CmoCh09G003210.1 (mRNA) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh09G003210.1
TypemRNA
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
LocationCmo_Chr09: 1393986 .. 1400086 (-)
Sequence length210
RNA-Seq ExpressionCmoCh09G003210.1
SyntenyCmoCh09G003210.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTCCCTTCCCTAGCTGGCTGTACTACGTCTACGTGAGTTCCAATCTGTATTATTCCCATTCAAAACTATAAAATACACGCGTGTTGTTTACACGTTGGATGACAGCATCCTTAAAACCTTTAAATACTGGGCCCAATTAAGGAAGAAGTAGTGGGCCTGAGTGAGCTATATAGGCCCAGGAGAATGCAGAAAATGGTATGTTGCATGGAAGAAATAAACAGATGTTGGATGGATGGATGGATGGATTGGACCGAAATGGTGAATTTACTGGGATGAGGCCCACAGTCATTAAATAAGAGGGTTTAGTATGAATGAAAAAAAGAGGGTAAAATTAGACCGTTGGTAGCAGAAGAACGATGGAGGATTAGAAAAGGAGGATGGCCCCATAGACCATCAAATCAAGCTGATAGGGTCCCACCATCTACGACAAAACTTTCTCCCTCCCCCTCTGTTTCTCTTTCTCTCTAAAGAAAGAAGACGATGGTGGATGGGACCCAGAAAGAGTCCCATCGTTGTCCCTAAATACCTGGTTTAGGTGGAGCCCACGTCCCACATGGGTGTAGAGAGAGAGAGAAAGCTGGAGATGTGGAAGAAGGATGAGGTTCTTGTGTGCTCTTCCTCTCTTCCTTTGCTTCAGATTCAGATTGAGTTTACGTTTGACATGATGGGGGATGGGGCTTTGGGTCCCACGCCTATTGAAAAGTTCAAACAACGAACCCTTTCTTTTTTTTTTTCTCTTTTTTCTTTTTTTCTGGGAGAGTTGAGAGAGAAAGTGGAAGTGACAGTGGTGGAGTTGCAGTAAGGGGGGGGGGGAGAGAGAGAGAAAGAGGTAGCTGTTTGTGGTGGATATGGCGAAACAGCCCCCGCGGTGTTCTCGCGCGCCATTTCCCCCTCTTCTTCACACTGACACCTCCACCCACTCTCACGTTTATGCTCTTTTTTAGTCTTACCCTTTATATTCCCCCTTTTTCTTATCTATGAATGTGGGTGTTATTAGGACTCGTTGGCCTTTATATTTCCTCCCTCAATCTCTTCCATTTCAAAAGTTTAATCAAATTAGAATTTGATTCAAAGGATGAGACACTGATATTAGATCTACGTAGTTGTTTGGAGTCATTATAAGGTCTCTGGTGTGGTTGTACTTCAAGAGACACAATTCAAGCTCATCCAAATATATATCGAAGTACTTGTCGTGTATAGCCTAAATTGAACCATGCAAGAGTCAGAGCTCAATCACATAGTTTAGACCATAAAAAATCTTTGAAAGATCGAGTACAAACATTCAAATATACCCATACGAGTCAACATATTCTTCCTTACTTAGTTAGTCAACCTTTCTCTCTATGGTAAAGAAAATTCTTACCAATCTTAGCTCAACACTAACCCACAAATGTAACATTAACAAGTTTTAAGTGAAAAACAGTAGTAAAATGCTGTGTTTATTAATTATTATAATCCTTCCTAAGTACAAATTCTATAATCTTTTTGAATTTTAATTTTTTTTAATGATATTCGATATCTTTTAAAATGAGGTATCTATTCAAGACCATTAAATTAAATTTGTTTTTTATATTATGGTTAACCCTTCTATCTCTAAACATGGCTTTTTCAAATTTGTTTCCTTTTCAACAACATAGACATTAAGGGTCATGTTATTTTTCTTTATGTTTTTAAATCTAACTTTTAAATTTTGTATCTCCTCATTCAAACTCATTGTCTTAAATATTGTCGTATGGTTAATTCGTTATATATCATCAAATTTTTAAAAAATAATATGAGAGAGATTTTCACATCCTTATAAAAAATGTTTTGTTCTTTTGGACCTTGAAAGAACATAACCCTAACCCTCGGAACACAAGATTTTGGTTCATATTTTGGTACACAATATAAGCCACAGATTATTGGAAGTGGTACTGAGGTCTCCTGCGGCGGCTGCCAGCGCCTCTCCCGTGCTTCACGGACTCTCTTTGCCCGTCGCCTCACCATTATTCTCAACCATTTTAAAATTCTCCCTCTTCGCCTTTTCCTTTTCCATTTTTTGTCTTCTAAAAAACAGTTTTCTCTTTACTTTTATCTAATACTTTTAATTTTAAATTAAAAATTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACTACTTCTCTCTTTTCCATTAATTTCCCATTCTAATTTCAGATATAATAAAAGCTATAGACGAAGAAATAATAATAGATGATTTGGTGGCCCCACATAATTTCTTCCCCAAAACCAATTTCCCATCATTTTGATTGCCTAATTTGACTTTTCCAGATTTTAGAACTTATTTTATTTAAAGAATTCCATAATTATATATTTTTCATAATTAATAAAGTTCAATAATTGTCGAATTAATGATTGAACGAGCATACGTGATAAGGTCAATTAACTTAAGACGCTGTTGAAATCAACTAATTTTGCAATTACTACTTTTTTATTGAAAAAAAATACTACTTTTATTCTTCAAATACCCACCATCTTAATTGATCTTGCTTTCAATTTTTAAATATAATAAAATAACAATTTACCTTATACAGTTTATAACGACAAAATATTATATTTTTTTTAATATATATATAAATAAAAGAAATTAGGGAAAGAATATTAAATTTTCAATTTTTATAGATATTTTAAATGTGAGATGCATTAAGAAGGGTAATTTCCAAATTATGCACGTAATTTTATTACTTTTATAAAGTTTTTTTTTTCGTAAAAAGAAAACAAAAAAAAGGACGCTTTTAATAGGTTGATGAAAGGGTGACTTAAAAAAGAGAACTATAAAGCTAAATTTTCTTTTTGAAGAGTCAATTTACTATACCAATTACTAAACTGGGGGCTATAAGAATGAGTTCCAAATAATTATAAGTAAATTAATTAAATTAATACCCTTTCCAATTATTCGATCATACACTTTAAGCAAAATAAATCTTTTTGTCGCCCACAGTTCTCCCTCTTTAACCAACGTGGAATCTCAAAATTCAACTTTTTTGGAGGCTAGCATGGTAAATTGCCTGGTGTCTAACTCTATATCATTTGTAACCGTTCAAGACCAACACTACAACCAATGTTGGATCTCACAATCCATCTGATTCGAGGCCTAGTGTCATAGTTCTACTTTTTCAATTGGGAAGTTGCGTAACCTCGCGTGGCCGGATGGGCGCTACTTCCCTTGTCACAACGTGAAGGTCACAATCTACTCTCTTCATAGTTAAGTTGTGACACTTAGCATCCTCGCTGACACACTGTTAGGTGTTTGAATCTATATCATTTGTAACAACTCAAGCTCATCGCTAACAGATATTATCCGTTTTGGCCTGTTGCATATCGTCGTAGGCCTCACGATTTTAAAACGTGTTTACTAGAGAGAAGTTTTTATACCCTTGTAAGGAATGTTTTGTTTCCCTGTCTGACACTGGAAGAGAAAGAGATTCGTTTTGATTATGTGCTTGCTTATTGGATTGAGTGCGGGGTAGATGCTTCTGACCAAACCGCTCTCTGCTTCACCCAAGATGCTGTTTTATTCTATGGATTATAGAAGTTAACATTCGTCAGGAAACTACGATTTCGTTAGTGTTTCGGGAAAAGGGAAATGAGGCGTTAAGAAAAGGAAAACAAAGCGCCCCTCTTCTTGTCGAGCTGCTTACTCCTATTTAGTCTTATAATCTAAATTATTTATAGTTTGAATAAAGTGAATTAGTTATATATATGGATTTGCTTTTAATCCATGTATTTTGAATGAATTAGTATTGTGATTGAAGTTAATTAATTGAGAGTAAAAGGATGATAATGGTTAAATGAATTATTAAGAAGAAGAGAGAAGGGAAGTTAATGGGGTGAGCGTTATGTTGAGGTATTTTATGCTTGGGTGTGACACAAATTAGATGCGACATTAACAGCTCATTTCATATGATACTATCAAAAAGGACGATATGACTTGATTGTGATAAGCCCTCTAACTCTCTAACCCCTTCCTCCAATTAAATTATTTTTCATTTTCCGACCCCTATGTATTATGATCACATTCCGACTTAATCATAGGTACTTTAATAGTCAAGCCTCCTTTAGAGTGTAACAGCTCAACCTCATCGCTAACAGATATTATCTGCTTTTCCCGGTTATCTATAAAGAGATTCCTATCCCCTAGTGATGTAACAACACAAACCCGTTGCTAACAAAATTACTTCCTAGTTTTAAAACGCATCTAATGAGGAGAGATTTTCACACTCTTATAAGGAATACTCTATTCCTCTCTCCAACCAATGCGAGATCTCACAATCCACCCTCGTGGCCTAGCGTCCTCGCTGGTTCACTCCTCGGTATTTGTCTCTGAAATCATTTGTAGCGGTCTCAAACCCACCGCTAACGAGATTATCCATTTTAGCTCATTATGTTTTGAAGTTAGTCTCACAGTTTTAAAACACATCTGGTAGAAAGAGTGTTCTATATTTTTCAAAGGAATGCTTCTTTCATTTCTCCAATCCACGTGAGATCTCATACGTGAGACACTCTAAAAATTTTACTTAGATTCATCTGAGCGAGGACCAAACACGTTAGAATGACTTAGGTAATTGGGAAATGGAAAAAATGGAAAGCACCTGGGGATGGAGCGTATGAGCAGTAGTAATAAGTAGGTATGTATATATGTTTATAATATATGGTTTAATGCATGGGGAAGATGCGAGGACCAGCACACGCACTGCCCTCTGCACACTACAATACATTACACTAAAGCATTTCAGAGTTGCAGTGAGAGTGAGTGAGTGAATGAATGATGAATATGGAACATGGAGTGGTACTCTCTGTCTTCTACTTGGACTTGGACTTGTCCTATTCCAAACCCCTCAAGACCTTCCCAAACCCTAACGCCGCCCCTAATGCCCCCCGGGGGCGCCGGGTTGGGGCAAATGGGAATGCCCCCACGCACCCTTTCTTAACTTATAAAAAATATTTACTTAAATAAGTTAAAAATGCTTTAATTAAATGTACTTCTTATATTCAAATTGGAATTGGATTTGGAACACACATTCTATTTGTAAAGGATACTTAATTTGGTAATATTTCTATAATTAATTAATTAATTCAGGATTATAAATATATATATATATTAAAAAATGTTTCAAATCAACAACAGTCCCCCTAATTGCTAGCCTTCTTGTTTGCTTTTTGCAATTATCTCAATTATTTTACTTTTTTTTTTATTACTTTGAACAAAGGAAGACTTGTCAACTACCACCTAAACCCCAAGCAAAATAAGCAAAAAAAAAAAAAAAAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAAAAAAAAAAAAAGAAGAAGAAGAAGAAAAAACCAGAGATTTTTATTTTTATTTTTTCCCCTTTTCTCCATCCCCACGTGAAATCCGACATCGTTTCATCTTCTTCTTCCTCGGCCATGTCCCCTACATGCAAATAGATTCACTTAAAGCTCTCCCTGAACTCCGATTTTGAAAAAAGCTTCCTAATTTCCCCTTATTTTTCATACCCATTTGTGAAAACAAAATGCCCTGGTCTTGATCATGGAGAACAGCCGATTGTATCCGTTTTCCGGCGAGTTGTAAGGCCACGTGGCGGCGGCGATCTAGATTAG

mRNA sequence

ATGGTTCCCTTCCCTAGCTGGCTGTACTACGTCTACATTCACTTAAAGCTCTCCCTGAACTCCGATTTTGAAAAAAGCTTCCTAATTTCCCCTTATTTTTCATACCCATTTGTGAAAACAAAATGCCCTGGTCTTGATCATGGAGAACAGCCGATTGTATCCGTTTTCCGGCGAGTTGTAAGGCCACGTGGCGGCGGCGATCTAGATTAG

Coding sequence (CDS)

ATGGTTCCCTTCCCTAGCTGGCTGTACTACGTCTACATTCACTTAAAGCTCTCCCTGAACTCCGATTTTGAAAAAAGCTTCCTAATTTCCCCTTATTTTTCATACCCATTTGTGAAAACAAAATGCCCTGGTCTTGATCATGGAGAACAGCCGATTGTATCCGTTTTCCGGCGAGTTGTAAGGCCACGTGGCGGCGGCGATCTAGATTAG

Protein sequence

MVPFPSWLYYVYIHLKLSLNSDFEKSFLISPYFSYPFVKTKCPGLDHGEQPIVSVFRRVVRPRGGGDLD
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CmoCh09G003210CmoCh09G003210gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmoCh09G003210.1:exon:4604CmoCh09G003210.1:exon:4604exon
CmoCh09G003210.1:exon:4603CmoCh09G003210.1:exon:4603exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmoCh09G003210.1:cdsCmoCh09G003210.1:cds_2CDS
CmoCh09G003210.1:cdsCmoCh09G003210.1:cdsCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CmoCh09G003210.1CmoCh09G003210.1-proteinpolypeptide