CmoCh13G001870.1 (mRNA) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh13G001870.1
Type	mRNA
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	fasciclin-like arabinogalactan protein 12
Location	Cmo_Chr13: 1269241 .. 1271509 (+)
Sequence length	1029
RNA-Seq Expression	CmoCh13G001870.1
Synteny	CmoCh13G001870.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATAATCTTCTATTTTGGTGTTTTTGGCGATCGAGAGGGAAGGATCATGAATACCCTCTTCTCTCTCATAATCTTCTTTCTCTACCTCTTCGTTGGTGGCAGTTATGGGCAGTCGCCGGCGGAGGCTCCGGGACCGCCGCCGCCGATGAATATATCAAGAATACTGGAAAAGGGTGGGCAGTTCAGTATTCTGATAAGGCTTTTGAAGAGCACTCAAGTGGCCAACCAAATCAACACTCAGCTTAATGACTCCAATTCTGAACTCACCATTTTTGCCCCCACTGATAATGCTTTCTCCAACCTCCAATCCGGTACTTTTTTTTTTTTTTCTTTTTTAATTAATTAATTTATTATTATTTCCCTCCATATATAATTATTTAATTTAATTAGTATTAGTTATTTCTTCGGTCGATAATAAATTATTTTAATATTTGATTTTAGAGATGTTCATGGAATGAGTCGGGGATGTGGAAGCTTTTTGGGTCTTTATTCCCCTCCTAATTCATTTTCTATCAAATTCTACATTTATTTTTTTTTAAAGAATAATATTAAAATATTCTTTTCAATAATTTTTAATTGATAATTTCTATTTTCTTATAAAGTTTCTATAAAAAAAAAAAAAGTAAATTTTTTAATAAATTTAATAATTTTTATAAAGAAAAATTTAAATGAGATCAGTTGGGTTTGGGGTAGGGATCAAGAGGTGAGATCTAACCTTGGCTGGAAAAGAGAACGTAGCGTCCTTTATATAGGTGTGGAAACCTTTTAGTAGCAGACGTGTTTTAAAAACCTTGACGGAAAGTCTGGAAGAGAAAGCCCAAAGAAATAATATTTGCTAGTAATGGGCTTAGACCGTTACAAATGGTATCAGAGTAAGACACTTGGTGATGTGTCAGTGAGGAAGTTGAGCCCTGAAGGGGAGTGGACACAAGGCGGTGTGTCAATAAGGATGTTGGGACTCGAAGAGGGTGGATTGGGGAATCCCACATCGATTGGAAAAGAGAATGAGTGCTAGCAAGAGGACGCGGGACCCTGAATGGGGTGGATTGTGAGGTCCCACATCCGTTGGGGAGGAGAATGTAACGTTTTTCGCTGGGCCCCGAAGGGGAATGTGAGATTGCACATCTGTTGAGGAGAAGAACGAAACGTTTTTCACTGGGTCCCGAAGAGGGGTGGATTGTGAGCTCCCACTCCGTTGGGGAGGAGAACTAAACATTATTCGCTGGGCCCCGAATGGGGTAGATTGTGAGATCCTACATCCGTTGGGGAGGAGAACGAACATTATTTGTTGGGTCCCGAAGGAGGGTGGATTGTGAGATCCCACAACTGTTGGGGAGAAAAACGAAACATTTTTTATAAAAATGTAGAAACCTCTCCTTACCAGACTCATTTTAAAAATTTCAACAGAAAATCCGAGAGCACAATATCAACTAGGCTTGTGCTGTTACACTAGAAATATAATCTCTATCCCGGATCTTTAACCTAAAATATTTATATGCCATTAACTTTTAAATAGTTGAAATAATTGAATGATTGATGAATACAAAACAGGCACACTCAACTCCCTCAACGACCAAGAAAAAGTAGAGCTTCTCCAATTCCACATGATCCCAACTTTCCTCTCTCTCTCAAACTTCCAAACAGTCAGCAATCCGGTCAGAACTCAGGCCGGCGACGCCTATGAGTTCCCTCTCAACGTCACCACCTCCGGCAACTCCGTCAACGTCTCCTCCGGTCTCACCAACACCTCCATCTCCGGCACCGTCTACTCCGACAACCAGCTCGCCGTCTACCAGATCGACTCAGTTCTCAAGCCAATTGGCGTCTTCCAGCCCCGCCCACCACCCCCGGCTCCAGCGCCGGAGAAGTCTAAGAAGAAGGCCAAGGCCATTTCTGAGAATCCCAAGGATTCGACCGATGACAACTCCTCCGCCGTTCCGCTCGCCGGAATGTCGGCCTTCTTCACCGGAGCTGCCGCCGTCGCCGGAATAATGCTGGTGTGGATAAATACCTGATCTAATTTTCAAGGTGTATTGTGGGAGAAATTTCATCTATTGCTTTTGAAATTGGTTTTATTTCTGTATTATAAATTGATGTTCGATTGTGTTGTTTTGTTTTAGGGTTTTATTGTTGATTTTGTTTTTTTATTTGTTTTTTCTCTTTAAAGTTTGTGTTAAATTTATTTTAAGAATCTTTATGAGAAAAATTGTATAATATTTTTTGTATTAAAAGATTTTGTTAGCACGATGGTGAAGAAAAAGTGAGCCGCC

mRNA sequence

ATAATCTTCTATTTTGGTGTTTTTGGCGATCGAGAGGGAAGGATCATGAATACCCTCTTCTCTCTCATAATCTTCTTTCTCTACCTCTTCGTTGGTGGCAGTTATGGGCAGTCGCCGGCGGAGGCTCCGGGACCGCCGCCGCCGATGAATATATCAAGAATACTGGAAAAGGGTGGGCAGTTCAGTATTCTGATAAGGCTTTTGAAGAGCACTCAAGTGGCCAACCAAATCAACACTCAGCTTAATGACTCCAATTCTGAACTCACCATTTTTGCCCCCACTGATAATGCTTTCTCCAACCTCCAATCCGGCACACTCAACTCCCTCAACGACCAAGAAAAAGTAGAGCTTCTCCAATTCCACATGATCCCAACTTTCCTCTCTCTCTCAAACTTCCAAACAGTCAGCAATCCGGTCAGAACTCAGGCCGGCGACGCCTATGAGTTCCCTCTCAACGTCACCACCTCCGGCAACTCCGTCAACGTCTCCTCCGGTCTCACCAACACCTCCATCTCCGGCACCGTCTACTCCGACAACCAGCTCGCCGTCTACCAGATCGACTCAGTTCTCAAGCCAATTGGCGTCTTCCAGCCCCGCCCACCACCCCCGGCTCCAGCGCCGGAGAAGTCTAAGAAGAAGGCCAAGGCCATTTCTGAGAATCCCAAGGATTCGACCGATGACAACTCCTCCGCCGTTCCGCTCGCCGGAATGTCGGCCTTCTTCACCGGAGCTGCCGCCGTCGCCGGAATAATGCTGGTGTGGATAAATACCTGATCTAATTTTCAAGGTGTATTGTGGGAGAAATTTCATCTATTGCTTTTGAAATTGGTTTTATTTCTGTATTATAAATTGATGTTCGATTGTGTTGTTTTGTTTTAGGGTTTTATTGTTGATTTTGTTTTTTTATTTGTTTTTTCTCTTTAAAGTTTGTGTTAAATTTATTTTAAGAATCTTTATGAGAAAAATTGTATAATATTTTTTGTATTAAAAGATTTTGTTAGCACGATGGTGAAGAAAAAGTGAGCCGCC

Coding sequence (CDS)

ATGAATACCCTCTTCTCTCTCATAATCTTCTTTCTCTACCTCTTCGTTGGTGGCAGTTATGGGCAGTCGCCGGCGGAGGCTCCGGGACCGCCGCCGCCGATGAATATATCAAGAATACTGGAAAAGGGTGGGCAGTTCAGTATTCTGATAAGGCTTTTGAAGAGCACTCAAGTGGCCAACCAAATCAACACTCAGCTTAATGACTCCAATTCTGAACTCACCATTTTTGCCCCCACTGATAATGCTTTCTCCAACCTCCAATCCGGCACACTCAACTCCCTCAACGACCAAGAAAAAGTAGAGCTTCTCCAATTCCACATGATCCCAACTTTCCTCTCTCTCTCAAACTTCCAAACAGTCAGCAATCCGGTCAGAACTCAGGCCGGCGACGCCTATGAGTTCCCTCTCAACGTCACCACCTCCGGCAACTCCGTCAACGTCTCCTCCGGTCTCACCAACACCTCCATCTCCGGCACCGTCTACTCCGACAACCAGCTCGCCGTCTACCAGATCGACTCAGTTCTCAAGCCAATTGGCGTCTTCCAGCCCCGCCCACCACCCCCGGCTCCAGCGCCGGAGAAGTCTAAGAAGAAGGCCAAGGCCATTTCTGAGAATCCCAAGGATTCGACCGATGACAACTCCTCCGCCGTTCCGCTCGCCGGAATGTCGGCCTTCTTCACCGGAGCTGCCGCCGTCGCCGGAATAATGCTGGTGTGGATAAATACCTGA

Protein sequence

MNTLFSLIIFFLYLFVGGSYGQSPAEAPGPPPPMNISRILEKGGQFSILIRLLKSTQVANQINTQLNDSNSELTIFAPTDNAFSNLQSGTLNSLNDQEKVELLQFHMIPTFLSLSNFQTVSNPVRTQAGDAYEFPLNVTTSGNSVNVSSGLTNTSISGTVYSDNQLAVYQIDSVLKPIGVFQPRPPPPAPAPEKSKKKAKAISENPKDSTDDNSSAVPLAGMSAFFTGAAAVAGIMLVWINT

Homology

[Close]

BLAST of CmoCh13G001870.1 vs. ExPASy Swiss-Prot
Match: Q8LEE9 (Fasciclin-like arabinogalactan protein 12 OS=Arabidopsis thaliana OX=3702 GN=FLA12 PE=2 SV=2)

HSP 1 Score: 236.1 bits (601), Expect = 4.1e-61
Identity = 129/221 (58.37%), Postives = 168/221 (76.02%), Query Frame = 0


Query: 23  SPAEAPGPPPPMNISRILEKGGQFSILIRLLKSTQVANQINTQLNDSNSELTIFAPTDNA 82
           SPA AP PP P N+++ILEK GQF++ IRLLKST VANQ+  QLN+S++ +TIFAP+D++
Sbjct: 27  SPAVAPAPPGPTNVTKILEKAGQFTVFIRLLKSTGVANQLYGQLNNSDNGITIFAPSDSS 86

Query: 83  FSNLQSGTLNSLNDQEKVELLQFHMIPTFLSLSNFQTVSNPVRTQAGDAYE--FPLNVTT 142
           F+ L++GTLNSL D+++VEL+QFH+IP+++S SNFQT+SNP+RTQAGD+ +  FPLNVTT
Sbjct: 87  FTGLKAGTLNSLTDEQQVELIQFHVIPSYVSSSNFQTISNPLRTQAGDSADGHFPLNVTT 146

Query: 143 SGNSVNVSSGLTNTSISGTVYSDNQLAVYQIDSVLKPIGVFQPRPPPPAPAP--EKSKKK 202
           SGN+VN++SG+TNT++SG VYSD QLAVYQ+D VL P  VF PRPP PAPAP   KSKKK
Sbjct: 147 SGNTVNITSGVTNTTVSGNVYSDGQLAVYQVDKVLLPQQVFDPRPPAPAPAPSVSKSKKK 206

Query: 203 AKAISENPKDSTDDNSSAVPLAGMSAFFTGAAAVAGIMLVW 240
                 +  DS  D S A+   G S     +  V  +ML W
Sbjct: 207 KDDSDSSSDDSPADASFALRNVG-SVCDAVSFCVMSVMLAW 246

[Close]

BLAST of CmoCh13G001870.1 vs. ExPASy Swiss-Prot
Match: Q8LEJ6 (Fasciclin-like arabinogalactan protein 11 OS=Arabidopsis thaliana OX=3702 GN=FLA11 PE=2 SV=2)

HSP 1 Score: 219.9 bits (559), Expect = 3.1e-56
Identity = 123/238 (51.68%), Postives = 171/238 (71.85%), Query Frame = 0


Query: 9   IFFLYLFVGGSYGQSPAEAPGPPPPMNISRILEKGGQFSILIRLLKSTQVANQINTQLND 68
           +F  +L +  +YGQ+P  APGP  P NI+ ILEK GQF++ IRLLKSTQ ++QINTQLN 
Sbjct: 12  LFIFFLVIATTYGQAP--APGPSGPTNITAILEKAGQFTLFIRLLKSTQASDQINTQLNS 71

Query: 69  SNSE-LTIFAPTDNAFSNLQSGTLNSLNDQEKVELLQFHMIPTFLSLSNFQTVSNPVRTQ 128
           S+S  LT+FAPTDNAF++L+SGTLNSL+DQ+KV+L+QFH++PT +++  FQTVSNP+RTQ
Sbjct: 72  SSSNGLTVFAPTDNAFNSLKSGTLNSLSDQQKVQLVQFHVLPTLITMPQFQTVSNPLRTQ 131

Query: 129 AGDAY--EFPLNVTTSGNSVNVSSGLTNTSISGTVYSDNQLAVYQIDSVLKPIGVFQPRP 188
           AGD    +FPLN+T+SGN VN+++G+ + +++ +VYSD QLAVYQ+D VL P+ +F    
Sbjct: 132 AGDGQNGKFPLNITSSGNQVNITTGVVSATVANSVYSDKQLAVYQVDQVLLPLAMF-GSS 191

Query: 189 PPPAPAPEKSKKKAKAIS---ENPKDSTDDNSSAVPLAGMSAFFTGAAAVAGIMLVWI 241
             PAPAPEK    +K  +   ++  DSTD + +     G     T  AA+A    +WI
Sbjct: 192 VAPAPAPEKGGSVSKGSASGGDDGGDSTDSSDAERTGFGFGIRITTVAAIAASSSLWI 246

[Close]

BLAST of CmoCh13G001870.1 vs. ExPASy Swiss-Prot
Match: Q9FFH6 (Fasciclin-like arabinogalactan protein 13 OS=Arabidopsis thaliana OX=3702 GN=FLA13 PE=1 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 2.2e-38
Identity = 96/212 (45.28%), Postives = 134/212 (63.21%), Query Frame = 0


Query: 22  QSPAEAPGPPPPMNISRILEKGGQFSILIRLLKSTQVANQINTQLNDSNSELTIFAPTDN 81
           Q  A APGP  P+NI+ ILEKGGQF  LIRLL +TQ+ NQIN Q+N S+  +T+ APTDN
Sbjct: 23  QRAAPAPGPAGPINITAILEKGGQFVTLIRLLNTTQIGNQINIQINSSSEGMTVLAPTDN 82

Query: 82  AFSNLQSGTLNSLNDQEKVELLQFHMIPTFLSLSNFQTVSNPVRTQAGD---AYEFPLNV 141
           AF NL+ GTLN L+  ++V+L+ +H+ P F +L +  +VSNPVRTQA        + LN 
Sbjct: 83  AFQNLKPGTLNKLSPDDQVKLILYHVSPKFYTLEDLLSVSNPVRTQASGRDVGGVYGLNF 142

Query: 142 TTSGNSVNVSSGLTNTSISGTVYSDNQLAVYQIDSVLKPIGVFQPR------PPPPAPAP 201
           T  GN VNVS+G+  T +S ++  +  LAVY +D VL P  +F  R      PPP + +P
Sbjct: 143 TGQGNQVNVSTGVVETRLSTSLRQERPLAVYVVDMVLLPEEMFGERKISPMAPPPKSKSP 202

Query: 202 E-----KSKKKAKAISENPKDSTDDNSSAVPL 220
           +     +S KKA A SE+ K  + + ++ + L
Sbjct: 203 DVSDDSESSKKAAAPSESEKSGSGEMNTGLGL 234

[Close]

BLAST of CmoCh13G001870.1 vs. ExPASy Swiss-Prot
Match: Q9SIL7 (Fasciclin-like arabinogalactan protein 6 OS=Arabidopsis thaliana OX=3702 GN=FLA6 PE=2 SV=2)

HSP 1 Score: 147.5 bits (371), Expect = 1.9e-34
Identity = 98/224 (43.75%), Postives = 135/224 (60.27%), Query Frame = 0


Query: 2   NTLFSLIIFFLYLFVGGSYGQSPAEAPGP---PPPMNISRILEKGGQFSILIRLLKSTQV 61
           ++LFS ++  ++LF    Y QS   AP P     P+N++ ILE G QF+ LI+LL +TQV
Sbjct: 3   SSLFSYVVLLIFLFT-IPYIQSQPTAPAPTTEKSPINLTAILEAGHQFTTLIQLLNTTQV 62

Query: 62  ANQINTQLNDSNSELTIFAPTDNAFSNLQSGTLNSLNDQEKVELLQFHMIPTFLSLSNFQ 121
             Q++ QLN S+  +TIFAPTDNAF+ L+ GTLNSL  Q++++L+ +H+IP + SLS+  
Sbjct: 63  GFQVSVQLNSSDQGMTIFAPTDNAFNKLKPGTLNSLTYQQQIQLMLYHIIPKYYSLSDLL 122

Query: 122 TVSNPVRTQA--GDAYEFPLNVT--TSGNSVNVSSGLTNTSISGTVYSDNQLAVYQIDSV 181
             SNPVRTQA   D   F LN T     N VNVS+G+  T I+  +     LAVY +DSV
Sbjct: 123 LASNPVRTQATGQDGGVFGLNFTGQAQSNQVNVSTGVVETRINNALRQQFPLAVYVVDSV 182

Query: 182 LKPIGVFQPRPPPP-APAPEKSKKKAKAISENPKDSTDDNSSAV 218
           L P  +F  +  P  APAP+ S   + A S    D      S+V
Sbjct: 183 LLPEELFGTKTTPTGAPAPKSSTSSSDADSPAADDEHKSAGSSV 225

[Close]

BLAST of CmoCh13G001870.1 vs. ExPASy Swiss-Prot
Match: Q9ZWA8 (Fasciclin-like arabinogalactan protein 9 OS=Arabidopsis thaliana OX=3702 GN=FLA9 PE=2 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 5.6e-34
Identity = 92/219 (42.01%), Postives = 131/219 (59.82%), Query Frame = 0


Query: 3   TLFSLIIFFLYLFVGGSYGQSPAEAPGPPPPMNISRILEKGGQFSILIRLLKSTQVANQI 62
           TL  L++    L    +  Q  A AP P  P+N++ ILEKGGQF+  I LL  TQV +Q+
Sbjct: 7   TLAPLLLIAAVLLATKATAQPAAPAPEPAGPINLTAILEKGGQFTTFIHLLNITQVGSQV 66

Query: 63  NTQLNDSNSELTIFAPTDNAFSNLQSGTLNSLNDQEKVELLQFHMIPTFLSLSNFQTVSN 122
           N Q+N S+  +T+FAPTDNAF NL+ GTLN L+  ++V+L+ +H+ P + S+ +  +VSN
Sbjct: 67  NIQVNSSSEGMTVFAPTDNAFQNLKPGTLNQLSPDDQVKLILYHVSPKYYSMDDLLSVSN 126

Query: 123 PVRTQAG--DAYEFPLNVTTSGNSVNVSSGLTNTSISGTVYSDNQLAVYQIDSVLKPIGV 182
           PVRTQA   D   + LN T   N +NVS+G   T IS ++     LAVY +D VL P  +
Sbjct: 127 PVRTQASGRDNGVYGLNFTGQTNQINVSTGYVETRISNSLRQQRPLAVYVVDMVLLPGEM 186

Query: 183 F-QPRPPPPAPAPEKSKKKAKAISENPKDSTDDNSSAVP 219
           F + +  P APAP   K K+  +++   DS     +A P
Sbjct: 187 FGEHKLSPIAPAP---KSKSGGVTD---DSGSTKKAASP 219

[Close]

BLAST of CmoCh13G001870.1 vs. ExPASy TrEMBL
Match: A0A6J1HIC8 (fasciclin-like arabinogalactan protein 12 OS=Cucurbita moschata OX=3662 GN=LOC111464673 PE=3 SV=1)

HSP 1 Score: 461.5 bits (1186), Expect = 2.2e-126
Identity = 242/242 (100.00%), Postives = 242/242 (100.00%), Query Frame = 0


Query: 1   MNTLFSLIIFFLYLFVGGSYGQSPAEAPGPPPPMNISRILEKGGQFSILIRLLKSTQVAN 60
           MNTLFSLIIFFLYLFVGGSYGQSPAEAPGPPPPMNISRILEKGGQFSILIRLLKSTQVAN
Sbjct: 1   MNTLFSLIIFFLYLFVGGSYGQSPAEAPGPPPPMNISRILEKGGQFSILIRLLKSTQVAN 60

Query: 61  QINTQLNDSNSELTIFAPTDNAFSNLQSGTLNSLNDQEKVELLQFHMIPTFLSLSNFQTV 120
           QINTQLNDSNSELTIFAPTDNAFSNLQSGTLNSLNDQEKVELLQFHMIPTFLSLSNFQTV
Sbjct: 61  QINTQLNDSNSELTIFAPTDNAFSNLQSGTLNSLNDQEKVELLQFHMIPTFLSLSNFQTV 120

Query: 121 SNPVRTQAGDAYEFPLNVTTSGNSVNVSSGLTNTSISGTVYSDNQLAVYQIDSVLKPIGV 180
           SNPVRTQAGDAYEFPLNVTTSGNSVNVSSGLTNTSISGTVYSDNQLAVYQIDSVLKPIGV
Sbjct: 121 SNPVRTQAGDAYEFPLNVTTSGNSVNVSSGLTNTSISGTVYSDNQLAVYQIDSVLKPIGV 180

Query: 181 FQPRPPPPAPAPEKSKKKAKAISENPKDSTDDNSSAVPLAGMSAFFTGAAAVAGIMLVWI 240
           FQPRPPPPAPAPEKSKKKAKAISENPKDSTDDNSSAVPLAGMSAFFTGAAAVAGIMLVWI
Sbjct: 181 FQPRPPPPAPAPEKSKKKAKAISENPKDSTDDNSSAVPLAGMSAFFTGAAAVAGIMLVWI 240

Query: 241 NT 243
           NT
Sbjct: 241 NT 242

[Close]

BLAST of CmoCh13G001870.1 vs. ExPASy TrEMBL
Match: A0A6J1HZ28 (fasciclin-like arabinogalactan protein 12 OS=Cucurbita maxima OX=3661 GN=LOC111469411 PE=3 SV=1)

HSP 1 Score: 453.0 bits (1164), Expect = 7.9e-124
Identity = 237/242 (97.93%), Postives = 239/242 (98.76%), Query Frame = 0


Query: 1   MNTLFSLIIFFLYLFVGGSYGQSPAEAPGPPPPMNISRILEKGGQFSILIRLLKSTQVAN 60
           MNTLFSLIIFFLYLFVGGS+GQSPAEAPGPPPPMNISRILEKGGQFSILIRLLKSTQVAN
Sbjct: 1   MNTLFSLIIFFLYLFVGGSFGQSPAEAPGPPPPMNISRILEKGGQFSILIRLLKSTQVAN 60

Query: 61  QINTQLNDSNSELTIFAPTDNAFSNLQSGTLNSLNDQEKVELLQFHMIPTFLSLSNFQTV 120
           QINTQLNDSNSELTIFAPTDNAFSNLQSGTLNSLNDQEKVELLQFHMIPTFLSLSNFQTV
Sbjct: 61  QINTQLNDSNSELTIFAPTDNAFSNLQSGTLNSLNDQEKVELLQFHMIPTFLSLSNFQTV 120

Query: 121 SNPVRTQAGDAYEFPLNVTTSGNSVNVSSGLTNTSISGTVYSDNQLAVYQIDSVLKPIGV 180
           SNPVRTQAGDAYEFPLNVTTSGNSVNVSSGLTNTSISGTVYSDNQLAVYQIDSVLKPIGV
Sbjct: 121 SNPVRTQAGDAYEFPLNVTTSGNSVNVSSGLTNTSISGTVYSDNQLAVYQIDSVLKPIGV 180

Query: 181 FQPRPPPPAPAPEKSKKKAKAISENPKDSTDDNSSAVPLAGMSAFFTGAAAVAGIMLVWI 240
           FQPRPPPPAPAPEKSKKKAKAISE+PKDSTDDNSSAVPL GM  FFTGAAAVAGIMLVWI
Sbjct: 181 FQPRPPPPAPAPEKSKKKAKAISEDPKDSTDDNSSAVPLTGMPVFFTGAAAVAGIMLVWI 240

Query: 241 NT 243
           NT
Sbjct: 241 NT 242

[Close]

BLAST of CmoCh13G001870.1 vs. ExPASy TrEMBL
Match: A0A5A7UNV5 (Fasciclin-like arabinogalactan protein 12 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold690G00050 PE=3 SV=1)

HSP 1 Score: 416.4 bits (1069), Expect = 8.2e-113
Identity = 213/241 (88.38%), Postives = 229/241 (95.02%), Query Frame = 0


Query: 2   NTLFSLIIFFLYLFVGGSYGQSPAEAPGPPPPMNISRILEKGGQFSILIRLLKSTQVANQ 61
           N+LFSL+I  ++ F+  SYGQSPAEAPGPPPPMNIS+ILEKGGQF++LIRLLKSTQVANQ
Sbjct: 3   NSLFSLVILLIFFFIDCSYGQSPAEAPGPPPPMNISKILEKGGQFNVLIRLLKSTQVANQ 62

Query: 62  INTQLNDSNSELTIFAPTDNAFSNLQSGTLNSLNDQEKVELLQFHMIPTFLSLSNFQTVS 121
           INTQLNDSNSELTIFAPTDNAFSNLQSGTLNSLNDQEKVELLQFHMIPTFLSLSNFQT+S
Sbjct: 63  INTQLNDSNSELTIFAPTDNAFSNLQSGTLNSLNDQEKVELLQFHMIPTFLSLSNFQTIS 122

Query: 122 NPVRTQAGDAYEFPLNVTTSGNSVNVSSGLTNTSISGTVYSDNQLAVYQIDSVLKPIGVF 181
           NPVRTQAGDAYEFPLNVTTSGNSVN+SSGL NTSISGTVY+DNQLA+YQIDSVLKPIGVF
Sbjct: 123 NPVRTQAGDAYEFPLNVTTSGNSVNISSGLVNTSISGTVYTDNQLAIYQIDSVLKPIGVF 182

Query: 182 QPRPPPPAPAPEKSKKKAKAISENPKDSTDDNSSAVPLAGMSAFFTGAAAVAGIMLVWIN 241
           QPRPPPPAPAPEKSKKKAK ISE+PKDS DDNSSAVPLAG+S+F T AA V GIMLVWIN
Sbjct: 183 QPRPPPPAPAPEKSKKKAKGISESPKDSDDDNSSAVPLAGISSFSTEAAVVVGIMLVWIN 242

Query: 242 T 243
           +
Sbjct: 243 S 243

[Close]

BLAST of CmoCh13G001870.1 vs. ExPASy TrEMBL
Match: A0A1S3CKI9 (fasciclin-like arabinogalactan protein 12 OS=Cucumis melo OX=3656 GN=LOC103501848 PE=3 SV=1)

HSP 1 Score: 416.4 bits (1069), Expect = 8.2e-113
Identity = 213/241 (88.38%), Postives = 229/241 (95.02%), Query Frame = 0


Query: 2   NTLFSLIIFFLYLFVGGSYGQSPAEAPGPPPPMNISRILEKGGQFSILIRLLKSTQVANQ 61
           N+LFSL+I  ++ F+  SYGQSPAEAPGPPPPMNIS+ILEKGGQF++LIRLLKSTQVANQ
Sbjct: 3   NSLFSLVILLIFFFIDCSYGQSPAEAPGPPPPMNISKILEKGGQFNVLIRLLKSTQVANQ 62

Query: 62  INTQLNDSNSELTIFAPTDNAFSNLQSGTLNSLNDQEKVELLQFHMIPTFLSLSNFQTVS 121
           INTQLNDSNSELTIFAPTDNAFSNLQSGTLNSLNDQEKVELLQFHMIPTFLSLSNFQT+S
Sbjct: 63  INTQLNDSNSELTIFAPTDNAFSNLQSGTLNSLNDQEKVELLQFHMIPTFLSLSNFQTIS 122

Query: 122 NPVRTQAGDAYEFPLNVTTSGNSVNVSSGLTNTSISGTVYSDNQLAVYQIDSVLKPIGVF 181
           NPVRTQAGDAYEFPLNVTTSGNSVN+SSGL NTSISGTVY+DNQLA+YQIDSVLKPIGVF
Sbjct: 123 NPVRTQAGDAYEFPLNVTTSGNSVNISSGLVNTSISGTVYTDNQLAIYQIDSVLKPIGVF 182

Query: 182 QPRPPPPAPAPEKSKKKAKAISENPKDSTDDNSSAVPLAGMSAFFTGAAAVAGIMLVWIN 241
           QPRPPPPAPAPEKSKKKAK ISE+PKDS DDNSSAVPLAG+S+F T AA V GIMLVWIN
Sbjct: 183 QPRPPPPAPAPEKSKKKAKGISESPKDSDDDNSSAVPLAGISSFSTEAAVVVGIMLVWIN 242

Query: 242 T 243
           +
Sbjct: 243 S 243

[Close]

BLAST of CmoCh13G001870.1 vs. ExPASy TrEMBL
Match: A0A0A0LVA0 (Arabinogalactan protein 2 OS=Cucumis sativus OX=3659 GN=Csa_1G085380 PE=3 SV=1)

HSP 1 Score: 410.6 bits (1054), Expect = 4.5e-111
Identity = 210/241 (87.14%), Postives = 227/241 (94.19%), Query Frame = 0


Query: 2   NTLFSLIIFFLYLFVGGSYGQSPAEAPGPPPPMNISRILEKGGQFSILIRLLKSTQVANQ 61
           N+LFSL+I  ++ F+  SYGQSPAEAPGPPPPMNI++ILEKGGQF++LIRLLK+TQVANQ
Sbjct: 3   NSLFSLVILLIFFFLDCSYGQSPAEAPGPPPPMNITKILEKGGQFNVLIRLLKNTQVANQ 62

Query: 62  INTQLNDSNSELTIFAPTDNAFSNLQSGTLNSLNDQEKVELLQFHMIPTFLSLSNFQTVS 121
           INTQLNDSNSELT+FAPTDNAFSNLQSGTLNSLNDQEKVELLQFHMIPTFLSLSNFQT+S
Sbjct: 63  INTQLNDSNSELTLFAPTDNAFSNLQSGTLNSLNDQEKVELLQFHMIPTFLSLSNFQTIS 122

Query: 122 NPVRTQAGDAYEFPLNVTTSGNSVNVSSGLTNTSISGTVYSDNQLAVYQIDSVLKPIGVF 181
           NPVRTQAGDAYEFPLNVTTSGNSVNVSSGL NTSISGTVY+DNQLA+YQIDSVLKPIGVF
Sbjct: 123 NPVRTQAGDAYEFPLNVTTSGNSVNVSSGLVNTSISGTVYTDNQLAIYQIDSVLKPIGVF 182

Query: 182 QPRPPPPAPAPEKSKKKAKAISENPKDSTDDNSSAVPLAGMSAFFTGAAAVAGIMLVWIN 241
           QPRPPPPAPAPEKSKKKAK  SE+PKDS DDNSSAVPLAG+S   TGAA V GIMLVWIN
Sbjct: 183 QPRPPPPAPAPEKSKKKAKGNSESPKDSDDDNSSAVPLAGVSVISTGAAVVVGIMLVWIN 242

Query: 242 T 243
           +
Sbjct: 243 S 243

[Close]

BLAST of CmoCh13G001870.1 vs. NCBI nr
Match: XP_022964662.1 (fasciclin-like arabinogalactan protein 12 [Cucurbita moschata])

HSP 1 Score: 461.5 bits (1186), Expect = 4.6e-126
Identity = 242/242 (100.00%), Postives = 242/242 (100.00%), Query Frame = 0


Query: 1   MNTLFSLIIFFLYLFVGGSYGQSPAEAPGPPPPMNISRILEKGGQFSILIRLLKSTQVAN 60
           MNTLFSLIIFFLYLFVGGSYGQSPAEAPGPPPPMNISRILEKGGQFSILIRLLKSTQVAN
Sbjct: 1   MNTLFSLIIFFLYLFVGGSYGQSPAEAPGPPPPMNISRILEKGGQFSILIRLLKSTQVAN 60

Query: 61  QINTQLNDSNSELTIFAPTDNAFSNLQSGTLNSLNDQEKVELLQFHMIPTFLSLSNFQTV 120
           QINTQLNDSNSELTIFAPTDNAFSNLQSGTLNSLNDQEKVELLQFHMIPTFLSLSNFQTV
Sbjct: 61  QINTQLNDSNSELTIFAPTDNAFSNLQSGTLNSLNDQEKVELLQFHMIPTFLSLSNFQTV 120

Query: 121 SNPVRTQAGDAYEFPLNVTTSGNSVNVSSGLTNTSISGTVYSDNQLAVYQIDSVLKPIGV 180
           SNPVRTQAGDAYEFPLNVTTSGNSVNVSSGLTNTSISGTVYSDNQLAVYQIDSVLKPIGV
Sbjct: 121 SNPVRTQAGDAYEFPLNVTTSGNSVNVSSGLTNTSISGTVYSDNQLAVYQIDSVLKPIGV 180

Query: 181 FQPRPPPPAPAPEKSKKKAKAISENPKDSTDDNSSAVPLAGMSAFFTGAAAVAGIMLVWI 240
           FQPRPPPPAPAPEKSKKKAKAISENPKDSTDDNSSAVPLAGMSAFFTGAAAVAGIMLVWI
Sbjct: 181 FQPRPPPPAPAPEKSKKKAKAISENPKDSTDDNSSAVPLAGMSAFFTGAAAVAGIMLVWI 240

Query: 241 NT 243
           NT
Sbjct: 241 NT 242

[Close]

BLAST of CmoCh13G001870.1 vs. NCBI nr
Match: KAG6583491.1 (Fasciclin-like arabinogalactan protein 11, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 459.5 bits (1181), Expect = 1.8e-125
Identity = 241/242 (99.59%), Postives = 242/242 (100.00%), Query Frame = 0


Query: 1   MNTLFSLIIFFLYLFVGGSYGQSPAEAPGPPPPMNISRILEKGGQFSILIRLLKSTQVAN 60
           MNTLFSLIIFFLYLFVGGSYGQSPAEAPGPPPPMNISRILEKGGQFSILIRLLKSTQVAN
Sbjct: 1   MNTLFSLIIFFLYLFVGGSYGQSPAEAPGPPPPMNISRILEKGGQFSILIRLLKSTQVAN 60

Query: 61  QINTQLNDSNSELTIFAPTDNAFSNLQSGTLNSLNDQEKVELLQFHMIPTFLSLSNFQTV 120
           QINTQLNDSNSELTIFAPTDNAFSNLQSGTLNSLNDQEKVELLQFHMIPTFLSLSNFQTV
Sbjct: 61  QINTQLNDSNSELTIFAPTDNAFSNLQSGTLNSLNDQEKVELLQFHMIPTFLSLSNFQTV 120

Query: 121 SNPVRTQAGDAYEFPLNVTTSGNSVNVSSGLTNTSISGTVYSDNQLAVYQIDSVLKPIGV 180
           SNPVRTQAGDAYEFPLNVTTSGNSVNVSSGLTNTSISGTVYSDNQLAVYQIDSVLKPIGV
Sbjct: 121 SNPVRTQAGDAYEFPLNVTTSGNSVNVSSGLTNTSISGTVYSDNQLAVYQIDSVLKPIGV 180

Query: 181 FQPRPPPPAPAPEKSKKKAKAISENPKDSTDDNSSAVPLAGMSAFFTGAAAVAGIMLVWI 240
           FQPRPPPPAPAPEKSKKKAKAISE+PKDSTDDNSSAVPLAGMSAFFTGAAAVAGIMLVWI
Sbjct: 181 FQPRPPPPAPAPEKSKKKAKAISEDPKDSTDDNSSAVPLAGMSAFFTGAAAVAGIMLVWI 240

Query: 241 NT 243
           NT
Sbjct: 241 NT 242

[Close]

BLAST of CmoCh13G001870.1 vs. NCBI nr
Match: XP_023519822.1 (fasciclin-like arabinogalactan protein 12 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 455.3 bits (1170), Expect = 3.3e-124
Identity = 237/242 (97.93%), Postives = 242/242 (100.00%), Query Frame = 0


Query: 1   MNTLFSLIIFFLYLFVGGSYGQSPAEAPGPPPPMNISRILEKGGQFSILIRLLKSTQVAN 60
           MN+LFSL+IFFLYLFVGGSYGQSPAEAPGPPPPMNISRILEKGGQFSILIRLLKSTQVAN
Sbjct: 1   MNSLFSLVIFFLYLFVGGSYGQSPAEAPGPPPPMNISRILEKGGQFSILIRLLKSTQVAN 60

Query: 61  QINTQLNDSNSELTIFAPTDNAFSNLQSGTLNSLNDQEKVELLQFHMIPTFLSLSNFQTV 120
           QINTQLNDSNSELTIFAPTDNAFSNLQSGTLNSLNDQEKVELLQFHMIPTFLSLSNFQTV
Sbjct: 61  QINTQLNDSNSELTIFAPTDNAFSNLQSGTLNSLNDQEKVELLQFHMIPTFLSLSNFQTV 120

Query: 121 SNPVRTQAGDAYEFPLNVTTSGNSVNVSSGLTNTSISGTVYSDNQLAVYQIDSVLKPIGV 180
           SNPVRTQAGDAYEFPLNVTTSGNSVNVSSGLTNTSISGTVYSDNQLAVYQIDSVLKPIG+
Sbjct: 121 SNPVRTQAGDAYEFPLNVTTSGNSVNVSSGLTNTSISGTVYSDNQLAVYQIDSVLKPIGI 180

Query: 181 FQPRPPPPAPAPEKSKKKAKAISENPKDSTDDNSSAVPLAGMSAFFTGAAAVAGIMLVWI 240
           FQPRPPPPAPAPEKSKKKAKAISE+PKDST+DNSSAVPLAGMSAFFTGAAAVAGIMLVWI
Sbjct: 181 FQPRPPPPAPAPEKSKKKAKAISEDPKDSTNDNSSAVPLAGMSAFFTGAAAVAGIMLVWI 240

Query: 241 NT 243
           NT
Sbjct: 241 NT 242

[Close]

BLAST of CmoCh13G001870.1 vs. NCBI nr
Match: XP_022970427.1 (fasciclin-like arabinogalactan protein 12 [Cucurbita maxima])

HSP 1 Score: 453.0 bits (1164), Expect = 1.6e-123
Identity = 237/242 (97.93%), Postives = 239/242 (98.76%), Query Frame = 0


Query: 1   MNTLFSLIIFFLYLFVGGSYGQSPAEAPGPPPPMNISRILEKGGQFSILIRLLKSTQVAN 60
           MNTLFSLIIFFLYLFVGGS+GQSPAEAPGPPPPMNISRILEKGGQFSILIRLLKSTQVAN
Sbjct: 1   MNTLFSLIIFFLYLFVGGSFGQSPAEAPGPPPPMNISRILEKGGQFSILIRLLKSTQVAN 60

Query: 61  QINTQLNDSNSELTIFAPTDNAFSNLQSGTLNSLNDQEKVELLQFHMIPTFLSLSNFQTV 120
           QINTQLNDSNSELTIFAPTDNAFSNLQSGTLNSLNDQEKVELLQFHMIPTFLSLSNFQTV
Sbjct: 61  QINTQLNDSNSELTIFAPTDNAFSNLQSGTLNSLNDQEKVELLQFHMIPTFLSLSNFQTV 120

Query: 121 SNPVRTQAGDAYEFPLNVTTSGNSVNVSSGLTNTSISGTVYSDNQLAVYQIDSVLKPIGV 180
           SNPVRTQAGDAYEFPLNVTTSGNSVNVSSGLTNTSISGTVYSDNQLAVYQIDSVLKPIGV
Sbjct: 121 SNPVRTQAGDAYEFPLNVTTSGNSVNVSSGLTNTSISGTVYSDNQLAVYQIDSVLKPIGV 180

Query: 181 FQPRPPPPAPAPEKSKKKAKAISENPKDSTDDNSSAVPLAGMSAFFTGAAAVAGIMLVWI 240
           FQPRPPPPAPAPEKSKKKAKAISE+PKDSTDDNSSAVPL GM  FFTGAAAVAGIMLVWI
Sbjct: 181 FQPRPPPPAPAPEKSKKKAKAISEDPKDSTDDNSSAVPLTGMPVFFTGAAAVAGIMLVWI 240

Query: 241 NT 243
           NT
Sbjct: 241 NT 242

[Close]

BLAST of CmoCh13G001870.1 vs. NCBI nr
Match: KAG7019247.1 (Fasciclin-like arabinogalactan protein 11, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 448.0 bits (1151), Expect = 5.3e-122
Identity = 236/237 (99.58%), Postives = 237/237 (100.00%), Query Frame = 0


Query: 1   MNTLFSLIIFFLYLFVGGSYGQSPAEAPGPPPPMNISRILEKGGQFSILIRLLKSTQVAN 60
           MNTLFSLIIFFLYLFVGGSYGQSPAEAPGPPPPMNISRILEKGGQFSILIRLLKSTQVAN
Sbjct: 1   MNTLFSLIIFFLYLFVGGSYGQSPAEAPGPPPPMNISRILEKGGQFSILIRLLKSTQVAN 60

Query: 61  QINTQLNDSNSELTIFAPTDNAFSNLQSGTLNSLNDQEKVELLQFHMIPTFLSLSNFQTV 120
           QINTQLNDSNSELTIFAPTDNAFSNLQSGTLNSLNDQEKVELLQFHMIPTFLSLSNFQTV
Sbjct: 61  QINTQLNDSNSELTIFAPTDNAFSNLQSGTLNSLNDQEKVELLQFHMIPTFLSLSNFQTV 120

Query: 121 SNPVRTQAGDAYEFPLNVTTSGNSVNVSSGLTNTSISGTVYSDNQLAVYQIDSVLKPIGV 180
           SNPVRTQAGDAYEFPLNVTTSGNSVNVSSGLTNTSISGTVYSDNQLAVYQIDSVLKPIGV
Sbjct: 121 SNPVRTQAGDAYEFPLNVTTSGNSVNVSSGLTNTSISGTVYSDNQLAVYQIDSVLKPIGV 180

Query: 181 FQPRPPPPAPAPEKSKKKAKAISENPKDSTDDNSSAVPLAGMSAFFTGAAAVAGIML 238
           FQPRPPPPAPAPEKSKKKAKAISE+PKDSTDDNSSAVPLAGMSAFFTGAAAVAGIML
Sbjct: 181 FQPRPPPPAPAPEKSKKKAKAISEDPKDSTDDNSSAVPLAGMSAFFTGAAAVAGIML 237

[Close]

BLAST of CmoCh13G001870.1 vs. TAIR 10
Match: AT5G60490.1 (FASCICLIN-like arabinogalactan-protein 12 )

HSP 1 Score: 236.1 bits (601), Expect = 2.9e-62
Identity = 129/221 (58.37%), Postives = 168/221 (76.02%), Query Frame = 0


Query: 23  SPAEAPGPPPPMNISRILEKGGQFSILIRLLKSTQVANQINTQLNDSNSELTIFAPTDNA 82
           SPA AP PP P N+++ILEK GQF++ IRLLKST VANQ+  QLN+S++ +TIFAP+D++
Sbjct: 27  SPAVAPAPPGPTNVTKILEKAGQFTVFIRLLKSTGVANQLYGQLNNSDNGITIFAPSDSS 86

Query: 83  FSNLQSGTLNSLNDQEKVELLQFHMIPTFLSLSNFQTVSNPVRTQAGDAYE--FPLNVTT 142
           F+ L++GTLNSL D+++VEL+QFH+IP+++S SNFQT+SNP+RTQAGD+ +  FPLNVTT
Sbjct: 87  FTGLKAGTLNSLTDEQQVELIQFHVIPSYVSSSNFQTISNPLRTQAGDSADGHFPLNVTT 146

Query: 143 SGNSVNVSSGLTNTSISGTVYSDNQLAVYQIDSVLKPIGVFQPRPPPPAPAP--EKSKKK 202
           SGN+VN++SG+TNT++SG VYSD QLAVYQ+D VL P  VF PRPP PAPAP   KSKKK
Sbjct: 147 SGNTVNITSGVTNTTVSGNVYSDGQLAVYQVDKVLLPQQVFDPRPPAPAPAPSVSKSKKK 206

Query: 203 AKAISENPKDSTDDNSSAVPLAGMSAFFTGAAAVAGIMLVW 240
                 +  DS  D S A+   G S     +  V  +ML W
Sbjct: 207 KDDSDSSSDDSPADASFALRNVG-SVCDAVSFCVMSVMLAW 246

[Close]

BLAST of CmoCh13G001870.1 vs. TAIR 10
Match: AT5G03170.1 (FASCICLIN-like arabinogalactan-protein 11 )

HSP 1 Score: 219.9 bits (559), Expect = 2.2e-57
Identity = 123/238 (51.68%), Postives = 171/238 (71.85%), Query Frame = 0


Query: 9   IFFLYLFVGGSYGQSPAEAPGPPPPMNISRILEKGGQFSILIRLLKSTQVANQINTQLND 68
           +F  +L +  +YGQ+P  APGP  P NI+ ILEK GQF++ IRLLKSTQ ++QINTQLN 
Sbjct: 12  LFIFFLVIATTYGQAP--APGPSGPTNITAILEKAGQFTLFIRLLKSTQASDQINTQLNS 71

Query: 69  SNSE-LTIFAPTDNAFSNLQSGTLNSLNDQEKVELLQFHMIPTFLSLSNFQTVSNPVRTQ 128
           S+S  LT+FAPTDNAF++L+SGTLNSL+DQ+KV+L+QFH++PT +++  FQTVSNP+RTQ
Sbjct: 72  SSSNGLTVFAPTDNAFNSLKSGTLNSLSDQQKVQLVQFHVLPTLITMPQFQTVSNPLRTQ 131

Query: 129 AGDAY--EFPLNVTTSGNSVNVSSGLTNTSISGTVYSDNQLAVYQIDSVLKPIGVFQPRP 188
           AGD    +FPLN+T+SGN VN+++G+ + +++ +VYSD QLAVYQ+D VL P+ +F    
Sbjct: 132 AGDGQNGKFPLNITSSGNQVNITTGVVSATVANSVYSDKQLAVYQVDQVLLPLAMF-GSS 191

Query: 189 PPPAPAPEKSKKKAKAIS---ENPKDSTDDNSSAVPLAGMSAFFTGAAAVAGIMLVWI 241
             PAPAPEK    +K  +   ++  DSTD + +     G     T  AA+A    +WI
Sbjct: 192 VAPAPAPEKGGSVSKGSASGGDDGGDSTDSSDAERTGFGFGIRITTVAAIAASSSLWI 246

[Close]

BLAST of CmoCh13G001870.1 vs. TAIR 10
Match: AT5G44130.1 (FASCICLIN-like arabinogalactan protein 13 precursor )

HSP 1 Score: 160.6 bits (405), Expect = 1.6e-39
Identity = 96/212 (45.28%), Postives = 134/212 (63.21%), Query Frame = 0


Query: 22  QSPAEAPGPPPPMNISRILEKGGQFSILIRLLKSTQVANQINTQLNDSNSELTIFAPTDN 81
           Q  A APGP  P+NI+ ILEKGGQF  LIRLL +TQ+ NQIN Q+N S+  +T+ APTDN
Sbjct: 23  QRAAPAPGPAGPINITAILEKGGQFVTLIRLLNTTQIGNQINIQINSSSEGMTVLAPTDN 82

Query: 82  AFSNLQSGTLNSLNDQEKVELLQFHMIPTFLSLSNFQTVSNPVRTQAGD---AYEFPLNV 141
           AF NL+ GTLN L+  ++V+L+ +H+ P F +L +  +VSNPVRTQA        + LN 
Sbjct: 83  AFQNLKPGTLNKLSPDDQVKLILYHVSPKFYTLEDLLSVSNPVRTQASGRDVGGVYGLNF 142

Query: 142 TTSGNSVNVSSGLTNTSISGTVYSDNQLAVYQIDSVLKPIGVFQPR------PPPPAPAP 201
           T  GN VNVS+G+  T +S ++  +  LAVY +D VL P  +F  R      PPP + +P
Sbjct: 143 TGQGNQVNVSTGVVETRLSTSLRQERPLAVYVVDMVLLPEEMFGERKISPMAPPPKSKSP 202

Query: 202 E-----KSKKKAKAISENPKDSTDDNSSAVPL 220
           +     +S KKA A SE+ K  + + ++ + L
Sbjct: 203 DVSDDSESSKKAAAPSESEKSGSGEMNTGLGL 234

[Close]

BLAST of CmoCh13G001870.1 vs. TAIR 10
Match: AT2G20520.1 (FASCICLIN-like arabinogalactan 6 )

HSP 1 Score: 147.5 bits (371), Expect = 1.4e-35
Identity = 98/224 (43.75%), Postives = 135/224 (60.27%), Query Frame = 0


Query: 2   NTLFSLIIFFLYLFVGGSYGQSPAEAPGP---PPPMNISRILEKGGQFSILIRLLKSTQV 61
           ++LFS ++  ++LF    Y QS   AP P     P+N++ ILE G QF+ LI+LL +TQV
Sbjct: 3   SSLFSYVVLLIFLFT-IPYIQSQPTAPAPTTEKSPINLTAILEAGHQFTTLIQLLNTTQV 62

Query: 62  ANQINTQLNDSNSELTIFAPTDNAFSNLQSGTLNSLNDQEKVELLQFHMIPTFLSLSNFQ 121
             Q++ QLN S+  +TIFAPTDNAF+ L+ GTLNSL  Q++++L+ +H+IP + SLS+  
Sbjct: 63  GFQVSVQLNSSDQGMTIFAPTDNAFNKLKPGTLNSLTYQQQIQLMLYHIIPKYYSLSDLL 122

Query: 122 TVSNPVRTQA--GDAYEFPLNVT--TSGNSVNVSSGLTNTSISGTVYSDNQLAVYQIDSV 181
             SNPVRTQA   D   F LN T     N VNVS+G+  T I+  +     LAVY +DSV
Sbjct: 123 LASNPVRTQATGQDGGVFGLNFTGQAQSNQVNVSTGVVETRINNALRQQFPLAVYVVDSV 182

Query: 182 LKPIGVFQPRPPPP-APAPEKSKKKAKAISENPKDSTDDNSSAV 218
           L P  +F  +  P  APAP+ S   + A S    D      S+V
Sbjct: 183 LLPEELFGTKTTPTGAPAPKSSTSSSDADSPAADDEHKSAGSSV 225

[Close]

BLAST of CmoCh13G001870.1 vs. TAIR 10
Match: AT1G03870.1 (FASCICLIN-like arabinoogalactan 9 )

HSP 1 Score: 146.0 bits (367), Expect = 4.0e-35
Identity = 92/219 (42.01%), Postives = 131/219 (59.82%), Query Frame = 0


Query: 3   TLFSLIIFFLYLFVGGSYGQSPAEAPGPPPPMNISRILEKGGQFSILIRLLKSTQVANQI 62
           TL  L++    L    +  Q  A AP P  P+N++ ILEKGGQF+  I LL  TQV +Q+
Sbjct: 7   TLAPLLLIAAVLLATKATAQPAAPAPEPAGPINLTAILEKGGQFTTFIHLLNITQVGSQV 66

Query: 63  NTQLNDSNSELTIFAPTDNAFSNLQSGTLNSLNDQEKVELLQFHMIPTFLSLSNFQTVSN 122
           N Q+N S+  +T+FAPTDNAF NL+ GTLN L+  ++V+L+ +H+ P + S+ +  +VSN
Sbjct: 67  NIQVNSSSEGMTVFAPTDNAFQNLKPGTLNQLSPDDQVKLILYHVSPKYYSMDDLLSVSN 126

Query: 123 PVRTQAG--DAYEFPLNVTTSGNSVNVSSGLTNTSISGTVYSDNQLAVYQIDSVLKPIGV 182
           PVRTQA   D   + LN T   N +NVS+G   T IS ++     LAVY +D VL P  +
Sbjct: 127 PVRTQASGRDNGVYGLNFTGQTNQINVSTGYVETRISNSLRQQRPLAVYVVDMVLLPGEM 186

Query: 183 F-QPRPPPPAPAPEKSKKKAKAISENPKDSTDDNSSAVP 219
           F + +  P APAP   K K+  +++   DS     +A P
Sbjct: 187 FGEHKLSPIAPAP---KSKSGGVTD---DSGSTKKAASP 219

The following BLAST results are available for this feature:

BLAST of CmoCh13G001870.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LEE9	4.1e-61	58.37	Fasciclin-like arabinogalactan protein 12 OS=Arabidopsis thaliana OX=3702 GN=FLA...	[more]
Q8LEJ6	3.1e-56	51.68	Fasciclin-like arabinogalactan protein 11 OS=Arabidopsis thaliana OX=3702 GN=FLA...	[more]
Q9FFH6	2.2e-38	45.28	Fasciclin-like arabinogalactan protein 13 OS=Arabidopsis thaliana OX=3702 GN=FLA...	[more]
Q9SIL7	1.9e-34	43.75	Fasciclin-like arabinogalactan protein 6 OS=Arabidopsis thaliana OX=3702 GN=FLA6...	[more]
Q9ZWA8	5.6e-34	42.01	Fasciclin-like arabinogalactan protein 9 OS=Arabidopsis thaliana OX=3702 GN=FLA9...	[more]

BLAST of CmoCh13G001870.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HIC8	2.2e-126	100.00	fasciclin-like arabinogalactan protein 12 OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]
A0A6J1HZ28	7.9e-124	97.93	fasciclin-like arabinogalactan protein 12 OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]
A0A5A7UNV5	8.2e-113	88.38	Fasciclin-like arabinogalactan protein 12 OS=Cucumis melo var. makuwa OX=1194695...	[more]
A0A1S3CKI9	8.2e-113	88.38	fasciclin-like arabinogalactan protein 12 OS=Cucumis melo OX=3656 GN=LOC10350184...	[more]
A0A0A0LVA0	4.5e-111	87.14	Arabinogalactan protein 2 OS=Cucumis sativus OX=3659 GN=Csa_1G085380 PE=3 SV=1	[more]

BLAST of CmoCh13G001870.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022964662.1	4.6e-126	100.00	fasciclin-like arabinogalactan protein 12 [Cucurbita moschata]	[more]
KAG6583491.1	1.8e-125	99.59	Fasciclin-like arabinogalactan protein 11, partial [Cucurbita argyrosperma subsp...	[more]
XP_023519822.1	3.3e-124	97.93	fasciclin-like arabinogalactan protein 12 [Cucurbita pepo subsp. pepo]	[more]
XP_022970427.1	1.6e-123	97.93	fasciclin-like arabinogalactan protein 12 [Cucurbita maxima]	[more]
KAG7019247.1	5.3e-122	99.58	Fasciclin-like arabinogalactan protein 11, partial [Cucurbita argyrosperma subsp...	[more]

BLAST of CmoCh13G001870.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G60490.1	2.9e-62	58.37	FASCICLIN-like arabinogalactan-protein 12	[more]
AT5G03170.1	2.2e-57	51.68	FASCICLIN-like arabinogalactan-protein 11	[more]
AT5G44130.1	1.6e-39	45.28	FASCICLIN-like arabinogalactan protein 13 precursor	[more]
AT2G20520.1	1.4e-35	43.75	FASCICLIN-like arabinogalactan 6	[more]
AT1G03870.1	4.0e-35	42.01	FASCICLIN-like arabinoogalactan 9	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000782	FAS1 domain	SMART	SM00554	fasc_3	coord: 74..178 e-value: 6.8E-21 score: 85.4
IPR000782	FAS1 domain	PFAM	PF02469	Fasciclin	coord: 45..177 e-value: 2.6E-22 score: 79.4
IPR000782	FAS1 domain	PROSITE	PS50213	FAS1	coord: 33..175 score: 21.606537
IPR036378	FAS1 domain superfamily	GENE3D	2.30.180.10	FAS1 domain	coord: 21..177 e-value: 9.9E-21 score: 76.6
IPR036378	FAS1 domain superfamily	SUPERFAMILY	82153	FAS1 domain	coord: 28..177
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 180..215
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 191..207
None	No IPR available	PANTHER	PTHR32077:SF38	FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 12	coord: 5..233
IPR045003	Fasciclin-like arabinogalactan protein, group A	PANTHER	PTHR32077	FASCICLIN-LIKE ARABINOGALACTAN PROTEIN	coord: 5..233

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmoCh13G001870	CmoCh13G001870	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh13G001870.1:exon:7443	CmoCh13G001870.1:exon:7443	exon
CmoCh13G001870.1:exon:7444	CmoCh13G001870.1:exon:7444	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh13G001870.1:five_prime_utr	CmoCh13G001870.1:five_prime_utr	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh13G001870.1:cds	CmoCh13G001870.1:cds	CDS
CmoCh13G001870.1:cds	CmoCh13G001870.1:cds_2	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh13G001870.1:three_prime_utr	CmoCh13G001870.1:three_prime_utr	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmoCh13G001870.1	CmoCh13G001870.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009834	plant-type secondary cell wall biogenesis
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane