CmoCh11G018630.1 (mRNA) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh11G018630.1
TypemRNA
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
LocationCmo_Chr11: 12962610 .. 12963369 (-)
Sequence length679
RNA-Seq ExpressionCmoCh11G018630.1
SyntenyCmoCh11G018630.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTGGTGGGAAGGGTTCAGTTTTTTTGGCTTTCTTGCTCTTCTTTTTCCTCGTCTCCTCGGAGCTGGCTGCTGCCCGGAAGCTGATGGTGGCCGGAAACAATGGTGAGGTTCTTACATATTGTGCAGCCTACCGTTTTAGTTTTGGTTAAGTATATATAGTGAAGGCTTAAATTTGTTTTTGGATGCAGCAGCGGTCATTCCCCGCACACAAGTCTCCTACGATCCCTATTGCGATCATACCGGTTATAGGAGTTGCCTCCCACAGCCACGCCCAGTCTGCAATCCTTATGTAGAATACTGCCCTCCGAAGAACTGAAGTGGACACTAAGATCAAACACCATGGGATCTAAATAAAGTAACCCACACCTACCTGGGTTTTGATTACTATCTATCTTACCTTTGTTGTGTGTATTGAATCCTATTTATATGGTTATAAGTTCGGGAGATTTGTGTTTTATGCCGAGGATGCGCGATATAATTCGTAACTCTATCAATTTATACCATATGTTAGAAACGTTAATTTATGTGTGCAAATTTTTTAACGGTTGACCTACATTAAATTAAATTGACAAAATTGTTTTTATTATTAATCTTTAGGACACTTTCTTCACTTATAACATAAGCTCAATACATTCTAACATAGTCCCGTGACATATTTAGTAAACATCCATGGTCATATGTTTCGAGGCATGGTGTTAGTTCTCCACAACTTCTAGACTCTGTGGCTTAGGTGGGATACTTCATAGTACATGTGTG

mRNA sequence

ATGAGTGGTGGGAAGGGTTCAGTTTTTTTGGCTTTCTTGCTCTTCTTTTTCCTCGTCTCCTCGGAGCTGGCTGCTGCCCGGAAGCTGATGGTGGCCGGAAACAATGGTGAGCAGCGGTCATTCCCCGCACACAAGTCTCCTACGATCCCTATTGCGATCATACCGGTTATAGGAGTTGCCTCCCACAGCCACGCCCAGTCTGCAATCCTTATGTAGAATACTGCCCTCCGAAGAACTGAAGTGGACACTAAGATCAAACACCATGGGATCTAAATAAAGTAACCCACACCTACCTGGGTTTTGATTACTATCTATCTTACCTTTGTTGTGTGTATTGAATCCTATTTATATGGTTATAAGTTCGGGAGATTTGTGTTTTATGCCGAGGATGCGCGATATAATTCGTAACTCTATCAATTTATACCATATGTTAGAAACGTTAATTTATGTGTGCAAATTTTTTAACGGTTGACCTACATTAAATTAAATTGACAAAATTGTTTTTATTATTAATCTTTAGGACACTTTCTTCACTTATAACATAAGCTCAATACATTCTAACATAGTCCCGTGACATATTTAGTAAACATCCATGGTCATATGTTTCGAGGCATGGTGTTAGTTCTCCACAACTTCTAGACTCTGTGGCTTAGGTGGGATACTTCATAGTACATGTGTG

Coding sequence (CDS)

ATGAGTGGTGGGAAGGGTTCAGTTTTTTTGGCTTTCTTGCTCTTCTTTTTCCTCGTCTCCTCGGAGCTGGCTGCTGCCCGGAAGCTGATGGTGGCCGGAAACAATGGTGAGCAGCGGTCATTCCCCGCACACAAGTCTCCTACGATCCCTATTGCGATCATACCGGTTATAGGAGTTGCCTCCCACAGCCACGCCCAGTCTGCAATCCTTATGTAG

Protein sequence

MSGGKGSVFLAFLLFFFLVSSELAAARKLMVAGNNGEQRSFPAHKSPTIPIAIIPVIGVASHSHAQSAILM
Homology
The following BLAST results are available for this feature:
BLAST of CmoCh11G018630.1 vs.
Match NameE-valueIdentityDescription
BLAST of CmoCh11G018630.1 vs.
Match NameE-valueIdentityDescription
BLAST of CmoCh11G018630.1 vs.
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CmoCh11G018630CmoCh11G018630gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmoCh11G018630.1:exon:9894CmoCh11G018630.1:exon:9894exon
CmoCh11G018630.1:exon:9893CmoCh11G018630.1:exon:9893exon


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmoCh11G018630.1:three_prime_utrCmoCh11G018630.1:three_prime_utrthree_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmoCh11G018630.1:cdsCmoCh11G018630.1:cds_2CDS
CmoCh11G018630.1:cdsCmoCh11G018630.1:cdsCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CmoCh11G018630.1CmoCh11G018630.1-proteinpolypeptide