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GPI0	2.7e-97	99.43	uncharacterized protein LOC111456287 OS=Cucurbita moschata OX=3662 GN=LOC1114562...	[more]
A0A6J1KVV9	1.5e-79	84.66	auxin-responsive protein SAUR36-like OS=Cucurbita maxima OX=3661 GN=LOC111498073...	[more]
A0A6J1HAW5	4.1e-77	82.39	uncharacterized protein LOC111461130 OS=Cucurbita moschata OX=3662 GN=LOC1114611...	[more]
A0A0A0KC76	1.3e-75	85.80	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G092560 PE=3 SV=1	[more]
A0A1S4E3G0	2.5e-74	83.52	auxin-responsive protein SAUR36 OS=Cucumis melo OX=3656 GN=LOC103498869 PE=3 SV=...	[more]

BLAST of CmoCh17G013690.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022953882.1	5.7e-97	99.43	uncharacterized protein LOC111456287 [Cucurbita moschata]	[more]
KAG6576118.1	1.7e-96	98.86	Auxin-responsive protein SAUR32, partial [Cucurbita argyrosperma subsp. sororia]...	[more]
XP_023547520.1	3.7e-96	98.29	uncharacterized protein LOC111806437 [Cucurbita pepo subsp. pepo]	[more]
XP_023004895.1	3.1e-79	84.66	auxin-responsive protein SAUR36-like [Cucurbita maxima]	[more]
XP_022960394.1	8.5e-77	82.39	uncharacterized protein LOC111461130 [Cucurbita moschata]	[more]

BLAST of CmoCh17G013690.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G50760.1	4.3e-18	40.91	SAUR-like auxin-responsive protein family	[more]
AT3G61900.1	4.4e-15	41.90	SAUR-like auxin-responsive protein family	[more]
AT5G20810.1	6.4e-14	40.45	SAUR-like auxin-responsive protein family	[more]
AT5G20810.2	6.4e-14	40.45	SAUR-like auxin-responsive protein family	[more]
AT2G46690.1	4.2e-13	43.42	SAUR-like auxin-responsive protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 71..138 e-value: 2.8E-23 score: 81.9
None	No IPR available	PANTHER	PTHR31374:SF118	OS02G0305950 PROTEIN	coord: 10..146
None	No IPR available	PANTHER	PTHR31374	AUXIN-INDUCED PROTEIN-LIKE-RELATED	coord: 10..146

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmoCh17G013690	CmoCh17G013690	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh17G013690.1:exon:583	CmoCh17G013690.1:exon:583	exon
CmoCh17G013690.1:exon:582	CmoCh17G013690.1:exon:582	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh17G013690.1:cds	CmoCh17G013690.1:cds	CDS
CmoCh17G013690.1:cds	CmoCh17G013690.1:cds_2	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmoCh17G013690.1	CmoCh17G013690.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0016491	oxidoreductase activity