CmoCh12G010770.1 (mRNA) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh12G010770.1
TypemRNA
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
LocationCmo_Chr12: 9878531 .. 9880473 (-)
Sequence length453
RNA-Seq ExpressionCmoCh12G010770.1
SyntenyCmoCh12G010770.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAAGAGTTTATACAGTAATGTCTGTACCATCCCAATCATCTACACTCTGAAAGACATCAACCTCGTTTTCCAAGTATTCAACAGACATTGTCCTTCCTGCTGAGGAGGTTGGCAACCATTCTTCTTCAGAATCTATATCATCTCTATCTGAGTCAGAATCATCACTTTCCTCCACATCATCTGGAGACTTTCTGTCCGCCTCACGTACGCTATTGTCAGTTGAGCAATGTAATACACTGTCTAATTTGTGAGAGATTATAGTTTGTTTCTTGTTGCCAGATCTTCTATTTCCAGCATACATGTCTATAAGATCGCTGAAGTCCTTCCTATAAGAGGATGGTGAAGTTGTTTTACTATGTTTTACCTGAAAAGAAAGGAAATAAAAAAAATAGGATTTGGAAATGAGAACAAGAATTATAGTTTGTATTCCGTGATATAAAACTAAACAAAGCAGAAACAAAAAGCAGTAAGATAGTAATCGTTAAAACAAAATAAATGGATAAATTTGAATGGGAAATCCAAGTTTCCTCTACTTGGGAGAAAAATTAAAGGGGGCTATAGATGAACTGGTGTATGAGTGATAAATTTTAAATTTTTTAAAATGAAGTGCAATACTCACGGAGAAGCGAAGATTTGGCCTGAAAAATGAAGTTAGAATAATCTTTGTTTCCTTTGACATACATAATGACTTTAAAATGTCTTCTCGAACTTGAACTGTGGCAGTTGCAGTCAATGCCATCAAAGGCACGTCAAATCTCAAAAATTTTAGGGTTGAAGAGCTGAAATTCTCTCGCAGAATAGACAAACGCCTGAAATTTCAAAGTGATGATGATAGTAAGTTTAAAAAAGCTAAGAAAGTTGTATGTTAAAAAGCAACGGGGCATAAATTGAAAACTATTCTAAATTTGGGCATCATTCTGGAATCTTTTTATGTAAAATTGGCAAATAAAACGGACCCAAAACACATTATGCAATTAAAACTTATTTGTGGATGCAAGATAAACACAATCCACAGGGGATCAAAATGGATGAAAACACGAGGAATGGAAATAAACCAGTTGTCTAGTTCAGGAAAAAGAAGACCTGTAGTCTGGCCGGAAGTCATGGCCCCATTTAGAAACACAGTGTACTTCATCAATTGCAAACAATGCAATTCCACGAGTTTCAGCTAGCTTTTGAAGTGGTTGAATCAATCTGCAAAACATAAATTTAATCTTTCATTACATTTGCGAAAGAAAAAATATTTCCTCAACATTGGTCATTGATTTTTATGTGAAAATTACCTTAAAACTGTCTCTGGGCAAACATAGATAATGCTATATGCCCCTCCCATTGCTTTCTTTTCCACAGAACTGTCAGGTTGCCCAGACCCAAGAAAGCAGGCAGAAACCCCATGCTTTGCAAGTTTTAAGCATTGATCGTGCATCAAGCTTATCAATGGCGAAATAACAACCACCACCTTGCCTGTTAATAAAGCTGGGATCTGAAAACAGATAGATTTCCCTGAAAGAATATGAAAAAGTGCAAAAGAGATCATCTTCCATCCAGTGCAATACTAACATGTCAAGCACGTAAAAGTGGAATGAGAGCCTAACGAGCAAAGTCATACCAGATCCTGTTGCAGCAAGAACTAGACAATCTTGGTGATTTAACCATGCTTCCAGAGCTTCCTTTTGGAACTTTTTCAAGAACGGATAGCCAAAATGCTTTTTCAGGAGCCTATTCAACTTCTTCTCCCAATCCAACAGGGTATCTGGTTCTTGTGACCAATCAACCAGATAAGAATCTGATTCAGCTTGAAGGTCACATATTCGATCCTCCTGAGTATCTTCCACGGGATAATGGGACACTTCTGGTTCGGAAATTGGAAGAACTGGTTCAGCTTCAGTCTTACTTCGTTTACCCCTATTGGTTAGAGAAAAGTGATCCAGAATGCTAG

mRNA sequence

ATGGCAAGAGTTTATACAACATTGTCCTTCCTGCTGAGGAGGTTGGCAACCATTCTTCTTCAGAATCTATATCATCTCTATCTGAGTCAGAATCATCACTTTCCTCCACATCATCTGGAGACTTTCTGTCCGCCTCACCAAGAACTAGACAATCTTGGTGATTTAACCATGCTTCCAGAGCTTCCTTTTGGAACTTTTTCAAGAACGGATAGCCAAAATGCTTTTTCAGGAGCCTATTCAACTTCTTCTCCCAATCCAACAGGGTATCTGGTTCTTGTGACCAATCAACCAGATAAGAATCTGATTCAGCTTGAAGGTCACATATTCGATCCTCCTGAGTATCTTCCACGGGATAATGGGACACTTCTGGTTCGGAAATTGGAAGAACTGGTTCAGCTTCAGTCTTACTTCGTTTACCCCTATTGGTTAGAGAAAAGTGATCCAGAATGCTAG

Coding sequence (CDS)

ATGGCAAGAGTTTATACAACATTGTCCTTCCTGCTGAGGAGGTTGGCAACCATTCTTCTTCAGAATCTATATCATCTCTATCTGAGTCAGAATCATCACTTTCCTCCACATCATCTGGAGACTTTCTGTCCGCCTCACCAAGAACTAGACAATCTTGGTGATTTAACCATGCTTCCAGAGCTTCCTTTTGGAACTTTTTCAAGAACGGATAGCCAAAATGCTTTTTCAGGAGCCTATTCAACTTCTTCTCCCAATCCAACAGGGTATCTGGTTCTTGTGACCAATCAACCAGATAAGAATCTGATTCAGCTTGAAGGTCACATATTCGATCCTCCTGAGTATCTTCCACGGGATAATGGGACACTTCTGGTTCGGAAATTGGAAGAACTGGTTCAGCTTCAGTCTTACTTCGTTTACCCCTATTGGTTAGAGAAAAGTGATCCAGAATGCTAG

Protein sequence

MARVYTTLSFLLRRLATILLQNLYHLYLSQNHHFPPHHLETFCPPHQELDNLGDLTMLPELPFGTFSRTDSQNAFSGAYSTSSPNPTGYLVLVTNQPDKNLIQLEGHIFDPPEYLPRDNGTLLVRKLEELVQLQSYFVYPYWLEKSDPEC
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CmoCh12G010770CmoCh12G010770gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmoCh12G010770.1:exon:2863CmoCh12G010770.1:exon:2863exon
CmoCh12G010770.1:exon:2862CmoCh12G010770.1:exon:2862exon
CmoCh12G010770.1:exon:2861CmoCh12G010770.1:exon:2861exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmoCh12G010770.1:cdsCmoCh12G010770.1:cds_3CDS
CmoCh12G010770.1:cdsCmoCh12G010770.1:cds_2CDS
CmoCh12G010770.1:cdsCmoCh12G010770.1:cdsCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CmoCh12G010770.1CmoCh12G010770.1-proteinpolypeptide