CmoCh10G012190.1 (mRNA) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTTGAGTTCACAAGTCCCTCTTCTCTTCCTCTCTCTCTCCTTCTTTCACCACATCACTCCTTCAAATTCAAATTTCAAGATTTTGAGTATCAATTTGCAGAGGCATAGATATCAAAATGGATGGGAAGGGCAAGAGCAAGATGCCTCCTAATGATGATGATCACAACCCTAACCCTAAAAGAACTCGCCCTTCTTCTTCATCTGGGTTCACTCTCTTTCTCTCTCTCTATTTTTTATTTCTATTTTTTCTGAGTTTTCTAGGTTTTGATGTTCTTGTCCGTTTGTTTCTCATTATAGTATTGGAGATAGATCTGTAGCTGAAGATGAACACGTGCTTGAATTTTTGTCTCGAATCCAACCTATCTTGAGCAATTGGGTATTTTTTATTTTTTGAACCTTTCTTGAAAATCCAAATTTGAATATGAAATTCATCTCTGACATTTGTGTTTTTTAAGGTTGAAGTGGGAGTGATAAATGCACTTCAAACCCACTTTCATCCTCTTCTTGAATTACTAAGGTTCGTATTTTAATTCATTCATTTTCGTTCTTCTACTTGTCTATTTGATTCGATTCTATTCTAGTTTTGTGAAATTAACAATCTTCCTACCCGATAGTTACATACGTTGTTGTTACCTTTTTGTTTGCATCACATATTACACCAATTTCAGTCTCTCAAATCTTGCTTTCAAATCTCTCTGCCCCATTTTCTAAAACTTTCTTCTTGAACCGAAACTAGAAGCTCGAGCATACGCCGCTTGGCCGTAGACGATGCAAGAACGAATTTGCTTAACTCACTTGTTGTTGGAAAGTGAGTGCCGCATAATTGCAAATCCCCTGTTGTCAAAAGTGTGATTGTAACAAGTGAGATCTAGATACAATTTTATGAGAATTTTGTTTTTAGTTTTGTGTAGGATAATTATGTTTGTTTTCTCACCGTTTCTTTACTGATTTGTTAACTAAATTTTTTTTGGATTTTTCAAATTTATAATAATTTAGGTTAGGTTTTTTTTATCCTTATTGAAAGTACCCTGAAACAAATAATCGAACTTGAAAGAAATGAAATAAATAACATGGTAACTTGAGGAGATAGTTTGTTTGTATTAAGGTATTTGTGGTAAAACGTACAACTCTGTTCCTATAGATGTTCCATGATTACTGTTTTCTTAATGCATGACTGTCGCATTCCGTGATGTTTAATGTTCGAGTTTGAACAAGCAGAGCTTATTGACTCAGAATTTAGTCCTACCCGGCATATTGTTACGTATTCCTATTAACCTATGGTTTGGTTTGATCACATAGAGAAAGGATAGAGAGTGGAGAAGAAGCAATTGTTGAAGGAGGGGTTGAGAAGTTCAAGCTAGTTTTCTGCAATCAACCAGCCTCCACTATCTTCACCAACAACAAAATCAAAGCAGAAAATGGTGAGGCTCTGGTAGTTGCAATTTGTGATGCCACAACCAATGACATAATACGCACGGGTCTCATGGCATCGGCTGCGGTTGAGCTCGGTCTTGTCAATGGAGACTATGATGGAACTAACCGTAGTGTAAGTGAATTGAATCGAAACGTTTTATCCGCAAGAGAGGGGAAAAGGCCTTTAATGCATGGTGATGGTACCAAATTCCTTTTGGAGAATGGCTATGCTCCCATTAATTGCGTGTGTATTACGGACAACTCGAGTTGGACGAAATCCAAGAAGTTTCGTATAATAGCGAAGATTATAGATGAAAAAATTCTAGCCATGTTTCCAACAATTGGGGTTGCTGTGTCCCAATCTTTTAGGGTCATGGATCATCGTGGGGAAGGTAAGCTGTATCTCTTTACAGAACTAACCATTTTGTAGTTCTACATCGTTGAATGAATGAATCTTACTTCTTTACATGGTTTTAGTGAACAAGAAGCATCATCCTCCGAGCAGAGAAGATGAAGTTTGGCGATTGGAAGGCATTGGAAAAGATGGCGCGTATCACAAAAACTTATCCTCCCATGGCATAAAAAATGTGGGCGACTTCTTACTGAAATACCATGAAATAGGTTCTGCTCTTCTGAAAAAGGTAGCCCAACAAAATCAAAATTGAAGTTATTTGTTGTTAAACCGTTCTAAGAGAAGAATGGTTAGTGTTCCATTAAATATAAGTTGGAAAAGTATTGTAATTGAAGTATGTTAGTATCAAAGAAACCCTCTTCTTATTTCTTTCTAATCCGATTATTCATTTTGATATGCTTCGACCGAGAGTCTAAACCAACCAAATAACAATTTGTGCAGCTGCTTGGTAACAAAGTTCCAGATAAAACATGGACGATGATGGTTGAAAACGCTTTTGAGTGTCAAAGCTATACCAGATATGAGCCATTATCAGAGGTTACACACACTCTTTGAACTTTTATTTCTGTATGTTGAAATAGAGAACTTTAAACTGAGTCGGATGTTGTATGAAAACAGACATATTTGCTATCAAATAATGTCATGGAAGATAGAGCTTATAATGAAGTCCTTGACATTCTCGAGCCGAACAATTTAGATCACTTGTGCTTGGAATGTGGGCTTGCTGGTATGGTGACTTAAAGTATTAAATATTTTTAAAGTTTAAAATCATTGCTTGCTTAAATGTTTGTTAAAACTTATATAAATTTGAATGGCAGATTCGCGGCCACTACTTACCGGAGAAGCTTCAACCTTATGTGAGGCAGCTGCAGCCACAACGGTATGCAGCCACAACTATGCAAATACTCATACCGATCAAAGACCTTTGACAAAGTGAGTATCCGAACTCAATGATTCATACGAATCACTATCTTTTACATCTCTGTGCAACGATAACTTAATTGAGACTCTTTCCTTTAGATTTCATACCAACTTCGTTGAAGACTCTTTTCTTTAGATTTAATATAAACTTCGTGGGA TTTTGAGTTCACAAGTCCCTCTTCTCTTCCTCTCTCTCTCCTTCTTTCACCACATCACTCCTTCAAATTCAAATTTCAAGATTTTGAGTATCAATTTGCAGAGGCATAGATATCAAAATGGATGGGAAGGGCAAGAGCAAGATGCCTCCTAATGATGATGATCACAACCCTAACCCTAAAAGAACTCGCCCTTCTTCTTCATCTGGTATTGGAGATAGATCTGTAGCTGAAGATGAACACGTGCTTGAATTTTTGTCTCGAATCCAACCTATCTTGAGCAATTGGGTTGAAGTGGGAGTGATAAATGCACTTCAAACCCACTTTCATCCTCTTCTTGAATTACTAAGAGAAAGGATAGAGAGTGGAGAAGAAGCAATTGTTGAAGGAGGGGTTGAGAAGTTCAAGCTAGTTTTCTGCAATCAACCAGCCTCCACTATCTTCACCAACAACAAAATCAAAGCAGAAAATGGTGAGGCTCTGGTAGTTGCAATTTGTGATGCCACAACCAATGACATAATACGCACGGGTCTCATGGCATCGGCTGCGGTTGAGCTCGGTCTTGTCAATGGAGACTATGATGGAACTAACCGTAGTGTAAGTGAATTGAATCGAAACGTTTTATCCGCAAGAGAGGGGAAAAGGCCTTTAATGCATGGTGATGGTACCAAATTCCTTTTGGAGAATGGCTATGCTCCCATTAATTGCGTGTGTATTACGGACAACTCGAGTTGGACGAAATCCAAGAAGTTTCGTATAATAGCGAAGATTATAGATGAAAAAATTCTAGCCATGTTTCCAACAATTGGGGTTGCTGTGTCCCAATCTTTTAGGGTCATGGATCATCGTGGGGAAGTGAACAAGAAGCATCATCCTCCGAGCAGAGAAGATGAAGTTTGGCGATTGGAAGGCATTGGAAAAGATGGCGCGTATCACAAAAACTTATCCTCCCATGGCATAAAAAATGTGGGCGACTTCTTACTGAAATACCATGAAATAGGTTCTGCTCTTCTGAAAAAGCTGCTTGGTAACAAAGTTCCAGATAAAACATGGACGATGATGGTTGAAAACGCTTTTGAGTGTCAAAGCTATACCAGATATGAGCCATTATCAGAGATTCGCGGCCACTACTTACCGGAGAAGCTTCAACCTTATGTGAGGCAGCTGCAGCCACAACGGTATGCAGCCACAACTATGCAAATACTCATACCGATCAAAGACCTTTGACAAAGTGAGTATCCGAACTCAATGATTCATACGAATCACTATCTTTTACATCTCTGTGCAACGATAACTTAATTGAGACTCTTTCCTTTAGATTTCATACCAACTTCGTTGAAGACTCTTTTCTTTAGATTTAATATAAACTTCGTGGGA ATGGATGGGAAGGGCAAGAGCAAGATGCCTCCTAATGATGATGATCACAACCCTAACCCTAAAAGAACTCGCCCTTCTTCTTCATCTGGTATTGGAGATAGATCTGTAGCTGAAGATGAACACGTGCTTGAATTTTTGTCTCGAATCCAACCTATCTTGAGCAATTGGGTTGAAGTGGGAGTGATAAATGCACTTCAAACCCACTTTCATCCTCTTCTTGAATTACTAAGAGAAAGGATAGAGAGTGGAGAAGAAGCAATTGTTGAAGGAGGGGTTGAGAAGTTCAAGCTAGTTTTCTGCAATCAACCAGCCTCCACTATCTTCACCAACAACAAAATCAAAGCAGAAAATGGTGAGGCTCTGGTAGTTGCAATTTGTGATGCCACAACCAATGACATAATACGCACGGGTCTCATGGCATCGGCTGCGGTTGAGCTCGGTCTTGTCAATGGAGACTATGATGGAACTAACCGTAGTGTAAGTGAATTGAATCGAAACGTTTTATCCGCAAGAGAGGGGAAAAGGCCTTTAATGCATGGTGATGGTACCAAATTCCTTTTGGAGAATGGCTATGCTCCCATTAATTGCGTGTGTATTACGGACAACTCGAGTTGGACGAAATCCAAGAAGTTTCGTATAATAGCGAAGATTATAGATGAAAAAATTCTAGCCATGTTTCCAACAATTGGGGTTGCTGTGTCCCAATCTTTTAGGGTCATGGATCATCGTGGGGAAGTGAACAAGAAGCATCATCCTCCGAGCAGAGAAGATGAAGTTTGGCGATTGGAAGGCATTGGAAAAGATGGCGCGTATCACAAAAACTTATCCTCCCATGGCATAAAAAATGTGGGCGACTTCTTACTGAAATACCATGAAATAGGTTCTGCTCTTCTGAAAAAGCTGCTTGGTAACAAAGTTCCAGATAAAACATGGACGATGATGGTTGAAAACGCTTTTGAGTGTCAAAGCTATACCAGATATGAGCCATTATCAGAGATTCGCGGCCACTACTTACCGGAGAAGCTTCAACCTTATGTGAGGCAGCTGCAGCCACAACGGTATGCAGCCACAACTATGCAAATACTCATACCGATCAAAGACCTTTGA MDGKGKSKMPPNDDDHNPNPKRTRPSSSSGIGDRSVAEDEHVLEFLSRIQPILSNWVEVGVINALQTHFHPLLELLRERIESGEEAIVEGGVEKFKLVFCNQPASTIFTNNKIKAENGEALVVAICDATTNDIIRTGLMASAAVELGLVNGDYDGTNRSVSELNRNVLSAREGKRPLMHGDGTKFLLENGYAPINCVCITDNSSWTKSKKFRIIAKIIDEKILAMFPTIGVAVSQSFRVMDHRGEVNKKHHPPSREDEVWRLEGIGKDGAYHKNLSSHGIKNVGDFLLKYHEIGSALLKKLLGNKVPDKTWTMMVENAFECQSYTRYEPLSEIRGHYLPEKLQPYVRQLQPQRYAATTMQILIPIKDL Homology
BLAST of CmoCh10G012190.1 vs. ExPASy Swiss-Prot
Match: F4K2R6 (Calmodulin-binding protein 60 G OS=Arabidopsis thaliana OX=3702 GN=CBP60G PE=1 SV=1) HSP 1 Score: 177.6 bits (449), Expect = 2.7e-43 Identity = 107/290 (36.90%), Postives = 160/290 (55.17%), Query Frame = 0
BLAST of CmoCh10G012190.1 vs. ExPASy Swiss-Prot
Match: C0SVV6 (Calmodulin-binding protein 60 A OS=Arabidopsis thaliana OX=3702 GN=CBP60A PE=2 SV=1) HSP 1 Score: 173.7 bits (439), Expect = 3.8e-42 Identity = 89/227 (39.21%), Postives = 145/227 (63.88%), Query Frame = 0
BLAST of CmoCh10G012190.1 vs. ExPASy Swiss-Prot
Match: C0SV51 (Calmodulin-binding protein 60 C OS=Arabidopsis thaliana OX=3702 GN=CBP60C PE=2 SV=1) HSP 1 Score: 159.1 bits (401), Expect = 9.8e-38 Identity = 112/339 (33.04%), Postives = 178/339 (52.51%), Query Frame = 0
BLAST of CmoCh10G012190.1 vs. ExPASy Swiss-Prot
Match: Q9FKL6 (Calmodulin-binding protein 60 B OS=Arabidopsis thaliana OX=3702 GN=CBP60B PE=2 SV=1) HSP 1 Score: 155.2 bits (391), Expect = 1.4e-36 Identity = 107/321 (33.33%), Postives = 170/321 (52.96%), Query Frame = 0
BLAST of CmoCh10G012190.1 vs. ExPASy Swiss-Prot
Match: Q0WVV6 (Calmodulin-binding protein 60 D OS=Arabidopsis thaliana OX=3702 GN=CBP60D PE=2 SV=1) HSP 1 Score: 154.1 bits (388), Expect = 3.1e-36 Identity = 108/323 (33.44%), Postives = 173/323 (53.56%), Query Frame = 0
BLAST of CmoCh10G012190.1 vs. ExPASy TrEMBL
Match: A0A6J1HA30 (calmodulin-binding protein 60 G-like OS=Cucurbita moschata OX=3662 GN=LOC111461978 PE=3 SV=1) HSP 1 Score: 672.5 bits (1734), Expect = 9.7e-190 Identity = 332/332 (100.00%), Postives = 332/332 (100.00%), Query Frame = 0
BLAST of CmoCh10G012190.1 vs. ExPASy TrEMBL
Match: A0A6J1HUC0 (calmodulin-binding protein 60 G-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111467877 PE=3 SV=1) HSP 1 Score: 671.4 bits (1731), Expect = 2.2e-189 Identity = 342/374 (91.44%), Postives = 349/374 (93.32%), Query Frame = 0
BLAST of CmoCh10G012190.1 vs. ExPASy TrEMBL
Match: A0A6J1HVP7 (calmodulin-binding protein 60 G-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111467877 PE=3 SV=1) HSP 1 Score: 623.6 bits (1607), Expect = 5.2e-175 Identity = 315/343 (91.84%), Postives = 321/343 (93.59%), Query Frame = 0
BLAST of CmoCh10G012190.1 vs. ExPASy TrEMBL
Match: A0A6J1HA25 (calmodulin-binding protein 60 G-like OS=Cucurbita moschata OX=3662 GN=LOC111461976 PE=3 SV=1) HSP 1 Score: 536.2 bits (1380), Expect = 1.1e-148 Identity = 268/331 (80.97%), Postives = 290/331 (87.61%), Query Frame = 0
BLAST of CmoCh10G012190.1 vs. ExPASy TrEMBL
Match: A0A6J1HC19 (calmodulin-binding protein 60 A-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111461964 PE=3 SV=1) HSP 1 Score: 479.9 bits (1234), Expect = 9.2e-132 Identity = 242/331 (73.11%), Postives = 269/331 (81.27%), Query Frame = 0
BLAST of CmoCh10G012190.1 vs. TAIR 10
Match: AT5G26920.1 (Cam-binding protein 60-like G ) HSP 1 Score: 177.6 bits (449), Expect = 1.9e-44 Identity = 107/290 (36.90%), Postives = 160/290 (55.17%), Query Frame = 0
BLAST of CmoCh10G012190.1 vs. TAIR 10
Match: AT5G26920.2 (Cam-binding protein 60-like G ) HSP 1 Score: 175.3 bits (443), Expect = 9.3e-44 Identity = 108/290 (37.24%), Postives = 158/290 (54.48%), Query Frame = 0
BLAST of CmoCh10G012190.1 vs. TAIR 10
Match: AT5G62570.1 (Calmodulin binding protein-like ) HSP 1 Score: 173.7 bits (439), Expect = 2.7e-43 Identity = 89/227 (39.21%), Postives = 145/227 (63.88%), Query Frame = 0
BLAST of CmoCh10G012190.1 vs. TAIR 10
Match: AT5G62570.2 (Calmodulin binding protein-like ) HSP 1 Score: 173.7 bits (439), Expect = 2.7e-43 Identity = 89/227 (39.21%), Postives = 145/227 (63.88%), Query Frame = 0
BLAST of CmoCh10G012190.1 vs. TAIR 10
Match: AT2G18750.1 (Calmodulin-binding protein ) HSP 1 Score: 159.1 bits (401), Expect = 6.9e-39 Identity = 112/339 (33.04%), Postives = 178/339 (52.51%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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