CmoCh17G012350.1 (mRNA) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh17G012350.1
Type	mRNA
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	RING-type domain-containing protein
Location	Cmo_Chr17: 9817905 .. 9819011 (-)
Sequence length	1107
RNA-Seq Expression	CmoCh17G012350.1
Synteny	CmoCh17G012350.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGGTGATCGGCGGAGGATTACGCTTTACGATCAGATGTTAGCGGTCGGCGATGGCAGAGAGTTCGCCCGTGGTTTGACACTCAACGACGTTTTGACCATTCATAACAGAGCTTCGCCGAGCCCTTCGCCGAGCCCTTCGCCGGCTGTGAGACTAAGCGGCCGGACTTTGCTCGATATTATAAGAGACGACGTTGGGATATCTCCTGTTGATAACCGAGAGAGGAAATCTTGGAAGTTTTTGAGAGATCGCCTTCGTTTGAATCTCAGATCTCAAATTCTGTCGCCGAATTCGCTTCGTATACCTAGTTTTTCGTCGGCGGAGATGATGCCAAACGAAGAAGAATCGTCGGAATCCACCACCACCACTGCTGCCGCCCCGTCTCTCCGGCAGATTTCACGGCGGAGCTCGTCGCGGTTAAGCCTGAACGCGAGGCCAAAGTCCGAGGCTGCAAATTCCGACGATTCTCCAGAAAACAACAATTCCTCCACCGCTTCCGGCTCCGGCAGTAGGCGGAGTCTCCAAAAGCCACAAATGTCGCGGCACAGCTCGACGAGATTCACCCTAGAACGGAGCGAGAGTTTCACGGACTTGTCTGATCCAGCGCGTGACGGCCCGCGCCGTCTCTCGGCTGCGCTTGCAATGGAGAGATCGATGTCAGCTAGAGAAACAGTGGTGGCTCAAGAAGCCGCCGACGCAGAAAGCACCGCCCACGAAGAAGAAGAACAAGAAGAAGAACAGGAACAACCAGAAGAACAAGAATCCAGCGCGGCGGCGCCGGTGAGGATGTCACTTATGGATCTGTTAGAGGAAACGGACAGGAAAATGGGGTTGGAAGGGTCAAGATACAGAATAGAAGAGGAAGAGGAAGAAGAGGAAGAGGAAGAAGAAGAAATTCATCATAAGGTCACAGCCAAACGCGGCGGAGGACACAGCTGGGGAGCAGAACGGCGTTGCTGCGTGTGCATGGTGCGTTATAAAGGGGCGGCATTTATCCCCTGTGGTCACACCTTTTGTAGGCTGTGTTCAAGAGAGCTTTGGGTGAGTAGAGGGAACTGTCCACTTTGCAATGGCTTTATTTTGGAGATTCTTGACATCTTCTGA

mRNA sequence

ATGGAAGGTGATCGGCGGAGGATTACGCTTTACGATCAGATGTTAGCGGTCGGCGATGGCAGAGAGTTCGCCCGTGGTTTGACACTCAACGACGTTTTGACCATTCATAACAGAGCTTCGCCGAGCCCTTCGCCGAGCCCTTCGCCGGCTGTGAGACTAAGCGGCCGGACTTTGCTCGATATTATAAGAGACGACGTTGGGATATCTCCTGTTGATAACCGAGAGAGGAAATCTTGGAAGTTTTTGAGAGATCGCCTTCGTTTGAATCTCAGATCTCAAATTCTGTCGCCGAATTCGCTTCGTATACCTAGTTTTTCGTCGGCGGAGATGATGCCAAACGAAGAAGAATCGTCGGAATCCACCACCACCACTGCTGCCGCCCCGTCTCTCCGGCAGATTTCACGGCGGAGCTCGTCGCGGTTAAGCCTGAACGCGAGGCCAAAGTCCGAGGCTGCAAATTCCGACGATTCTCCAGAAAACAACAATTCCTCCACCGCTTCCGGCTCCGGCAGTAGGCGGAGTCTCCAAAAGCCACAAATGTCGCGGCACAGCTCGACGAGATTCACCCTAGAACGGAGCGAGAGTTTCACGGACTTGTCTGATCCAGCGCGTGACGGCCCGCGCCGTCTCTCGGCTGCGCTTGCAATGGAGAGATCGATGTCAGCTAGAGAAACAGTGGTGGCTCAAGAAGCCGCCGACGCAGAAAGCACCGCCCACGAAGAAGAAGAACAAGAAGAAGAACAGGAACAACCAGAAGAACAAGAATCCAGCGCGGCGGCGCCGGTGAGGATGTCACTTATGGATCTGTTAGAGGAAACGGACAGGAAAATGGGGTTGGAAGGGTCAAGATACAGAATAGAAGAGGAAGAGGAAGAAGAGGAAGAGGAAGAAGAAGAAATTCATCATAAGGTCACAGCCAAACGCGGCGGAGGACACAGCTGGGGAGCAGAACGGCGTTGCTGCGTGTGCATGGTGCGTTATAAAGGGGCGGCATTTATCCCCTGTGGTCACACCTTTTGTAGGCTGTGTTCAAGAGAGCTTTGGGTGAGTAGAGGGAACTGTCCACTTTGCAATGGCTTTATTTTGGAGATTCTTGACATCTTCTGA

Coding sequence (CDS)

ATGGAAGGTGATCGGCGGAGGATTACGCTTTACGATCAGATGTTAGCGGTCGGCGATGGCAGAGAGTTCGCCCGTGGTTTGACACTCAACGACGTTTTGACCATTCATAACAGAGCTTCGCCGAGCCCTTCGCCGAGCCCTTCGCCGGCTGTGAGACTAAGCGGCCGGACTTTGCTCGATATTATAAGAGACGACGTTGGGATATCTCCTGTTGATAACCGAGAGAGGAAATCTTGGAAGTTTTTGAGAGATCGCCTTCGTTTGAATCTCAGATCTCAAATTCTGTCGCCGAATTCGCTTCGTATACCTAGTTTTTCGTCGGCGGAGATGATGCCAAACGAAGAAGAATCGTCGGAATCCACCACCACCACTGCTGCCGCCCCGTCTCTCCGGCAGATTTCACGGCGGAGCTCGTCGCGGTTAAGCCTGAACGCGAGGCCAAAGTCCGAGGCTGCAAATTCCGACGATTCTCCAGAAAACAACAATTCCTCCACCGCTTCCGGCTCCGGCAGTAGGCGGAGTCTCCAAAAGCCACAAATGTCGCGGCACAGCTCGACGAGATTCACCCTAGAACGGAGCGAGAGTTTCACGGACTTGTCTGATCCAGCGCGTGACGGCCCGCGCCGTCTCTCGGCTGCGCTTGCAATGGAGAGATCGATGTCAGCTAGAGAAACAGTGGTGGCTCAAGAAGCCGCCGACGCAGAAAGCACCGCCCACGAAGAAGAAGAACAAGAAGAAGAACAGGAACAACCAGAAGAACAAGAATCCAGCGCGGCGGCGCCGGTGAGGATGTCACTTATGGATCTGTTAGAGGAAACGGACAGGAAAATGGGGTTGGAAGGGTCAAGATACAGAATAGAAGAGGAAGAGGAAGAAGAGGAAGAGGAAGAAGAAGAAATTCATCATAAGGTCACAGCCAAACGCGGCGGAGGACACAGCTGGGGAGCAGAACGGCGTTGCTGCGTGTGCATGGTGCGTTATAAAGGGGCGGCATTTATCCCCTGTGGTCACACCTTTTGTAGGCTGTGTTCAAGAGAGCTTTGGGTGAGTAGAGGGAACTGTCCACTTTGCAATGGCTTTATTTTGGAGATTCTTGACATCTTCTGA

Protein sequence

MEGDRRRITLYDQMLAVGDGREFARGLTLNDVLTIHNRASPSPSPSPSPAVRLSGRTLLDIIRDDVGISPVDNRERKSWKFLRDRLRLNLRSQILSPNSLRIPSFSSAEMMPNEEESSESTTTTAAAPSLRQISRRSSSRLSLNARPKSEAANSDDSPENNNSSTASGSGSRRSLQKPQMSRHSSTRFTLERSESFTDLSDPARDGPRRLSAALAMERSMSARETVVAQEAADAESTAHEEEEQEEEQEQPEEQESSAAAPVRMSLMDLLEETDRKMGLEGSRYRIEEEEEEEEEEEEEIHHKVTAKRGGGHSWGAERRCCVCMVRYKGAAFIPCGHTFCRLCSRELWVSRGNCPLCNGFILEILDIF

Homology

[Close]

BLAST of CmoCh17G012350.1 vs. ExPASy TrEMBL
Match: A0A6J1GS53 (histone H3.v1-like OS=Cucurbita moschata OX=3662 GN=LOC111456507 PE=4 SV=1)

HSP 1 Score: 682.2 bits (1759), Expect = 1.2e-192
Identity = 368/368 (100.00%), Postives = 368/368 (100.00%), Query Frame = 0


Query: 1   MEGDRRRITLYDQMLAVGDGREFARGLTLNDVLTIHNRASPSPSPSPSPAVRLSGRTLLD 60
           MEGDRRRITLYDQMLAVGDGREFARGLTLNDVLTIHNRASPSPSPSPSPAVRLSGRTLLD
Sbjct: 1   MEGDRRRITLYDQMLAVGDGREFARGLTLNDVLTIHNRASPSPSPSPSPAVRLSGRTLLD 60

Query: 61  IIRDDVGISPVDNRERKSWKFLRDRLRLNLRSQILSPNSLRIPSFSSAEMMPNEEESSES 120
           IIRDDVGISPVDNRERKSWKFLRDRLRLNLRSQILSPNSLRIPSFSSAEMMPNEEESSES
Sbjct: 61  IIRDDVGISPVDNRERKSWKFLRDRLRLNLRSQILSPNSLRIPSFSSAEMMPNEEESSES 120

Query: 121 TTTTAAAPSLRQISRRSSSRLSLNARPKSEAANSDDSPENNNSSTASGSGSRRSLQKPQM 180
           TTTTAAAPSLRQISRRSSSRLSLNARPKSEAANSDDSPENNNSSTASGSGSRRSLQKPQM
Sbjct: 121 TTTTAAAPSLRQISRRSSSRLSLNARPKSEAANSDDSPENNNSSTASGSGSRRSLQKPQM 180

Query: 181 SRHSSTRFTLERSESFTDLSDPARDGPRRLSAALAMERSMSARETVVAQEAADAESTAHE 240
           SRHSSTRFTLERSESFTDLSDPARDGPRRLSAALAMERSMSARETVVAQEAADAESTAHE
Sbjct: 181 SRHSSTRFTLERSESFTDLSDPARDGPRRLSAALAMERSMSARETVVAQEAADAESTAHE 240

Query: 241 EEEQEEEQEQPEEQESSAAAPVRMSLMDLLEETDRKMGLEGSRYRIEEEEEEEEEEEEEI 300
           EEEQEEEQEQPEEQESSAAAPVRMSLMDLLEETDRKMGLEGSRYRIEEEEEEEEEEEEEI
Sbjct: 241 EEEQEEEQEQPEEQESSAAAPVRMSLMDLLEETDRKMGLEGSRYRIEEEEEEEEEEEEEI 300

Query: 301 HHKVTAKRGGGHSWGAERRCCVCMVRYKGAAFIPCGHTFCRLCSRELWVSRGNCPLCNGF 360
           HHKVTAKRGGGHSWGAERRCCVCMVRYKGAAFIPCGHTFCRLCSRELWVSRGNCPLCNGF
Sbjct: 301 HHKVTAKRGGGHSWGAERRCCVCMVRYKGAAFIPCGHTFCRLCSRELWVSRGNCPLCNGF 360

Query: 361 ILEILDIF 369
           ILEILDIF
Sbjct: 361 ILEILDIF 368

[Close]

BLAST of CmoCh17G012350.1 vs. ExPASy TrEMBL
Match: A0A6J1JVK9 (E3 ubiquitin-protein ligase RNF8-like OS=Cucurbita maxima OX=3661 GN=LOC111488241 PE=4 SV=1)

HSP 1 Score: 634.4 bits (1635), Expect = 2.9e-178
Identity = 350/368 (95.11%), Postives = 355/368 (96.47%), Query Frame = 0


Query: 1   MEGDRRRITLYDQMLAVGDGREFARGLTLNDVLTIHNRASPSPSPSPSPAVRLSGRTLLD 60
           MEGDRRRITLYDQMLAVGDGREFARGLTLNDVLTIHNRA    SPSPSPAVRL+GRTLLD
Sbjct: 1   MEGDRRRITLYDQMLAVGDGREFARGLTLNDVLTIHNRA----SPSPSPAVRLNGRTLLD 60

Query: 61  IIRDDVGISPVDNRERKSWKFLRDRLRLNLRSQILSPNSLRIPSFSSAEMMPNEEESSES 120
           IIRDDVGISPV NRERKSWKFLRDRLRLNLRSQILSPNSLRIPSFSSAEMMP+EE+SSES
Sbjct: 61  IIRDDVGISPVGNRERKSWKFLRDRLRLNLRSQILSPNSLRIPSFSSAEMMPSEEQSSES 120

Query: 121 TTTTAAAPSLRQISRRSSSRLSLNARPKSEAANSDDSPENNNSSTASGSGSRRSLQKPQM 180
           TTTT AAPSLRQISRRSSSRLSLNARPKSEAANS DSPENNNSSTASGSGSRRSLQKPQM
Sbjct: 121 TTTTGAAPSLRQISRRSSSRLSLNARPKSEAANSGDSPENNNSSTASGSGSRRSLQKPQM 180

Query: 181 SRHSSTRFTLERSESFTDLSDPARDGPRRLSAALAMERSMSARETVVAQEAADAESTAHE 240
           SRHSSTRFTLERSESFTDLSDPARDG RRLSAALAMERSMSARETVVAQEAADAESTAH 
Sbjct: 181 SRHSSTRFTLERSESFTDLSDPARDGARRLSAALAMERSMSARETVVAQEAADAESTAH- 240

Query: 241 EEEQEEEQEQPEEQESSAAAPVRMSLMDLLEETDRKMGLEGSRYRIEEEEEEEEEEEEEI 300
           EEEQEEEQEQPE+QESS+AAPVRMSLMDLLEETDRKMGLEGSRYRI   EEEEEEEEEEI
Sbjct: 241 EEEQEEEQEQPEQQESSSAAPVRMSLMDLLEETDRKMGLEGSRYRI---EEEEEEEEEEI 300

Query: 301 HHKVTAKRGGGHSWGAERRCCVCMVRYKGAAFIPCGHTFCRLCSRELWVSRGNCPLCNGF 360
           HHKVTAKRGG HSWGAERRCCVCMVRYKGAAFIPCGHTFCRLCSRELWVSRGNCPLCNGF
Sbjct: 301 HHKVTAKRGGEHSWGAERRCCVCMVRYKGAAFIPCGHTFCRLCSRELWVSRGNCPLCNGF 360

Query: 361 ILEILDIF 369
           ILEILDIF
Sbjct: 361 ILEILDIF 360

[Close]

BLAST of CmoCh17G012350.1 vs. ExPASy TrEMBL
Match: A0A5D3E4J3 (Nucleolin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold343G00730 PE=4 SV=1)

HSP 1 Score: 484.6 bits (1246), Expect = 3.7e-133
Identity = 281/370 (75.95%), Postives = 307/370 (82.97%), Query Frame = 0


Query: 1   MEGDRRRITLYDQMLAVGDGREFARGLTLNDVLTIHNRASPSPSPSPSPAVRLSGRTLLD 60
           MEG RRRITLYDQMLAV DGRE A G TLNDVLTI  RA    SPSPSPAVRL GRTLLD
Sbjct: 1   MEGGRRRITLYDQMLAVSDGRELASGFTLNDVLTIQKRA----SPSPSPAVRLHGRTLLD 60

Query: 61  IIRDDVGISPVDNRERKSWKFLRDRLRLNLRSQILSPNSLRIPSFSSAEMMPNEEESSES 120
           IIRDDVG SPV NRERKSWKFLRDRLRLNLRSQI  PNSLR P F+SAEMMPN+E+S E 
Sbjct: 61  IIRDDVGKSPVSNRERKSWKFLRDRLRLNLRSQIPPPNSLRFPGFTSAEMMPNDEQSPEP 120

Query: 121 TTTTA--AAPSLRQISRRSSSRLSLNARPKSEAANSDDSPENNNSSTASGSGSRRSLQKP 180
           TTT A  AAPSLRQISRR+S+R + +  P SEA NSD SP+NN+++ ASG G  RSL +P
Sbjct: 121 TTTAAVSAAPSLRQISRRNSTRFNPSVPPSSEATNSDASPDNNSAAAASGGGG-RSLLRP 180

Query: 181 QMSRHSSTRFTLERSESFTDLSDPARDGPRRLSAALAMERSMSARETVVAQEAADAESTA 240
           QMSRH+STRF++ERSESFTDL++PAR+G RRLSAALA ERSMSARE V AQEAADAE+ A
Sbjct: 181 QMSRHNSTRFSVERSESFTDLTEPAREGTRRLSAALAEERSMSAREAVAAQEAADAEAIA 240

Query: 241 HEEEEQEEEQEQPEEQESSAAAPVRMSLMDLLEETDRKMGLEGSRYRIEEEEEEEEEEEE 300
            + EEQEEEQE       S  AP+RMSLMDLLEETDR+MG EGS YRI E+EEEEEEEEE
Sbjct: 241 -DVEEQEEEQE-----AESTPAPMRMSLMDLLEETDRQMGFEGSTYRI-EDEEEEEEEEE 300

Query: 301 EIHHKVTAKRGGGHSWGAERRCCVCMVRYKGAAFIPCGHTFCRLCSRELWVSRGNCPLCN 360
           EI ++VT   GGG   G ER CCVCMVR+KGAAFIPCGHTFCRLCSRELWVSRGNCPLCN
Sbjct: 301 EIENEVTTVCGGGGGGGTERNCCVCMVRHKGAAFIPCGHTFCRLCSRELWVSRGNCPLCN 358

Query: 361 GFILEILDIF 369
           GFILEILDIF
Sbjct: 361 GFILEILDIF 358

[Close]

BLAST of CmoCh17G012350.1 vs. ExPASy TrEMBL
Match: A0A1S3C6E1 (nucleolin-like OS=Cucumis melo OX=3656 GN=LOC103497559 PE=4 SV=1)

HSP 1 Score: 483.8 bits (1244), Expect = 6.4e-133
Identity = 280/370 (75.68%), Postives = 308/370 (83.24%), Query Frame = 0


Query: 1   MEGDRRRITLYDQMLAVGDGREFARGLTLNDVLTIHNRASPSPSPSPSPAVRLSGRTLLD 60
           MEG RRRITLYDQMLAV DGRE A G TLNDVLTI  RA    SPSPSPAVRL GRTLLD
Sbjct: 1   MEGGRRRITLYDQMLAVSDGRELASGFTLNDVLTIQKRA----SPSPSPAVRLHGRTLLD 60

Query: 61  IIRDDVGISPVDNRERKSWKFLRDRLRLNLRSQILSPNSLRIPSFSSAEMMPNEEESSES 120
           IIRDDVG SPV NRERKSWKFLRDRLRLNLRSQI  PNSLR P F+SA+MMPN+E+S E 
Sbjct: 61  IIRDDVGKSPVSNRERKSWKFLRDRLRLNLRSQIPPPNSLRFPGFTSADMMPNDEQSPEP 120

Query: 121 TTTTA--AAPSLRQISRRSSSRLSLNARPKSEAANSDDSPENNNSSTASGSGSRRSLQKP 180
           TTT A  AAPSLRQISRR+S+R + +  P SEA NSD SP+NN+++ ASG+G  RSL +P
Sbjct: 121 TTTAAVSAAPSLRQISRRNSTRFNPSVPPSSEATNSDASPDNNSAAAASGAGG-RSLLRP 180

Query: 181 QMSRHSSTRFTLERSESFTDLSDPARDGPRRLSAALAMERSMSARETVVAQEAADAESTA 240
           QMSRH+STRF++ERSESFTDL++PAR+G RRLSAALA ERSMSARE V AQEAADAE+ A
Sbjct: 181 QMSRHNSTRFSVERSESFTDLTEPAREGTRRLSAALAEERSMSAREAVAAQEAADAEAIA 240

Query: 241 HEEEEQEEEQEQPEEQESSAAAPVRMSLMDLLEETDRKMGLEGSRYRIEEEEEEEEEEEE 300
            + EEQEEEQE       S  AP+RMSLMDLLEETDR+MG EGS YRI E+EEEEEEEEE
Sbjct: 241 -DVEEQEEEQE-----AESTPAPMRMSLMDLLEETDRQMGFEGSTYRI-EDEEEEEEEEE 300

Query: 301 EIHHKVTAKRGGGHSWGAERRCCVCMVRYKGAAFIPCGHTFCRLCSRELWVSRGNCPLCN 360
           EI ++VT   GGG   G ER CCVCMVR+KGAAFIPCGHTFCRLCSRELWVSRGNCPLCN
Sbjct: 301 EIENEVTTVCGGGGGGGTERNCCVCMVRHKGAAFIPCGHTFCRLCSRELWVSRGNCPLCN 358

Query: 361 GFILEILDIF 369
           GFILEILDIF
Sbjct: 361 GFILEILDIF 358

[Close]

BLAST of CmoCh17G012350.1 vs. ExPASy TrEMBL
Match: A0A0A0K6R9 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G342770 PE=4 SV=1)

HSP 1 Score: 449.5 bits (1155), Expect = 1.3e-122
Identity = 263/370 (71.08%), Postives = 294/370 (79.46%), Query Frame = 0


Query: 1   MEGDRRRITLYDQMLAVGDGREFARGLTLNDVLTIHNRASPSPSPSPSPAVRLSGRTLLD 60
           MEG RRRITLYDQMLAV DGR+ A G TLNDVL I  RA     PS SPAVRL GRTLLD
Sbjct: 1   MEGGRRRITLYDQMLAVSDGRDLAGGFTLNDVLAIQKRA----LPSSSPAVRLHGRTLLD 60

Query: 61  IIRDDVGISPVDNRERKSWKFLRDRLRLNLRSQILSPNSLRIPSFSSAEMMPNEEESSES 120
           IIRDDVG SPV NRER SWKF RDRLRL++RSQI   NSLR P  +SAEMM N+E S E 
Sbjct: 61  IIRDDVGKSPVSNRERTSWKFFRDRLRLSIRSQIPPSNSLRFPGLTSAEMMSNDEHSPEP 120

Query: 121 TTTTA--AAPSLRQISRRSSSRLSLNARPKSEAANSDDSPENNNSSTASGSGSRRSLQKP 180
           TTT A  AAPSLRQISRR+S+RL+ + +P SEA NS+ SP+NN+++ ASGSG  RSL +P
Sbjct: 121 TTTAAVSAAPSLRQISRRNSTRLNPSVQPSSEATNSNASPDNNSAAAASGSGG-RSLLRP 180

Query: 181 QMSRHSSTRFTLERSESFTDLSDPARDGPRRLSAALAMERSMSARETVVAQEAADAESTA 240
           QMSRH+STRF++ERSESFTDL++P R+G RRLSAALA ERSMSARE V AQEAADAE+T 
Sbjct: 181 QMSRHNSTRFSVERSESFTDLTEPTREGTRRLSAALAEERSMSAREAVTAQEAADAEATV 240

Query: 241 HEEEEQEEEQEQPEEQESSAAAPVRMSLMDLLEETDRKMGLEGSRYRIEEEEEEEEEEEE 300
            EEE+Q+E+  +      S  APVRMSLMDLLEETDR+MG EGS YRIE+E+EEEE E E
Sbjct: 241 DEEEQQQEQVAE------STPAPVRMSLMDLLEETDRQMGFEGSTYRIEDEDEEEEIENE 300

Query: 301 EIHHKVTAKRGGGHSWGAERRCCVCMVRYKGAAFIPCGHTFCRLCSRELWVSRGNCPLCN 360
                 T   GGG S G E  CCVCMVR+KGAAFIPCGHTFCRLCSRELWVSRGNCPLCN
Sbjct: 301 ----VSTTVCGGGGSGGTEPHCCVCMVRHKGAAFIPCGHTFCRLCSRELWVSRGNCPLCN 355

Query: 361 GFILEILDIF 369
           GFILEILDIF
Sbjct: 361 GFILEILDIF 355

[Close]

BLAST of CmoCh17G012350.1 vs. NCBI nr
Match: XP_022954164.1 (histone H3.v1-like [Cucurbita moschata])

HSP 1 Score: 682.2 bits (1759), Expect = 2.5e-192
Identity = 368/368 (100.00%), Postives = 368/368 (100.00%), Query Frame = 0


Query: 1   MEGDRRRITLYDQMLAVGDGREFARGLTLNDVLTIHNRASPSPSPSPSPAVRLSGRTLLD 60
           MEGDRRRITLYDQMLAVGDGREFARGLTLNDVLTIHNRASPSPSPSPSPAVRLSGRTLLD
Sbjct: 1   MEGDRRRITLYDQMLAVGDGREFARGLTLNDVLTIHNRASPSPSPSPSPAVRLSGRTLLD 60

Query: 61  IIRDDVGISPVDNRERKSWKFLRDRLRLNLRSQILSPNSLRIPSFSSAEMMPNEEESSES 120
           IIRDDVGISPVDNRERKSWKFLRDRLRLNLRSQILSPNSLRIPSFSSAEMMPNEEESSES
Sbjct: 61  IIRDDVGISPVDNRERKSWKFLRDRLRLNLRSQILSPNSLRIPSFSSAEMMPNEEESSES 120

Query: 121 TTTTAAAPSLRQISRRSSSRLSLNARPKSEAANSDDSPENNNSSTASGSGSRRSLQKPQM 180
           TTTTAAAPSLRQISRRSSSRLSLNARPKSEAANSDDSPENNNSSTASGSGSRRSLQKPQM
Sbjct: 121 TTTTAAAPSLRQISRRSSSRLSLNARPKSEAANSDDSPENNNSSTASGSGSRRSLQKPQM 180

Query: 181 SRHSSTRFTLERSESFTDLSDPARDGPRRLSAALAMERSMSARETVVAQEAADAESTAHE 240
           SRHSSTRFTLERSESFTDLSDPARDGPRRLSAALAMERSMSARETVVAQEAADAESTAHE
Sbjct: 181 SRHSSTRFTLERSESFTDLSDPARDGPRRLSAALAMERSMSARETVVAQEAADAESTAHE 240

Query: 241 EEEQEEEQEQPEEQESSAAAPVRMSLMDLLEETDRKMGLEGSRYRIEEEEEEEEEEEEEI 300
           EEEQEEEQEQPEEQESSAAAPVRMSLMDLLEETDRKMGLEGSRYRIEEEEEEEEEEEEEI
Sbjct: 241 EEEQEEEQEQPEEQESSAAAPVRMSLMDLLEETDRKMGLEGSRYRIEEEEEEEEEEEEEI 300

Query: 301 HHKVTAKRGGGHSWGAERRCCVCMVRYKGAAFIPCGHTFCRLCSRELWVSRGNCPLCNGF 360
           HHKVTAKRGGGHSWGAERRCCVCMVRYKGAAFIPCGHTFCRLCSRELWVSRGNCPLCNGF
Sbjct: 301 HHKVTAKRGGGHSWGAERRCCVCMVRYKGAAFIPCGHTFCRLCSRELWVSRGNCPLCNGF 360

Query: 361 ILEILDIF 369
           ILEILDIF
Sbjct: 361 ILEILDIF 368

[Close]

BLAST of CmoCh17G012350.1 vs. NCBI nr
Match: KAG6575985.1 (hypothetical protein SDJN03_26624, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 660.2 bits (1702), Expect = 1.0e-185
Identity = 362/369 (98.10%), Postives = 363/369 (98.37%), Query Frame = 0


Query: 1   MEGDRRRITLYDQMLAVGDGREFARGLTLNDVLTIHNRASPSPSPSPSPAVRLSGRTLLD 60
           MEGDRRRITLYDQMLAVGDGREFARGLTLNDVLTIHNRA    SPSPSPAVRL+GRTLLD
Sbjct: 1   MEGDRRRITLYDQMLAVGDGREFARGLTLNDVLTIHNRA----SPSPSPAVRLNGRTLLD 60

Query: 61  IIRDDVGISPVDNRERKSWKFLRDRLRLNLRSQILSPNSLRIPSFSSAEMMPNEEESSES 120
           IIRDDVGISPVDNRERKSWKFLRDRLRLNLRSQILSPNSLRIPSFSSAEMMPNEEESSES
Sbjct: 61  IIRDDVGISPVDNRERKSWKFLRDRLRLNLRSQILSPNSLRIPSFSSAEMMPNEEESSES 120

Query: 121 TTTTAAAPSLRQISRRSSSRLSLNARPKSEAANSDDSPENNNSSTASGSGSRRSLQKPQM 180
           TTTTAAAPSLRQISRRSSSRLSLNARPKSEAANSDDSPENNNSSTASGSGSRRSLQKPQM
Sbjct: 121 TTTTAAAPSLRQISRRSSSRLSLNARPKSEAANSDDSPENNNSSTASGSGSRRSLQKPQM 180

Query: 181 SRHSSTRFTLERSESFTDLSDPARDGPRRLSAALAMERSMSARETVVAQEAADAESTAHE 240
           SRHSSTRFTLERSESFTDLSDPARDGPRRLSAALAMERSMSARETVVAQEAADAE TAHE
Sbjct: 181 SRHSSTRFTLERSESFTDLSDPARDGPRRLSAALAMERSMSARETVVAQEAADAEITAHE 240

Query: 241 EEEQEEEQEQPEEQESSAAAPVRMSLMDLLEETDRKMGLEGSRYRI-EEEEEEEEEEEEE 300
           EEEQEEEQEQPEEQESSAAAPVRMSLMDLLEETDRKMGLEGSRYRI EEEEEEEEEEEEE
Sbjct: 241 EEEQEEEQEQPEEQESSAAAPVRMSLMDLLEETDRKMGLEGSRYRIEEEEEEEEEEEEEE 300

Query: 301 IHHKVTAKRGGGHSWGAERRCCVCMVRYKGAAFIPCGHTFCRLCSRELWVSRGNCPLCNG 360
           IHHKVTAKRGGGHSWGAERRCCVCMVRYKGAAFIPCGHTFCRLCSRELWVSRGNCPLCNG
Sbjct: 301 IHHKVTAKRGGGHSWGAERRCCVCMVRYKGAAFIPCGHTFCRLCSRELWVSRGNCPLCNG 360

Query: 361 FILEILDIF 369
           FILEILDIF
Sbjct: 361 FILEILDIF 365

[Close]

BLAST of CmoCh17G012350.1 vs. NCBI nr
Match: KAG7014509.1 (hypothetical protein SDJN02_24687, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 656.0 bits (1691), Expect = 1.9e-184
Identity = 360/371 (97.04%), Postives = 362/371 (97.57%), Query Frame = 0


Query: 1   MEGDRRRITLYDQMLAVGDGREFARGLTLNDVLTIHNRASPSPSPSPSPAVRLSGRTLLD 60
           MEGDRRRITLYDQMLAVGDGREFARGLTLNDVLTIHNRA    SPSPSPAVRL+GRTLLD
Sbjct: 1   MEGDRRRITLYDQMLAVGDGREFARGLTLNDVLTIHNRA----SPSPSPAVRLNGRTLLD 60

Query: 61  IIRDDVGISPVDNRERKSWKFLRDRLRLNLRSQILSPNSLRIPSFSSAEMMPNEEESSES 120
           IIRDDVGISPVDNRERKSWKFLRDRLRLNLRSQILSPNSLRIPSFSSA+MMPNEEESSES
Sbjct: 61  IIRDDVGISPVDNRERKSWKFLRDRLRLNLRSQILSPNSLRIPSFSSADMMPNEEESSES 120

Query: 121 TTTTAAAPSLRQISRRSSSRLSLNARPKSEAANSDDSPENNNSSTASGSGSRRSLQKPQM 180
           TTTTAAAPSLRQISRRSSSRLSLNARPKSEAANSDDSPEN NSSTASGSGSRRSLQKPQM
Sbjct: 121 TTTTAAAPSLRQISRRSSSRLSLNARPKSEAANSDDSPENKNSSTASGSGSRRSLQKPQM 180

Query: 181 SRHSSTRFTLERSESFTDLSDPARDGPRRLSAALAMERSMSARETVVAQEAADAESTAHE 240
           SRHSSTRFTLERSESFTDLSDPARDGPRRLSAALAMERSMSARETVVAQEAADAE TAHE
Sbjct: 181 SRHSSTRFTLERSESFTDLSDPARDGPRRLSAALAMERSMSARETVVAQEAADAEITAHE 240

Query: 241 EEEQEEEQEQPEEQESSAAAPVRMSLMDLLEETDRKMGLEGSRYRI---EEEEEEEEEEE 300
           EEEQEEEQEQPEEQESSAAAPVRMSLMDLLEETDRKMGLEGSRYRI   EEEEEEEEEEE
Sbjct: 241 EEEQEEEQEQPEEQESSAAAPVRMSLMDLLEETDRKMGLEGSRYRIEEEEEEEEEEEEEE 300

Query: 301 EEIHHKVTAKRGGGHSWGAERRCCVCMVRYKGAAFIPCGHTFCRLCSRELWVSRGNCPLC 360
           EEIHHKVTAKRGGGHSWGAERRCCVCMVRYKGAAFIPCGHTFCRLCSRELWVSRGNCPLC
Sbjct: 301 EEIHHKVTAKRGGGHSWGAERRCCVCMVRYKGAAFIPCGHTFCRLCSRELWVSRGNCPLC 360

Query: 361 NGFILEILDIF 369
           NGFILEILDIF
Sbjct: 361 NGFILEILDIF 367

[Close]

BLAST of CmoCh17G012350.1 vs. NCBI nr
Match: XP_022991704.1 (E3 ubiquitin-protein ligase RNF8-like [Cucurbita maxima])

HSP 1 Score: 634.4 bits (1635), Expect = 6.0e-178
Identity = 350/368 (95.11%), Postives = 355/368 (96.47%), Query Frame = 0


Query: 1   MEGDRRRITLYDQMLAVGDGREFARGLTLNDVLTIHNRASPSPSPSPSPAVRLSGRTLLD 60
           MEGDRRRITLYDQMLAVGDGREFARGLTLNDVLTIHNRA    SPSPSPAVRL+GRTLLD
Sbjct: 1   MEGDRRRITLYDQMLAVGDGREFARGLTLNDVLTIHNRA----SPSPSPAVRLNGRTLLD 60

Query: 61  IIRDDVGISPVDNRERKSWKFLRDRLRLNLRSQILSPNSLRIPSFSSAEMMPNEEESSES 120
           IIRDDVGISPV NRERKSWKFLRDRLRLNLRSQILSPNSLRIPSFSSAEMMP+EE+SSES
Sbjct: 61  IIRDDVGISPVGNRERKSWKFLRDRLRLNLRSQILSPNSLRIPSFSSAEMMPSEEQSSES 120

Query: 121 TTTTAAAPSLRQISRRSSSRLSLNARPKSEAANSDDSPENNNSSTASGSGSRRSLQKPQM 180
           TTTT AAPSLRQISRRSSSRLSLNARPKSEAANS DSPENNNSSTASGSGSRRSLQKPQM
Sbjct: 121 TTTTGAAPSLRQISRRSSSRLSLNARPKSEAANSGDSPENNNSSTASGSGSRRSLQKPQM 180

Query: 181 SRHSSTRFTLERSESFTDLSDPARDGPRRLSAALAMERSMSARETVVAQEAADAESTAHE 240
           SRHSSTRFTLERSESFTDLSDPARDG RRLSAALAMERSMSARETVVAQEAADAESTAH 
Sbjct: 181 SRHSSTRFTLERSESFTDLSDPARDGARRLSAALAMERSMSARETVVAQEAADAESTAH- 240

Query: 241 EEEQEEEQEQPEEQESSAAAPVRMSLMDLLEETDRKMGLEGSRYRIEEEEEEEEEEEEEI 300
           EEEQEEEQEQPE+QESS+AAPVRMSLMDLLEETDRKMGLEGSRYRI   EEEEEEEEEEI
Sbjct: 241 EEEQEEEQEQPEQQESSSAAPVRMSLMDLLEETDRKMGLEGSRYRI---EEEEEEEEEEI 300

Query: 301 HHKVTAKRGGGHSWGAERRCCVCMVRYKGAAFIPCGHTFCRLCSRELWVSRGNCPLCNGF 360
           HHKVTAKRGG HSWGAERRCCVCMVRYKGAAFIPCGHTFCRLCSRELWVSRGNCPLCNGF
Sbjct: 301 HHKVTAKRGGEHSWGAERRCCVCMVRYKGAAFIPCGHTFCRLCSRELWVSRGNCPLCNGF 360

Query: 361 ILEILDIF 369
           ILEILDIF
Sbjct: 361 ILEILDIF 360

[Close]

BLAST of CmoCh17G012350.1 vs. NCBI nr
Match: KAA0026218.1 (nucleolin-like [Cucumis melo var. makuwa] >TYK30738.1 nucleolin-like [Cucumis melo var. makuwa])

HSP 1 Score: 484.6 bits (1246), Expect = 7.7e-133
Identity = 281/370 (75.95%), Postives = 307/370 (82.97%), Query Frame = 0


Query: 1   MEGDRRRITLYDQMLAVGDGREFARGLTLNDVLTIHNRASPSPSPSPSPAVRLSGRTLLD 60
           MEG RRRITLYDQMLAV DGRE A G TLNDVLTI  RA    SPSPSPAVRL GRTLLD
Sbjct: 1   MEGGRRRITLYDQMLAVSDGRELASGFTLNDVLTIQKRA----SPSPSPAVRLHGRTLLD 60

Query: 61  IIRDDVGISPVDNRERKSWKFLRDRLRLNLRSQILSPNSLRIPSFSSAEMMPNEEESSES 120
           IIRDDVG SPV NRERKSWKFLRDRLRLNLRSQI  PNSLR P F+SAEMMPN+E+S E 
Sbjct: 61  IIRDDVGKSPVSNRERKSWKFLRDRLRLNLRSQIPPPNSLRFPGFTSAEMMPNDEQSPEP 120

Query: 121 TTTTA--AAPSLRQISRRSSSRLSLNARPKSEAANSDDSPENNNSSTASGSGSRRSLQKP 180
           TTT A  AAPSLRQISRR+S+R + +  P SEA NSD SP+NN+++ ASG G  RSL +P
Sbjct: 121 TTTAAVSAAPSLRQISRRNSTRFNPSVPPSSEATNSDASPDNNSAAAASGGGG-RSLLRP 180

Query: 181 QMSRHSSTRFTLERSESFTDLSDPARDGPRRLSAALAMERSMSARETVVAQEAADAESTA 240
           QMSRH+STRF++ERSESFTDL++PAR+G RRLSAALA ERSMSARE V AQEAADAE+ A
Sbjct: 181 QMSRHNSTRFSVERSESFTDLTEPAREGTRRLSAALAEERSMSAREAVAAQEAADAEAIA 240

Query: 241 HEEEEQEEEQEQPEEQESSAAAPVRMSLMDLLEETDRKMGLEGSRYRIEEEEEEEEEEEE 300
            + EEQEEEQE       S  AP+RMSLMDLLEETDR+MG EGS YRI E+EEEEEEEEE
Sbjct: 241 -DVEEQEEEQE-----AESTPAPMRMSLMDLLEETDRQMGFEGSTYRI-EDEEEEEEEEE 300

Query: 301 EIHHKVTAKRGGGHSWGAERRCCVCMVRYKGAAFIPCGHTFCRLCSRELWVSRGNCPLCN 360
           EI ++VT   GGG   G ER CCVCMVR+KGAAFIPCGHTFCRLCSRELWVSRGNCPLCN
Sbjct: 301 EIENEVTTVCGGGGGGGTERNCCVCMVRHKGAAFIPCGHTFCRLCSRELWVSRGNCPLCN 358

Query: 361 GFILEILDIF 369
           GFILEILDIF
Sbjct: 361 GFILEILDIF 358

[Close]

BLAST of CmoCh17G012350.1 vs. TAIR 10
Match: AT3G07120.1 (RING/U-box superfamily protein )

HSP 1 Score: 171.0 bits (432), Expect = 1.8e-42
Identity = 138/365 (37.81%), Postives = 209/365 (57.26%), Query Frame = 0


Query: 26  GLTLNDVL----TIHNRASPSPSPSPSPAV---RLSGRTLLDIIRDDVGISPVDNRERKS 85
           GL+L+ VL     I   + PSP P PS ++   R + +TL DIIR++   +   +++R +
Sbjct: 13  GLSLDAVLGGEILIEPPSLPSPPPLPSKSLVPHRPTSQTLFDIIREE--YAKEGHKDRTT 72

Query: 86  WKFLRDRLRLNLRSQILSPNSLRIPSFSSAEMMPNEEESSESTTTTAAAPSLRQISRR-- 145
           W+  R++LRL  R+     +SL IP  +S  ++PN +    +  + +A  ++R +     
Sbjct: 73  WQIFREKLRLK-RTGSAWTSSLHIP--ASDILIPNPKHIGTAFRSHSAGLNIRDLVHAIP 132

Query: 146 -----SSSRLSLNARPKSEAANSDDSPENNNSSTASGSGSRRSLQKPQMSRHSSTRFTLE 205
                 SS  ++  R  S    S  +P+++   +    G      KPQ+SRH S R   E
Sbjct: 133 MSDPPGSSGRAMFTRGSSMRVGSSKNPDDSPDISVLEDGPPSRSFKPQLSRHDSVRDHSE 192

Query: 206 RSESFTDLSDPARDGPRRLSAALAMERSMSARETVVAQEAADAESTA------HEEEEQE 265
             E+         +  R        ER MSARE V AQEAA+AE+ A       +++++E
Sbjct: 193 GEEN---------NRRRHPIVTFVEERQMSAREAVAAQEAAEAEAAAAGGSEDEDDDDEE 252

Query: 266 EEQEQPEEQESSAAAPVR--MSLMDLLEETDRKMGLEGSRYRIEEEEEEEEEEEEEIHHK 325
           ++  + EE +SS+A+  +  MSLMDLLEETDR+MGL GSRY ++E+EE EE+EE+E + +
Sbjct: 253 DDSGETEEMKSSSASEPKQTMSLMDLLEETDRQMGLTGSRYAMDEDEEYEEDEEDENNEE 312

Query: 326 VTAKRGGGHSWGAERRCCVCMVRYKGAAFIPCGHTFCRLCSRELWVSRGNCPLCNGFILE 369
                GGG     E  CCVCMV+ KGA+F PCGHTFC+LCS+EL   +G+CP+C+ F+LE
Sbjct: 313 EGDSHGGGE---GELSCCVCMVKIKGASFTPCGHTFCKLCSKELMAQKGHCPVCSSFVLE 360

[Close]

BLAST of CmoCh17G012350.1 vs. TAIR 10
Match: AT3G25030.1 (RING/U-box superfamily protein )

HSP 1 Score: 108.6 bits (270), Expect = 1.1e-23
Identity = 107/277 (38.63%), Postives = 131/277 (47.29%), Query Frame = 0


Query: 93  QILSPNSLRIPSFSS-AEMMPNEEESSESTTTTAAAPSLRQISRRSSSRLSLNARPKSEA 152
           QILSP   R  S  S  E+M  E   S   T   +     ++ R  S  +S N+ P    
Sbjct: 44  QILSPPPSRSQSNRSLVEVMQREHRHSRDKTAWKSLREKLRLKRNGSVWISSNSIP---- 103

Query: 153 ANSDDSPENNNSSTASGSGSRRSLQKPQMSRHSSTRFTLERSESFTDLSDPARDGPRRLS 212
             S D+P  N  + +   G                 F L  S + T+ +    +G  RL 
Sbjct: 104 --SLDTPIPNRDNVSHQLG-----------------FLLSNSGNVTEEASSV-EGRIRLG 163

Query: 213 AALAMERSMSARETVVAQEAADAESTAHEEEEQEEEQEQPEEQESSAAAPVRMSLMDLLE 272
           A LA ER++SAR                       E+E P E+E     P RMSLM+LLE
Sbjct: 164 AVLAEERALSAR-----------------------EEETPAERE---VEPARMSLMELLE 223

Query: 273 ETDRKMGLEGSRYRIEEEEEEEEEEEEEIHHKVTAKRGGGHSWGAERRCCVCMVRYKGAA 332
           E + +M    S   ++ E EEE          VTA         AE  CCVCMVR KGAA
Sbjct: 224 ENEGQM----SFVSVDGEAEEEVA-------AVTA---------AEISCCVCMVRSKGAA 250

Query: 333 FIPCGHTFCRLCSRELWVSRGNCPLCNGFILEILDIF 369
           FIPCGHTFCRLCSRELWV RGNCPLCN  ILE+LD+F
Sbjct: 284 FIPCGHTFCRLCSRELWVQRGNCPLCNTTILEVLDLF 250

[Close]

BLAST of CmoCh17G012350.1 vs. TAIR 10
Match: AT3G25030.2 (RING/U-box superfamily protein )

HSP 1 Score: 108.6 bits (270), Expect = 1.1e-23
Identity = 107/277 (38.63%), Postives = 131/277 (47.29%), Query Frame = 0


Query: 93  QILSPNSLRIPSFSS-AEMMPNEEESSESTTTTAAAPSLRQISRRSSSRLSLNARPKSEA 152
           QILSP   R  S  S  E+M  E   S   T   +     ++ R  S  +S N+ P    
Sbjct: 44  QILSPPPSRSQSNRSLVEVMQREHRHSRDKTAWKSLREKLRLKRNGSVWISSNSIP---- 103

Query: 153 ANSDDSPENNNSSTASGSGSRRSLQKPQMSRHSSTRFTLERSESFTDLSDPARDGPRRLS 212
             S D+P  N  + +   G                 F L  S + T+ +    +G  RL 
Sbjct: 104 --SLDTPIPNRDNVSHQLG-----------------FLLSNSGNVTEEASSV-EGRIRLG 163

Query: 213 AALAMERSMSARETVVAQEAADAESTAHEEEEQEEEQEQPEEQESSAAAPVRMSLMDLLE 272
           A LA ER++SAR                       E+E P E+E     P RMSLM+LLE
Sbjct: 164 AVLAEERALSAR-----------------------EEETPAERE---VEPARMSLMELLE 223

Query: 273 ETDRKMGLEGSRYRIEEEEEEEEEEEEEIHHKVTAKRGGGHSWGAERRCCVCMVRYKGAA 332
           E + +M    S   ++ E EEE          VTA         AE  CCVCMVR KGAA
Sbjct: 224 ENEGQM----SFVSVDGEAEEEVA-------AVTA---------AEISCCVCMVRSKGAA 250

Query: 333 FIPCGHTFCRLCSRELWVSRGNCPLCNGFILEILDIF 369
           FIPCGHTFCRLCSRELWV RGNCPLCN  ILE+LD+F
Sbjct: 284 FIPCGHTFCRLCSRELWVQRGNCPLCNTTILEVLDLF 250

[Close]

BLAST of CmoCh17G012350.1 vs. TAIR 10
Match: AT4G13100.2 (RING/U-box superfamily protein )

HSP 1 Score: 101.3 bits (251), Expect = 1.7e-21
Identity = 68/137 (49.64%), Postives = 81/137 (59.12%), Query Frame = 0


Query: 236 STAHEEEEQEEEQEQPEEQESSAAAPVRMSLMDLLEETDRKMGLEGSRYRIEEEEEEEEE 295
           S A EE  + E + +     ++   P RMSLM+LLE+ D      G  Y +   +E E E
Sbjct: 142 SDAAEEAAEREGRLRLGTVLAAEREPPRMSLMELLEDND------GHMYELSARDEVEVE 201

Query: 296 EEEEIHHKVTAKRGGGH----SWGAERRCCVCMVRYKGAAFIPCGHTFCRLCSRELWVSR 355
             +          GGG     +  AE  CCVCMVR KGAAFIPCGHTFCRLCSRELWV R
Sbjct: 202 GRDGCD-------GGGEAVAVTGAAELGCCVCMVRSKGAAFIPCGHTFCRLCSRELWVQR 261

Query: 356 GNCPLCNGFILEILDIF 369
           GNCPLCN  IL++LDIF
Sbjct: 262 GNCPLCNTAILQVLDIF 265

[Close]

BLAST of CmoCh17G012350.1 vs. TAIR 10
Match: AT4G13100.1 (RING/U-box superfamily protein )

HSP 1 Score: 82.4 bits (202), Expect = 8.2e-16
Identity = 103/293 (35.15%), Postives = 138/293 (47.10%), Query Frame = 0


Query: 84  DRLRLNLRSQILSPNSLRIPSFSSAEMMPNEEESSESTTTTAAAPSLRQISRRSSSRLSL 143
           DRLR+ L  ++ +  + R  S +  +++  E  S  S TT    P+    +  SSS L +
Sbjct: 8   DRLRVTLLDRMSTVENGR-SSVTLEDILMAETSSFRSLTT----PTTPVRNHSSSSLLDV 67

Query: 144 NARPKSEAANSDDSPENNNSSTASGSGSRRSLQKPQMSRHSSTRFTLERSESFTDLSDPA 203
             R +     +  S  +      + +G   S   P +  H  T               P 
Sbjct: 68  MRRERRRDKTAWKSLRDKLRLKRTATGWISSNPIPTLDNHILT---------------PD 127

Query: 204 RDGPR--RLSAALA-MERSMSARE-TVVAQEAADAESTAHEEEEQEEEQEQPEEQESSAA 263
            D  R  RL   L   E + S+R+ +  A+EAA+ E           E+E+ +       
Sbjct: 128 NDSHRFNRLGFLLTNSETNRSSRDVSDAAEEAAEREGRLRLGTVLAAEREEMQ------- 187

Query: 264 APVRMSLMDLLEETDRKMGLEGSRYRIEEEEEEEEEEEEEIHHKVTAKRGGGH----SWG 323
            P RMSLM+LLE+ D      G  Y +   +E E E  +          GGG     +  
Sbjct: 188 -PPRMSLMELLEDND------GHMYELSARDEVEVEGRDGCD-------GGGEAVAVTGA 247

Query: 324 AERRCCVCMVRYKGAAFIPCGHTFCRLCSRELWVSRGNCPLCNGFILEILDIF 369
           AE  CCVCMVR KGAAFIPCGHTFCRLCSRELWV RGNCPLCN  IL++LDIF
Sbjct: 248 AELGCCVCMVRSKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNTAILQVLDIF 259

The following BLAST results are available for this feature:

BLAST of CmoCh17G012350.1 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh17G012350.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GS53	1.2e-192	100.00	histone H3.v1-like OS=Cucurbita moschata OX=3662 GN=LOC111456507 PE=4 SV=1	[more]
A0A6J1JVK9	2.9e-178	95.11	E3 ubiquitin-protein ligase RNF8-like OS=Cucurbita maxima OX=3661 GN=LOC11148824...	[more]
A0A5D3E4J3	3.7e-133	75.95	Nucleolin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold343G00730...	[more]
A0A1S3C6E1	6.4e-133	75.68	nucleolin-like OS=Cucumis melo OX=3656 GN=LOC103497559 PE=4 SV=1	[more]
A0A0A0K6R9	1.3e-122	71.08	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G342770 P...	[more]

BLAST of CmoCh17G012350.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022954164.1	2.5e-192	100.00	histone H3.v1-like [Cucurbita moschata]	[more]
KAG6575985.1	1.0e-185	98.10	hypothetical protein SDJN03_26624, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7014509.1	1.9e-184	97.04	hypothetical protein SDJN02_24687, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022991704.1	6.0e-178	95.11	E3 ubiquitin-protein ligase RNF8-like [Cucurbita maxima]	[more]
KAA0026218.1	7.7e-133	75.95	nucleolin-like [Cucumis melo var. makuwa] >TYK30738.1 nucleolin-like [Cucumis me...	[more]

BLAST of CmoCh17G012350.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G07120.1	1.8e-42	37.81	RING/U-box superfamily protein	[more]
AT3G25030.1	1.1e-23	38.63	RING/U-box superfamily protein	[more]
AT3G25030.2	1.1e-23	38.63	RING/U-box superfamily protein	[more]
AT4G13100.2	1.7e-21	49.64	RING/U-box superfamily protein	[more]
AT4G13100.1	8.2e-16	35.15	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 279..306
None	No IPR available	COILS	Coil	Coil	coord: 229..249
None	No IPR available	PFAM	PF13920	zf-C3HC4_3	coord: 317..361 e-value: 4.1E-10 score: 39.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 221..261
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 236..253
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 104..196
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 104..206
None	No IPR available	PANTHER	PTHR46629	OS01G0917900 PROTEIN	coord: 3..368
None	No IPR available	PANTHER	PTHR46629:SF13	OS01G0917900 PROTEIN	coord: 3..368
None	No IPR available	CDD	cd16449	RING-HC	coord: 320..357 e-value: 2.35121E-11 score: 55.9365
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 319..364
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 320..357 e-value: 2.8E-5 score: 33.5
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 320..358 score: 11.132002
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 278..364 e-value: 2.9E-12 score: 48.1

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmoCh17G012350	CmoCh17G012350	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh17G012350.1:exon:910	CmoCh17G012350.1:exon:910	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh17G012350.1:cds	CmoCh17G012350.1:cds	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmoCh17G012350.1	CmoCh17G012350.1-protein	polypeptide