CmoCh08G001580.1 (mRNA) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh08G001580.1
TypemRNA
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
LocationCmo_Chr08: 919192 .. 919839 (+)
Sequence length297
RNA-Seq ExpressionCmoCh08G001580.1
SyntenyCmoCh08G001580.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGGAAAAGGAAAAGGGAAAGGAAAAGGAAATTCACGTTCCAGCATCGTCAAGTCGTTCATGAAAACGTCGGTAACAAGCATATCCCATCTCTATCAAGTATCAACATTATTTACGTTTGGTCATCTGCCATTAGTTTGTTAGAACAATTAGCTTAAGAATTTTATTCATTCATGTATTATGCGAAAAGACGGGGAACCAAATGAAGGGTTTGGATTCTTCCCGTGTTTCATTCTGACTGCAACAAGACGATCGTGTCGGGGAAGCACGTAGCCTCCTACGACACTGTCTTGTTTCGATATGATTAACCGTGAACGGTTCAAAAGATTGATTTTATATCTTTTGAGCTTCACAATTTGTGGTTGGTGAAGAAGGGAGTGGGATTAGTTAGAAAAAGATATCTGTGTAATATGTTTGAGCAAAATTATTGGGTGTTCTTCTGCTGTTCTTTCACATATCATTATCAGTTGGGGTTCTTTTTGGTTATTAGGATTCTCTGGCTTACCATAATATCACCTCTTTTCCTCTTTCCAGTCTGTGTATGGAATCCAAAGCCTCCTAATAATTTCATGTCTTTCTTACCTTTTGAATTTTCTTCTTCCTTTTCTGTGGGTTTCTGTCATAAAGTTGCTCATGGCTGGCGGTAG

mRNA sequence

ATGAGGAAAAGGAAAAGGGAAAGGAAAAGGAAATTCACGTTCCAGCATCGTCAAGTCGTTCATGAAAACGTCGGTAACAAGCATATCCCATCTCTATCAAGTATCAACATTATTTACGTTTGGTCATCTGCCATTAGTTTGATTCTCTGGCTTACCATAATATCACCTCTTTTCCTCTTTCCAGTCTGTGTATGGAATCCAAAGCCTCCTAATAATTTCATGTCTTTCTTACCTTTTGAATTTTCTTCTTCCTTTTCTGTGGGTTTCTGTCATAAAGTTGCTCATGGCTGGCGGTAG

Coding sequence (CDS)

ATGAGGAAAAGGAAAAGGGAAAGGAAAAGGAAATTCACGTTCCAGCATCGTCAAGTCGTTCATGAAAACGTCGGTAACAAGCATATCCCATCTCTATCAAGTATCAACATTATTTACGTTTGGTCATCTGCCATTAGTTTGATTCTCTGGCTTACCATAATATCACCTCTTTTCCTCTTTCCAGTCTGTGTATGGAATCCAAAGCCTCCTAATAATTTCATGTCTTTCTTACCTTTTGAATTTTCTTCTTCCTTTTCTGTGGGTTTCTGTCATAAAGTTGCTCATGGCTGGCGGTAG

Protein sequence

MRKRKRERKRKFTFQHRQVVHENVGNKHIPSLSSINIIYVWSSAISLILWLTIISPLFLFPVCVWNPKPPNNFMSFLPFEFSSSFSVGFCHKVAHGWR
Homology
The following BLAST results are available for this feature:
BLAST of CmoCh08G001580.1 vs.
Match NameE-valueIdentityDescription
BLAST of CmoCh08G001580.1 vs.
Match NameE-valueIdentityDescription
BLAST of CmoCh08G001580.1 vs.
Match NameE-valueIdentityDescription
BLAST of CmoCh08G001580.1 vs.
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CmoCh08G001580CmoCh08G001580gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmoCh08G001580.1:exon:6482CmoCh08G001580.1:exon:6482exon
CmoCh08G001580.1:exon:6483CmoCh08G001580.1:exon:6483exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmoCh08G001580.1:cdsCmoCh08G001580.1:cdsCDS
CmoCh08G001580.1:cdsCmoCh08G001580.1:cds_2CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CmoCh08G001580.1CmoCh08G001580.1-proteinpolypeptide