CmoCh10G002390.1 (mRNA) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAGAAAAGCAATCAAGAGGCTCTAAAGATGGTGAGAAAAAGAAGAGCGATCTCTATGACTATGAAGAGTTTCAGGCAATCATTGGTCACATCAACAAAGCCACTCATTTCAGTCCCAATCTCTTGTCTAACCATTTGATCAATTCTCCATTTTATCGTCAACGTTTGAATCAAATTTATAAACAAAGTAGCGTTGGCTCGACTAAGAGGATCACATGCCAAGGTTGATTTCACTTACTCGAAAGTTATGGTCAATTCTTCCTTCTTTTAATTCAATTCTCGAACTTTTTAGCACTTTTTAGCTTATCAATTTTATTATGTTCAGGTTGTCAACAACAAAGAAAAATAGAGATGGTTAGAGGAACCACAAGGCAAAAGGGGGTAATTTCACTTACCACCGGGAAGTTATGGAAGCAAATTAAGCAAAACTTGGCCAATATTCTTTCGAAGAAAGATGTGAAGTAA ATGGAAGAAAAGCAATCAAGAGGCTCTAAAGATGGTGAGAAAAAGAAGAGCGATCTCTATGACTATGAAGAGTTTCAGGCAATCATTGGTCACATCAACAAAGCCACTCATTTCAGTCCCAATCTCTTGTCTAACCATTTGATCAATTCTCCATTTTATCGTCAACGTTTGAATCAAATTTATAAACAAAGTAGCGTTGGCTCGACTAAGAGGATCACATGCCAAGGTTGTCAACAACAAAGAAAAATAGAGATGGTTAGAGGAACCACAAGGCAAAAGGGGGTAATTTCACTTACCACCGGGAAGTTATGGAAGCAAATTAAGCAAAACTTGGCCAATATTCTTTCGAAGAAAGATGTGAAGTAA ATGGAAGAAAAGCAATCAAGAGGCTCTAAAGATGGTGAGAAAAAGAAGAGCGATCTCTATGACTATGAAGAGTTTCAGGCAATCATTGGTCACATCAACAAAGCCACTCATTTCAGTCCCAATCTCTTGTCTAACCATTTGATCAATTCTCCATTTTATCGTCAACGTTTGAATCAAATTTATAAACAAAGTAGCGTTGGCTCGACTAAGAGGATCACATGCCAAGGTTGTCAACAACAAAGAAAAATAGAGATGGTTAGAGGAACCACAAGGCAAAAGGGGGTAATTTCACTTACCACCGGGAAGTTATGGAAGCAAATTAAGCAAAACTTGGCCAATATTCTTTCGAAGAAAGATGTGAAGTAA MEEKQSRGSKDGEKKKSDLYDYEEFQAIIGHINKATHFSPNLLSNHLINSPFYRQRLNQIYKQSSVGSTKRITCQGCQQQRKIEMVRGTTRQKGVISLTTGKLWKQIKQNLANILSKKDVK Homology
BLAST of CmoCh10G002390.1 vs. ExPASy TrEMBL
Match: A0A0A0KW83 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G179690 PE=4 SV=1) HSP 1 Score: 127.1 bits (318), Expect = 5.0e-26 Identity = 73/124 (58.87%), Postives = 95/124 (76.61%), Query Frame = 0
BLAST of CmoCh10G002390.1 vs. ExPASy TrEMBL
Match: A0A2P5D6L7 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_092670 PE=4 SV=1) HSP 1 Score: 55.8 bits (133), Expect = 1.4e-04 Identity = 37/104 (35.58%), Postives = 58/104 (55.77%), Query Frame = 0
BLAST of CmoCh10G002390.1 vs. ExPASy TrEMBL
Match: A0A2P5DAP5 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_257060 PE=4 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 4.1e-04 Identity = 37/104 (35.58%), Postives = 57/104 (54.81%), Query Frame = 0
BLAST of CmoCh10G002390.1 vs. NCBI nr
Match: KGN53885.1 (hypothetical protein Csa_011823 [Cucumis sativus]) HSP 1 Score: 127.1 bits (318), Expect = 1.0e-25 Identity = 73/124 (58.87%), Postives = 95/124 (76.61%), Query Frame = 0
BLAST of CmoCh10G002390.1 vs. NCBI nr
Match: PON68950.1 (hypothetical protein PanWU01x14_092670 [Parasponia andersonii]) HSP 1 Score: 55.8 bits (133), Expect = 2.9e-04 Identity = 37/104 (35.58%), Postives = 58/104 (55.77%), Query Frame = 0
BLAST of CmoCh10G002390.1 vs. NCBI nr
Match: PON70340.1 (hypothetical protein TorRG33x02_257060 [Trema orientale]) HSP 1 Score: 54.3 bits (129), Expect = 8.5e-04 Identity = 37/104 (35.58%), Postives = 57/104 (54.81%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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