CmoCh13G010310.1 (mRNA) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.CCTTTCTCGAAAAGTGATTGTAATGGCGGGAACGGAGGAACTCTCTTGGATTCTCTGATTGACTAATTTGTTATTTAACCAGATAAGAATCTTAATGAACGGGAGAAACTGAAATCCAGAGCGTTTCGTCGTTGACAGCTTCATGGGCACTGTGATCGACTCCCATTTCTTGGCCCTCACTGCCACTGTCACTGTAAGATTTACGACTTCTCTGATTGGGTATCAACTCTTTCTCACACCTATTTTCTGATTTACAGATTGGGTATCAACTGTCGTTCTTTATAATCACAGCTCTTCTCAGATTTGACAAAGTTACTGATTTCGCTGGTATTTACTTACTTTCCTTCTTATTTCTCAAGAATCTGAATTCGTTTTGCCGAGAAATAAAAGCGGAAGAGAATCGCTGGAATTAGTATTCCAGAGAAGGAATCCTGATTGTTTTTTTTTTTTAATTTTTTAATTTTTAATGTCGCGAGTGAAATGAGACTGTAAAGAAAGAATTTGGTCGTTTAGGTGCTGAGAAACGTAGAGGCATGTGCCTTTTTATATACTTGGTATCACTGTTTAGTTTTGATATCTAATTATGAAGTTCCTGATTTACAGGTAGCACAAATTTTGTGATACTTGCTGTTTTGACTCTAGTTCTTAAAGGCACTTGCCATTTTAGACAGGTAATGCTGTTTGATTCTGTAAGCTGCCTGAGAACGATTATTAAACAATTTTCCTGATGTAACAAATGCCAATCATGGTTTCAAAGTTTAGTGAAAACGTGCCTTGGGTTTAACTCTATAGTTTTGATTTACCATTTGACTGAAGAAACTTGTAGGAGTTCCATTTTGGCATACTTCACTGTCGGCATTTTGTGTTGCTCAAGTTGTGCATGTTCTGTTCTTGCACTGTATCCGAACTGCCTATTCTATGAAAAGAAGTTGGTGTTCTATAGAAAATTTTACTCTGAAAGTATGGTTCTATTTTTCCAGGTAATTCTGTCTGTGCTTGTAGTGACATGGGGCCTTCGTCTTGGTTTTTTCTTGTTAATGAGGTATGTATAACAGCTTGCCATGAATAAGTCTTCAATTTTCACATTTCATTTTGGTGGTAATCTTGTATTGCATGCTTAGAATTAGTATAAGAGATAGAACTTGTTTTGTTCTTCATATAGAACTTGTTTTGTTCTTCATACTCTTACAATTTAACTCAATAGCAATAAGCTTTTCTAAGCATTTTTCCATCATGAATATTAGATTTTAGCATGTTACAGTAAATGTCGTGGCCTTTAATCTGAAGAAAAATGTTTTTTACCTAGTTATGTATTATCAACCCAACTAGTAATTTATGTAAGCACACACATGGAAATCAATCAGCCCAAGCCCAAACCTACCGCTAGCATATATTGTCCTCTTTAGGCTTTCTCTTTCGAGCTTCCCCTCCAGGTTTTTAAAACGCGTCTGCTAGGGAGAGGTTTCCACGCTCTTATAAAGAATGCTTCGTTTTCCTCTCCGACCGATATGGGATCTCACACACTAATTCCTCAGTTGTTCTCAGTATTATTATTATCGGTGCAAGATGGGGCATAATTTGCAGAAGGAAGGGGAGATTTAATTCTTGAAATTAGAAAATTGGCCAAGGTAGTTTTCGAAATATATGCGTTTTCGAAATCATAAATTTTTGTTCAGTCTATGGATGACCTGATAGGACAATATCGATGGAAATCATTGTATATCAGGTGCTTATTGTAGTTTTTTTTTTTTTTTATTCTCTTTATGTTTCTCTCAGGATTTTGCAATGGGGAGAGGATCGACGTTTTGATAAAATTCGTAGTAATTTGGGAAAATTAGCAGTTTTCTGGATATTGCAGGTGGATTTGATTATTCTTTTATCATTCGTGCAATCCTCATATTAAAATCTCATTTTAGCTACTCTAACTCACCATTTCATTGATTCAGGCTGTCTGGGTCTGGACCGTAAGTTTACCTATCACGGTGGTCAATGCAAGCAATCACAATCCATCTCTCCGAGCTGCGGATGTAATTGGGTGGATTATGTGGTTAGTGGGTGTTGTAATCGAAACTACAGCTGATCAACAAAAATTGGCATTTAAAAACTCTCCAGTAAATAGGGGGAAGTGGTGCGATGTTGGACTTTGGAAGGTCTCTCGTCATCCTAATTACTTTGGTGAGGTTAGGCCACTGCCAAAAGTACATTTACTTTGTAACTGGCATTCCTCGTATTCTTTCTTTATGCACTTTCGAAAACTTTGTAAGTAGCTATCTATTTATGCTTAATATTCTTGCTTTATACTGAGGTCCTTTGGCCTTTCCATTAGCTTTAACAAAAGCTCACTCTACTTTATAATATTCCTCTCTAACCGTCCAAACCTACCACTGACAAATATTGCATTTTAAAACCTTGAGGAAGCCTAAAAGGAAAGTCTAAAAAAGACAATATCTGCTAGTAGTAGGTTTTGGCTAATACAAATAGTATCAGAGCCAGACATCGGGCGGTGTGCCAGCGAGGACGTTGGTCCCCCACAAGGGGTAGATTGTGAGATCTCACATCAATTGGAGAGGGGAACAAAACATTTCTTATAAAGGTGTGGAAACTTTTCTCTACTATACGCGTTTTAAAACCTTGAGGGGATGCTCGAAAGGGAAAACCCAAAGAGAGCAATACCTGCTAACGGTTGTTTGGGCGGTTACATCCTCTCACTTGACTTACTAGCCTGCCAAGTCAAGCCAAGGAATGACATTCTTCTTCGGAAGAAGAGTTGCTTGCGCTCTAGGTTATTCGTAGATACTTAGAAAATATAAATATCATTTTCTTGGACACCCTCATATGCCAGTGCTTAGCTTACGATATATTACTTTTCATAGGAAAGAATGCTCAAGATATGAACCTTTGATAAACTCAAATGTTGACATTTGTGATGAAGAAATTGTGTTTCCCTACGAGTAAGGATTCAAATTATTAGTTTGGTGGTGTGTAGCTGCACTGACTTATCGTATTGCGAATTATTTTCTACCACGGGGTTGCATATATTTTCTACCAGATACGTATTTCTCTTAAAATTCTTTTATAGATGAACGCTTTTAACAACGGTGATAACAGATCTTTCTTTGGTGGGGAATCTTCGTTGCTTCCACTCCCGTTCTGGAAGGTATTGAGTGGCTTGTGATACTTGGGCCAATATTCCTAACATTGCTGCTTCTTTTTGTCAGTGGGATCCCTCTACTTGAGGTTTGCTTTCCCCTCCCTTTCAATTAATGAGCAAATCTTTCTTCGACTTAATTACTAGCATGTTTTGTATTAACAGAAATCAGCAGATAAGAAGTTTGGGAATGTGACCGAATACGTACGTTATAAAAGAGAGACTAGGTGGGGTTCTTTTTTTTTCTTGTTCTTTCATTTATTAACACTACCACTAATTTAACAACCATATGGTAAAAGTAATGATCCGTTTGATTCTACTCCAGCCCCCTGATCCCACTGCCTACAGCAATATATGGAAACCTGCCCTCGTGGTTCAAGAAAAACTTTCTATTTGAATTTCCTTTTTACAGCCGCAAATTCCCCGGGGCGAGCAAAACTGGTGAGAAAGATAATTGTAACTTCATTGCTTTAATTGTAACTCATTTGCTTGCTTACGCATGCGTCACCTATATTATGTATCTGAAATAAAGCCAACATCTGTACTCATTTATGACTGATGGTTACTTAAAGCATGTAACAAAAACTATTGATATTTTACCTTTGTAAGTCTGATATCTTGACCGATAGTACTGAGCCAGCATCATTTGAAATTATGCAGGATCTATAAACGAATACCCGTGCATAATTTTTCTTCTTCATTTTCTTATTCTTTGAAGTTATATATTTTCAATTCAGGGATTTTATTAAGTATGACAAAATCATCAGGATGATAACTCTTGAAATGGCACAAGCTAATTCTATCTATTGCCTGAAGTTTCCTACGATTTGTGCAAGGTACAGAGCAAGCAAGGACGAAAGCAGCGACAGATTGA CCTTTCTCGAAAAGTGATTGTAATGGCGGGAACGGAGGAACTCTCTTGGATTCTCTGATTGACTAATTTGTTATTTAACCAGATAAGAATCTTAATGAACGGGAGAAACTGAAATCCAGAGCGTTTCGTCGTTGACAGCTTCATGGGCACTGTGATCGACTCCCATTTCTTGGCCCTCACTGCCACTGTCACTATTGGGTATCAACTGTCGTTCTTTATAATCACAGCTCTTCTCAGATTTGACAAAGTTACTGATTTCGCTGGTAGCACAAATTTTGTGATACTTGCTGTTTTGACTCTAGTTCTTAAAGGCACTTGCCATTTTAGACAGGTAATTCTGTCTGTGCTTGTAGTGACATGGGGCCTTCGTCTTGGTTTTTTCTTGTTAATGAGGATTTTGCAATGGGGAGAGGATCGACGTTTTGATAAAATTCGTAGTAATTTGGGAAAATTAGCAGTTTTCTGGATATTGCAGGCTGTCTGGGTCTGGACCGTAAGTTTACCTATCACGGTGGTCAATGCAAGCAATCACAATCCATCTCTCCGAGCTGCGGATGTAATTGGGTGGATTATGTGGTTAGTGGGTGTTGTAATCGAAACTACAGCTGATCAACAAAAATTGGCATTTAAAAACTCTCCAGTAAATAGGGGGAAGTGGTGCGATGTTGGACTTTGGAAGGTCTCTCGTCATCCTAATTACTTTGGTGAGATCTTTCTTTGGTGGGGAATCTTCGTTGCTTCCACTCCCGTTCTGGAAGGTATTGAGTGGCTTGTGATACTTGGGCCAATATTCCTAACATTGCTGCTTCTTTTTGTCAGTGGGATCCCTCTACTTGAGAAATCAGCAGATAAGAAGTTTGGGAATGTGACCGAATACGTACGTTATAAAAGAGAGACTAGCCCCCTGATCCCACTGCCTACAGCAATATATGGAAACCTGCCCTCGTGGTTCAAGAAAAACTTTCTATTTGAATTTCCTTTTTACAGCCGCAAATTCCCCGGGGCGAGCAAAACTGAGCAAGCAAGGACGAAAGCAGCGACAGATTGA ATGGGCACTGTGATCGACTCCCATTTCTTGGCCCTCACTGCCACTGTCACTATTGGGTATCAACTGTCGTTCTTTATAATCACAGCTCTTCTCAGATTTGACAAAGTTACTGATTTCGCTGGTAGCACAAATTTTGTGATACTTGCTGTTTTGACTCTAGTTCTTAAAGGCACTTGCCATTTTAGACAGGTAATTCTGTCTGTGCTTGTAGTGACATGGGGCCTTCGTCTTGGTTTTTTCTTGTTAATGAGGATTTTGCAATGGGGAGAGGATCGACGTTTTGATAAAATTCGTAGTAATTTGGGAAAATTAGCAGTTTTCTGGATATTGCAGGCTGTCTGGGTCTGGACCGTAAGTTTACCTATCACGGTGGTCAATGCAAGCAATCACAATCCATCTCTCCGAGCTGCGGATGTAATTGGGTGGATTATGTGGTTAGTGGGTGTTGTAATCGAAACTACAGCTGATCAACAAAAATTGGCATTTAAAAACTCTCCAGTAAATAGGGGGAAGTGGTGCGATGTTGGACTTTGGAAGGTCTCTCGTCATCCTAATTACTTTGGTGAGATCTTTCTTTGGTGGGGAATCTTCGTTGCTTCCACTCCCGTTCTGGAAGGTATTGAGTGGCTTGTGATACTTGGGCCAATATTCCTAACATTGCTGCTTCTTTTTGTCAGTGGGATCCCTCTACTTGAGAAATCAGCAGATAAGAAGTTTGGGAATGTGACCGAATACGTACGTTATAAAAGAGAGACTAGCCCCCTGATCCCACTGCCTACAGCAATATATGGAAACCTGCCCTCGTGGTTCAAGAAAAACTTTCTATTTGAATTTCCTTTTTACAGCCGCAAATTCCCCGGGGCGAGCAAAACTGAGCAAGCAAGGACGAAAGCAGCGACAGATTGA MGTVIDSHFLALTATVTIGYQLSFFIITALLRFDKVTDFAGSTNFVILAVLTLVLKGTCHFRQVILSVLVVTWGLRLGFFLLMRILQWGEDRRFDKIRSNLGKLAVFWILQAVWVWTVSLPITVVNASNHNPSLRAADVIGWIMWLVGVVIETTADQQKLAFKNSPVNRGKWCDVGLWKVSRHPNYFGEIFLWWGIFVASTPVLEGIEWLVILGPIFLTLLLLFVSGIPLLEKSADKKFGNVTEYVRYKRETSPLIPLPTAIYGNLPSWFKKNFLFEFPFYSRKFPGASKTEQARTKAATD Homology
BLAST of CmoCh13G010310.1 vs. ExPASy Swiss-Prot
Match: A0A1B5L6A5 (Probable O-methyltransferase ustE OS=Ustilaginoidea virens OX=1159556 GN=ustE PE=3 SV=1) HSP 1 Score: 47.8 bits (112), Expect = 2.6e-04 Identity = 23/67 (34.33%), Postives = 39/67 (58.21%), Query Frame = 0
BLAST of CmoCh13G010310.1 vs. ExPASy TrEMBL
Match: A0A6J1E7I5 (uncharacterized protein LOC111431342 isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111431342 PE=4 SV=1) HSP 1 Score: 607.8 bits (1566), Expect = 2.4e-170 Identity = 301/301 (100.00%), Postives = 301/301 (100.00%), Query Frame = 0
BLAST of CmoCh13G010310.1 vs. ExPASy TrEMBL
Match: A0A6J1EAE8 (uncharacterized protein LOC111431342 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111431342 PE=4 SV=1) HSP 1 Score: 602.8 bits (1553), Expect = 7.7e-169 Identity = 301/303 (99.34%), Postives = 301/303 (99.34%), Query Frame = 0
BLAST of CmoCh13G010310.1 vs. ExPASy TrEMBL
Match: A0A6J1KHP5 (uncharacterized protein LOC111495346 isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111495346 PE=4 SV=1) HSP 1 Score: 597.0 bits (1538), Expect = 4.2e-167 Identity = 295/301 (98.01%), Postives = 299/301 (99.34%), Query Frame = 0
BLAST of CmoCh13G010310.1 vs. ExPASy TrEMBL
Match: A0A6J1KPJ7 (uncharacterized protein LOC111495346 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111495346 PE=4 SV=1) HSP 1 Score: 592.0 bits (1525), Expect = 1.4e-165 Identity = 295/303 (97.36%), Postives = 299/303 (98.68%), Query Frame = 0
BLAST of CmoCh13G010310.1 vs. ExPASy TrEMBL
Match: A0A6J1ECP7 (uncharacterized protein LOC111431342 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111431342 PE=4 SV=1) HSP 1 Score: 589.7 bits (1519), Expect = 6.8e-165 Identity = 291/291 (100.00%), Postives = 291/291 (100.00%), Query Frame = 0
BLAST of CmoCh13G010310.1 vs. NCBI nr
Match: XP_022923721.1 (uncharacterized protein LOC111431342 isoform X3 [Cucurbita moschata] >XP_022923722.1 uncharacterized protein LOC111431342 isoform X3 [Cucurbita moschata]) HSP 1 Score: 607.8 bits (1566), Expect = 5.0e-170 Identity = 301/301 (100.00%), Postives = 301/301 (100.00%), Query Frame = 0
BLAST of CmoCh13G010310.1 vs. NCBI nr
Match: XP_022923718.1 (uncharacterized protein LOC111431342 isoform X1 [Cucurbita moschata] >XP_022923719.1 uncharacterized protein LOC111431342 isoform X1 [Cucurbita moschata]) HSP 1 Score: 602.8 bits (1553), Expect = 1.6e-168 Identity = 301/303 (99.34%), Postives = 301/303 (99.34%), Query Frame = 0
BLAST of CmoCh13G010310.1 vs. NCBI nr
Match: KAG7019915.1 (hypothetical protein SDJN02_18882 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 600.9 bits (1548), Expect = 6.1e-168 Identity = 298/301 (99.00%), Postives = 299/301 (99.34%), Query Frame = 0
BLAST of CmoCh13G010310.1 vs. NCBI nr
Match: XP_023001105.1 (uncharacterized protein LOC111495346 isoform X3 [Cucurbita maxima] >XP_023001106.1 uncharacterized protein LOC111495346 isoform X3 [Cucurbita maxima]) HSP 1 Score: 597.0 bits (1538), Expect = 8.7e-167 Identity = 295/301 (98.01%), Postives = 299/301 (99.34%), Query Frame = 0
BLAST of CmoCh13G010310.1 vs. NCBI nr
Match: KAG6584324.1 (hypothetical protein SDJN03_20256, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 595.9 bits (1535), Expect = 1.9e-166 Identity = 298/303 (98.35%), Postives = 299/303 (98.68%), Query Frame = 0
BLAST of CmoCh13G010310.1 vs. TAIR 10
Match: AT1G73650.3 (Protein of unknown function (DUF1295) ) HSP 1 Score: 446.8 bits (1148), Expect = 1.4e-125 Identity = 214/301 (71.10%), Postives = 247/301 (82.06%), Query Frame = 0
BLAST of CmoCh13G010310.1 vs. TAIR 10
Match: AT1G73650.2 (Protein of unknown function (DUF1295) ) HSP 1 Score: 443.0 bits (1138), Expect = 2.0e-124 Identity = 212/286 (74.13%), Postives = 241/286 (84.27%), Query Frame = 0
BLAST of CmoCh13G010310.1 vs. TAIR 10
Match: AT1G18180.1 (Protein of unknown function (DUF1295) ) HSP 1 Score: 439.1 bits (1128), Expect = 2.8e-123 Identity = 207/286 (72.38%), Postives = 240/286 (83.92%), Query Frame = 0
BLAST of CmoCh13G010310.1 vs. TAIR 10
Match: AT1G73650.1 (Protein of unknown function (DUF1295) ) HSP 1 Score: 324.3 bits (830), Expect = 1.0e-88 Identity = 149/204 (73.04%), Postives = 168/204 (82.35%), Query Frame = 0
BLAST of CmoCh13G010310.1 vs. TAIR 10
Match: AT1G73650.4 (Protein of unknown function (DUF1295) ) HSP 1 Score: 324.3 bits (830), Expect = 1.0e-88 Identity = 149/204 (73.04%), Postives = 168/204 (82.35%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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