CmoCh15G014210.1 (mRNA) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh15G014210.1
TypemRNA
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
LocationCmo_Chr15: 9681704 .. 9683389 (-)
Sequence length222
RNA-Seq ExpressionCmoCh15G014210.1
SyntenyCmoCh15G014210.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGTTGTAAAGGTTGAATGCCTAATAAGAAAATTGGGCATTGGATTATCTTATAATAATAATATTATTTAAAAATAATATTAATTATATTTAAGTTAATAGTTACTGCTTTATTTATTTTATTTGTCCAGTAATTAAATAACCTAAAATTAATTAATTAATTAATTGTTAATAAAATATTTTAATAAATTACCTAAAAAAAAAAATGCTCCGAAAAGAATTGACCAAACGAACATCTTTTAACACTCAGTTTTGTACTCAATGATTATGATTTATAATAATACAGACAATTCCCGAGGTTTAACTAAATTAGAAAATAAATTAAATATGCATATGATAGATATATGTGGAGGCCGGAATGGCTCGAGATTGAGCTCGTCTCAACTTTCGACATTTTTTTAAATATATCAAATGTATCAACGAACATCAATGAGTATAAAATTATAGATCTACGAGTGTTCGTATAATTGAAACGTCGACATTTGCATGATATTAGATTAGCCAAAACCGCTTATGTCGATACCCATAGTTTCGAGTGGTTTAAATTTTGTGGGTACTGAGAGTCGCTTTCTTGTGGTCTATTCTCAACTTGACTTCTAAAACCAAAACCCTCGCAAGTTGCATGACATAGACATTGTCCCCCAAACAATAATATCCTTTTCATTTCTCTTCTTTTTCTTCCTCTTTTGTCCCTTTTGATTTTTTTTTCTTTTTATGGGATTATTTAAAATATCATTTTTGTTCCTAATTTTTGTATATTAAATTGTTATCGTATCAATTCTAGTCGTTTACTTAAATGGGTAGTTTAGTCATCTTTATATATTTTATCTAATAAGTCCCTAAACTTTCGATTTCTGTCATGTCCTAATTGGGGAGAAGAACATAACACTGTTTATAAGGGGAAGTTCGAAAGAAAAAATCCAAAGAGGATAATATATGCTAGCGGTGGATTTGGGTTGTTACAAATGGTATTAGAATGAAACATCGGATGATGTGGTAGCCTTCTCGCTGTTTCCTGAAGGGGGTAGACACGAGGCGGTGTGCCAGTACGGACGTTGGGCCCCAAAAGGAGTGGATTTAGAGGGGGTCCCAAATCGATTGGAGAAAGAAACGAATGGCAGCGAGGACACTGGACTCCAAAGAGGGGTGGATTGTGATGTCCCACGTTGGTTGGGGAGGAGAACAAAACACCCTTTATAAGAGTGTAGAAACCTACGCGTTTTAAAGCCTTGAGGGGAAACTCGAGTCTGATGTCCCACATTGGTTGGGGAGGGGAACAAACCGCCATTTATAAAAGTGTGGAAACTTCTCTTAGCAGACACGTTTTAAAGCCTTGAGGGGAAACCCGAAAGAGAAAGCCCAAAGAGGACAATATCTGCTAGCGGTGGATCTGGGCCGTTACACCGGGAAAGCCCAAAGACGACAGTTAGATATTTTCATCGTTAAATCAAAAAACGCTATTCAACGACCATATTGAAAAACGCTATTTAAATATATCTTCAACTAAATTCGGTAGGTGTCTTTATTGAGGTATATTTTGGATAATTAAGCAAACTTAATTATACGATGGGACTAGATTGACCTTTTCGGGAGACATAGGCCCCATAAAAAGTAAATACTACGTCAAATCAAATCATATAATTCATGGTTATCATAAAAATATCGATGAGAATGTGAATTTCTAA

mRNA sequence

ATGTGTTGTAAAGTTTTGTACTCAATGATTATGATTTATAATAATACAGACAATTCCCGAGCCAAAACCGCTTATGTCGATACCCATAGTTTCGAGTGGTTTAAATTTTGTGGATTGACCTTTTCGGGAGACATAGGCCCCATAAAAAGTAAATACTACGTCAAATCAAATCATATAATTCATGGTTATCATAAAAATATCGATGAGAATGTGAATTTCTAA

Coding sequence (CDS)

ATGTGTTGTAAAGTTTTGTACTCAATGATTATGATTTATAATAATACAGACAATTCCCGAGCCAAAACCGCTTATGTCGATACCCATAGTTTCGAGTGGTTTAAATTTTGTGGATTGACCTTTTCGGGAGACATAGGCCCCATAAAAAGTAAATACTACGTCAAATCAAATCATATAATTCATGGTTATCATAAAAATATCGATGAGAATGTGAATTTCTAA

Protein sequence

MCCKVLYSMIMIYNNTDNSRAKTAYVDTHSFEWFKFCGLTFSGDIGPIKSKYYVKSNHIIHGYHKNIDENVNF
Homology
The following BLAST results are available for this feature:
BLAST of CmoCh15G014210.1 vs.
Match NameE-valueIdentityDescription
BLAST of CmoCh15G014210.1 vs.
Match NameE-valueIdentityDescription
BLAST of CmoCh15G014210.1 vs.
Match NameE-valueIdentityDescription
BLAST of CmoCh15G014210.1 vs.
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CmoCh15G014210CmoCh15G014210gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmoCh15G014210.1:exon:10313CmoCh15G014210.1:exon:10313exon
CmoCh15G014210.1:exon:10312CmoCh15G014210.1:exon:10312exon
CmoCh15G014210.1:exon:10311CmoCh15G014210.1:exon:10311exon
CmoCh15G014210.1:exon:10310CmoCh15G014210.1:exon:10310exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmoCh15G014210.1:cdsCmoCh15G014210.1:cds_4CDS
CmoCh15G014210.1:cdsCmoCh15G014210.1:cds_3CDS
CmoCh15G014210.1:cdsCmoCh15G014210.1:cds_2CDS
CmoCh15G014210.1:cdsCmoCh15G014210.1:cdsCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CmoCh15G014210.1CmoCh15G014210.1-proteinpolypeptide