CmoCh13G001570.1 (mRNA) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh13G001570.1
Type	mRNA
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Protein of unknown function (DUF1635)
Location	Cmo_Chr13: 991083 .. 991856 (+)
Sequence length	582
RNA-Seq Expression	CmoCh13G001570.1
Synteny	CmoCh13G001570.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCTTCAATTTCTTCTCCAAGCATTCATCAATGGAAGATTTGGGCTATCTCTGGAGCTACCAAGAGGTTCTTCCCATCTTTTTCTCTCTGTTTTTCGTCTCTAAATTGCATTTTCGTTCATGGGTCGAACAAATTCGAAACAAAAACATGTTTTTTTCATCTGGGTTTTCCTTGATCTGAATCTACAGGGCATTGATGAGCTAAAACAGAGGCTTCTCTGCACGACAATTGAGCTCGAATCAGTAAAAATGGCGGCCAATCAAGAACTGACAGAAAACAAACAGAATCTAAAGAATCTCTTCAATCTTCTTCAAATTGCTTATAAAGAAAGAGACGAAGCAAAGAATCAGCTTCAGAAAGTCTTGAATAGTGCAAATTCCGGCATTACTGAGTCCAATAGCCTCTCCGGCGGCGGCGGCTCCGACGCCGCCGTTTCGTCGCCGGATTTCTCGAGCGTTGGGGATCCGGTGATTGAGAATATTGTGAAGGGGAAGAAGCTGCCGGAGAAGGGGAGGTTGTTGCAGGCTGTGATGGAAGCAGGGCCGTTGCTTCAGACGCTGCTTGTGGCGGGGCCGCTACCTCGGTGGCGGAATCCGCCGCCGGTGCAGTCGTTGAAGGTTGTTCCTCCGCCTTTTTTGATTAATAACAATCCAAGAATATGTTCGAATTCTATGATGAACTTGTCAGATTCTTACAGTTTTGGGTCTCAGTTTCAGTCTACGAAGAGACAGAGATTACATTGATGTTCATATCATTGCTTATACTCTATTGTAA

mRNA sequence

TTCTTCAATTTCTTCTCCAAGCATTCATCAATGGAAGATTTGGGCTATCTCTGGAGCTACCAAGAGGGCATTGATGAGCTAAAACAGAGGCTTCTCTGCACGACAATTGAGCTCGAATCAGTAAAAATGGCGGCCAATCAAGAACTGACAGAAAACAAACAGAATCTAAAGAATCTCTTCAATCTTCTTCAAATTGCTTATAAAGAAAGAGACGAAGCAAAGAATCAGCTTCAGAAAGTCTTGAATAGTGCAAATTCCGGCATTACTGAGTCCAATAGCCTCTCCGGCGGCGGCGGCTCCGACGCCGCCGTTTCGTCGCCGGATTTCTCGAGCGTTGGGGATCCGGTGATTGAGAATATTGTGAAGGGGAAGAAGCTGCCGGAGAAGGGGAGGTTGTTGCAGGCTGTGATGGAAGCAGGGCCGTTGCTTCAGACGCTGCTTGTGGCGGGGCCGCTACCTCGGTGGCGGAATCCGCCGCCGGTGCAGTCGTTGAAGATTCTTACAGTTTTGGGTCTCAGTTTCAGTCTACGAAGAGACAGAGATTACATTGATGTTCATATCATTGCTTATACTCTATTGTAA

Coding sequence (CDS)

ATGGAAGATTTGGGCTATCTCTGGAGCTACCAAGAGGGCATTGATGAGCTAAAACAGAGGCTTCTCTGCACGACAATTGAGCTCGAATCAGTAAAAATGGCGGCCAATCAAGAACTGACAGAAAACAAACAGAATCTAAAGAATCTCTTCAATCTTCTTCAAATTGCTTATAAAGAAAGAGACGAAGCAAAGAATCAGCTTCAGAAAGTCTTGAATAGTGCAAATTCCGGCATTACTGAGTCCAATAGCCTCTCCGGCGGCGGCGGCTCCGACGCCGCCGTTTCGTCGCCGGATTTCTCGAGCGTTGGGGATCCGGTGATTGAGAATATTGTGAAGGGGAAGAAGCTGCCGGAGAAGGGGAGGTTGTTGCAGGCTGTGATGGAAGCAGGGCCGTTGCTTCAGACGCTGCTTGTGGCGGGGCCGCTACCTCGGTGGCGGAATCCGCCGCCGGTGCAGTCGTTGAAGATTCTTACAGTTTTGGGTCTCAGTTTCAGTCTACGAAGAGACAGAGATTACATTGATGTTCATATCATTGCTTATACTCTATTGTAA

Protein sequence

MEDLGYLWSYQEGIDELKQRLLCTTIELESVKMAANQELTENKQNLKNLFNLLQIAYKERDEAKNQLQKVLNSANSGITESNSLSGGGGSDAAVSSPDFSSVGDPVIENIVKGKKLPEKGRLLQAVMEAGPLLQTLLVAGPLPRWRNPPPVQSLKILTVLGLSFSLRRDRDYIDVHIIAYTLL

Homology

[Close]

BLAST of CmoCh13G001570.1 vs. ExPASy TrEMBL
Match: A0A6J1HIS9 (uncharacterized protein LOC111464824 OS=Cucurbita moschata OX=3662 GN=LOC111464824 PE=4 SV=1)

HSP 1 Score: 300.4 bits (768), Expect = 5.0e-78
Identity = 155/157 (98.73%), Postives = 157/157 (100.00%), Query Frame = 0


Query: 1   MEDLGYLWSYQEGIDELKQRLLCTTIELESVKMAANQELTENKQNLKNLFNLLQIAYKER 60
           MEDLGYLWSYQEGIDELKQRLLCTTIELESVKMAANQELTENKQNLKNLFNLLQIAYKER
Sbjct: 1   MEDLGYLWSYQEGIDELKQRLLCTTIELESVKMAANQELTENKQNLKNLFNLLQIAYKER 60

Query: 61  DEAKNQLQKVLNSANSGITESNSLSGGGGSDAAVSSPDFSSVGDPVIENIVKGKKLPEKG 120
           DEAKNQLQKVLNSANSGITESNSLSGGGGSDAAVSSPDFSSVGDPVIENIVKGKKLPEKG
Sbjct: 61  DEAKNQLQKVLNSANSGITESNSLSGGGGSDAAVSSPDFSSVGDPVIENIVKGKKLPEKG 120

Query: 121 RLLQAVMEAGPLLQTLLVAGPLPRWRNPPPVQSLKIL 158
           RLLQAVMEAGPLLQTLLVAGPLPRWRNPPPVQSLK++
Sbjct: 121 RLLQAVMEAGPLLQTLLVAGPLPRWRNPPPVQSLKVV 157

[Close]

BLAST of CmoCh13G001570.1 vs. ExPASy TrEMBL
Match: A0A6J1I0P4 (uncharacterized protein LOC111469445 OS=Cucurbita maxima OX=3661 GN=LOC111469445 PE=4 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 1.1e-69
Identity = 144/157 (91.72%), Postives = 148/157 (94.27%), Query Frame = 0


Query: 1   MEDLGYLWSYQEGIDELKQRLLCTTIELESVKMAANQELTENKQNLKNLFNLLQIAYKER 60
           MEDLGYLWSYQEGIDELKQRLL TTIELESVKMAANQE+TENKQNLKNLFNLLQIAYKER
Sbjct: 1   MEDLGYLWSYQEGIDELKQRLLYTTIELESVKMAANQEITENKQNLKNLFNLLQIAYKER 60

Query: 61  DEAKNQLQKVLNSANSGITESNSLSGGGGSDAAVSSPDFSSVGDPVIENIVKGKKLPEKG 120
           DEAKNQLQKVLN ANSGI+ESNSL     SDAAVSSPDFSSVGDPVIEN VKGKKLPEKG
Sbjct: 61  DEAKNQLQKVLNKANSGISESNSL-----SDAAVSSPDFSSVGDPVIENFVKGKKLPEKG 120

Query: 121 RLLQAVMEAGPLLQTLLVAGPLPRWRNPPPVQSLKIL 158
           RLLQAVMEAGPLLQTLLVAGPLPRWRNPP VQSLK++
Sbjct: 121 RLLQAVMEAGPLLQTLLVAGPLPRWRNPPQVQSLKVV 152

[Close]

BLAST of CmoCh13G001570.1 vs. ExPASy TrEMBL
Match: A0A5A7STR2 (TPRXL protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold49G00650 PE=4 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 2.2e-49
Identity = 126/199 (63.32%), Postives = 141/199 (70.85%), Query Frame = 0


Query: 1   MEDLGYLWSY-QEGIDELKQRLLCTTIELESVKMAANQELTENKQNLKNLFNLLQIAYKE 60
           MED   LWSY QEG+DEL+Q+LL TTIELESVKM ANQE+ +NK+N+KNL NLLQ+AYKE
Sbjct: 1   MEDFASLWSYHQEGVDELRQKLLYTTIELESVKMEANQEMIKNKENVKNLLNLLQLAYKE 60

Query: 61  RDEAKNQLQKVLN-----------SANSGITESNSLSGGGGSD----------------- 120
           RDEAKNQL KVLN            ANS ITESNSLS    ++                 
Sbjct: 61  RDEAKNQLHKVLNKLNFQPESPLIKANSSITESNSLSADNNNNSNTFNNISGSPVVDSFF 120

Query: 121 --AAVSSP-DFSS--VGDP--------VIENIVKGKKLPEKGRLLQAVMEAGPLLQTLLV 158
             AAVSSP DFSS  VGD         VIE+IVKGKKLPEKGRLLQ+VMEAGPLLQTLLV
Sbjct: 121 DAAAVSSPTDFSSFNVGDSHNVDQCSLVIESIVKGKKLPEKGRLLQSVMEAGPLLQTLLV 180

[Close]

BLAST of CmoCh13G001570.1 vs. ExPASy TrEMBL
Match: A0A6J1KHI5 (uncharacterized protein LOC111493292 OS=Cucurbita maxima OX=3661 GN=LOC111493292 PE=4 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 2.8e-49
Identity = 125/201 (62.19%), Postives = 140/201 (69.65%), Query Frame = 0


Query: 1   MEDLGYLWSYQEGIDELKQRLLCTTIELESVKMAANQELTENKQNLKNLFNLLQIAYKER 60
           MED   LW+YQEG+DE+KQ+LLC TIELES KM ANQE+ +NK+++KNL NLLQ+AY+ER
Sbjct: 26  MEDFDSLWTYQEGLDEIKQKLLCATIELESAKMEANQEMMKNKESVKNLMNLLQMAYRER 85

Query: 61  DEAKNQLQKVLN---------------SANSGITESNSLS-------------GGGGSDA 120
           DEAKNQLQKVLN                ANS ITESNSLS             G    D+
Sbjct: 86  DEAKNQLQKVLNELMLTSHFQAESPVGKANSSITESNSLSADTFNNNPQSQSLGSPVVDS 145

Query: 121 ---AVSSPDFSS--VGDP--------VIENIVKGKKLPEKGRLLQAVMEAGPLLQTLLVA 161
              AVSS DFSS  VGD         VIENIVKGKKLPEKGRLLQ+VMEAGPLLQTLLVA
Sbjct: 146 FFDAVSSTDFSSLNVGDSYNVDPCGLVIENIVKGKKLPEKGRLLQSVMEAGPLLQTLLVA 205

[Close]

BLAST of CmoCh13G001570.1 vs. ExPASy TrEMBL
Match: A0A6J1GCY4 (uncharacterized protein LOC111452838 OS=Cucurbita moschata OX=3662 GN=LOC111452838 PE=4 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 2.8e-49
Identity = 125/201 (62.19%), Postives = 140/201 (69.65%), Query Frame = 0


Query: 1   MEDLGYLWSYQEGIDELKQRLLCTTIELESVKMAANQELTENKQNLKNLFNLLQIAYKER 60
           MED   LW+YQ+G+DE+KQ+LLC TIELES KM ANQE+ +NK+++KNL NLLQ+AYKER
Sbjct: 1   MEDFDSLWTYQQGLDEIKQKLLCATIELESAKMEANQEMMKNKESVKNLMNLLQMAYKER 60

Query: 61  DEAKNQLQKVLN---------------SANSGITESNSLS-------------GGGGSDA 120
           DEAKNQLQKVLN                ANS ITESNSLS             G    D+
Sbjct: 61  DEAKNQLQKVLNELMLTSHFQAESPVGKANSSITESNSLSADTFNNNPQSQSLGSPVVDS 120

Query: 121 ---AVSSPDFSS--VGDP--------VIENIVKGKKLPEKGRLLQAVMEAGPLLQTLLVA 161
              AVSS DFSS  VGD         VIENIVKGKKLPEKGRLLQ+VMEAGPLLQTLLVA
Sbjct: 121 FFDAVSSTDFSSLNVGDSYNVDPCGLVIENIVKGKKLPEKGRLLQSVMEAGPLLQTLLVA 180

[Close]

BLAST of CmoCh13G001570.1 vs. NCBI nr
Match: XP_022964842.1 (uncharacterized protein LOC111464824 [Cucurbita moschata] >KAG7019218.1 hypothetical protein SDJN02_18176, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 300.4 bits (768), Expect = 1.0e-77
Identity = 155/157 (98.73%), Postives = 157/157 (100.00%), Query Frame = 0


Query: 1   MEDLGYLWSYQEGIDELKQRLLCTTIELESVKMAANQELTENKQNLKNLFNLLQIAYKER 60
           MEDLGYLWSYQEGIDELKQRLLCTTIELESVKMAANQELTENKQNLKNLFNLLQIAYKER
Sbjct: 1   MEDLGYLWSYQEGIDELKQRLLCTTIELESVKMAANQELTENKQNLKNLFNLLQIAYKER 60

Query: 61  DEAKNQLQKVLNSANSGITESNSLSGGGGSDAAVSSPDFSSVGDPVIENIVKGKKLPEKG 120
           DEAKNQLQKVLNSANSGITESNSLSGGGGSDAAVSSPDFSSVGDPVIENIVKGKKLPEKG
Sbjct: 61  DEAKNQLQKVLNSANSGITESNSLSGGGGSDAAVSSPDFSSVGDPVIENIVKGKKLPEKG 120

Query: 121 RLLQAVMEAGPLLQTLLVAGPLPRWRNPPPVQSLKIL 158
           RLLQAVMEAGPLLQTLLVAGPLPRWRNPPPVQSLK++
Sbjct: 121 RLLQAVMEAGPLLQTLLVAGPLPRWRNPPPVQSLKVV 157

[Close]

BLAST of CmoCh13G001570.1 vs. NCBI nr
Match: KAG6583460.1 (hypothetical protein SDJN03_19392, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 290.0 bits (741), Expect = 1.4e-74
Identity = 151/157 (96.18%), Postives = 155/157 (98.73%), Query Frame = 0


Query: 1   MEDLGYLWSYQEGIDELKQRLLCTTIELESVKMAANQELTENKQNLKNLFNLLQIAYKER 60
           MEDLGYLWSYQEGIDELKQRLLCTTIELESVKMAANQELTENKQNLKNLFNLLQIAYKER
Sbjct: 1   MEDLGYLWSYQEGIDELKQRLLCTTIELESVKMAANQELTENKQNLKNLFNLLQIAYKER 60

Query: 61  DEAKNQLQKVLNSANSGITESNSLSGGGGSDAAVSSPDFSSVGDPVIENIVKGKKLPEKG 120
           DEAKNQLQKVLN+ANSGITESNSLS GGG+DAAVSSPDFSSVGDPVIEN VKGKKLPEKG
Sbjct: 61  DEAKNQLQKVLNNANSGITESNSLS-GGGTDAAVSSPDFSSVGDPVIENFVKGKKLPEKG 120

Query: 121 RLLQAVMEAGPLLQTLLVAGPLPRWRNPPPVQSLKIL 158
           RLLQAVMEAGPLLQTLLVAGPLPRWRNPPPVQSLK++
Sbjct: 121 RLLQAVMEAGPLLQTLLVAGPLPRWRNPPPVQSLKVV 156

[Close]

BLAST of CmoCh13G001570.1 vs. NCBI nr
Match: XP_023520150.1 (uncharacterized protein LOC111783453 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 285.8 bits (730), Expect = 2.6e-73
Identity = 150/157 (95.54%), Postives = 153/157 (97.45%), Query Frame = 0


Query: 1   MEDLGYLWSYQEGIDELKQRLLCTTIELESVKMAANQELTENKQNLKNLFNLLQIAYKER 60
           MEDLGYLWSYQEGIDELKQRLL TTIELESVKMAANQE+TENKQNLKNLFNLLQIAYKER
Sbjct: 1   MEDLGYLWSYQEGIDELKQRLLYTTIELESVKMAANQEMTENKQNLKNLFNLLQIAYKER 60

Query: 61  DEAKNQLQKVLNSANSGITESNSLSGGGGSDAAVSSPDFSSVGDPVIENIVKGKKLPEKG 120
           DEAKNQLQKVLN ANSGITESNSLS GGGSDAAVSSPDFSSVGDPVIEN VKGKKLPEKG
Sbjct: 61  DEAKNQLQKVLNKANSGITESNSLS-GGGSDAAVSSPDFSSVGDPVIENFVKGKKLPEKG 120

Query: 121 RLLQAVMEAGPLLQTLLVAGPLPRWRNPPPVQSLKIL 158
           RLLQAVMEAGPLLQTLLVAGPLPRWRNPPPVQSLK++
Sbjct: 121 RLLQAVMEAGPLLQTLLVAGPLPRWRNPPPVQSLKVV 156

[Close]

BLAST of CmoCh13G001570.1 vs. NCBI nr
Match: XP_022970476.1 (uncharacterized protein LOC111469445 [Cucurbita maxima])

HSP 1 Score: 272.7 bits (696), Expect = 2.3e-69
Identity = 144/157 (91.72%), Postives = 148/157 (94.27%), Query Frame = 0


Query: 1   MEDLGYLWSYQEGIDELKQRLLCTTIELESVKMAANQELTENKQNLKNLFNLLQIAYKER 60
           MEDLGYLWSYQEGIDELKQRLL TTIELESVKMAANQE+TENKQNLKNLFNLLQIAYKER
Sbjct: 1   MEDLGYLWSYQEGIDELKQRLLYTTIELESVKMAANQEITENKQNLKNLFNLLQIAYKER 60

Query: 61  DEAKNQLQKVLNSANSGITESNSLSGGGGSDAAVSSPDFSSVGDPVIENIVKGKKLPEKG 120
           DEAKNQLQKVLN ANSGI+ESNSL     SDAAVSSPDFSSVGDPVIEN VKGKKLPEKG
Sbjct: 61  DEAKNQLQKVLNKANSGISESNSL-----SDAAVSSPDFSSVGDPVIENFVKGKKLPEKG 120

Query: 121 RLLQAVMEAGPLLQTLLVAGPLPRWRNPPPVQSLKIL 158
           RLLQAVMEAGPLLQTLLVAGPLPRWRNPP VQSLK++
Sbjct: 121 RLLQAVMEAGPLLQTLLVAGPLPRWRNPPQVQSLKVV 152

[Close]

BLAST of CmoCh13G001570.1 vs. NCBI nr
Match: XP_038894989.1 (uncharacterized protein LOC120083342 isoform X1 [Benincasa hispida])

HSP 1 Score: 215.3 bits (547), Expect = 4.4e-52
Identity = 129/196 (65.82%), Postives = 140/196 (71.43%), Query Frame = 0


Query: 1   MEDLGYLWSY-QEGIDELKQRLLCTTIELESVKMAANQELTENKQNLKNLFNLLQIAYKE 60
           MED   LWSY QEGIDELKQ+LLCTTIELESVKM ANQE+ +NK+N+KNL NLLQ+AYKE
Sbjct: 1   MEDFASLWSYHQEGIDELKQKLLCTTIELESVKMEANQEMIKNKENVKNLLNLLQLAYKE 60

Query: 61  RDEAKNQLQKVLN------------SANSGITESNSLSGGGGSD---------------- 120
           RDEAKNQL KVLN             ANS ITESNSLS    ++                
Sbjct: 61  RDEAKNQLHKVLNKLHYYQPESPLVKANSSITESNSLSADNNNNNTFNTALGSPVVDSFF 120

Query: 121 AAVSSPDFSS--VGDP--------VIENIVKGKKLPEKGRLLQAVMEAGPLLQTLLVAGP 158
            AVSSPDFSS  VGD         VIENIVKGKKLPEKGRLLQ+VMEAGPLLQTLLVAGP
Sbjct: 121 DAVSSPDFSSFNVGDSHNVDQCSLVIENIVKGKKLPEKGRLLQSVMEAGPLLQTLLVAGP 180

[Close]

BLAST of CmoCh13G001570.1 vs. TAIR 10
Match: AT2G28690.1 (Protein of unknown function (DUF1635) )

HSP 1 Score: 151.4 bits (381), Expect = 7.2e-37
Identity = 91/184 (49.46%), Postives = 120/184 (65.22%), Query Frame = 0


Query: 1   MEDLGYLWSYQEGIDELKQRLLCTTIELESVKMAANQELTENKQNLKNLFNLLQIAYKER 60
           ME+LG +W YQE +DEL+Q+L  ++ ELE+VK  AN+E   +++ +KNL +LL++A +ER
Sbjct: 1   MEELGSIWFYQESMDELRQKLQYSSFELEAVKAKANEETKLHQEEVKNLLHLLKLARQER 60

Query: 61  DEAKNQLQKVLN-SANSGITESNSLSGGGGSDA---AVSSPDFSSVG------------- 120
           DEAK+QLQK+L    NS ITESNS  G    D+    VSS +FS+               
Sbjct: 61  DEAKDQLQKLLTIKTNSSITESNS-HGSSPVDSFFEPVSSSEFSNFNMVPEPINQVKFKN 120

Query: 121 ---------------DPVIENIVKGKKLPEKGRLLQAVMEAGPLLQTLLVAGPLPRWRNP 153
                          D +++ I+KGK LPEKG+LLQ VME+GPLLQTLLVAGPLPRWRNP
Sbjct: 121 RQQLVNRNLKKIDPVDALMDEIIKGKALPEKGKLLQTVMESGPLLQTLLVAGPLPRWRNP 180

[Close]

BLAST of CmoCh13G001570.1 vs. TAIR 10
Match: AT5G59760.1 (Protein of unknown function (DUF1635) )

HSP 1 Score: 112.5 bits (280), Expect = 3.7e-25
Identity = 69/182 (37.91%), Postives = 103/182 (56.59%), Query Frame = 0


Query: 8   WSYQEGIDELKQRLLCTTIELESVKMAANQELTENKQNLKNLFNLLQIAYKERDEAKNQL 67
           W +QE IDE++Q L  T  ELE++KM AN++   +++ +  L NLL+   +ERDEA+ QL
Sbjct: 9   WLHQESIDEMRQNLQSTLFELETLKMEANEKSRTHREEVNQLLNLLKFTQQERDEARQQL 68

Query: 68  QKVL-----NSANSGITESNSLSGGGGSDAAVSS----------PDFSSVGDPVIEN--- 127
            + +     N  +  +T+SNS S      ++ SS             +++ DP   N   
Sbjct: 69  SQFIFHTQQNPNSRSLTKSNSFSHSQDVSSSSSSELSTFLNIHPQPLTNLEDPTAHNHHQ 128

Query: 128 -------IVKGKKLPEKGRLLQAVMEAGPLLQTLLVAGPLPRWRNPPPVQSLKILTVLGL 165
                  +V GK  PE G+LL+AV+EAGPLL+TLL+AGPLP+W NPPP    +   +  +
Sbjct: 129 QIDPLDVLVMGKAFPETGKLLKAVVEAGPLLETLLLAGPLPKWINPPPQTQSQRFELPSI 188

[Close]

BLAST of CmoCh13G001570.1 vs. TAIR 10
Match: AT2G28140.1 (Protein of unknown function (DUF1635) )

HSP 1 Score: 94.4 bits (233), Expect = 1.0e-19
Identity = 68/166 (40.96%), Postives = 100/166 (60.24%), Query Frame = 0


Query: 8   WSYQ-----EGIDELKQRLLCTTIELESVKMAANQELTENKQNLKNLFNLLQIAYKERDE 67
           WS+Q     + I+EL+  LL TT+ELE  +M A++EL      +  L +LL  A KE+DE
Sbjct: 12  WSHQNQCGIKTIEELRHSLLHTTMELEQTRMVASEELIAKDDQIMQLKDLLNKAIKEKDE 71

Query: 68  AKNQLQKVLNSAN------SGITESNSLSGGGGSDAAVSSPDFSSVGDPV-IENIVKGKK 127
           A+ + +++L   N      +   +  +++G   SD   S    SS   PV IE       
Sbjct: 72  AQERYKRILLDQNFLLQHQTDEEQDPNINGFHSSDGEESI--VSSFEPPVEIELDFPEMT 131

Query: 128 LPEKGRLLQAVMEAGPLLQTLLVAGPLPRWRNPPP-VQSLKILTVL 161
           LPEKG+LL+AV++AGPLLQTLL+AG LP+WR+PPP ++S +I  V+
Sbjct: 132 LPEKGKLLKAVVKAGPLLQTLLLAGQLPQWRHPPPQLESFEIPPVI 175

[Close]

BLAST of CmoCh13G001570.1 vs. TAIR 10
Match: AT3G44940.1 (Protein of unknown function (DUF1635) )

HSP 1 Score: 91.7 bits (226), Expect = 6.8e-19
Identity = 64/189 (33.86%), Postives = 98/189 (51.85%), Query Frame = 0


Query: 8   WSYQEGIDELKQRLLCTTIELESVKMAANQELTENKQNLKNLFNLLQIAYKERDEA---- 67
           +S+ +  +EL+Q L+ TT+ELE  K+ A++EL +  + L +L ++L    KERDEA    
Sbjct: 13  FSHGKTTEELRQTLVYTTMELEQTKLVAHEELRKRDEQLIHLEDVLTKTLKERDEALEKY 72

Query: 68  -----------------KNQLQKVLNSANSGIT---------------ESNSLSGGGGSD 127
                            +NQ Q+++    SG +                SN       ++
Sbjct: 73  NHLLLNNLLLQQKQQQNQNQKQELVTPPLSGASSIIEDEQVQPQQPQLNSNKSFSSSDTE 132

Query: 128 AAVSSP----------DFSSVGDPVIENIVKGKKLPEKGRLLQAVMEAGPLLQTLLVAGP 151
            ++ SP               GD ++  ++  K LPEKG+LLQAV++AGPLLQTLL+AGP
Sbjct: 133 ESIMSPSVIDPVTMNQQIEVSGDEMLATLLPDKPLPEKGKLLQAVIKAGPLLQTLLLAGP 192

[Close]

BLAST of CmoCh13G001570.1 vs. TAIR 10
Match: AT5G22930.1 (Protein of unknown function (DUF1635) )

HSP 1 Score: 90.5 bits (223), Expect = 1.5e-18
Identity = 60/179 (33.52%), Postives = 98/179 (54.75%), Query Frame = 0


Query: 8   WSYQEGIDELKQRLLCTTIELESVKMAANQELTENKQNLKNLFNLLQIAYKERDEAKNQL 67
           +S+ +  +E++Q LL TT+EL+  KM A +E+ +  + L +L ++L    KERDEA  + 
Sbjct: 14  YSHAKTTEEIRQSLLYTTLELDQTKMFAYEEIRKRDEQLIHLKDILTKTIKERDEALEKC 73

Query: 68  QKVLNSAN------------SGIT------------ESNSLSGGGGSDAAVSSPDFSSVG 127
           Q+++  ++            SG +             SN        + ++ SP    + 
Sbjct: 74  QRLMFDSHSLQQQKHMTPPLSGASSIEDEQVQPQQLRSNKSFSSSDCEESIMSPTDHIMN 133

Query: 128 DP------------VIENIVKGKKLPEKGRLLQAVMEAGPLLQTLLVAGPLPRWRNPPP 151
            P            +++ +++ K LPEKG+LLQAV++AGPLLQTLL+AGPLP+WR+PPP
Sbjct: 134 PPPCQLEEVSGTEIIMDPLLQDKPLPEKGKLLQAVIKAGPLLQTLLLAGPLPQWRHPPP 192

The following BLAST results are available for this feature:

BLAST of CmoCh13G001570.1 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh13G001570.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HIS9	5.0e-78	98.73	uncharacterized protein LOC111464824 OS=Cucurbita moschata OX=3662 GN=LOC1114648...	[more]
A0A6J1I0P4	1.1e-69	91.72	uncharacterized protein LOC111469445 OS=Cucurbita maxima OX=3661 GN=LOC111469445...	[more]
A0A5A7STR2	2.2e-49	63.32	TPRXL protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold49G00650 P...	[more]
A0A6J1KHI5	2.8e-49	62.19	uncharacterized protein LOC111493292 OS=Cucurbita maxima OX=3661 GN=LOC111493292...	[more]
A0A6J1GCY4	2.8e-49	62.19	uncharacterized protein LOC111452838 OS=Cucurbita moschata OX=3662 GN=LOC1114528...	[more]

BLAST of CmoCh13G001570.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022964842.1	1.0e-77	98.73	uncharacterized protein LOC111464824 [Cucurbita moschata] >KAG7019218.1 hypothet...	[more]
KAG6583460.1	1.4e-74	96.18	hypothetical protein SDJN03_19392, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023520150.1	2.6e-73	95.54	uncharacterized protein LOC111783453 [Cucurbita pepo subsp. pepo]	[more]
XP_022970476.1	2.3e-69	91.72	uncharacterized protein LOC111469445 [Cucurbita maxima]	[more]
XP_038894989.1	4.4e-52	65.82	uncharacterized protein LOC120083342 isoform X1 [Benincasa hispida]	[more]

BLAST of CmoCh13G001570.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G28690.1	7.2e-37	49.46	Protein of unknown function (DUF1635)	[more]
AT5G59760.1	3.7e-25	37.91	Protein of unknown function (DUF1635)	[more]
AT2G28140.1	1.0e-19	40.96	Protein of unknown function (DUF1635)	[more]
AT3G44940.1	6.8e-19	33.86	Protein of unknown function (DUF1635)	[more]
AT5G22930.1	1.5e-18	33.52	Protein of unknown function (DUF1635)	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 36..73
None	No IPR available	PANTHER	PTHR33431:SF12	HIGH MOBILITY GROUP BOX PROTEIN, PUTATIVE (DUF1635)-RELATED	coord: 1..73
None	No IPR available	PANTHER	PTHR33431:SF12	HIGH MOBILITY GROUP BOX PROTEIN, PUTATIVE (DUF1635)-RELATED	coord: 93..159
IPR012862	Protein of unknown function DUF1635	PFAM	PF07795	DUF1635	coord: 13..74 e-value: 1.7E-15 score: 57.5 coord: 103..156 e-value: 4.9E-26 score: 92.0
IPR012862	Protein of unknown function DUF1635	PANTHER	PTHR33431	ENABLED-LIKE PROTEIN (DUF1635)	coord: 1..73 coord: 93..159

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmoCh13G001570	CmoCh13G001570	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh13G001570.1:exon:7356	CmoCh13G001570.1:exon:7356	exon
CmoCh13G001570.1:exon:7357	CmoCh13G001570.1:exon:7357	exon
CmoCh13G001570.1:exon:7358	CmoCh13G001570.1:exon:7358	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh13G001570.1:five_prime_utr	CmoCh13G001570.1:five_prime_utr	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh13G001570.1:cds	CmoCh13G001570.1:cds	CDS
CmoCh13G001570.1:cds	CmoCh13G001570.1:cds_2	CDS
CmoCh13G001570.1:cds	CmoCh13G001570.1:cds_3	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmoCh13G001570.1	CmoCh13G001570.1-protein	polypeptide