CmoCh15G013370.1 (mRNA) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh15G013370.1
Type	mRNA
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Unknown protein
Location	Cmo_Chr15: 9159602 .. 9160017 (+)
Sequence length	282
RNA-Seq Expression	CmoCh15G013370.1
Synteny	CmoCh15G013370.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGAAGTTGAGACGAAACCTCCTGCAGGGGCTCCGGAGAGCCGCAGCAGAGAGAGATTAAATAGGCCGAGTTGATGATTTGAAGCTGTCAAAAGGGAGGGGTGGTTGAGGACCACCGGCCAGTTGACAGTTCCGGAGACAGCGACGACGGCGTGGCAATGGCGGTGTGGCTCTCAATCAAATGAGGCTCTTGATTTTATAGCGCCCATTTGGTCTCAGGCCTTAACGTTGCAACTGCAATGGCCTGTAAATCGCTGGTTTCAAAGCTTCTTTTTTGGGGGTTTGTTTGAAATGGTCAATGGGCTTCATTTGGATTCTCATTGTTCGTTTTTCTGTTTTTTTCCTCCGTCTTTCCATTATTTTAGACGTCCATCCTGAATTTTGCCATTTATTTTCTAAATATTTCTGGTTAA

mRNA sequence

ATGGAAGAAGTTGAGACGAAACCTCCTGCAGGGGCTCCGGAGAGCCGCAGCAGAGAGAGATTAAATAGGCCGACTGTCAAAAGGGAGGGGTGGTTGAGGACCACCGGCCAGTTGACAGTTCCGGAGACAGCGACGACGGCGTGGCAATGGCGGTGTGGCTCTCAATCAAATGAGGCTCTTGATTTTATAGCGCCCATTTGGTCTCAGGCCTTAACGTTGCAACTGCAATGGCCTACGTCCATCCTGAATTTTGCCATTTATTTTCTAAATATTTCTGGTTAA

Coding sequence (CDS)

ATGGAAGAAGTTGAGACGAAACCTCCTGCAGGGGCTCCGGAGAGCCGCAGCAGAGAGAGATTAAATAGGCCGACTGTCAAAAGGGAGGGGTGGTTGAGGACCACCGGCCAGTTGACAGTTCCGGAGACAGCGACGACGGCGTGGCAATGGCGGTGTGGCTCTCAATCAAATGAGGCTCTTGATTTTATAGCGCCCATTTGGTCTCAGGCCTTAACGTTGCAACTGCAATGGCCTACGTCCATCCTGAATTTTGCCATTTATTTTCTAAATATTTCTGGTTAA

Protein sequence

MEEVETKPPAGAPESRSRERLNRPTVKREGWLRTTGQLTVPETATTAWQWRCGSQSNEALDFIAPIWSQALTLQLQWPTSILNFAIYFLNISG

Homology

The following BLAST results are available for this feature:

BLAST of CmoCh15G013370.1 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh15G013370.1 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh15G013370.1 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh15G013370.1 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..27

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmoCh15G013370	CmoCh15G013370	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh15G013370.1:exon:10061	CmoCh15G013370.1:exon:10061	exon
CmoCh15G013370.1:exon:10060	CmoCh15G013370.1:exon:10060	exon
CmoCh15G013370.1:exon:10059	CmoCh15G013370.1:exon:10059	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh15G013370.1:cds	CmoCh15G013370.1:cds	CDS
CmoCh15G013370.1:cds	CmoCh15G013370.1:cds_2	CDS
CmoCh15G013370.1:cds	CmoCh15G013370.1:cds_3	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmoCh15G013370.1	CmoCh15G013370.1-protein	polypeptide