CmoCh10G000130.1 (mRNA) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh10G000130.1
Type	mRNA
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Alpha-mannosidase
Location	Cmo_Chr10: 94905 .. 95702 (+)
Sequence length	725
RNA-Seq Expression	CmoCh10G000130.1
Synteny	CmoCh10G000130.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTACTGTAGAACTAAGGAAGTTGTTTCCTGAAAAGAAGGTAGAAGCATTATTATTTTGTCCGTTAAATGGAGTGATAAAAGTTGACAGGTGGTTATTCCATTATTTTTCAGACAATCAAGGTAACGGAGACAAGTTTATCTGCCAACCAAGAAAGAGCAGAAATGGAGAAGAAGAGGTTGGTGTGGAAAGTAGAAGGGAATTCTAAAGGAGAAAAGGCCTTGAGAGGAGGGCCTGTGAACTCAGCGAAGTTGGTGGTAGAACTAGCTCCCATGGAAATTCGAACCTTCCTGATTGATTTTACAGTCAAATAATCATGTCCAGGTAACGCCACTATTATTCAATGAACCGGGTATAGAGAGGACGAAAAGAGGTGGTCCAGTAGCTAGTTTCTGCCTTGCTCGAATAAGGGGAAATAAAGATGAAGACATTCAGTGTGTTTATTGGAAGTAAGAATGTTGTAAACGTTAATTAATCCGACAAGTTCTCAACGTGACAAACTATGGTTGGGACATTGAGTTGTATTGCTAACAGGCAAGTATTTTCCATAACATAACGCCTTCGTGGCTTAACTTGGGTTTTGCCACAAACACAAGCTGCAGTATGCATAGAAGCCAAAAAGAGATTAGCGAGAAGGTTGGTTGGTGTTGAGGATTTTTGGAAGAGAAGTTCCACGATGACTAATTAAGGGTTTGATTATGGATTTATAAGTAAGGAATACATCTCCATTGGAATTGGGTATTTTGAGAAAACCAAAAGTAAAGTCACGAGAGCTTATGCTCAAAGTGGACAATAT

mRNA sequence

ATGGCTACTGTAGAACTAAGGAAGTTGTTTCCTGAAAAGAAGACAATCAAGGTAACGGAGACAAGTTTATCTGCCAACCAAGAAAGAGCAGAAATGGAGAAGAAGAGGTTGGTGTGGAAAGTAGAAGGGAATTCTAAAGGAGAAAAGGCCTTGAGAGGAGGGCCTGTGAACTCAGCGAAGTTGGTGGTAGAACTAGCTCCCATGGAAATTCGAACCTTCCTGATTGATTTTACAGTCAAATAATCATGTCCAGGTAACGCCACTATTATTCAATGAACCGGGTATAGAGAGGACGAAAAGAGGTGGTCCAGTAGCTAGTTTCTGCCTTGCTCGAATAAGGGGAAATAAAGATGAAGACATTCAGTGTGTTTATTGGAAGTAAGAATGTTGTAAACGTTAATTAATCCGACAAGTTCTCAACGTGACAAACTATGGTTGGGACATTGAGTTGTATTGCTAACAGGCAAGTATTTTCCATAACATAACGCCTTCGTGGCTTAACTTGGGTTTTGCCACAAACACAAGCTGCAGTATGCATAGAAGCCAAAAAGAGATTAGCGAGAAGGTTGGTTGGTGTTGAGGATTTTTGGAAGAGAAGTTCCACGATGACTAATTAAGGGTTTGATTATGGATTTATAAGTAAGGAATACATCTCCATTGGAATTGGGTATTTTGAGAAAACCAAAAGTAAAGTCACGAGAGCTTATGCTCAAAGTGGACAATAT

Coding sequence (CDS)

ATGGCTACTGTAGAACTAAGGAAGTTGTTTCCTGAAAAGAAGACAATCAAGGTAACGGAGACAAGTTTATCTGCCAACCAAGAAAGAGCAGAAATGGAGAAGAAGAGGTTGGTGTGGAAAGTAGAAGGGAATTCTAAAGGAGAAAAGGCCTTGAGAGGAGGGCCTGTGAACTCAGCGAAGTTGGTGGTAGAACTAGCTCCCATGGAAATTCGAACCTTCCTGATTGATTTTACAGTCAAATAA

Protein sequence

MATVELRKLFPEKKTIKVTETSLSANQERAEMEKKRLVWKVEGNSKGEKALRGGPVNSAKLVVELAPMEIRTFLIDFTVK

Homology

[Close]

BLAST of CmoCh10G000130.1 vs. ExPASy Swiss-Prot
Match: P94078 (Alpha-mannosidase At3g26720 OS=Arabidopsis thaliana OX=3702 GN=At3g26720 PE=1 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 1.9e-18
Identity = 52/77 (67.53%), Postives = 60/77 (77.92%), Query Frame = 0


Query: 1    MATVELRKLFPEKKTIKVTETSLSANQERAEMEKKRLVWKVEGNSKGEKALRGGPVNSAK 60
            MA VEL+KLF  KK  +V ETSLS NQE+AEMEK+RL+WKVEG S GE+  RG  V++ K
Sbjct: 928  MAKVELKKLFHNKKIREVKETSLSGNQEKAEMEKRRLIWKVEG-SAGEEVKRGEAVDAEK 987

Query: 61   LVVELAPMEIRTFLIDF 78
            LVVEL PMEIRT LI F
Sbjct: 988  LVVELVPMEIRTLLIKF 1003

[Close]

BLAST of CmoCh10G000130.1 vs. ExPASy Swiss-Prot
Match: Q8LPJ3 (Probable alpha-mannosidase At5g13980 OS=Arabidopsis thaliana OX=3702 GN=At5g13980 PE=2 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 3.9e-16
Identity = 52/78 (66.67%), Postives = 60/78 (76.92%), Query Frame = 0


Query: 1    MATVELRKLFPEKKTIKVTETSLSANQERAEMEKKRLVWKVEG-NSKGE--KALRGGPVN 60
            +A+VEL+KLFP KK  K+TE SLSANQER+ MEKKRLVWKVEG  S GE  KA RG  ++
Sbjct: 931  VASVELKKLFPGKKIGKLTEMSLSANQERSTMEKKRLVWKVEGEGSYGEEKKAKRGREID 990

Query: 61   SAKLVVELAPMEIRTFLI 76
              KL +EL PMEIRT LI
Sbjct: 991  PRKLEMELYPMEIRTVLI 1008

[Close]

BLAST of CmoCh10G000130.1 vs. ExPASy Swiss-Prot
Match: Q9FKW9 (Probable alpha-mannosidase At5g66150 OS=Arabidopsis thaliana OX=3702 GN=At5g66150 PE=3 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 3.6e-14
Identity = 45/81 (55.56%), Postives = 60/81 (74.07%), Query Frame = 0


Query: 1    MATVELRKLFPEKKTIKVTETSLSANQERAEMEKKRLVWKVEGNSKGEKA-LRGGPVNSA 60
            +A VEL+KLF  K   +VTE SLSANQE+ +M K+++ WKVEG ++   + LRGGPV+ +
Sbjct: 959  IAKVELKKLFSGKMIKEVTEMSLSANQEKVKM-KEKMKWKVEGEAEQPSSPLRGGPVDKS 1018

Query: 61   KLVVELAPMEIRTFLIDFTVK 81
             LVVEL PMEIRTF++ F  K
Sbjct: 1019 TLVVELGPMEIRTFVVQFYQK 1038

[Close]

BLAST of CmoCh10G000130.1 vs. ExPASy Swiss-Prot
Match: C0HJB3 (Alpha-mannosidase OS=Canavalia ensiformis OX=3823 PE=1 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 3.6e-14
Identity = 43/78 (55.13%), Postives = 60/78 (76.92%), Query Frame = 0


Query: 1   MATVELRKLFPEKKTIKVTETSLSANQERAEMEKKRLVWKVEGNSKGE-KALRGGPVNSA 60
           +  VEL+KLF  +K  ++ E SLSANQE++EM  K++ W VEG+++ E +A+RGGPV++A
Sbjct: 906 LTKVELKKLFATQKLEELREVSLSANQEKSEM--KKMKWSVEGDNEQEPQAVRGGPVSNA 965

Query: 61  KLVVELAPMEIRTFLIDF 78
             VVEL PMEIRTFL+ F
Sbjct: 966 DFVVELGPMEIRTFLLQF 981

[Close]

BLAST of CmoCh10G000130.1 vs. ExPASy TrEMBL
Match: A0A6J1E5D1 (Alpha-mannosidase OS=Cucurbita moschata OX=3662 GN=LOC111430088 PE=3 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 9.6e-34
Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 0


Query: 1   MATVELRKLFPEKKTIKVTETSLSANQERAEMEKKRLVWKVEGNSKGEKALRGGPVNSAK 60
           MATVELRKLFPEKKTIKVTETSLSANQERAEMEKKRLVWKVEGNSKGEKALRGGPVNSAK
Sbjct: 914 MATVELRKLFPEKKTIKVTETSLSANQERAEMEKKRLVWKVEGNSKGEKALRGGPVNSAK 973

Query: 61  LVVELAPMEIRTFLIDFTVK 81
           LVVELAPMEIRTFLIDFTVK
Sbjct: 974 LVVELAPMEIRTFLIDFTVK 993

[Close]

BLAST of CmoCh10G000130.1 vs. ExPASy TrEMBL
Match: A0A6J1E1X4 (Alpha-mannosidase OS=Cucurbita moschata OX=3662 GN=LOC111430088 PE=3 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 9.6e-34
Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 0


Query: 1    MATVELRKLFPEKKTIKVTETSLSANQERAEMEKKRLVWKVEGNSKGEKALRGGPVNSAK 60
            MATVELRKLFPEKKTIKVTETSLSANQERAEMEKKRLVWKVEGNSKGEKALRGGPVNSAK
Sbjct: 955  MATVELRKLFPEKKTIKVTETSLSANQERAEMEKKRLVWKVEGNSKGEKALRGGPVNSAK 1014

Query: 61   LVVELAPMEIRTFLIDFTVK 81
            LVVELAPMEIRTFLIDFTVK
Sbjct: 1015 LVVELAPMEIRTFLIDFTVK 1034

[Close]

BLAST of CmoCh10G000130.1 vs. ExPASy TrEMBL
Match: A0A6J1E248 (Alpha-mannosidase OS=Cucurbita moschata OX=3662 GN=LOC111430088 PE=3 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 9.6e-34
Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 0


Query: 1   MATVELRKLFPEKKTIKVTETSLSANQERAEMEKKRLVWKVEGNSKGEKALRGGPVNSAK 60
           MATVELRKLFPEKKTIKVTETSLSANQERAEMEKKRLVWKVEGNSKGEKALRGGPVNSAK
Sbjct: 899 MATVELRKLFPEKKTIKVTETSLSANQERAEMEKKRLVWKVEGNSKGEKALRGGPVNSAK 958

Query: 61  LVVELAPMEIRTFLIDFTVK 81
           LVVELAPMEIRTFLIDFTVK
Sbjct: 959 LVVELAPMEIRTFLIDFTVK 978

[Close]

BLAST of CmoCh10G000130.1 vs. ExPASy TrEMBL
Match: A0A6J1JIM1 (Alpha-mannosidase OS=Cucurbita maxima OX=3661 GN=LOC111484786 PE=3 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 2.4e-32
Identity = 78/80 (97.50%), Postives = 78/80 (97.50%), Query Frame = 0


Query: 1   MATVELRKLFPEKKTIKVTETSLSANQERAEMEKKRLVWKVEGNSKGEKALRGGPVNSAK 60
           MATVELRKLFPEKKTIKVTETSLSANQERAEMEKKRLVWKVEGNSKGE ALRGGPVNSAK
Sbjct: 899 MATVELRKLFPEKKTIKVTETSLSANQERAEMEKKRLVWKVEGNSKGENALRGGPVNSAK 958

Query: 61  LVVELAPMEIRTFLIDFTVK 81
           LVVELAPMEIRTFLIDFT K
Sbjct: 959 LVVELAPMEIRTFLIDFTDK 978

[Close]

BLAST of CmoCh10G000130.1 vs. ExPASy TrEMBL
Match: A0A6J1JDB3 (Alpha-mannosidase OS=Cucurbita maxima OX=3661 GN=LOC111484786 PE=3 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 2.4e-32
Identity = 78/80 (97.50%), Postives = 78/80 (97.50%), Query Frame = 0


Query: 1    MATVELRKLFPEKKTIKVTETSLSANQERAEMEKKRLVWKVEGNSKGEKALRGGPVNSAK 60
            MATVELRKLFPEKKTIKVTETSLSANQERAEMEKKRLVWKVEGNSKGE ALRGGPVNSAK
Sbjct: 955  MATVELRKLFPEKKTIKVTETSLSANQERAEMEKKRLVWKVEGNSKGENALRGGPVNSAK 1014

Query: 61   LVVELAPMEIRTFLIDFTVK 81
            LVVELAPMEIRTFLIDFT K
Sbjct: 1015 LVVELAPMEIRTFLIDFTDK 1034

[Close]

BLAST of CmoCh10G000130.1 vs. NCBI nr
Match: XP_022922002.1 (probable alpha-mannosidase At5g13980 isoform X1 [Cucurbita moschata])

HSP 1 Score: 152.1 bits (383), Expect = 2.0e-33
Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 0


Query: 1    MATVELRKLFPEKKTIKVTETSLSANQERAEMEKKRLVWKVEGNSKGEKALRGGPVNSAK 60
            MATVELRKLFPEKKTIKVTETSLSANQERAEMEKKRLVWKVEGNSKGEKALRGGPVNSAK
Sbjct: 955  MATVELRKLFPEKKTIKVTETSLSANQERAEMEKKRLVWKVEGNSKGEKALRGGPVNSAK 1014

Query: 61   LVVELAPMEIRTFLIDFTVK 81
            LVVELAPMEIRTFLIDFTVK
Sbjct: 1015 LVVELAPMEIRTFLIDFTVK 1034

[Close]

BLAST of CmoCh10G000130.1 vs. NCBI nr
Match: XP_023516222.1 (probable alpha-mannosidase At5g13980 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 152.1 bits (383), Expect = 2.0e-33
Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 0


Query: 1   MATVELRKLFPEKKTIKVTETSLSANQERAEMEKKRLVWKVEGNSKGEKALRGGPVNSAK 60
           MATVELRKLFPEKKTIKVTETSLSANQERAEMEKKRLVWKVEGNSKGEKALRGGPVNSAK
Sbjct: 914 MATVELRKLFPEKKTIKVTETSLSANQERAEMEKKRLVWKVEGNSKGEKALRGGPVNSAK 973

Query: 61  LVVELAPMEIRTFLIDFTVK 81
           LVVELAPMEIRTFLIDFTVK
Sbjct: 974 LVVELAPMEIRTFLIDFTVK 993

[Close]

BLAST of CmoCh10G000130.1 vs. NCBI nr
Match: KAG7023026.1 (putative alpha-mannosidase [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 152.1 bits (383), Expect = 2.0e-33
Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 0


Query: 1    MATVELRKLFPEKKTIKVTETSLSANQERAEMEKKRLVWKVEGNSKGEKALRGGPVNSAK 60
            MATVELRKLFPEKKTIKVTETSLSANQERAEMEKKRLVWKVEGNSKGEKALRGGPVNSAK
Sbjct: 955  MATVELRKLFPEKKTIKVTETSLSANQERAEMEKKRLVWKVEGNSKGEKALRGGPVNSAK 1014

Query: 61   LVVELAPMEIRTFLIDFTVK 81
            LVVELAPMEIRTFLIDFTVK
Sbjct: 1015 LVVELAPMEIRTFLIDFTVK 1034

[Close]

BLAST of CmoCh10G000130.1 vs. NCBI nr
Match: XP_022922003.1 (probable alpha-mannosidase At5g13980 isoform X2 [Cucurbita moschata])

HSP 1 Score: 152.1 bits (383), Expect = 2.0e-33
Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 0


Query: 1   MATVELRKLFPEKKTIKVTETSLSANQERAEMEKKRLVWKVEGNSKGEKALRGGPVNSAK 60
           MATVELRKLFPEKKTIKVTETSLSANQERAEMEKKRLVWKVEGNSKGEKALRGGPVNSAK
Sbjct: 914 MATVELRKLFPEKKTIKVTETSLSANQERAEMEKKRLVWKVEGNSKGEKALRGGPVNSAK 973

Query: 61  LVVELAPMEIRTFLIDFTVK 81
           LVVELAPMEIRTFLIDFTVK
Sbjct: 974 LVVELAPMEIRTFLIDFTVK 993

[Close]

BLAST of CmoCh10G000130.1 vs. NCBI nr
Match: XP_022922004.1 (probable alpha-mannosidase At5g13980 isoform X3 [Cucurbita moschata])

HSP 1 Score: 152.1 bits (383), Expect = 2.0e-33
Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 0


Query: 1   MATVELRKLFPEKKTIKVTETSLSANQERAEMEKKRLVWKVEGNSKGEKALRGGPVNSAK 60
           MATVELRKLFPEKKTIKVTETSLSANQERAEMEKKRLVWKVEGNSKGEKALRGGPVNSAK
Sbjct: 899 MATVELRKLFPEKKTIKVTETSLSANQERAEMEKKRLVWKVEGNSKGEKALRGGPVNSAK 958

Query: 61  LVVELAPMEIRTFLIDFTVK 81
           LVVELAPMEIRTFLIDFTVK
Sbjct: 959 LVVELAPMEIRTFLIDFTVK 978

[Close]

BLAST of CmoCh10G000130.1 vs. TAIR 10
Match: AT3G26720.1 (Glycosyl hydrolase family 38 protein )

HSP 1 Score: 92.8 bits (229), Expect = 1.3e-19
Identity = 52/77 (67.53%), Postives = 60/77 (77.92%), Query Frame = 0


Query: 1    MATVELRKLFPEKKTIKVTETSLSANQERAEMEKKRLVWKVEGNSKGEKALRGGPVNSAK 60
            MA VEL+KLF  KK  +V ETSLS NQE+AEMEK+RL+WKVEG S GE+  RG  V++ K
Sbjct: 928  MAKVELKKLFHNKKIREVKETSLSGNQEKAEMEKRRLIWKVEG-SAGEEVKRGEAVDAEK 987

Query: 61   LVVELAPMEIRTFLIDF 78
            LVVEL PMEIRT LI F
Sbjct: 988  LVVELVPMEIRTLLIKF 1003

[Close]

BLAST of CmoCh10G000130.1 vs. TAIR 10
Match: AT5G13980.1 (Glycosyl hydrolase family 38 protein )

HSP 1 Score: 85.1 bits (209), Expect = 2.8e-17
Identity = 52/78 (66.67%), Postives = 60/78 (76.92%), Query Frame = 0


Query: 1    MATVELRKLFPEKKTIKVTETSLSANQERAEMEKKRLVWKVEG-NSKGE--KALRGGPVN 60
            +A+VEL+KLFP KK  K+TE SLSANQER+ MEKKRLVWKVEG  S GE  KA RG  ++
Sbjct: 931  VASVELKKLFPGKKIGKLTEMSLSANQERSTMEKKRLVWKVEGEGSYGEEKKAKRGREID 990

Query: 61   SAKLVVELAPMEIRTFLI 76
              KL +EL PMEIRT LI
Sbjct: 991  PRKLEMELYPMEIRTVLI 1008

[Close]

BLAST of CmoCh10G000130.1 vs. TAIR 10
Match: AT5G13980.2 (Glycosyl hydrolase family 38 protein )

HSP 1 Score: 85.1 bits (209), Expect = 2.8e-17
Identity = 52/78 (66.67%), Postives = 60/78 (76.92%), Query Frame = 0


Query: 1    MATVELRKLFPEKKTIKVTETSLSANQERAEMEKKRLVWKVEG-NSKGE--KALRGGPVN 60
            +A+VEL+KLFP KK  K+TE SLSANQER+ MEKKRLVWKVEG  S GE  KA RG  ++
Sbjct: 931  VASVELKKLFPGKKIGKLTEMSLSANQERSTMEKKRLVWKVEGEGSYGEEKKAKRGREID 990

Query: 61   SAKLVVELAPMEIRTFLI 76
              KL +EL PMEIRT LI
Sbjct: 991  PRKLEMELYPMEIRTVLI 1008

[Close]

BLAST of CmoCh10G000130.1 vs. TAIR 10
Match: AT5G66150.1 (Glycosyl hydrolase family 38 protein )

HSP 1 Score: 78.6 bits (192), Expect = 2.6e-15
Identity = 45/81 (55.56%), Postives = 60/81 (74.07%), Query Frame = 0


Query: 1    MATVELRKLFPEKKTIKVTETSLSANQERAEMEKKRLVWKVEGNSKGEKA-LRGGPVNSA 60
            +A VEL+KLF  K   +VTE SLSANQE+ +M K+++ WKVEG ++   + LRGGPV+ +
Sbjct: 959  IAKVELKKLFSGKMIKEVTEMSLSANQEKVKM-KEKMKWKVEGEAEQPSSPLRGGPVDKS 1018

Query: 61   KLVVELAPMEIRTFLIDFTVK 81
             LVVEL PMEIRTF++ F  K
Sbjct: 1019 TLVVELGPMEIRTFVVQFYQK 1038

The following BLAST results are available for this feature:

BLAST of CmoCh10G000130.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P94078	1.9e-18	67.53	Alpha-mannosidase At3g26720 OS=Arabidopsis thaliana OX=3702 GN=At3g26720 PE=1 SV...	[more]
Q8LPJ3	3.9e-16	66.67	Probable alpha-mannosidase At5g13980 OS=Arabidopsis thaliana OX=3702 GN=At5g1398...	[more]
Q9FKW9	3.6e-14	55.56	Probable alpha-mannosidase At5g66150 OS=Arabidopsis thaliana OX=3702 GN=At5g6615...	[more]
C0HJB3	3.6e-14	55.13	Alpha-mannosidase OS=Canavalia ensiformis OX=3823 PE=1 SV=1	[more]

BLAST of CmoCh10G000130.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E5D1	9.6e-34	100.00	Alpha-mannosidase OS=Cucurbita moschata OX=3662 GN=LOC111430088 PE=3 SV=1	[more]
A0A6J1E1X4	9.6e-34	100.00	Alpha-mannosidase OS=Cucurbita moschata OX=3662 GN=LOC111430088 PE=3 SV=1	[more]
A0A6J1E248	9.6e-34	100.00	Alpha-mannosidase OS=Cucurbita moschata OX=3662 GN=LOC111430088 PE=3 SV=1	[more]
A0A6J1JIM1	2.4e-32	97.50	Alpha-mannosidase OS=Cucurbita maxima OX=3661 GN=LOC111484786 PE=3 SV=1	[more]
A0A6J1JDB3	2.4e-32	97.50	Alpha-mannosidase OS=Cucurbita maxima OX=3661 GN=LOC111484786 PE=3 SV=1	[more]

BLAST of CmoCh10G000130.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022922002.1	2.0e-33	100.00	probable alpha-mannosidase At5g13980 isoform X1 [Cucurbita moschata]	[more]
XP_023516222.1	2.0e-33	100.00	probable alpha-mannosidase At5g13980 isoform X2 [Cucurbita pepo subsp. pepo]	[more]
KAG7023026.1	2.0e-33	100.00	putative alpha-mannosidase [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022922003.1	2.0e-33	100.00	probable alpha-mannosidase At5g13980 isoform X2 [Cucurbita moschata]	[more]
XP_022922004.1	2.0e-33	100.00	probable alpha-mannosidase At5g13980 isoform X3 [Cucurbita moschata]	[more]

BLAST of CmoCh10G000130.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G26720.1	1.3e-19	67.53	Glycosyl hydrolase family 38 protein	[more]
AT5G13980.1	2.8e-17	66.67	Glycosyl hydrolase family 38 protein	[more]
AT5G13980.2	2.8e-17	66.67	Glycosyl hydrolase family 38 protein	[more]
AT5G66150.1	2.6e-15	55.56	Glycosyl hydrolase family 38 protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR041147	Glycosyl hydrolases family 38, C-terminal beta sandwich domain	PFAM	PF17677	Glyco_hydro38C2	coord: 14..74 e-value: 8.0E-5 score: 22.7
None	No IPR available	GENE3D	2.60.40.1360		coord: 1..80 e-value: 4.3E-19 score: 70.8
None	No IPR available	PANTHER	PTHR11607	ALPHA-MANNOSIDASE	coord: 1..78
None	No IPR available	PANTHER	PTHR11607:SF60	ALPHA-MANNOSIDASE	coord: 1..78
IPR011013	Galactose mutarotase-like domain superfamily	SUPERFAMILY	74650	Galactose mutarotase-like	coord: 3..78

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmoCh10G000130	CmoCh10G000130	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh10G000130.1:exon:5252	CmoCh10G000130.1:exon:5252	exon
CmoCh10G000130.1:exon:5253	CmoCh10G000130.1:exon:5253	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh10G000130.1:cds	CmoCh10G000130.1:cds	CDS
CmoCh10G000130.1:cds	CmoCh10G000130.1:cds_2	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh10G000130.1:three_prime_utr	CmoCh10G000130.1:three_prime_utr	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmoCh10G000130.1	CmoCh10G000130.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
biological_process	GO:0006013	mannose metabolic process
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0030246	carbohydrate binding
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:0004559	alpha-mannosidase activity
molecular_function	GO:0046872	metal ion binding