CmoCh05G007690.1 (mRNA) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh05G007690.1
Type	mRNA
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	DExH-box ATP-dependent RNA helicase DExH10
Location	Cmo_Chr05: 4354287 .. 4362417 (+)
Sequence length	2857
RNA-Seq Expression	CmoCh05G007690.1
Synteny	CmoCh05G007690.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTGGAGATGGGAACAATTAAAGATATGATTTTGGGCAAACCAGCTCCTCTTGTTAGTACTTTTAGACTGAGCTACTACTCGATTTTAAATTTAATGAGCCGGGCTGAAGGCCAATTTACAGCTGAGCATGTTATTAGACACTCATTTCATCAGTTTCAGCACGAGAAGGTTGTGGTTAAATCCTTTCTATTTGAATTAGCATAATGGGATATTGAAAAAGTACTTCCTAATAATCTCATTTTTAGGCATTGCCTGATATTGGGAAAAGAGTGTCGAAGTTAGAGGAGGAAGCTGCCACACTTGATGCTTCAGGAGAGGCAAGTTTTGTCCTATTTATTTTTATGTAGTTGTTAATATTTTGATCATTTACTAGAATTTTAACTATTATGCTTTATCCATTTAGGCTGAAGTTGCTGAATACCACAACTTAAAGCTTGATATAGCACAACTTGAGAAGAAGATGATGTCTGAAATAACAAGGCCGGAAAGAGTTCTCTATTTTCTTCTTCCTGGTCGGTTGGTATGTACTAGGGGTGTAGGAAATTCATTTATAAGAGGTGTTGATAAGCCATCTTGCCTAAACCTAATGTCCGCTTCACAATCCAAATCAGTAAAGATGAGGCAAATGATTGAAAAACTATTTTGTATGCAAAATTTGATTTTCAAGCATAAATTTTGATGAGTTATAGCACCCCTTGGTGAATGGTCTCTAAGTACCACCTACCAGAGGTCGCATATTTGAATTTTCGTGTAAGCATAATATGAAAAGCCCTTAATGTCTCCAGGGTCTGAGGGCATGGATTCTCTTAAGAGGAAAAAAAAAAAAAAAAGAATTATATGTGTCTAATACCAATCTATTTTATCATCTTTTAAATGCATGTATTTGATTGTTAGTGAAAATGAACAACCTTTTTTGTTTAAGATTTAATAGAAAATAATTATGCATGTCAAAATCTTTTGATATTACTTTTGCTTTTTAAATCTATTTCATTAGATGCTAGACTGTTACCCGTACTTGGCAACTTGGTTAAGATTGGTTATTCTGAATTGCAGGTTAAGGTAAGAGAAGGGGGGACAGACTGGGGTTGGGGAGTTGTAGTTAACGTTGTTAAAAAGCCCTCAGCTGGGTTAGGCATCTTGCCTTCACGTGGTGGTGCTTATATAGTGGATACCTTACTCCAATGCTCTCCTTGTCTAAGCGAGAATAGTTCACGACCAAAACCTTGTCCACCCCGTCCTGGAGAAAAGGGTGAAATGCACGTGGTTAGTTTTTCATGTTTAAGCTGGGGCTTCTTATATCTTGATTTTAATTTTGTAAATCCTTTTTTGATCTTATTATTTTGGTGTGATGGTGGTCCATTTAAAATGTGAGATGTCATCGTTGTTATTACGTTTTCAGGTTCCAGTTCAGCTGCCTCTTATTTCAGCCTTGAGCAAACTCAGAATCTCTATTCCTTCTGATCTCAGACCCGTGGAAGCAAGGGAAAGCATACTGCTTGCATTGGAAGAACTGGGAACTCGTTTTCCACAGGGTTTTCCAAAATTGAATCCAGTTAAGGTAAAAATTAGCTGCTTACTTATATTTGAATAATTGTATGTTATATCTTTCATGAAAGTGTTAACGAATCAAGACTTTTTACAGTATAAACTCGTTTCTCTATATATGTTTTTGATGAGGAACAAGAGTTTTGTTCAGTATAATGAAAATTACAAATCCTCCAAAGGATTACAAAAAATCTTATTGGAAGTAACAACCATAGGGGGAGGAAGAACTCTTTGAACGAAGAGAAGCATATCTTTTCAATACTTCAAGTTTTCTACCTCATTGCATACTTGAGATTAATTGGCGACGTCTCTGCATCATGACTTCCTTTTTTGTTTTTGCCAATCAAGCAGATTAGTTAAGATACAGAATTATGCTCTGTTTTAATTTAGGGGATGCATATTAATTATTGAAGAATAATCAAACGAAGCATCCAGTTTGCATCAAGAATGAATCCTCAGTGCCAGCTGATCAACTTAAGGGCTTTTTTTCTTTCCATTTAATTTTTTTTTTAATAATTTTAACAATAAGTAATTGAGTTTTCTTTGCATGTCAATTGAACTTGTAGTCCTCTTTTCTTTTTCTTTATAAATGTAGTGCTTTATGTGTACTTAAAGACATATTCGAGAGAAAAACTGTACTGGCAATTCAATGTTCTTTTGGCTCATTCTCAGGACATGAGTATTGAAGATCCAGAAATTGTTGAGTTGGTGAAGCAGATTGAGGAACTTGAGCGGAAATTATATGCTCATCCTCTGCATAAGGTATATAAAAAAAGGTTTTTTCTTTTATCGTGGAGTACTTGCATAAAATATTCTTTAGAGAGTTTTATGGTTGCTCCATTGATTACTGCAGTCACATGAAGTGGACCAGATTAAATGTTTTCAGAGGAAAGCGGAGGTTAATCATGAAATTCAAATACTCAAGACCAAAATGCGCGATTCCCAGGTATAGTTGACGTTTCTTTAACTTTCCATGATTTAATTACCTCTTATCTTGTTTCCTAAGTACAATAGGACGCCTCTGTAATTGCTTCGTTTGACACAAAGTGTAACCAGGTACTTAGATGCCTTCCGACTAGGATTTACCTTTATGCTTTGTTTGAGTCGCATGGATTTTGTCTAAGATTTATTTTTTAATATTTTCTTTTGTTAAAGTGGTCAAATTTTAGGCACTGCGCTCCATTTTCCTGTAACTCCATTTACAGATTAAGAAAAAAGTTAAAATAGGAAGAAATGTAACTTGTCTGTTTTCCCTTGCATAATTTTGTTTAATCAATTTGCAAAAGCATCATACGGAGAAGCACACACAAAGAGTATTGACCATGCTCATCAGATCTGTGTACCTGGCTTTGAACAACTTTTTTTTTTTTTTTGCTTCAACATGCAGCTTCAAAAATTTCGTGATGAACTGAAGAACCGTTCTCGGGTCCTGAAAAAGCTTGGTCACATTGATGCAGATGGTGTAGTTCAGTTGAAGGGGCGTGCAGCCTGCTTGATTGACACAGGAGATGAGCTCCTTGTTACTGAATTAATGTTTAATGGTGAGTCTGGGTGCATATTCTTCTGATTATCATATTCACTTCAATTATTATCAGTTTTGAATGTTTAAAGATTTGATGGATTAGTGAACCTCAAAAGCTGACCTTCATATTCAAATTTTTACCATATAATTTGACTATATTATATAAATATTACAATCAATTTTAAAAGCAAGAGGCACACTAGAAAACAATTGTTTCTAGAGTTTAAGCTTGTGGTGTAAAAAAGGTGAGATCTTTATGTGAGCAGCACAATAGTAAAATGCCAATAATTTTTTACTGGTATAAATGATATTATAATGAAAAAAAGAAAAATTAGAGGGTTTTTAGAAGTTTAAGGAGAGAAATAACATTTTTAAAAATTATTACTTGATTTATTTATAAAAGATAAAAAAAAAAGGGATTTAAGGTGCTCAGGCGCATGCTGAGAAGCCTTATTAAGGATACACAGCGTCCTGAAGAAAGGTGTCCTTGCATTTCTGGAAAGTGTGACCACTCGATAAAACAGTGATTAAAGTCTATTCTCCCTCTGAATGATGTCAAAAATGCATTTTATTTACTTGCGCATGCTGCTTTTGAATCTAAGTTGTGCATATGCTTCAGTTGAGAGATCTTTTGCTGTGTTCAACAAGGTAAATTATAGTGTTTATTATCTCAGGGAGATTCTATGCTCCACATGATGTTTGCTCTAGGTCTGTTGGATAATCTCTAGATCGTTGCTCTTGACTTGGGCAATGTTTTTGGAGCGTTGGGTTGAAAGTAATCGCTTTATGATTGTAGTTGTGAAGTCAGATTGTGGACAGTACTGGTCACATATCTATGCTTGGCCTTTTTGTTTTTCAATTGTAATTATTTATATTCATTGAACTTGAGCGTGAACATAACTTAAATCGTTAGAACATTATATCATCGATCAGAAGATTAGAGATTTGAATTTTCATCGCAACTTGTTATTATAAAAGTTCTCTCTTTCTTGATTCAAGCCAACTGGAATGCTTTAAGTTTTTCAGTTTGTACCTCTTATACCTAGAAAAGTTATATTTTGTTACAATCTCAACAGGAACATTCAATGACCTAGATCATCACCAGATTGCATCCCTTGCAAGTTGTTTTATACCAGGAGACAAGTCCAATGAGCAGATACAGTTAAGAACCGAGCTTGCTAGACCATTACAGCAACTCCAAGATAGTGCGAGAAGAATAGCTGAGGTTTTAAACCGCTGAGCACCTAGTATTTATTCTTTTTTAAGGGCGTTTTTAATTTATTTCCAAATGCAATCATATTTTATTTGGATATAGATACAACATGAATGCAAGTTGGAGATAAATGTGGAAGAATATGTGGAATCAACTGTAAGGCCGTATTTGATGGATGTCATTTACTGTTGGTCAAAGGTTAGTATATTTTTTGTATAATTTTATAATGAGAACTGACGGCTGATTTTGTTTATTTTGATGCGTTTACATGCTTCATGCAACACGAACACATTCATGTATATTATGCATTTACTTGCATTTAGTCATCTTATTTGCAGAAATCAAAATTTCAATTCCTTCGATCTTGGATTTATCAATAATACAAGCAATTCTGGATCTTTTTTATCTCTTCCTATATAGACTAATTTTCTGATGTTTTTGTTATGCGGACGAAGTACGATAGAATGATGCATCTTGTATCTTGTTTCATGCACTAGGCATACATGGAAGTTCTAAACTGATCAAGTAAAACTACAGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAAAAAAAAAAAAAAAAGAACAAAACAAACAAACAAACAAAAAGATCCTATATACATCATCAATACATGCTATAACACACCCCTCTAACTGGAGCATGTATTTCCACTCATCATAGTCTGCCAAATTAAAATATCATGAATTGAAACAGCATGAAATTATAGAAATAATTAAACAGCCATGCCTTAATAGACTTGTCTTTGTCATGTCCATGTTGGAGTCTTTTAAACAATAATGTTTTACCATGTTCATATTGTGTCTTGTCCATGATATTTAAACAGTGCATATCTTAATAAACATGTTTTATGTTTTAGACTCTTGAGCAGTGTTTTATGTTCTAGCCTCTTGAGCAATAAGGTTTTACTGTGTCCATGGTGTGTCTTGTCCATCTTTGTGCTTTGTTTCCATCTTTATGCTTTCTTGGTTGTGGGAAAGAAACGTACTTTAGTAGTATTGATTTAATTAAGTTTACCATAACCCATTAGCATAAGCTTTTAGGTTGATTTGATGATTTAACATATATCAGTACAAGAAGTCTTGTATTTGAACCCTTATAATTCAATTTCCTCTCCAATTATTATTGATCTACACTTGTTGGGTTTTCTACAAATTTTCAAGGCCACAAGTAAGGAGTGTTGTAGTATTGATGTAATTAATTTTTTGTAACTTGATCTTAGCCACATGTTGCTCAAGAGGCATATGTTGCTGTATCATGCTACACTTGATCTTAGCCAAAAGGCCGAGAAAGATATGAAAATTAGTAATTTGGGGAAGTAAGAAGCAAAATGTGGTGGCAGATGAGTGTTCAATGCAATGTGGAAAAACTCATTTTGCTCGCAATTGTACTTCTCTAGCACTACTTTTCAATGCGGAGCATTTTCTAAATGATTTCTTTCACTAGGAAGGACTAACAACATATTACATTCTAAAACTGATTGTCCCAATGTTGTCAAGTCCCTCAAATTTGCTGGTTATCATTTTTTGGATGCTCAAAACACTTATGTTATTTATTCTACAATGTAATGATGGCTTTCTTCATACAGGGAGCGAGTTTTTCAGAGGTGATTCAAATGACAGATGTTTTCGAGGGTAGTATCATTCGAAGTGCTAGAAGGCTTGATGAATTCTTGAATCAGGTACAAACAAATAAAATATATATTTATAAACTACTTATTTCTGCTTTCTCATGCTTGAAAGCCTGAACCCCTTTCACAACGAAACCTGTTTCACAGGCTGTGAAAACCTAGGAAAATCATTTTTTGATTTTATATAGTTGTCAAAGTAATAAAGAAACTTGGGCTATCCATGAATAAAAGGGTTTTTGCTTCTTCTTCTTCTTCTTCTTCTTCTTTAATTCAGTTGCGTGCTGCTGCCAATGCTGTGGGGGAGGTAACCTTAGAGAGTAAGTTTTCTGCGGCCAGTGACAGCCTCCGCAGAGGTATAATGTTTGCAAACTCACTCTATCTGTAGATTGCCCTCTGCTTTGGTTGCATCTTTAGGGGTTTATGAAGCTCTGGGGTTGTGGATTTCATCAACCATCTGTCATTGAGGTATGCTTTCTTTTTAATGTATAAGATGTACTGTAATACAATTTTTTGGATATTTTAGCATTCACTAGAAAGAACAGATATTACAATCTGAGAGGCTAACCAATCACGCGAAACACTAACAGAACTGTTAGTGTAAATGTTTTACACAATTTTTAGTTGTTGTTTCCTTGGAGAAAAATTGTTAAGTTTAGCTGTCCTAGTGGAAATCTAGTTCTTAAATCCTACATTTTTATTGGTTTATTAATTTACCGATGGTTCTGGAAAATTTACCACATGGTTGAATGATTGGAAATTCACGAGTTGCACATTTTCAAAATAAATTTTGTGGTGAGTTGAGATTTTTATTGGACAAATTTGAGGACTGAAACTTGTGACCAACTTTGAGTCCGTGTTTTTCTTAGGATCCCTCCTTTCCCACTTACAATTACTTGCTCCGAGTATACAACTTTGTGCAGTATGACAAAGATAAATAGTGCACGACTTTACTAGTTGACACACAACTTTCTCGAGCGAAATTACATATGATTTTTGTGATGCTCCTTTTGAGTGTTCTTATGTTGGTTTGGGGCCTTTTTTTTTGCATTCTTAGTATTTGACAGAAGATGCACCTCCTTGCCCTTTTTTTGTGTACTCCTTTTTTATACTGAAATCTTTGTAACTCGAAAAAATATATATCAGTAGGCCACATGTTTATTAAGAAAACTGATTATCTATCTATATGTTTGTGTACTCTCCCTTTTTATACTAAAATCTTTGTAACTTATAGAATTTGATTGATGATATTAAAATTGTACTGAGAGTTGGGGTTCTCCACATTTGGAAGGTCTCAAGACAGATGGATATTGAATTAGCGGTAATGTAATAGAAAGATTATGTGCTCTGTTGTTCATGGTGCTTCTCAAATTGATTATGTTCTCTGTTGTTTTACCCTGACTGTCACCTCCTCATTTACTGCCGGCGCCCGCCCAGAAGGCCCGCTACCGCCTGTCAAGGCTGCTTATTGGAGAGAACCTGGAGAATTTTTAGAGGCATTGGATAAGTCCAAGAAAATGAAAGCTAAAAACAAACTGCAGCAAAGGAAACCAAACTTTGCTGAAGAATGCCCCATACTGACACAG

mRNA sequence

GTGGAGATGGGAACAATTAAAGATATGATTTTGGGCAAACCAGCTCCTCTTGTTAGTACTTTTAGACTGAGCTACTACTCGATTTTAAATTTAATGAGCCGGGCTGAAGGCCAATTTACAGCTGAGCATGTTATTAGACACTCATTTCATCAGTTTCAGCACGAGAAGGTTGTGGCATTGCCTGATATTGGGAAAAGAGTGTCGAAGTTAGAGGAGGAAGCTGCCACACTTGATGCTTCAGGAGAGGCAAGTTTTGCTGAAGTTGCTGAATACCACAACTTAAAGCTTGATATAGCACAACTTGAGAAGAAGATGATGTCTGAAATAACAAGGCCGGAAAGAGTTCTCTATTTTCTTCTTCCTGGTCGGTTGGTATGTACTAGGGGTGTAGGAAATTCATTTATAAGAGGTGTTGATAAGCCATCTTGCCTAAACCTAATGTCCGCTTCACAATCCAAATCAATGCTAGACTGTTACCCGTACTTGGCAACTTGGTTAAGATTGGTTAAGGTAAGAGAAGGGGGGACAGACTGGGGTTGGGGAGTTGTAGTTAACGTTGTTAAAAAGCCCTCAGCTGGGTTAGGCATCTTGCCTTCACGTGGTGGTGCTTATATAGTGGATACCTTACTCCAATGCTCTCCTTGTCTAAGCGAGAATAGTTCACGACCAAAACCTTGTCCACCCCGTCCTGGAGAAAAGGGTGAAATGCACGTGGTTCCAGTTCAGCTGCCTCTTATTTCAGCCTTGAGCAAACTCAGAATCTCTATTCCTTCTGATCTCAGACCCGTGGAAGCAAGGGAAAGCATACTGCTTGCATTGGAAGAACTGGGAACTCGTTTTCCACAGGGTTTTCCAAAATTGAATCCAGTTAAGGACATGAGTATTGAAGATCCAGAAATTGTTGAGTTGGTGAAGCAGATTGAGGAACTTGAGCGGAAATTATATGCTCATCCTCTGCATAAGTCACATGAAGTGGACCAGATTAAATGTTTTCAGAGGAAAGCGGAGGTTAATCATGAAATTCAAATACTCAAGACCAAAATGCGCGATTCCCAGCTTCAAAAATTTCGTGATGAACTGAAGAACCGTTCTCGGGTCCTGAAAAAGCTTGGTCACATTGATGCAGATGGTGTAGTTCAGTTGAAGGGGCGTGCAGCCTGCTTGATTGACACAGGAGATGAGCTCCTTGTTACTGAATTAATGTTTAATGGAACATTCAATGACCTAGATCATCACCAGATTGCATCCCTTGCAAGTTGTTTTATACCAGGAGACAAGTCCAATGAGCAGATACAGTTAAGAACCGAGCTTGCTAGACCATTACAGCAACTCCAAGATAGTGCGAGAAGAATAGCTGAGATACAACATGAATGCAAGTTGGAGATAAATGTGGAAGAATATGTGGAATCAACTGTAAGGCCGTATTTGATGGATGTCATTTACTGTTGGTCAAAGGGAGCGAGTTTTTCAGAGGTGATTCAAATGACAGATGTTTTCGAGGGTAGTATCATTCGAAGTGCTAGAAGGCTTGATGAATTCTTGAATCAGTTGCGTGCTGCTGCCAATGCTGTGGGGGAGGTAACCTTAGAGAGTAAGTTTTCTGCGGCCAGTGACAGCCTCCGCAGAGGTATAATGTTTGCAAACTCACTCTATCTGTAGATTGCCCTCTGCTTTGGTTGCATCTTTAGGGGTTTATGAAGCTCTGGGGTTGTGGATTTCATCAACCATCTGTCATTGAGGTATGCTTTCTTTTTAATGTATAAGATGTACTGTAATACAATTTTTTGGATATTTTAGCATTCACTAGAAAGAACAGATATTACAATCTGAGAGGCTAACCAATCACGCGAAACACTAACAGAACTGTTAGTGTAAATGTTTTACACAATTTTTAGTTGTTGTTTCCTTGGAGAAAAATTGTTAAGTTTAGCTGTCCTAGTGGAAATCTAGTTCTTAAATCCTACATTTTTATTGGTTTATTAATTTACCGATGGTTCTGGAAAATTTACCACATGGTTGAATGATTGGAAATTCACGAGTTGCACATTTTCAAAATAAATTTTGTGGTGAGTTGAGATTTTTATTGGACAAATTTGAGGACTGAAACTTGTGACCAACTTTGAGTCCGTGTTTTTCTTAGGATCCCTCCTTTCCCACTTACAATTACTTGCTCCGAGTATACAACTTTGTGCAGTATGACAAAGATAAATAGTGCACGACTTTACTAGTTGACACACAACTTTCTCGAGCGAAATTACATATGATTTTTGTGATGCTCCTTTTGAGTGTTCTTATGTTGGTTTGGGGCCTTTTTTTTTGCATTCTTAGTATTTGACAGAAGATGCACCTCCTTGCCCTTTTTTTGTGTACTCCTTTTTTATACTGAAATCTTTGTAACTCGAAAAAATATATATCAGTAGGCCACATGTTTATTAAGAAAACTGATTATCTATCTATATGTTTGTGTACTCTCCCTTTTTATACTAAAATCTTTGTAACTTATAGAATTTGATTGATGATATTAAAATTGTACTGAGAGTTGGGGTTCTCCACATTTGGAAGGTCTCAAGACAGATGGATATTGAATTAGCGGTAATGTAATAGAAAGATTATGTGCTCTGTTGTTCATGGTGCTTCTCAAATTGATTATGTTCTCTGTTGTTTTACCCTGACTGTCACCTCCTCATTTACTGCCGGCGCCCGCCCAGAAGGCCCGCTACCGCCTGTCAAGGCTGCTTATTGGAGAGAACCTGGAGAATTTTTAGAGGCATTGGATAAGTCCAAGAAAATGAAAGCTAAAAACAAACTGCAGCAAAGGAAACCAAACTTTGCTGAAGAATGCCCCATACTGACACAG

Coding sequence (CDS)

GTGGAGATGGGAACAATTAAAGATATGATTTTGGGCAAACCAGCTCCTCTTGTTAGTACTTTTAGACTGAGCTACTACTCGATTTTAAATTTAATGAGCCGGGCTGAAGGCCAATTTACAGCTGAGCATGTTATTAGACACTCATTTCATCAGTTTCAGCACGAGAAGGTTGTGGCATTGCCTGATATTGGGAAAAGAGTGTCGAAGTTAGAGGAGGAAGCTGCCACACTTGATGCTTCAGGAGAGGCAAGTTTTGCTGAAGTTGCTGAATACCACAACTTAAAGCTTGATATAGCACAACTTGAGAAGAAGATGATGTCTGAAATAACAAGGCCGGAAAGAGTTCTCTATTTTCTTCTTCCTGGTCGGTTGGTATGTACTAGGGGTGTAGGAAATTCATTTATAAGAGGTGTTGATAAGCCATCTTGCCTAAACCTAATGTCCGCTTCACAATCCAAATCAATGCTAGACTGTTACCCGTACTTGGCAACTTGGTTAAGATTGGTTAAGGTAAGAGAAGGGGGGACAGACTGGGGTTGGGGAGTTGTAGTTAACGTTGTTAAAAAGCCCTCAGCTGGGTTAGGCATCTTGCCTTCACGTGGTGGTGCTTATATAGTGGATACCTTACTCCAATGCTCTCCTTGTCTAAGCGAGAATAGTTCACGACCAAAACCTTGTCCACCCCGTCCTGGAGAAAAGGGTGAAATGCACGTGGTTCCAGTTCAGCTGCCTCTTATTTCAGCCTTGAGCAAACTCAGAATCTCTATTCCTTCTGATCTCAGACCCGTGGAAGCAAGGGAAAGCATACTGCTTGCATTGGAAGAACTGGGAACTCGTTTTCCACAGGGTTTTCCAAAATTGAATCCAGTTAAGGACATGAGTATTGAAGATCCAGAAATTGTTGAGTTGGTGAAGCAGATTGAGGAACTTGAGCGGAAATTATATGCTCATCCTCTGCATAAGTCACATGAAGTGGACCAGATTAAATGTTTTCAGAGGAAAGCGGAGGTTAATCATGAAATTCAAATACTCAAGACCAAAATGCGCGATTCCCAGCTTCAAAAATTTCGTGATGAACTGAAGAACCGTTCTCGGGTCCTGAAAAAGCTTGGTCACATTGATGCAGATGGTGTAGTTCAGTTGAAGGGGCGTGCAGCCTGCTTGATTGACACAGGAGATGAGCTCCTTGTTACTGAATTAATGTTTAATGGAACATTCAATGACCTAGATCATCACCAGATTGCATCCCTTGCAAGTTGTTTTATACCAGGAGACAAGTCCAATGAGCAGATACAGTTAAGAACCGAGCTTGCTAGACCATTACAGCAACTCCAAGATAGTGCGAGAAGAATAGCTGAGATACAACATGAATGCAAGTTGGAGATAAATGTGGAAGAATATGTGGAATCAACTGTAAGGCCGTATTTGATGGATGTCATTTACTGTTGGTCAAAGGGAGCGAGTTTTTCAGAGGTGATTCAAATGACAGATGTTTTCGAGGGTAGTATCATTCGAAGTGCTAGAAGGCTTGATGAATTCTTGAATCAGTTGCGTGCTGCTGCCAATGCTGTGGGGGAGGTAACCTTAGAGAGTAAGTTTTCTGCGGCCAGTGACAGCCTCCGCAGAGGTATAATGTTTGCAAACTCACTCTATCTGTAG

Protein sequence

VEMGTIKDMILGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIRHSFHQFQHEKVVALPDIGKRVSKLEEEAATLDASGEASFAEVAEYHNLKLDIAQLEKKMMSEITRPERVLYFLLPGRLVCTRGVGNSFIRGVDKPSCLNLMSASQSKSMLDCYPYLATWLRLVKVREGGTDWGWGVVVNVVKKPSAGLGILPSRGGAYIVDTLLQCSPCLSENSSRPKPCPPRPGEKGEMHVVPVQLPLISALSKLRISIPSDLRPVEARESILLALEELGTRFPQGFPKLNPVKDMSIEDPEIVELVKQIEELERKLYAHPLHKSHEVDQIKCFQRKAEVNHEIQILKTKMRDSQLQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQIASLASCFIPGDKSNEQIQLRTELARPLQQLQDSARRIAEIQHECKLEINVEEYVESTVRPYLMDVIYCWSKGASFSEVIQMTDVFEGSIIRSARRLDEFLNQLRAAANAVGEVTLESKFSAASDSLRRGIMFANSLYL

Homology

[Close]

BLAST of CmoCh05G007690.1 vs. ExPASy Swiss-Prot
Match: Q9ZVW2 (DExH-box ATP-dependent RNA helicase DExH10 OS=Arabidopsis thaliana OX=3702 GN=HEN2 PE=1 SV=2)

HSP 1 Score: 795.8 bits (2054), Expect = 3.1e-229
Identity = 417/552 (75.54%), Postives = 462/552 (83.70%), Query Frame = 0


Query: 1   VEMGTIKDMILGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIRHSFHQFQHEKVVAL 60
           +EM T++DM+LGKPAPL+STFRLSYY+ILNL+SRAEGQFTAEHVIRHSFHQFQHEK  AL
Sbjct: 493 MEMNTLRDMMLGKPAPLLSTFRLSYYTILNLLSRAEGQFTAEHVIRHSFHQFQHEK--AL 552

Query: 61  PDIGKRVSKLEEEAATLDASGEASFAEVAEYHNLKLDIAQLEKKMMSEITRPERVLYFLL 120
           PDIG +VSKLEEEAA L+ASGE   AEVAEYHNL+ DIA+ EKK+MSEI RPERVL FL 
Sbjct: 553 PDIGNKVSKLEEEAAILNASGE---AEVAEYHNLQFDIAKHEKKLMSEIIRPERVLCFLD 612

Query: 121 PGRLVCTRGVGNSFIRGVDKPSCLNLMSASQSKSMLDCYPYLATWLRLVKVREGGTDWGW 180
            G                                            RLVK+REGGTDWGW
Sbjct: 613 TG--------------------------------------------RLVKIREGGTDWGW 672

Query: 181 GVVVNVVKKPSAGLGILPSRGGAYIVDTLLQCSPCLSENSSRPKPCPPRPGEKGEMHVVP 240
           GVVVNVVK  S G G   S GG YIVDTLL CS   SEN ++PKPCPPR GEKGEMHVVP
Sbjct: 673 GVVVNVVKNSSVGTGSASSHGGGYIVDTLLHCSTGFSENGAKPKPCPPRAGEKGEMHVVP 732

Query: 241 VQLPLISALSKLRISIPSDLRPVEARESILLALEELGTRFPQGFPKLNPVKDMSIEDPEI 300
           VQLPLISALS+LRIS+PSDLRPVEAR+SILLAL+EL +RFP GFPKL+PVKDM+I+D EI
Sbjct: 733 VQLPLISALSRLRISVPSDLRPVEARQSILLALQELSSRFPLGFPKLHPVKDMNIQDTEI 792

Query: 301 VELVKQIEELERKLYAHPLHKSHEVDQIKCFQRKAEVNHEIQILKTKMRDSQLQKFRDEL 360
           V+LV QIEE+E+KL AHP+HKS +  QIK FQRKAEVN+EIQ LK+KMRDSQLQKFRDEL
Sbjct: 793 VDLVSQIEEVEQKLLAHPMHKSEDDQQIKSFQRKAEVNYEIQQLKSKMRDSQLQKFRDEL 852

Query: 361 KNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQIASLASC 420
           KNRSRVLKKLGHIDADGVVQ+KGRAACLIDTGDELLVTELMFNGTFNDLDHHQ+A+LASC
Sbjct: 853 KNRSRVLKKLGHIDADGVVQVKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASC 912

Query: 421 FIPGDKSNEQIQLRTELARPLQQLQDSARRIAEIQHECKLEINVEEYVESTVRPYLMDVI 480
           FIP DKSNEQ+ LR EL +PLQQLQDSAR+IAEIQHECKLEI+VEEYVEST+RP+LMDVI
Sbjct: 913 FIPVDKSNEQVNLRNELTKPLQQLQDSARKIAEIQHECKLEIDVEEYVESTIRPFLMDVI 972

Query: 481 YCWSKGASFSEVIQMTDVFEGSIIRSARRLDEFLNQLRAAANAVGEVTLESKFSAASDSL 540
           Y WSKGASF+E+IQMTD+FEGSIIRSARRLDEFLNQLRAAA AVGE +LESKF+AAS+SL
Sbjct: 973 YSWSKGASFAEIIQMTDIFEGSIIRSARRLDEFLNQLRAAAEAVGESSLESKFAAASESL 995

Query: 541 RRGIMFANSLYL 553
           RRGIMFANSLYL
Sbjct: 1033 RRGIMFANSLYL 995

[Close]

BLAST of CmoCh05G007690.1 vs. ExPASy Swiss-Prot
Match: P42285 (Exosome RNA helicase MTR4 OS=Homo sapiens OX=9606 GN=MTREX PE=1 SV=3)

HSP 1 Score: 367.9 bits (943), Expect = 2.1e-100
Identity = 214/550 (38.91%), Postives = 330/550 (60.00%), Query Frame = 0


Query: 7    KDMILGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIRHSFHQFQHEKVVALPDIGKR 66
            K ++ G   PL S F L+Y  +LNL+ R E +   E+++  SF+QFQH +  A+P + ++
Sbjct: 549  KQLLKGSADPLNSAFHLTYNMVLNLL-RVE-EINPEYMLEKSFYQFQHYR--AIPGVVEK 608

Query: 67   VSKLEEEAATLDASGEASFAEVAEYHNLKLDIAQLEKKMMSEITRPERVLYFLLPGRLVC 126
            V   EE+   +    E S   V  Y+ ++  +A+L K++   I +P+  L FL PG    
Sbjct: 609  VKNSEEQYNKIVIPNEES---VVIYYKIRQQLAKLGKEIEEYIHKPKYCLPFLQPG---- 668

Query: 127  TRGVGNSFIRGVDKPSCLNLMSASQSKSMLDCYPYLATWLRLVKVREGGTDWGWGVVVNV 186
                                                    RLVKV+  G D+GWGVVVN 
Sbjct: 669  ----------------------------------------RLVKVKNEGDDFGWGVVVNF 728

Query: 187  VKKPSAGLGILPSRG---GAYIVDTLLQCSPCLSENSSRPKPCPPRPGEKGEMHVVPVQL 246
             KK +    + P+ G     Y+V+ LL+CS    +NS+     P +P EKGEM VVPV +
Sbjct: 729  SKKSN----VKPNSGELDPLYVVEVLLRCSKESLKNSATEAAKPAKPDEKGEMQVVPVLV 788

Query: 247  PLISALSKLRISIPSDLRPVEARESILLALEELGTRFPQGFPKLNPVKDMSIEDPEIVEL 306
             L+SA+S +R+ IP DLRPV+ R+S+L +++E+  RFP G P L+P+ DM I+D  + ++
Sbjct: 789  HLLSAISSVRLYIPKDLRPVDNRQSVLKSIQEVQKRFPDGIPLLDPIDDMGIQDQGLKKV 848

Query: 307  VKQIEELERKLYAHPLHKSHEVDQIKCF-QRKAEVNHEIQILKTKMRDSQLQKFRDELKN 366
            ++++E  E ++Y+HPLH    ++ +    ++KA++  +I+  K +++ ++     DELK 
Sbjct: 849  IQKVEAFEHRMYSHPLHNDPNLETVYTLCEKKAQIAIDIKSAKRELKKARTVLQMDELKC 908

Query: 367  RSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQIASLASCFI 426
            R RVL++LG   +  V+++KGR AC I + DELL+TE+MFNG FNDL   Q  +L SCF+
Sbjct: 909  RKRVLRRLGFATSSDVIEMKGRVACEISSADELLLTEMMFNGLFNDLSAEQATALLSCFV 968

Query: 427  PGDKSNEQIQLRTELARPLQQLQDSARRIAEIQHECKLEINVEEYVESTVRPYLMDVIYC 486
              + S+E  +L  +LA PL+Q+Q+ A+RIA++  E KLEI+ E Y+ S+ +P+LMDV+Y 
Sbjct: 969  FQENSSEMPKLTEQLAGPLRQMQECAKRIAKVSAEAKLEIDEETYL-SSFKPHLMDVVYT 1028

Query: 487  WSKGASFSEVIQMTDVFEGSIIRSARRLDEFLNQLRAAANAVGEVTLESKFSAASDSLRR 546
            W+ GA+F+ + +MTDVFEGSIIR  RRL+E L Q+  AA A+G   LE+KF+     ++R
Sbjct: 1029 WATGATFAHICKMTDVFEGSIIRCMRRLEELLRQMCQAAKAIGNTELENKFAEGITKIKR 1042

Query: 547  GIMFANSLYL 553
             I+FA SLYL
Sbjct: 1089 DIVFAASLYL 1042

[Close]

BLAST of CmoCh05G007690.1 vs. ExPASy Swiss-Prot
Match: Q9CZU3 (Exosome RNA helicase MTR4 OS=Mus musculus OX=10090 GN=Mtrex PE=1 SV=1)

HSP 1 Score: 367.5 bits (942), Expect = 2.7e-100
Identity = 214/550 (38.91%), Postives = 330/550 (60.00%), Query Frame = 0


Query: 7    KDMILGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIRHSFHQFQHEKVVALPDIGKR 66
            K ++ G   PL S F L+Y  +LNL+ R E +   E+++  SF+QFQH +  A+P + ++
Sbjct: 547  KQLLKGSADPLNSAFHLTYNMVLNLL-RVE-EINPEYMLEKSFYQFQHYR--AIPGVVEK 606

Query: 67   VSKLEEEAATLDASGEASFAEVAEYHNLKLDIAQLEKKMMSEITRPERVLYFLLPGRLVC 126
            V   EE+   +    E +   V  Y+ ++  +A+L K++   I +P+  L FL PG    
Sbjct: 607  VKNSEEQYNKIVIPNEEN---VVIYYKIRQQLAKLGKEIEEYIHKPKYCLPFLQPG---- 666

Query: 127  TRGVGNSFIRGVDKPSCLNLMSASQSKSMLDCYPYLATWLRLVKVREGGTDWGWGVVVNV 186
                                                    RLVKV+  G D+GWGVVVN 
Sbjct: 667  ----------------------------------------RLVKVKNEGDDFGWGVVVNF 726

Query: 187  VKKPSAGLGILPSRG---GAYIVDTLLQCSPCLSENSSRPKPCPPRPGEKGEMHVVPVQL 246
             KK +    + P+ G     Y+V+ LL+CS    +NS+     P +P EKGEM VVPV +
Sbjct: 727  SKKSN----VKPNSGELDPLYVVEVLLRCSKESLKNSATEAAKPAKPDEKGEMQVVPVLV 786

Query: 247  PLISALSKLRISIPSDLRPVEARESILLALEELGTRFPQGFPKLNPVKDMSIEDPEIVEL 306
             L+SA+S +R+ IP DLRPV+ R+S+L +++E+  RFP G P L+P+ DM I+D  + ++
Sbjct: 787  HLLSAISTVRLYIPKDLRPVDNRQSVLKSIQEVQRRFPDGVPLLDPIDDMGIQDQGLKKV 846

Query: 307  VKQIEELERKLYAHPLHKSHEVDQIKCF-QRKAEVNHEIQILKTKMRDSQLQKFRDELKN 366
            ++++E  E ++Y+HPLH    ++ +    +RKA++  +I+  K +++ ++     DELK 
Sbjct: 847  IQKVEAFEHRMYSHPLHNDPNLETVYTLCERKAQIALDIKSAKRELKKARTVLQMDELKC 906

Query: 367  RSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQIASLASCFI 426
            R RVL++LG   +  V+++KGR AC I + DELL+TE+MFNG FNDL   Q  +L SCF+
Sbjct: 907  RKRVLRRLGFATSSDVIEMKGRVACEISSADELLLTEMMFNGLFNDLSSEQATALLSCFV 966

Query: 427  PGDKSNEQIQLRTELARPLQQLQDSARRIAEIQHECKLEINVEEYVESTVRPYLMDVIYC 486
              + S+E  +L  +LA PL+Q+Q+ A+RIA++  E KLEI+ E Y+ S+ +P+LMDV+Y 
Sbjct: 967  FQENSSEMPKLTEQLAGPLRQMQECAKRIAKVSAEAKLEIDEETYL-SSFKPHLMDVVYT 1026

Query: 487  WSKGASFSEVIQMTDVFEGSIIRSARRLDEFLNQLRAAANAVGEVTLESKFSAASDSLRR 546
            W+ GA+F+ + +MTDVFEGSIIR  RRL+E L Q+  AA A+G   LE+KF+     ++R
Sbjct: 1027 WATGATFAHICKMTDVFEGSIIRCMRRLEELLRQMCQAAKAIGNTELENKFAEGITKIKR 1040

Query: 547  GIMFANSLYL 553
             I+FA SLYL
Sbjct: 1087 DIVFAASLYL 1040

[Close]

BLAST of CmoCh05G007690.1 vs. ExPASy Swiss-Prot
Match: Q9XIF2 (DExH-box ATP-dependent RNA helicase DExH9 OS=Arabidopsis thaliana OX=3702 GN=MTR4 PE=2 SV=1)

HSP 1 Score: 307.8 bits (787), Expect = 2.5e-82
Identity = 210/554 (37.91%), Postives = 304/554 (54.87%), Query Frame = 0


Query: 1   VEMGTIKDMILGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIRHSFHQFQHEKVVAL 60
           +E    K M+ G    L S F LSY  +LN +   EG    E+++R+SF QFQ ++  A+
Sbjct: 477 MEPAVAKSMLKGSADSLNSAFHLSYNMLLNQLRCEEGD--PENLLRNSFFQFQADR--AI 536

Query: 61  PDIGKRVSKLEEEAATLDASGEASFAEVAEYHNLKLDIAQLEKKMMSEITRPERVLYFLL 120
           PD+ K++  LEEE  +L    E S   +  Y+NL L    L+K +   +  P+  L FLL
Sbjct: 537 PDLEKQIKSLEEERDSLVIEEEES---LKNYYNLILQYKSLKKDIREIVFTPKYCLPFLL 596

Query: 121 PGRLVCTRGVGNSFIRGVDKPSCLNLMSASQSKSMLDCYPYLATWLRLVKVREGGTDWGW 180
           P R VC                C N     QS S+                 E    WG 
Sbjct: 597 PNRAVCL--------------DCTNDDEEPQSFSI-----------------EDQDTWGV 656

Query: 181 GVVVNVVKKPSAGLGILPSRGGAYIVDTLLQCSPCLSENSSRPKPCPPRP-GEKGEMHVV 240
            +  N VK  S            Y VD L +C   +S++    K     P  E+GE  VV
Sbjct: 657 IMKFNKVKSLSEDDDSRRPEDANYTVDVLTRC--MVSKDGVGKKKVKAVPIKERGEPVVV 716

Query: 241 PVQLPLISALSKLRISIPSDLRPVEARESILLALEELGTRFPQGFPKLNPVKDMSIEDPE 300
            V L  I +LS   ++IP DL P+EARE+ L  + EL +R P G P L+P  DM I+   
Sbjct: 717 TVPLSQIKSLSSAIMNIPKDLVPLEARENALKKVSELLSRHPDGIP-LDPEVDMKIKSSS 776

Query: 301 IVELVKQIEELERKLYAHPLHKSHEV-DQIKCFQRKAEVNHEIQILKTKMRDSQLQKFRD 360
             + V+++E LE     H + KS  + +++K  Q K E+  +I+ LK  +R S    F+D
Sbjct: 777 YKKTVRRLEALENLFEKHKIAKSPLITEKLKVLQMKEELIAKIKSLKKTVRSSTALAFKD 836

Query: 361 ELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQIASLA 420
           ELK R RVL++LG+I +D VV+LKG+ AC I + +EL +TELMF+G F D    ++ SL 
Sbjct: 837 ELKARKRVLRRLGYITSDNVVELKGKVACEISSAEELTLTELMFSGIFKDAKVEELVSLL 896

Query: 421 SCFIPGDKSNEQIQLRTELARPLQQLQDSARRIAEIQHECKLEINVEEYVESTVRPYLMD 480
           SCF+  ++  +  + R EL     QLQD+ARR+AE+Q +CK+EI+VE +V+S  RP +M+
Sbjct: 897 SCFVWRERLPDAAKPREELDLLFIQLQDTARRVAEVQLDCKVEIDVESFVQS-FRPDIME 956

Query: 481 VIYCWSKGASFSEVIQMTDVFEGSIIRSARRLDEFLNQLRAAANAVGEVTLESKFSAASD 540
            +Y W+KG+ F EV+++  VFEGS+IR+ RR++E L QL  AA ++GE  LE+K   A  
Sbjct: 957 AVYAWAKGSKFYEVMEIARVFEGSLIRAIRRMEEVLQQLIVAAKSIGETQLEAKLEEAVS 988

Query: 541 SLRRGIMFANSLYL 553
            ++R I+FA SLYL
Sbjct: 1017 KIKRDIVFAASLYL 988

[Close]

BLAST of CmoCh05G007690.1 vs. ExPASy Swiss-Prot
Match: O14232 (ATP-dependent RNA helicase mtr4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=mtr4 PE=1 SV=1)

HSP 1 Score: 300.4 bits (768), Expect = 4.1e-80
Identity = 197/555 (35.50%), Postives = 302/555 (54.41%), Query Frame = 0


Query: 7    KDMILGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIRHSFHQFQHEKVVALPDIGKR 66
            K M+ G+   L S F LSY  ILNL+ R EG  + E ++   F QFQ+       ++ K 
Sbjct: 617  KSMLKGEADRLDSAFHLSYNMILNLL-RVEG-ISPEFMLERCFFQFQNSL-----EVPKL 676

Query: 67   VSKLEEEAATLDASGEASFAEVAEYHNLKLDIAQLEKKMMSEITRPERVLYFLLPGRLVC 126
             +KLEE     D+        + EYH LK  + +    + + +  P   L FL  G    
Sbjct: 677  EAKLEESQQHYDSFTILDERPLEEYHTLKTQLERYRTDVRTVVNHPNFCLSFLQGG---- 736

Query: 127  TRGVGNSFIRGVDKPSCLNLMSASQSKSMLDCYPYLATWLRLVKVREGGTDWGWGVVVNV 186
                                                    RLV+V+ G  D+ WGVVVNV
Sbjct: 737  ----------------------------------------RLVRVKVGNEDFDWGVVVNV 796

Query: 187  VKKP---SAGLGILPSRGGAYIVDTLLQCS----PCLSENSSRPKPCPPRPGEKGEMHVV 246
             K+P         LP    +YIV TL+  +    P    +   P+  PP   +KG+  VV
Sbjct: 797  SKRPLPKGQSNEYLPQE--SYIVHTLVMVASDTGPLRIRSGHLPEVHPPAAEDKGKFEVV 856

Query: 247  PVQLPLISALSKLRISIPSDLRPVEARESILLALEELGTRFPQGFPKLNPVKDMSIEDPE 306
            P  L  +  ++ +R+ +P+DL+    + ++  AL E+  RFP+G   L+PV++M+I++P 
Sbjct: 857  PFLLSSLDGIAHIRVFLPNDLKSQGQKLTVGKALSEVKRRFPEGITLLDPVENMNIKEPT 916

Query: 307  IVELVKQIEELERKLYAHPLHKSHEVDQIKC-FQRKAEVNHEIQILKTKMRDSQLQKFRD 366
             ++L+K++  LE +L ++PLH   E+++    + RK  +  E++ LK K+  ++     D
Sbjct: 917  FIKLMKKVNILESRLLSNPLHNFSELEEKYAEYLRKLALLEEVKDLKKKLSKARSIMQLD 976

Query: 367  ELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQIASLA 426
            EL +R RVL++LG   +D V+++KGR AC I +GD LL+TEL+FNG FNDL   Q A+L 
Sbjct: 977  ELNSRKRVLRRLGFTTSDDVIEVKGRVACEISSGDGLLLTELIFNGMFNDLTPEQCAALL 1036

Query: 427  SCFIPGDKSN-EQIQLRTELARPLQQLQDSARRIAEIQHECKLEINVEEYVESTVRPYLM 486
            SC +  +KS  E  +++ ELA PL+ LQ+ ARRIA++  E K E+N EEYV S  +P LM
Sbjct: 1037 SCLVFQEKSEVENQRMKEELAGPLKILQEMARRIAKVSKESKQELNEEEYVNS-FKPSLM 1096

Query: 487  DVIYCWSKGASFSEVIQMTDVFEGSIIRSARRLDEFLNQLRAAANAVGEVTLESKFSAAS 546
            +V+Y W+ GASF+++ +MTDV+EGS+IR  RRL+E + Q+  AA  +G  +L+ K     
Sbjct: 1097 EVVYAWAHGASFAQICKMTDVYEGSLIRMFRRLEELIRQMVDAAKVIGNTSLQQKMEDTI 1117

Query: 547  DSLRRGIMFANSLYL 553
              + R I+F+ SLYL
Sbjct: 1157 ACIHRDIVFSASLYL 1117

[Close]

BLAST of CmoCh05G007690.1 vs. ExPASy TrEMBL
Match: A0A6J1EP26 (DExH-box ATP-dependent RNA helicase DExH10 OS=Cucurbita moschata OX=3662 GN=LOC111436255 PE=4 SV=1)

HSP 1 Score: 951.0 bits (2457), Expect = 2.1e-273
Identity = 503/552 (91.12%), Postives = 503/552 (91.12%), Query Frame = 0


Query: 1    VEMGTIKDMILGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIRHSFHQFQHEKVVAL 60
            VEMGTIKDMILGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIRHSFHQFQHEK  AL
Sbjct: 512  VEMGTIKDMILGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIRHSFHQFQHEK--AL 571

Query: 61   PDIGKRVSKLEEEAATLDASGEASFAEVAEYHNLKLDIAQLEKKMMSEITRPERVLYFLL 120
            PDIGKRVSKLEEEAATLDASGE   AEVAEYHNLKLDIAQLEKKMMSEITRPERVLYFLL
Sbjct: 572  PDIGKRVSKLEEEAATLDASGE---AEVAEYHNLKLDIAQLEKKMMSEITRPERVLYFLL 631

Query: 121  PGRLVCTRGVGNSFIRGVDKPSCLNLMSASQSKSMLDCYPYLATWLRLVKVREGGTDWGW 180
            PG                                            RLVKVREGGTDWGW
Sbjct: 632  PG--------------------------------------------RLVKVREGGTDWGW 691

Query: 181  GVVVNVVKKPSAGLGILPSRGGAYIVDTLLQCSPCLSENSSRPKPCPPRPGEKGEMHVVP 240
            GVVVNVVKKPSAGLGILPSRGGAYIVDTLLQCSPCLSENSSRPKPCPPRPGEKGEMHVVP
Sbjct: 692  GVVVNVVKKPSAGLGILPSRGGAYIVDTLLQCSPCLSENSSRPKPCPPRPGEKGEMHVVP 751

Query: 241  VQLPLISALSKLRISIPSDLRPVEARESILLALEELGTRFPQGFPKLNPVKDMSIEDPEI 300
            VQLPLISALSKLRISIPSDLRPVEARESILLALEELGTRFPQGFPKLNPVKDMSIEDPEI
Sbjct: 752  VQLPLISALSKLRISIPSDLRPVEARESILLALEELGTRFPQGFPKLNPVKDMSIEDPEI 811

Query: 301  VELVKQIEELERKLYAHPLHKSHEVDQIKCFQRKAEVNHEIQILKTKMRDSQLQKFRDEL 360
            VELVKQIEELERKLYAHPLHKSHEVDQIKCFQRKAEVNHEIQILKTKMRDSQLQKFRDEL
Sbjct: 812  VELVKQIEELERKLYAHPLHKSHEVDQIKCFQRKAEVNHEIQILKTKMRDSQLQKFRDEL 871

Query: 361  KNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQIASLASC 420
            KNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQIASLASC
Sbjct: 872  KNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQIASLASC 931

Query: 421  FIPGDKSNEQIQLRTELARPLQQLQDSARRIAEIQHECKLEINVEEYVESTVRPYLMDVI 480
            FIPGDKSNEQIQLRTELARPLQQLQDSARRIAEIQHECKLEINVEEYVESTVRPYLMDVI
Sbjct: 932  FIPGDKSNEQIQLRTELARPLQQLQDSARRIAEIQHECKLEINVEEYVESTVRPYLMDVI 991

Query: 481  YCWSKGASFSEVIQMTDVFEGSIIRSARRLDEFLNQLRAAANAVGEVTLESKFSAASDSL 540
            YCWSKGASFSEVIQMTDVFEGSIIRSARRLDEFLNQLRAAANAVGEVTLESKFSAASDSL
Sbjct: 992  YCWSKGASFSEVIQMTDVFEGSIIRSARRLDEFLNQLRAAANAVGEVTLESKFSAASDSL 1014

Query: 541  RRGIMFANSLYL 553
            RRGIMFANSLYL
Sbjct: 1052 RRGIMFANSLYL 1014

[Close]

BLAST of CmoCh05G007690.1 vs. ExPASy TrEMBL
Match: A0A6J1K235 (DExH-box ATP-dependent RNA helicase DExH10 OS=Cucurbita maxima OX=3661 GN=LOC111491727 PE=4 SV=1)

HSP 1 Score: 948.7 bits (2451), Expect = 1.1e-272
Identity = 502/552 (90.94%), Postives = 502/552 (90.94%), Query Frame = 0


Query: 1    VEMGTIKDMILGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIRHSFHQFQHEKVVAL 60
            VEMGTIKDMILGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIRHSFHQFQHEK  AL
Sbjct: 512  VEMGTIKDMILGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIRHSFHQFQHEK--AL 571

Query: 61   PDIGKRVSKLEEEAATLDASGEASFAEVAEYHNLKLDIAQLEKKMMSEITRPERVLYFLL 120
            PDIGKRVSKLEEEAATLDASGE   AEVAEYH LKLDIAQLEKKMMSEITRPERVLYFLL
Sbjct: 572  PDIGKRVSKLEEEAATLDASGE---AEVAEYHKLKLDIAQLEKKMMSEITRPERVLYFLL 631

Query: 121  PGRLVCTRGVGNSFIRGVDKPSCLNLMSASQSKSMLDCYPYLATWLRLVKVREGGTDWGW 180
            PG                                            RLVKVREGGTDWGW
Sbjct: 632  PG--------------------------------------------RLVKVREGGTDWGW 691

Query: 181  GVVVNVVKKPSAGLGILPSRGGAYIVDTLLQCSPCLSENSSRPKPCPPRPGEKGEMHVVP 240
            GVVVNVVKKPSAGLGILPSRGGAYIVDTLLQCSPCLSENSSRPKPCPPRPGEKGEMHVVP
Sbjct: 692  GVVVNVVKKPSAGLGILPSRGGAYIVDTLLQCSPCLSENSSRPKPCPPRPGEKGEMHVVP 751

Query: 241  VQLPLISALSKLRISIPSDLRPVEARESILLALEELGTRFPQGFPKLNPVKDMSIEDPEI 300
            VQLPLISALSKLRISIPSDLRPVEARESILLALEELGTRFPQGFPKLNPVKDMSIEDPEI
Sbjct: 752  VQLPLISALSKLRISIPSDLRPVEARESILLALEELGTRFPQGFPKLNPVKDMSIEDPEI 811

Query: 301  VELVKQIEELERKLYAHPLHKSHEVDQIKCFQRKAEVNHEIQILKTKMRDSQLQKFRDEL 360
            VELVKQIEELERKLYAHPLHKSHEVDQIKCFQRKAEVNHEIQILKTKMRDSQLQKFRDEL
Sbjct: 812  VELVKQIEELERKLYAHPLHKSHEVDQIKCFQRKAEVNHEIQILKTKMRDSQLQKFRDEL 871

Query: 361  KNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQIASLASC 420
            KNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQIASLASC
Sbjct: 872  KNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQIASLASC 931

Query: 421  FIPGDKSNEQIQLRTELARPLQQLQDSARRIAEIQHECKLEINVEEYVESTVRPYLMDVI 480
            FIPGDKSNEQIQLRTELARPLQQLQDSARRIAEIQHECKLEINVEEYVESTVRPYLMDVI
Sbjct: 932  FIPGDKSNEQIQLRTELARPLQQLQDSARRIAEIQHECKLEINVEEYVESTVRPYLMDVI 991

Query: 481  YCWSKGASFSEVIQMTDVFEGSIIRSARRLDEFLNQLRAAANAVGEVTLESKFSAASDSL 540
            YCWSKGASFSEVIQMTDVFEGSIIRSARRLDEFLNQLRAAANAVGEVTLESKFSAASDSL
Sbjct: 992  YCWSKGASFSEVIQMTDVFEGSIIRSARRLDEFLNQLRAAANAVGEVTLESKFSAASDSL 1014

Query: 541  RRGIMFANSLYL 553
            RRGIMFANSLYL
Sbjct: 1052 RRGIMFANSLYL 1014

[Close]

BLAST of CmoCh05G007690.1 vs. ExPASy TrEMBL
Match: A0A1S3BQY6 (DExH-box ATP-dependent RNA helicase DExH10 OS=Cucumis melo OX=3656 GN=LOC103492231 PE=4 SV=1)

HSP 1 Score: 934.5 bits (2414), Expect = 2.1e-268
Identity = 492/552 (89.13%), Postives = 500/552 (90.58%), Query Frame = 0


Query: 1    VEMGTIKDMILGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIRHSFHQFQHEKVVAL 60
            +EMGTIK+MILGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIRHSFHQFQHEK  AL
Sbjct: 512  MEMGTIKEMILGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIRHSFHQFQHEK--AL 571

Query: 61   PDIGKRVSKLEEEAATLDASGEASFAEVAEYHNLKLDIAQLEKKMMSEITRPERVLYFLL 120
            PDIGKRVSKLEEEAATL+ASGE   AEVAEYH LKLDIAQLEKKMMSEITRPERVLYFLL
Sbjct: 572  PDIGKRVSKLEEEAATLEASGE---AEVAEYHKLKLDIAQLEKKMMSEITRPERVLYFLL 631

Query: 121  PGRLVCTRGVGNSFIRGVDKPSCLNLMSASQSKSMLDCYPYLATWLRLVKVREGGTDWGW 180
            PG                                            RLVKVREGGTDWGW
Sbjct: 632  PG--------------------------------------------RLVKVREGGTDWGW 691

Query: 181  GVVVNVVKKPSAGLGILPSRGGAYIVDTLLQCSPCLSENSSRPKPCPPRPGEKGEMHVVP 240
            GVVVNVVKKPSAGLGILPSRGGAYIVDTLLQCSPCLSENSSRPKPCPPRPGEKGEMHVVP
Sbjct: 692  GVVVNVVKKPSAGLGILPSRGGAYIVDTLLQCSPCLSENSSRPKPCPPRPGEKGEMHVVP 751

Query: 241  VQLPLISALSKLRISIPSDLRPVEARESILLALEELGTRFPQGFPKLNPVKDMSIEDPEI 300
            VQLPLISALSKLRISIPSDLRPVEARESILLALEELGTRFPQGFPKLNPVKDM+IEDPEI
Sbjct: 752  VQLPLISALSKLRISIPSDLRPVEARESILLALEELGTRFPQGFPKLNPVKDMNIEDPEI 811

Query: 301  VELVKQIEELERKLYAHPLHKSHEVDQIKCFQRKAEVNHEIQILKTKMRDSQLQKFRDEL 360
            VELVKQIEELERKLYAHPLHKS EVDQ+KCFQRKAEVNHEIQILKTKMRDSQLQKFRDEL
Sbjct: 812  VELVKQIEELERKLYAHPLHKSREVDQMKCFQRKAEVNHEIQILKTKMRDSQLQKFRDEL 871

Query: 361  KNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQIASLASC 420
            KNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQIA+LASC
Sbjct: 872  KNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQIAALASC 931

Query: 421  FIPGDKSNEQIQLRTELARPLQQLQDSARRIAEIQHECKLEINVEEYVESTVRPYLMDVI 480
            FIPGDKSNEQIQLRTELARPLQQLQDSARRIAEIQHECKL+INVEEYVESTVRPYLMDVI
Sbjct: 932  FIPGDKSNEQIQLRTELARPLQQLQDSARRIAEIQHECKLDINVEEYVESTVRPYLMDVI 991

Query: 481  YCWSKGASFSEVIQMTDVFEGSIIRSARRLDEFLNQLRAAANAVGEVTLESKFSAASDSL 540
            YCWSKGASFSEVIQMTD+FEGSIIRSARRLDEFLNQLRAAANAVGEV LESKFSAASDSL
Sbjct: 992  YCWSKGASFSEVIQMTDIFEGSIIRSARRLDEFLNQLRAAANAVGEVNLESKFSAASDSL 1014

Query: 541  RRGIMFANSLYL 553
            RRGIMFANSLYL
Sbjct: 1052 RRGIMFANSLYL 1014

[Close]

BLAST of CmoCh05G007690.1 vs. ExPASy TrEMBL
Match: A0A6J1D703 (DExH-box ATP-dependent RNA helicase DExH10 OS=Momordica charantia OX=3673 GN=LOC111018196 PE=4 SV=1)

HSP 1 Score: 917.9 bits (2371), Expect = 2.0e-263
Identity = 482/552 (87.32%), Postives = 496/552 (89.86%), Query Frame = 0


Query: 1    VEMGTIKDMILGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIRHSFHQFQHEKVVAL 60
            +EMGTIKDM+LGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIR+SFHQFQ+EK  AL
Sbjct: 514  MEMGTIKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIRNSFHQFQYEK--AL 573

Query: 61   PDIGKRVSKLEEEAATLDASGEASFAEVAEYHNLKLDIAQLEKKMMSEITRPERVLYFLL 120
            PDIGKRVSKLEEEAATLDASGE   AEVAEYH LKLDIAQLEKKMMSEITRPERVLYFLL
Sbjct: 574  PDIGKRVSKLEEEAATLDASGE---AEVAEYHKLKLDIAQLEKKMMSEITRPERVLYFLL 633

Query: 121  PGRLVCTRGVGNSFIRGVDKPSCLNLMSASQSKSMLDCYPYLATWLRLVKVREGGTDWGW 180
            PG                                            RLVKVREGGTDWGW
Sbjct: 634  PG--------------------------------------------RLVKVREGGTDWGW 693

Query: 181  GVVVNVVKKPSAGLGILPSRGGAYIVDTLLQCSPCLSENSSRPKPCPPRPGEKGEMHVVP 240
            GVVVNVVKKPSAG GILPSRGGAYIVDTLLQCSPCLSEN+SRPKPCPPRPGEKGEMHVVP
Sbjct: 694  GVVVNVVKKPSAGSGILPSRGGAYIVDTLLQCSPCLSENNSRPKPCPPRPGEKGEMHVVP 753

Query: 241  VQLPLISALSKLRISIPSDLRPVEARESILLALEELGTRFPQGFPKLNPVKDMSIEDPEI 300
            VQLPLISALSKLRISIPSDLRPVEARESILLALEELGTRFPQGFPKLNPVKDMSIED EI
Sbjct: 754  VQLPLISALSKLRISIPSDLRPVEARESILLALEELGTRFPQGFPKLNPVKDMSIEDAEI 813

Query: 301  VELVKQIEELERKLYAHPLHKSHEVDQIKCFQRKAEVNHEIQILKTKMRDSQLQKFRDEL 360
            V+LVKQIEELERKLYAHPLHKSHEVDQIKCFQRKAEVNHEIQ+LK KMRDSQLQKFRDEL
Sbjct: 814  VDLVKQIEELERKLYAHPLHKSHEVDQIKCFQRKAEVNHEIQLLKAKMRDSQLQKFRDEL 873

Query: 361  KNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQIASLASC 420
            KNRSRVLKKLGHIDAD VVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQIA+L+SC
Sbjct: 874  KNRSRVLKKLGHIDADSVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQIAALSSC 933

Query: 421  FIPGDKSNEQIQLRTELARPLQQLQDSARRIAEIQHECKLEINVEEYVESTVRPYLMDVI 480
            FIPGDKS+EQIQLRTELARPLQQLQDSARRIAEIQHECKL+INVEEYVESTVRPYLMDVI
Sbjct: 934  FIPGDKSSEQIQLRTELARPLQQLQDSARRIAEIQHECKLDINVEEYVESTVRPYLMDVI 993

Query: 481  YCWSKGASFSEVIQMTDVFEGSIIRSARRLDEFLNQLRAAANAVGEVTLESKFSAASDSL 540
            YCWSKGA+FSEVIQMTD+FEGSIIRSARRLDEFLNQLRAAANAVGE TLESKF AAS+SL
Sbjct: 994  YCWSKGANFSEVIQMTDIFEGSIIRSARRLDEFLNQLRAAANAVGEATLESKFGAASESL 1016

Query: 541  RRGIMFANSLYL 553
            RRGIMFANSLYL
Sbjct: 1054 RRGIMFANSLYL 1016

[Close]

BLAST of CmoCh05G007690.1 vs. ExPASy TrEMBL
Match: A0A6P5TDD0 (DExH-box ATP-dependent RNA helicase DExH10 OS=Prunus avium OX=42229 GN=LOC110766187 PE=4 SV=1)

HSP 1 Score: 859.0 bits (2218), Expect = 1.1e-245
Identity = 446/552 (80.80%), Postives = 479/552 (86.78%), Query Frame = 0


Query: 1   VEMGTIKDMILGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIRHSFHQFQHEKVVAL 60
           +EM T+KDM+LGKPAPLVSTFRLSYYSILNL+SRAEGQFTAEHVI++SFHQFQHEK  AL
Sbjct: 486 MEMNTLKDMVLGKPAPLVSTFRLSYYSILNLLSRAEGQFTAEHVIKNSFHQFQHEK--AL 545

Query: 61  PDIGKRVSKLEEEAATLDASGEASFAEVAEYHNLKLDIAQLEKKMMSEITRPERVLYFLL 120
           PDIGK+VS LE+E A LDASGE   AEVAEYH +KLDIAQLEKKMM+EITRPERVLYFLL
Sbjct: 546 PDIGKKVSNLEQEVAILDASGE---AEVAEYHKIKLDIAQLEKKMMTEITRPERVLYFLL 605

Query: 121 PGRLVCTRGVGNSFIRGVDKPSCLNLMSASQSKSMLDCYPYLATWLRLVKVREGGTDWGW 180
           PG                                            RLVK+REGGTDWGW
Sbjct: 606 PG--------------------------------------------RLVKIREGGTDWGW 665

Query: 181 GVVVNVVKKPSAGLGILPSRGGAYIVDTLLQCSPCLSENSSRPKPCPPRPGEKGEMHVVP 240
           GVVVNVVKKPS+ LG LPSRGG YIVDTLL CSP  SENSS+PKPCPPRPGEKGEMHVVP
Sbjct: 666 GVVVNVVKKPSSALGSLPSRGGGYIVDTLLHCSPGSSENSSQPKPCPPRPGEKGEMHVVP 725

Query: 241 VQLPLISALSKLRISIPSDLRPVEARESILLALEELGTRFPQGFPKLNPVKDMSIEDPEI 300
           VQLPLISALSKLRISIPSDLRP+EAR+SILLA++ELGTRFPQG PKLNPVKDM IEDPEI
Sbjct: 726 VQLPLISALSKLRISIPSDLRPLEARQSILLAVQELGTRFPQGLPKLNPVKDMGIEDPEI 785

Query: 301 VELVKQIEELERKLYAHPLHKSHEVDQIKCFQRKAEVNHEIQILKTKMRDSQLQKFRDEL 360
           VELV QIE LE+KLYAHPLHKS +V QIKCFQRKAEV+HEIQ LK+KMR+SQLQKFRDEL
Sbjct: 786 VELVTQIEALEQKLYAHPLHKSQDVQQIKCFQRKAEVDHEIQQLKSKMRESQLQKFRDEL 845

Query: 361 KNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQIASLASC 420
           KNRSRVLKKLGHID +GVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQIA+LASC
Sbjct: 846 KNRSRVLKKLGHIDTEGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQIAALASC 905

Query: 421 FIPGDKSNEQIQLRTELARPLQQLQDSARRIAEIQHECKLEINVEEYVESTVRPYLMDVI 480
           FIPGDKSNEQIQLRTELARPLQQLQ+SARRIAEIQHECKLE+NV+EYVESTVRPYLMDVI
Sbjct: 906 FIPGDKSNEQIQLRTELARPLQQLQESARRIAEIQHECKLEVNVDEYVESTVRPYLMDVI 965

Query: 481 YCWSKGASFSEVIQMTDVFEGSIIRSARRLDEFLNQLRAAANAVGEVTLESKFSAASDSL 540
           YCWSKGASF++V QMTD+FEGSIIRSARRLDEFLNQLR AA+AVGEV LE KF+ AS+SL
Sbjct: 966 YCWSKGASFADVTQMTDIFEGSIIRSARRLDEFLNQLRTAAHAVGEVALEEKFAGASESL 988

Query: 541 RRGIMFANSLYL 553
           RRGIMFANSLYL
Sbjct: 1026 RRGIMFANSLYL 988

[Close]

BLAST of CmoCh05G007690.1 vs. NCBI nr
Match: XP_022929766.1 (DExH-box ATP-dependent RNA helicase DExH10 [Cucurbita moschata])

HSP 1 Score: 951.0 bits (2457), Expect = 4.4e-273
Identity = 503/552 (91.12%), Postives = 503/552 (91.12%), Query Frame = 0


Query: 1    VEMGTIKDMILGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIRHSFHQFQHEKVVAL 60
            VEMGTIKDMILGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIRHSFHQFQHEK  AL
Sbjct: 512  VEMGTIKDMILGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIRHSFHQFQHEK--AL 571

Query: 61   PDIGKRVSKLEEEAATLDASGEASFAEVAEYHNLKLDIAQLEKKMMSEITRPERVLYFLL 120
            PDIGKRVSKLEEEAATLDASGE   AEVAEYHNLKLDIAQLEKKMMSEITRPERVLYFLL
Sbjct: 572  PDIGKRVSKLEEEAATLDASGE---AEVAEYHNLKLDIAQLEKKMMSEITRPERVLYFLL 631

Query: 121  PGRLVCTRGVGNSFIRGVDKPSCLNLMSASQSKSMLDCYPYLATWLRLVKVREGGTDWGW 180
            PG                                            RLVKVREGGTDWGW
Sbjct: 632  PG--------------------------------------------RLVKVREGGTDWGW 691

Query: 181  GVVVNVVKKPSAGLGILPSRGGAYIVDTLLQCSPCLSENSSRPKPCPPRPGEKGEMHVVP 240
            GVVVNVVKKPSAGLGILPSRGGAYIVDTLLQCSPCLSENSSRPKPCPPRPGEKGEMHVVP
Sbjct: 692  GVVVNVVKKPSAGLGILPSRGGAYIVDTLLQCSPCLSENSSRPKPCPPRPGEKGEMHVVP 751

Query: 241  VQLPLISALSKLRISIPSDLRPVEARESILLALEELGTRFPQGFPKLNPVKDMSIEDPEI 300
            VQLPLISALSKLRISIPSDLRPVEARESILLALEELGTRFPQGFPKLNPVKDMSIEDPEI
Sbjct: 752  VQLPLISALSKLRISIPSDLRPVEARESILLALEELGTRFPQGFPKLNPVKDMSIEDPEI 811

Query: 301  VELVKQIEELERKLYAHPLHKSHEVDQIKCFQRKAEVNHEIQILKTKMRDSQLQKFRDEL 360
            VELVKQIEELERKLYAHPLHKSHEVDQIKCFQRKAEVNHEIQILKTKMRDSQLQKFRDEL
Sbjct: 812  VELVKQIEELERKLYAHPLHKSHEVDQIKCFQRKAEVNHEIQILKTKMRDSQLQKFRDEL 871

Query: 361  KNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQIASLASC 420
            KNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQIASLASC
Sbjct: 872  KNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQIASLASC 931

Query: 421  FIPGDKSNEQIQLRTELARPLQQLQDSARRIAEIQHECKLEINVEEYVESTVRPYLMDVI 480
            FIPGDKSNEQIQLRTELARPLQQLQDSARRIAEIQHECKLEINVEEYVESTVRPYLMDVI
Sbjct: 932  FIPGDKSNEQIQLRTELARPLQQLQDSARRIAEIQHECKLEINVEEYVESTVRPYLMDVI 991

Query: 481  YCWSKGASFSEVIQMTDVFEGSIIRSARRLDEFLNQLRAAANAVGEVTLESKFSAASDSL 540
            YCWSKGASFSEVIQMTDVFEGSIIRSARRLDEFLNQLRAAANAVGEVTLESKFSAASDSL
Sbjct: 992  YCWSKGASFSEVIQMTDVFEGSIIRSARRLDEFLNQLRAAANAVGEVTLESKFSAASDSL 1014

Query: 541  RRGIMFANSLYL 553
            RRGIMFANSLYL
Sbjct: 1052 RRGIMFANSLYL 1014

[Close]

BLAST of CmoCh05G007690.1 vs. NCBI nr
Match: XP_022996497.1 (DExH-box ATP-dependent RNA helicase DExH10 [Cucurbita maxima])

HSP 1 Score: 948.7 bits (2451), Expect = 2.2e-272
Identity = 502/552 (90.94%), Postives = 502/552 (90.94%), Query Frame = 0


Query: 1    VEMGTIKDMILGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIRHSFHQFQHEKVVAL 60
            VEMGTIKDMILGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIRHSFHQFQHEK  AL
Sbjct: 512  VEMGTIKDMILGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIRHSFHQFQHEK--AL 571

Query: 61   PDIGKRVSKLEEEAATLDASGEASFAEVAEYHNLKLDIAQLEKKMMSEITRPERVLYFLL 120
            PDIGKRVSKLEEEAATLDASGE   AEVAEYH LKLDIAQLEKKMMSEITRPERVLYFLL
Sbjct: 572  PDIGKRVSKLEEEAATLDASGE---AEVAEYHKLKLDIAQLEKKMMSEITRPERVLYFLL 631

Query: 121  PGRLVCTRGVGNSFIRGVDKPSCLNLMSASQSKSMLDCYPYLATWLRLVKVREGGTDWGW 180
            PG                                            RLVKVREGGTDWGW
Sbjct: 632  PG--------------------------------------------RLVKVREGGTDWGW 691

Query: 181  GVVVNVVKKPSAGLGILPSRGGAYIVDTLLQCSPCLSENSSRPKPCPPRPGEKGEMHVVP 240
            GVVVNVVKKPSAGLGILPSRGGAYIVDTLLQCSPCLSENSSRPKPCPPRPGEKGEMHVVP
Sbjct: 692  GVVVNVVKKPSAGLGILPSRGGAYIVDTLLQCSPCLSENSSRPKPCPPRPGEKGEMHVVP 751

Query: 241  VQLPLISALSKLRISIPSDLRPVEARESILLALEELGTRFPQGFPKLNPVKDMSIEDPEI 300
            VQLPLISALSKLRISIPSDLRPVEARESILLALEELGTRFPQGFPKLNPVKDMSIEDPEI
Sbjct: 752  VQLPLISALSKLRISIPSDLRPVEARESILLALEELGTRFPQGFPKLNPVKDMSIEDPEI 811

Query: 301  VELVKQIEELERKLYAHPLHKSHEVDQIKCFQRKAEVNHEIQILKTKMRDSQLQKFRDEL 360
            VELVKQIEELERKLYAHPLHKSHEVDQIKCFQRKAEVNHEIQILKTKMRDSQLQKFRDEL
Sbjct: 812  VELVKQIEELERKLYAHPLHKSHEVDQIKCFQRKAEVNHEIQILKTKMRDSQLQKFRDEL 871

Query: 361  KNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQIASLASC 420
            KNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQIASLASC
Sbjct: 872  KNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQIASLASC 931

Query: 421  FIPGDKSNEQIQLRTELARPLQQLQDSARRIAEIQHECKLEINVEEYVESTVRPYLMDVI 480
            FIPGDKSNEQIQLRTELARPLQQLQDSARRIAEIQHECKLEINVEEYVESTVRPYLMDVI
Sbjct: 932  FIPGDKSNEQIQLRTELARPLQQLQDSARRIAEIQHECKLEINVEEYVESTVRPYLMDVI 991

Query: 481  YCWSKGASFSEVIQMTDVFEGSIIRSARRLDEFLNQLRAAANAVGEVTLESKFSAASDSL 540
            YCWSKGASFSEVIQMTDVFEGSIIRSARRLDEFLNQLRAAANAVGEVTLESKFSAASDSL
Sbjct: 992  YCWSKGASFSEVIQMTDVFEGSIIRSARRLDEFLNQLRAAANAVGEVTLESKFSAASDSL 1014

Query: 541  RRGIMFANSLYL 553
            RRGIMFANSLYL
Sbjct: 1052 RRGIMFANSLYL 1014

[Close]

BLAST of CmoCh05G007690.1 vs. NCBI nr
Match: XP_023546254.1 (DExH-box ATP-dependent RNA helicase DExH10 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 947.6 bits (2448), Expect = 4.8e-272
Identity = 501/552 (90.76%), Postives = 502/552 (90.94%), Query Frame = 0


Query: 1    VEMGTIKDMILGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIRHSFHQFQHEKVVAL 60
            VEMGTIKDMILGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIRHSFHQFQHEK  AL
Sbjct: 512  VEMGTIKDMILGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIRHSFHQFQHEK--AL 571

Query: 61   PDIGKRVSKLEEEAATLDASGEASFAEVAEYHNLKLDIAQLEKKMMSEITRPERVLYFLL 120
            PDIGKRVSKLEEEAATLDASGE   AEVAEYH LKLDIAQLEKKMMSEITRPERVLYFLL
Sbjct: 572  PDIGKRVSKLEEEAATLDASGE---AEVAEYHKLKLDIAQLEKKMMSEITRPERVLYFLL 631

Query: 121  PGRLVCTRGVGNSFIRGVDKPSCLNLMSASQSKSMLDCYPYLATWLRLVKVREGGTDWGW 180
            PG                                            RLVKVREGGTDWGW
Sbjct: 632  PG--------------------------------------------RLVKVREGGTDWGW 691

Query: 181  GVVVNVVKKPSAGLGILPSRGGAYIVDTLLQCSPCLSENSSRPKPCPPRPGEKGEMHVVP 240
            GVVVNVVKKPSAGLGILPSRGGAYIVDTLLQCSPCLSENSSRPKPCPPRPGEKGEMHVVP
Sbjct: 692  GVVVNVVKKPSAGLGILPSRGGAYIVDTLLQCSPCLSENSSRPKPCPPRPGEKGEMHVVP 751

Query: 241  VQLPLISALSKLRISIPSDLRPVEARESILLALEELGTRFPQGFPKLNPVKDMSIEDPEI 300
            VQLPLISALSKLRISIPSDLRPVEARESILLALEELGTRFPQGFPKLNPVKDMSIEDPEI
Sbjct: 752  VQLPLISALSKLRISIPSDLRPVEARESILLALEELGTRFPQGFPKLNPVKDMSIEDPEI 811

Query: 301  VELVKQIEELERKLYAHPLHKSHEVDQIKCFQRKAEVNHEIQILKTKMRDSQLQKFRDEL 360
            VELVKQIEELERKLY+HPLHKSHEVDQIKCFQRKAEVNHEIQILKTKMRDSQLQKFRDEL
Sbjct: 812  VELVKQIEELERKLYSHPLHKSHEVDQIKCFQRKAEVNHEIQILKTKMRDSQLQKFRDEL 871

Query: 361  KNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQIASLASC 420
            KNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQIASLASC
Sbjct: 872  KNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQIASLASC 931

Query: 421  FIPGDKSNEQIQLRTELARPLQQLQDSARRIAEIQHECKLEINVEEYVESTVRPYLMDVI 480
            FIPGDKSNEQIQLRTELARPLQQLQDSARRIAEIQHECKLEINVEEYVESTVRPYLMDVI
Sbjct: 932  FIPGDKSNEQIQLRTELARPLQQLQDSARRIAEIQHECKLEINVEEYVESTVRPYLMDVI 991

Query: 481  YCWSKGASFSEVIQMTDVFEGSIIRSARRLDEFLNQLRAAANAVGEVTLESKFSAASDSL 540
            YCWSKGASFSEVIQMTDVFEGSIIRSARRLDEFLNQLRAAANAVGEVTLESKFSAASDSL
Sbjct: 992  YCWSKGASFSEVIQMTDVFEGSIIRSARRLDEFLNQLRAAANAVGEVTLESKFSAASDSL 1014

Query: 541  RRGIMFANSLYL 553
            RRGIMFANSLYL
Sbjct: 1052 RRGIMFANSLYL 1014

[Close]

BLAST of CmoCh05G007690.1 vs. NCBI nr
Match: XP_038889177.1 (DExH-box ATP-dependent RNA helicase DExH10 isoform X1 [Benincasa hispida])

HSP 1 Score: 936.4 bits (2419), Expect = 1.1e-268
Identity = 493/552 (89.31%), Postives = 500/552 (90.58%), Query Frame = 0


Query: 1    VEMGTIKDMILGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIRHSFHQFQHEKVVAL 60
            +EMGTIKDMILGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIRHSFHQFQHEK  AL
Sbjct: 512  MEMGTIKDMILGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIRHSFHQFQHEK--AL 571

Query: 61   PDIGKRVSKLEEEAATLDASGEASFAEVAEYHNLKLDIAQLEKKMMSEITRPERVLYFLL 120
            PDIGKRVSKLEEEAATLDASGE   AEVAEYH LKLDIAQLEKKMMSEITRPERVLYFLL
Sbjct: 572  PDIGKRVSKLEEEAATLDASGE---AEVAEYHKLKLDIAQLEKKMMSEITRPERVLYFLL 631

Query: 121  PGRLVCTRGVGNSFIRGVDKPSCLNLMSASQSKSMLDCYPYLATWLRLVKVREGGTDWGW 180
            PG                                            RLVKVREGGTDWGW
Sbjct: 632  PG--------------------------------------------RLVKVREGGTDWGW 691

Query: 181  GVVVNVVKKPSAGLGILPSRGGAYIVDTLLQCSPCLSENSSRPKPCPPRPGEKGEMHVVP 240
            GVVVNVVKKPSAGLGILPSRGGAYIVDTLLQCSPCLSEN+SRPKPCPPRPGEKGEMHVVP
Sbjct: 692  GVVVNVVKKPSAGLGILPSRGGAYIVDTLLQCSPCLSENNSRPKPCPPRPGEKGEMHVVP 751

Query: 241  VQLPLISALSKLRISIPSDLRPVEARESILLALEELGTRFPQGFPKLNPVKDMSIEDPEI 300
            VQLPLISALSKLRISIPSDLRPVEARESILLALEELGTRFPQGFPKLNPVKDMSIEDPEI
Sbjct: 752  VQLPLISALSKLRISIPSDLRPVEARESILLALEELGTRFPQGFPKLNPVKDMSIEDPEI 811

Query: 301  VELVKQIEELERKLYAHPLHKSHEVDQIKCFQRKAEVNHEIQILKTKMRDSQLQKFRDEL 360
            VELV QIEELERKLYAHPLHKS EVDQ+KCFQRKAEVNHEIQILKTKMRDSQLQKFRDEL
Sbjct: 812  VELVNQIEELERKLYAHPLHKSREVDQMKCFQRKAEVNHEIQILKTKMRDSQLQKFRDEL 871

Query: 361  KNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQIASLASC 420
            KNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQIA+LASC
Sbjct: 872  KNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQIAALASC 931

Query: 421  FIPGDKSNEQIQLRTELARPLQQLQDSARRIAEIQHECKLEINVEEYVESTVRPYLMDVI 480
            FIPGDKSNEQIQLRTELARPLQQLQDSARRIAEIQHECKL+INVEEYVESTVRPYLMDVI
Sbjct: 932  FIPGDKSNEQIQLRTELARPLQQLQDSARRIAEIQHECKLDINVEEYVESTVRPYLMDVI 991

Query: 481  YCWSKGASFSEVIQMTDVFEGSIIRSARRLDEFLNQLRAAANAVGEVTLESKFSAASDSL 540
            YCWSKG+SFSEVIQMTD+FEGSIIRSARRLDEFLNQLRAAANAVGEVTLESKFSAASDSL
Sbjct: 992  YCWSKGSSFSEVIQMTDIFEGSIIRSARRLDEFLNQLRAAANAVGEVTLESKFSAASDSL 1014

Query: 541  RRGIMFANSLYL 553
            RRGIMFANSLYL
Sbjct: 1052 RRGIMFANSLYL 1014

[Close]

BLAST of CmoCh05G007690.1 vs. NCBI nr
Match: XP_008450745.1 (PREDICTED: DExH-box ATP-dependent RNA helicase DExH10 [Cucumis melo])

HSP 1 Score: 934.5 bits (2414), Expect = 4.2e-268
Identity = 492/552 (89.13%), Postives = 500/552 (90.58%), Query Frame = 0


Query: 1    VEMGTIKDMILGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIRHSFHQFQHEKVVAL 60
            +EMGTIK+MILGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIRHSFHQFQHEK  AL
Sbjct: 512  MEMGTIKEMILGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIRHSFHQFQHEK--AL 571

Query: 61   PDIGKRVSKLEEEAATLDASGEASFAEVAEYHNLKLDIAQLEKKMMSEITRPERVLYFLL 120
            PDIGKRVSKLEEEAATL+ASGE   AEVAEYH LKLDIAQLEKKMMSEITRPERVLYFLL
Sbjct: 572  PDIGKRVSKLEEEAATLEASGE---AEVAEYHKLKLDIAQLEKKMMSEITRPERVLYFLL 631

Query: 121  PGRLVCTRGVGNSFIRGVDKPSCLNLMSASQSKSMLDCYPYLATWLRLVKVREGGTDWGW 180
            PG                                            RLVKVREGGTDWGW
Sbjct: 632  PG--------------------------------------------RLVKVREGGTDWGW 691

Query: 181  GVVVNVVKKPSAGLGILPSRGGAYIVDTLLQCSPCLSENSSRPKPCPPRPGEKGEMHVVP 240
            GVVVNVVKKPSAGLGILPSRGGAYIVDTLLQCSPCLSENSSRPKPCPPRPGEKGEMHVVP
Sbjct: 692  GVVVNVVKKPSAGLGILPSRGGAYIVDTLLQCSPCLSENSSRPKPCPPRPGEKGEMHVVP 751

Query: 241  VQLPLISALSKLRISIPSDLRPVEARESILLALEELGTRFPQGFPKLNPVKDMSIEDPEI 300
            VQLPLISALSKLRISIPSDLRPVEARESILLALEELGTRFPQGFPKLNPVKDM+IEDPEI
Sbjct: 752  VQLPLISALSKLRISIPSDLRPVEARESILLALEELGTRFPQGFPKLNPVKDMNIEDPEI 811

Query: 301  VELVKQIEELERKLYAHPLHKSHEVDQIKCFQRKAEVNHEIQILKTKMRDSQLQKFRDEL 360
            VELVKQIEELERKLYAHPLHKS EVDQ+KCFQRKAEVNHEIQILKTKMRDSQLQKFRDEL
Sbjct: 812  VELVKQIEELERKLYAHPLHKSREVDQMKCFQRKAEVNHEIQILKTKMRDSQLQKFRDEL 871

Query: 361  KNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQIASLASC 420
            KNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQIA+LASC
Sbjct: 872  KNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQIAALASC 931

Query: 421  FIPGDKSNEQIQLRTELARPLQQLQDSARRIAEIQHECKLEINVEEYVESTVRPYLMDVI 480
            FIPGDKSNEQIQLRTELARPLQQLQDSARRIAEIQHECKL+INVEEYVESTVRPYLMDVI
Sbjct: 932  FIPGDKSNEQIQLRTELARPLQQLQDSARRIAEIQHECKLDINVEEYVESTVRPYLMDVI 991

Query: 481  YCWSKGASFSEVIQMTDVFEGSIIRSARRLDEFLNQLRAAANAVGEVTLESKFSAASDSL 540
            YCWSKGASFSEVIQMTD+FEGSIIRSARRLDEFLNQLRAAANAVGEV LESKFSAASDSL
Sbjct: 992  YCWSKGASFSEVIQMTDIFEGSIIRSARRLDEFLNQLRAAANAVGEVNLESKFSAASDSL 1014

Query: 541  RRGIMFANSLYL 553
            RRGIMFANSLYL
Sbjct: 1052 RRGIMFANSLYL 1014

[Close]

BLAST of CmoCh05G007690.1 vs. TAIR 10
Match: AT2G06990.1 (RNA helicase, ATP-dependent, SK12/DOB1 protein )

HSP 1 Score: 795.8 bits (2054), Expect = 2.2e-230
Identity = 417/552 (75.54%), Postives = 462/552 (83.70%), Query Frame = 0


Query: 1   VEMGTIKDMILGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIRHSFHQFQHEKVVAL 60
           +EM T++DM+LGKPAPL+STFRLSYY+ILNL+SRAEGQFTAEHVIRHSFHQFQHEK  AL
Sbjct: 493 MEMNTLRDMMLGKPAPLLSTFRLSYYTILNLLSRAEGQFTAEHVIRHSFHQFQHEK--AL 552

Query: 61  PDIGKRVSKLEEEAATLDASGEASFAEVAEYHNLKLDIAQLEKKMMSEITRPERVLYFLL 120
           PDIG +VSKLEEEAA L+ASGE   AEVAEYHNL+ DIA+ EKK+MSEI RPERVL FL 
Sbjct: 553 PDIGNKVSKLEEEAAILNASGE---AEVAEYHNLQFDIAKHEKKLMSEIIRPERVLCFLD 612

Query: 121 PGRLVCTRGVGNSFIRGVDKPSCLNLMSASQSKSMLDCYPYLATWLRLVKVREGGTDWGW 180
            G                                            RLVK+REGGTDWGW
Sbjct: 613 TG--------------------------------------------RLVKIREGGTDWGW 672

Query: 181 GVVVNVVKKPSAGLGILPSRGGAYIVDTLLQCSPCLSENSSRPKPCPPRPGEKGEMHVVP 240
           GVVVNVVK  S G G   S GG YIVDTLL CS   SEN ++PKPCPPR GEKGEMHVVP
Sbjct: 673 GVVVNVVKNSSVGTGSASSHGGGYIVDTLLHCSTGFSENGAKPKPCPPRAGEKGEMHVVP 732

Query: 241 VQLPLISALSKLRISIPSDLRPVEARESILLALEELGTRFPQGFPKLNPVKDMSIEDPEI 300
           VQLPLISALS+LRIS+PSDLRPVEAR+SILLAL+EL +RFP GFPKL+PVKDM+I+D EI
Sbjct: 733 VQLPLISALSRLRISVPSDLRPVEARQSILLALQELSSRFPLGFPKLHPVKDMNIQDTEI 792

Query: 301 VELVKQIEELERKLYAHPLHKSHEVDQIKCFQRKAEVNHEIQILKTKMRDSQLQKFRDEL 360
           V+LV QIEE+E+KL AHP+HKS +  QIK FQRKAEVN+EIQ LK+KMRDSQLQKFRDEL
Sbjct: 793 VDLVSQIEEVEQKLLAHPMHKSEDDQQIKSFQRKAEVNYEIQQLKSKMRDSQLQKFRDEL 852

Query: 361 KNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQIASLASC 420
           KNRSRVLKKLGHIDADGVVQ+KGRAACLIDTGDELLVTELMFNGTFNDLDHHQ+A+LASC
Sbjct: 853 KNRSRVLKKLGHIDADGVVQVKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASC 912

Query: 421 FIPGDKSNEQIQLRTELARPLQQLQDSARRIAEIQHECKLEINVEEYVESTVRPYLMDVI 480
           FIP DKSNEQ+ LR EL +PLQQLQDSAR+IAEIQHECKLEI+VEEYVEST+RP+LMDVI
Sbjct: 913 FIPVDKSNEQVNLRNELTKPLQQLQDSARKIAEIQHECKLEIDVEEYVESTIRPFLMDVI 972

Query: 481 YCWSKGASFSEVIQMTDVFEGSIIRSARRLDEFLNQLRAAANAVGEVTLESKFSAASDSL 540
           Y WSKGASF+E+IQMTD+FEGSIIRSARRLDEFLNQLRAAA AVGE +LESKF+AAS+SL
Sbjct: 973 YSWSKGASFAEIIQMTDIFEGSIIRSARRLDEFLNQLRAAAEAVGESSLESKFAAASESL 995

Query: 541 RRGIMFANSLYL 553
           RRGIMFANSLYL
Sbjct: 1033 RRGIMFANSLYL 995

[Close]

BLAST of CmoCh05G007690.1 vs. TAIR 10
Match: AT1G59760.1 (RNA helicase, ATP-dependent, SK12/DOB1 protein )

HSP 1 Score: 307.8 bits (787), Expect = 1.8e-83
Identity = 210/554 (37.91%), Postives = 304/554 (54.87%), Query Frame = 0


Query: 1   VEMGTIKDMILGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIRHSFHQFQHEKVVAL 60
           +E    K M+ G    L S F LSY  +LN +   EG    E+++R+SF QFQ ++  A+
Sbjct: 477 MEPAVAKSMLKGSADSLNSAFHLSYNMLLNQLRCEEGD--PENLLRNSFFQFQADR--AI 536

Query: 61  PDIGKRVSKLEEEAATLDASGEASFAEVAEYHNLKLDIAQLEKKMMSEITRPERVLYFLL 120
           PD+ K++  LEEE  +L    E S   +  Y+NL L    L+K +   +  P+  L FLL
Sbjct: 537 PDLEKQIKSLEEERDSLVIEEEES---LKNYYNLILQYKSLKKDIREIVFTPKYCLPFLL 596

Query: 121 PGRLVCTRGVGNSFIRGVDKPSCLNLMSASQSKSMLDCYPYLATWLRLVKVREGGTDWGW 180
           P R VC                C N     QS S+                 E    WG 
Sbjct: 597 PNRAVCL--------------DCTNDDEEPQSFSI-----------------EDQDTWGV 656

Query: 181 GVVVNVVKKPSAGLGILPSRGGAYIVDTLLQCSPCLSENSSRPKPCPPRP-GEKGEMHVV 240
            +  N VK  S            Y VD L +C   +S++    K     P  E+GE  VV
Sbjct: 657 IMKFNKVKSLSEDDDSRRPEDANYTVDVLTRC--MVSKDGVGKKKVKAVPIKERGEPVVV 716

Query: 241 PVQLPLISALSKLRISIPSDLRPVEARESILLALEELGTRFPQGFPKLNPVKDMSIEDPE 300
            V L  I +LS   ++IP DL P+EARE+ L  + EL +R P G P L+P  DM I+   
Sbjct: 717 TVPLSQIKSLSSAIMNIPKDLVPLEARENALKKVSELLSRHPDGIP-LDPEVDMKIKSSS 776

Query: 301 IVELVKQIEELERKLYAHPLHKSHEV-DQIKCFQRKAEVNHEIQILKTKMRDSQLQKFRD 360
             + V+++E LE     H + KS  + +++K  Q K E+  +I+ LK  +R S    F+D
Sbjct: 777 YKKTVRRLEALENLFEKHKIAKSPLITEKLKVLQMKEELIAKIKSLKKTVRSSTALAFKD 836

Query: 361 ELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQIASLA 420
           ELK R RVL++LG+I +D VV+LKG+ AC I + +EL +TELMF+G F D    ++ SL 
Sbjct: 837 ELKARKRVLRRLGYITSDNVVELKGKVACEISSAEELTLTELMFSGIFKDAKVEELVSLL 896

Query: 421 SCFIPGDKSNEQIQLRTELARPLQQLQDSARRIAEIQHECKLEINVEEYVESTVRPYLMD 480
           SCF+  ++  +  + R EL     QLQD+ARR+AE+Q +CK+EI+VE +V+S  RP +M+
Sbjct: 897 SCFVWRERLPDAAKPREELDLLFIQLQDTARRVAEVQLDCKVEIDVESFVQS-FRPDIME 956

Query: 481 VIYCWSKGASFSEVIQMTDVFEGSIIRSARRLDEFLNQLRAAANAVGEVTLESKFSAASD 540
            +Y W+KG+ F EV+++  VFEGS+IR+ RR++E L QL  AA ++GE  LE+K   A  
Sbjct: 957 AVYAWAKGSKFYEVMEIARVFEGSLIRAIRRMEEVLQQLIVAAKSIGETQLEAKLEEAVS 988

Query: 541 SLRRGIMFANSLYL 553
            ++R I+FA SLYL
Sbjct: 1017 KIKRDIVFAASLYL 988

[Close]

BLAST of CmoCh05G007690.1 vs. TAIR 10
Match: AT3G46960.1 (RNA helicase, ATP-dependent, SK12/DOB1 protein )

HSP 1 Score: 172.9 bits (437), Expect = 7.0e-43
Identity = 157/581 (27.02%), Postives = 277/581 (47.68%), Query Frame = 0


Query: 6    IKDMILGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIRHSFHQFQHEKVVALPDIGK 65
            ++ +I+G    L S FRL+Y  IL+L+ R E +   E +++ SF +F  +K   LP+  +
Sbjct: 812  LRRVIVGSATRLESQFRLTYIMILHLL-RVE-ELKVEDMLKRSFAEFHAQK--KLPE-KQ 871

Query: 66   RVSKLEEEAATLDASGEASFAEVAEYHNLKLDIAQLEKKMMSEITRPERVLYFLLPGRLV 125
            ++  ++    T           + +Y+++ ++  +   KM   + +      FL+ GR+V
Sbjct: 872  QLLMIKRSLPTKHIECIKGEPAIEDYYDMYMEANEYNNKMSEAVMQSPYAQSFLVQGRVV 931

Query: 126  CTRGVGNSFIRGVDKPSCLNLMSASQSKSMLDCYPYLATWLRLVKVREGGTDWGWGVVVN 185
              +        G+D    + L   S +      Y  L     +    +         +V+
Sbjct: 932  VMKSG-----MGIDNLLGIVLKGPSNTNRQ---YVVLVIKSEIPPPEKN--------MVS 991

Query: 186  VVKK---PSAGLGILPSRGGAYIVDTLLQCSPCLSENSSRPKPCPPRPGEKGEMHVVPVQ 245
            + KK   PS G  I P     +             E     KP       KG + V+ ++
Sbjct: 992  IGKKSSDPSQGYFIAPKSKRGF-------------EEEFYTKP----SSRKGPV-VIKIE 1051

Query: 246  LP--------------------LISALSKLRIS---IPSDLRPVEARESI--LLALEELG 305
            LP                    L    SK++I    +  D       +++  LL L+  G
Sbjct: 1052 LPYHGVAAGVGYEVKGFDNKEFLCICDSKIKIDQVRLLEDGNKAAFSQTVQQLLDLKSDG 1111

Query: 306  TRFPQGFPKLNPVKDMSIEDPEIVELVKQIEELERKLYAHPLHKSHEVDQIKCFQRKAEV 365
             +FP   P L+PVKD+ ++D E+VE   +   L +K+  +  H   ++++        ++
Sbjct: 1112 NKFP---PALDPVKDLKLKDAELVETYYKWTNLLQKMSMNKCHGCVKLEE------HMKL 1171

Query: 366  NHEIQILKTKMRDSQLQKFRDEL------KNRSRVLKKLGHIDADGVVQLKGRAACLIDT 425
              EI+  KT ++D + Q   + L      + R  VLK +G ID D VVQ+KGR AC +++
Sbjct: 1172 AREIKKHKTDLKDLEFQMSDEALLQMPAFQGRIDVLKNIGCIDDDLVVQIKGRVACEMNS 1231

Query: 426  GDELLVTELMFNGTFNDLDHHQIASLASCFIPGDKSNEQIQLRTELARPLQQLQDSARRI 485
            G+EL+ T  +F   F +L+  +  ++ S F+   K+     L  +LA+  Q+L D+A R+
Sbjct: 1232 GEELICTVCLFENQFEELEPEEAVAIMSAFVFQQKNTSAPTLTPKLAKAKQRLYDTAIRL 1291

Query: 486  AEIQHECKLEINVEEYVESTVRPYLMDVIYCWSKGASFSEVIQMTDVFEGSIIRSARRLD 545
             E+Q +  L+I+ EEY +  ++  L++V+Y W+KG  F+E+ ++TDV EG I+R+  RLD
Sbjct: 1292 GELQAQYNLQIDPEEYAQENLKFGLVEVVYEWAKGTPFAEICELTDVPEGLIVRTIVRLD 1344

Query: 546  EFLNQLRAAANAVGEVTLESKFSAASDSLRRGIMFANSLYL 553
            E   + + AA  +G   L  K  AAS++++R I+FA SLY+
Sbjct: 1352 ETCREFKNAAAIMGNSALHKKMDAASNAIKRDIVFAASLYV 1344

The following BLAST results are available for this feature:

BLAST of CmoCh05G007690.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZVW2	3.1e-229	75.54	DExH-box ATP-dependent RNA helicase DExH10 OS=Arabidopsis thaliana OX=3702 GN=HE...	[more]
P42285	2.1e-100	38.91	Exosome RNA helicase MTR4 OS=Homo sapiens OX=9606 GN=MTREX PE=1 SV=3	[more]
Q9CZU3	2.7e-100	38.91	Exosome RNA helicase MTR4 OS=Mus musculus OX=10090 GN=Mtrex PE=1 SV=1	[more]
Q9XIF2	2.5e-82	37.91	DExH-box ATP-dependent RNA helicase DExH9 OS=Arabidopsis thaliana OX=3702 GN=MTR...	[more]
O14232	4.1e-80	35.50	ATP-dependent RNA helicase mtr4 OS=Schizosaccharomyces pombe (strain 972 / ATCC ...	[more]

BLAST of CmoCh05G007690.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EP26	2.1e-273	91.12	DExH-box ATP-dependent RNA helicase DExH10 OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1K235	1.1e-272	90.94	DExH-box ATP-dependent RNA helicase DExH10 OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A1S3BQY6	2.1e-268	89.13	DExH-box ATP-dependent RNA helicase DExH10 OS=Cucumis melo OX=3656 GN=LOC1034922...	[more]
A0A6J1D703	2.0e-263	87.32	DExH-box ATP-dependent RNA helicase DExH10 OS=Momordica charantia OX=3673 GN=LOC...	[more]
A0A6P5TDD0	1.1e-245	80.80	DExH-box ATP-dependent RNA helicase DExH10 OS=Prunus avium OX=42229 GN=LOC110766...	[more]

BLAST of CmoCh05G007690.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022929766.1	4.4e-273	91.12	DExH-box ATP-dependent RNA helicase DExH10 [Cucurbita moschata]	[more]
XP_022996497.1	2.2e-272	90.94	DExH-box ATP-dependent RNA helicase DExH10 [Cucurbita maxima]	[more]
XP_023546254.1	4.8e-272	90.76	DExH-box ATP-dependent RNA helicase DExH10 [Cucurbita pepo subsp. pepo]	[more]
XP_038889177.1	1.1e-268	89.31	DExH-box ATP-dependent RNA helicase DExH10 isoform X1 [Benincasa hispida]	[more]
XP_008450745.1	4.2e-268	89.13	PREDICTED: DExH-box ATP-dependent RNA helicase DExH10 [Cucumis melo]	[more]

BLAST of CmoCh05G007690.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G06990.1	2.2e-230	75.54	RNA helicase, ATP-dependent, SK12/DOB1 protein	[more]
AT1G59760.1	1.8e-83	37.91	RNA helicase, ATP-dependent, SK12/DOB1 protein	[more]
AT3G46960.1	7.0e-43	27.02	RNA helicase, ATP-dependent, SK12/DOB1 protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012961	ATP-dependent RNA helicase Ski2, C-terminal	SMART	SM01142	DSHCT_2	coord: 374..552 e-value: 8.8E-86 score: 301.0
IPR012961	ATP-dependent RNA helicase Ski2, C-terminal	PFAM	PF08148	DSHCT	coord: 377..546 e-value: 4.2E-45 score: 153.3
None	No IPR available	GENE3D	2.40.30.300		coord: 167..283 e-value: 4.2E-30 score: 106.8
None	No IPR available	GENE3D	1.10.3380.30		coord: 331..552 e-value: 7.9E-71 score: 240.0
None	No IPR available	GENE3D	1.20.1500.20		coord: 49..125 e-value: 5.7E-10 score: 41.3
None	No IPR available	PANTHER	PTHR47961:SF2	DEAD/DEAH BOX HELICASE FAMILY PROTEIN, EXPRESSED	coord: 167..552 coord: 1..137
None	No IPR available	PANTHER	PTHR47961	DNA POLYMERASE THETA, PUTATIVE (AFU_ORTHOLOGUE AFUA_1G05260)-RELATED	coord: 167..552 coord: 1..137
IPR025696	rRNA-processing arch domain	PFAM	PF13234	rRNA_proc-arch	coord: 42..349 e-value: 1.8E-61 score: 208.4

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmoCh05G007690	CmoCh05G007690	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh05G007690.1:exon:8884	CmoCh05G007690.1:exon:8884	exon
CmoCh05G007690.1:exon:8885	CmoCh05G007690.1:exon:8885	exon
CmoCh05G007690.1:exon:8886	CmoCh05G007690.1:exon:8886	exon
CmoCh05G007690.1:exon:8887	CmoCh05G007690.1:exon:8887	exon
CmoCh05G007690.1:exon:8888	CmoCh05G007690.1:exon:8888	exon
CmoCh05G007690.1:exon:8889	CmoCh05G007690.1:exon:8889	exon
CmoCh05G007690.1:exon:8890	CmoCh05G007690.1:exon:8890	exon
CmoCh05G007690.1:exon:8891	CmoCh05G007690.1:exon:8891	exon
CmoCh05G007690.1:exon:8892	CmoCh05G007690.1:exon:8892	exon
CmoCh05G007690.1:exon:8893	CmoCh05G007690.1:exon:8893	exon
CmoCh05G007690.1:exon:8894	CmoCh05G007690.1:exon:8894	exon
CmoCh05G007690.1:exon:8895	CmoCh05G007690.1:exon:8895	exon
CmoCh05G007690.1:exon:8896	CmoCh05G007690.1:exon:8896	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh05G007690.1:cds	CmoCh05G007690.1:cds	CDS
CmoCh05G007690.1:cds	CmoCh05G007690.1:cds_2	CDS
CmoCh05G007690.1:cds	CmoCh05G007690.1:cds_3	CDS
CmoCh05G007690.1:cds	CmoCh05G007690.1:cds_4	CDS
CmoCh05G007690.1:cds	CmoCh05G007690.1:cds_5	CDS
CmoCh05G007690.1:cds	CmoCh05G007690.1:cds_6	CDS
CmoCh05G007690.1:cds	CmoCh05G007690.1:cds_7	CDS
CmoCh05G007690.1:cds	CmoCh05G007690.1:cds_8	CDS
CmoCh05G007690.1:cds	CmoCh05G007690.1:cds_9	CDS
CmoCh05G007690.1:cds	CmoCh05G007690.1:cds_10	CDS
CmoCh05G007690.1:cds	CmoCh05G007690.1:cds_11	CDS
CmoCh05G007690.1:cds	CmoCh05G007690.1:cds_12	CDS
CmoCh05G007690.1:cds	CmoCh05G007690.1:cds_13	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh05G007690.1:three_prime_utr	CmoCh05G007690.1:three_prime_utr	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmoCh05G007690.1	CmoCh05G007690.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000460	maturation of 5.8S rRNA
biological_process	GO:0006401	RNA catabolic process
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003724	RNA helicase activity