CmoCh05G002630.1 (mRNA) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh05G002630.1
Type	mRNA
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Proteasome subunit alpha type
Location	Cmo_Chr05: 1127478 .. 1130691 (-)
Sequence length	1354
RNA-Seq Expression	CmoCh05G002630.1
Synteny	CmoCh05G002630.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAACGAGTAAAGTCACCACAAGTGAGGAAACCCATCGCCAAATATTGCCTTGGAGAAGACGAAAACCCCTAAATCCTCCATTAATACGACCTCAATCCTCTCCCTTTGTGCACACCAGGGATCGTGATTGTGGCTCTGTGAAACTCTTGAATTGTTTTTATTTTTGTTTCAGCAACAATGTTTAGGAATCAGTACGATACGGACGTGACGACATGGAGTCCGGCGGGGAGGTTGTTTCAGGTGGAGTACGCGATGGAGGCCGTGAAGCAAGGCTCCGCTGCCATTGGCCTCCGATCCAAGACCCATGTGGTTCTTGCCTGCGTCAATAAGGCTAACTCTGAACTATCCTCGCACCAGAAGAAGATCTTCAAAGTCGACGATCACATCGGCGTCGCCATTTCCGGCCTTACTGCTGATGGACGCGTTCTTTCCCGTTATATGAGATCTGAGTGTATCAATTACAGTTACACTTACGAATCTCCGCTTCCCGTTGGTCGTCTCGTAGTTCAACTTGCCGATAAGGCTCAGGTTTGTAAACGAAGCCCTCGTTCTGTTCACAATTTGTTGGTGCTTGTAGTTTCTTAGGTATTTCTTGTATTTTAGCTATCTATGCTGTGGGTTTGAATTTATTTGGCCAGTGGCGGGCTTGGTTCTGAAATTACGCATTACCATAGCTGGATATTTAAAGGTGAAACATTTCAGATTATTAAGTTCTCTAAGCTGAGGGGATAGAATGTGAATCTTTTATTAGCCAGAAACTGAAGTTAATGAACATTTAGGAAATGGCAGAAGGTTGCCTATGTATCCTCTAATGATCAGCACTTTGAGTGCTTAATGGCAGCTAAAGATTATGGGCTTTCTGCTTGCTTATCTTATGCTGTTAGTATTCGTTCCACTGATTCTTAACCCTGCAGTAGTAGAAACAAACTAGGACTTCAAGCTCTCCAATTGTTGAATTAGTTTGAACCCACCTAGCCTTGCTGGTAATTTGTTCTTTCTAATTTTTTGTATTTTGTTGTTCAATAGTTTAGACTTTAGTAGAAGCCAGGAAGTTGAGTAATTATTTAGGGTCACAATGTATCTACCACTTTTTATGACCATTAGATGTATGAAAAATTAGATTCGTTTAACTATGTCGCTATCTGGTGGTCATGGGGGATGGCATAGCTCCCAATAATTTCTTCTGGAATGGTTTCCTAGGAACGTTTTGTTTCATGTTTCTCAATAAAAGTTCGGGTTCTTACCATAAAAAAGGAAAAAAGAAAAAAAGTGGAGTGATGAATTCCTGGAATTGGGTTTAATTTATTAGTATGTGACAGGGCACTGAGAGATAGCATGAGGACGTGCCATTCTCTGCTAAGTTCTTTAATTCCGTTTCAATGTGGTTGTTGTGTTGGTGTTGGTGTTGATTTAAATAGATCCTTTATAGGGTTAGATTCTGCTTTCAAGTTCTTTGATTTGCCTAATCATTTTGATATCTCAATTCCTTTTTACTGCCCTTCTCCTAGCTTTGCTTGAAATTTGGGGAATAAAATGTTGGTACTCGGAATGCGATACTCATATAGTAGTGTAGATGAAGAAACAATCTTGGTAACCTGGCTTATTGCATTTATCCCACTTTTTTTTTTGTTTTTTTTTTTTTGTTAGAGATCTTGTATTCACAACAAAAATAAAGACAAAAAAACCTGGAGTCCAGAGTTAGAGAAAATGGCATCCACCGCCAACTAGCTAATACATGAAGACCTTACAAACTAGGGTGATCTGAAATACTATGTGGTTATGCTATAGAACAAATTTTGTGGGAAGGGCACTTTAATGAGAGACTGTATGAAGAACAAAATCGATGTACTTATGTAAGCATTTCTAACCAAACGCGTCGTGAAAGATGATCTGGTTTCTTTCTAACCAAATGAGCCATAGATAAGCTCTAATGGCAAACTTCCAAACGTCTCTATCTTTTCATTTCAGCCACCAGCCTGAACGAGCTTTCAGGAGCTTATCTTCATGCATTTATCCCCTCTTTAACCTCTACTTTTTTTTTTCCGCTGTAAAATAGGTTTACGTCAACCGATATGGGTAAAAGGGGAGTGGACTGCTATTTTGTTGTACGTGTACCCTTTTGTTTCTCCATAAATCATGGTGAATTCCTTCCCACGAGAATATATTCAAGTGTGTAGGACGTAGCTTATGGCTTTGGACCAGATGTAGTTGTTAATTGTTATCAATCCTTTGCTGGTTCTTGCTGGTTCTTTATTGAGGGTGTATTCTCTCTGAACTGTTCTGTTATATGTATGTTCAGGGCTCCAAGCATGGTTATTTTTACAGGGAATACCAGTTCTCATGTCCAGAAACTTAGGTTTCTCTAATTATCTTGCACATTTGTTGCAGGTCTGCACCCAACGCTCATGGAAACGTCCATACGGTGTTGGTCTGCTGGTAGGTGGTCTGGATGAGTCTGGCGCTCATCTCTACTACAACTGCCCGAGCGGGAATTACTTTGAATATCAAGCTTTTGCCATAGGATCCCGTTCTCAGGCTGCAAAGACATACTTGGAAAGGAGGTTTGAGAACTTCAAGGACTCTTCTAGAGACGACTTAATCAAAGATGCACTGATGGCTACCAGAGAAACCTTGCAAGGAGAAAAACTAACTTCCTCCATATGCACGATTTCCATTTTGGGAGTTGGTGAACCTTTCCATATACTGGATAGGGAAACTGTTCAGAAGTTGATTGATGAATTTGAGATTGTTAAGGAGGATGATGTTCCTGCTGCGGATCAGGATGTCGCCCCGGAGCAGGGTGATTCTGCTGCCCCCGAACCAGCTGCTGCAGGGACAGACCAAGGTAGTGCCCCAGATCAAGGCGTGGCGCCAATGGATATCTAAGGGCACACACCGTGCAGACGTTGCCTCTCCCTTCCCCACTTCCTGGGTATTGCTGTTAGGTTTGGATCTTTAGTGCAGACATTTCGATACTTCTCTATTGTGGCCTCAGATTTCGATTTTACATTTATGAAAGTTGTATCAGACCGTTTAAAATGCGTTATCACAACTGATTATGTTTTTCTATTATATTATTGTGAGAAGAACATTAAGCTGATCCACAATGGTCCTTAGACACTTGGAATCAAGCTAGTTAATATTGAATTGTATGAAGGGGAGAATCTTCAGAAAGAAGATGAATGGATTCTTTCCATATGTGAAGAGGATATAT

mRNA sequence

AAACGAGTAAAGTCACCACAAGTGAGGAAACCCATCGCCAAATATTGCCTTGGAGAAGACGAAAACCCCTAAATCCTCCATTAATACGACCTCAATCCTCTCCCTTTGTGCACACCAGGGATCGTGATTGTGGCTCTGTGAAACTCTTGAATTGTTTTTATTTTTGTTTCAGCAACAATGTTTAGGAATCAGTACGATACGGACGTGACGACATGGAGTCCGGCGGGGAGGTTGTTTCAGGTGGAGTACGCGATGGAGGCCGTGAAGCAAGGCTCCGCTGCCATTGGCCTCCGATCCAAGACCCATGTGGTTCTTGCCTGCGTCAATAAGGCTAACTCTGAACTATCCTCGCACCAGAAGAAGATCTTCAAAGTCGACGATCACATCGGCGTCGCCATTTCCGGCCTTACTGCTGATGGACGCGTTCTTTCCCGTTATATGAGATCTGAGTGTATCAATTACAGTTACACTTACGAATCTCCGCTTCCCGTTGGTCGTCTCGTAGTTCAACTTGCCGATAAGGCTCAGGTCTGCACCCAACGCTCATGGAAACGTCCATACGGTGTTGGTCTGCTGGTAGGTGGTCTGGATGAGTCTGGCGCTCATCTCTACTACAACTGCCCGAGCGGGAATTACTTTGAATATCAAGCTTTTGCCATAGGATCCCGTTCTCAGGCTGCAAAGACATACTTGGAAAGGAGGTTTGAGAACTTCAAGGACTCTTCTAGAGACGACTTAATCAAAGATGCACTGATGGCTACCAGAGAAACCTTGCAAGGAGAAAAACTAACTTCCTCCATATGCACGATTTCCATTTTGGGAGTTGGTGAACCTTTCCATATACTGGATAGGGAAACTGTTCAGAAGTTGATTGATGAATTTGAGATTGTTAAGGAGGATGATGTTCCTGCTGCGGATCAGGATGTCGCCCCGGAGCAGGGTGATTCTGCTGCCCCCGAACCAGCTGCTGCAGGGACAGACCAAGGTAGTGCCCCAGATCAAGGCGTGGCGCCAATGGATATCTAAGGGCACACACCGTGCAGACGTTGCCTCTCCCTTCCCCACTTCCTGGGTATTGCTGTTAGGTTTGGATCTTTAGTGCAGACATTTCGATACTTCTCTATTGTGGCCTCAGATTTCGATTTTACATTTATGAAAGTTGTATCAGACCGTTTAAAATGCGTTATCACAACTGATTATGTTTTTCTATTATATTATTGTGAGAAGAACATTAAGCTGATCCACAATGGTCCTTAGACACTTGGAATCAAGCTAGTTAATATTGAATTGTATGAAGGGGAGAATCTTCAGAAAGAAGATGAATGGATTCTTTCCATATGTGAAGAGGATATAT

Coding sequence (CDS)

ATGTTTAGGAATCAGTACGATACGGACGTGACGACATGGAGTCCGGCGGGGAGGTTGTTTCAGGTGGAGTACGCGATGGAGGCCGTGAAGCAAGGCTCCGCTGCCATTGGCCTCCGATCCAAGACCCATGTGGTTCTTGCCTGCGTCAATAAGGCTAACTCTGAACTATCCTCGCACCAGAAGAAGATCTTCAAAGTCGACGATCACATCGGCGTCGCCATTTCCGGCCTTACTGCTGATGGACGCGTTCTTTCCCGTTATATGAGATCTGAGTGTATCAATTACAGTTACACTTACGAATCTCCGCTTCCCGTTGGTCGTCTCGTAGTTCAACTTGCCGATAAGGCTCAGGTCTGCACCCAACGCTCATGGAAACGTCCATACGGTGTTGGTCTGCTGGTAGGTGGTCTGGATGAGTCTGGCGCTCATCTCTACTACAACTGCCCGAGCGGGAATTACTTTGAATATCAAGCTTTTGCCATAGGATCCCGTTCTCAGGCTGCAAAGACATACTTGGAAAGGAGGTTTGAGAACTTCAAGGACTCTTCTAGAGACGACTTAATCAAAGATGCACTGATGGCTACCAGAGAAACCTTGCAAGGAGAAAAACTAACTTCCTCCATATGCACGATTTCCATTTTGGGAGTTGGTGAACCTTTCCATATACTGGATAGGGAAACTGTTCAGAAGTTGATTGATGAATTTGAGATTGTTAAGGAGGATGATGTTCCTGCTGCGGATCAGGATGTCGCCCCGGAGCAGGGTGATTCTGCTGCCCCCGAACCAGCTGCTGCAGGGACAGACCAAGGTAGTGCCCCAGATCAAGGCGTGGCGCCAATGGATATCTAA

Protein sequence

MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNKANSELSSHQKKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFKDSSRDDLIKDALMATRETLQGEKLTSSICTISILGVGEPFHILDRETVQKLIDEFEIVKEDDVPAADQDVAPEQGDSAAPEPAAAGTDQGSAPDQGVAPMDI

Homology

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BLAST of CmoCh05G002630.1 vs. ExPASy Swiss-Prot
Match: O23712 (Proteasome subunit alpha type-1-B OS=Arabidopsis thaliana OX=3702 GN=PAF2 PE=1 SV=2)

HSP 1 Score: 449.1 bits (1154), Expect = 3.6e-125
Identity = 225/283 (79.51%), Postives = 252/283 (89.05%), Query Frame = 0


Query: 1   MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNKANSELSSHQ 60
           MFRNQYDTDVTTWSP GRLFQVEYAMEAVKQGSAAIGLRS++HVVLACVNKA SELSSHQ
Sbjct: 1   MFRNQYDTDVTTWSPTGRLFQVEYAMEAVKQGSAAIGLRSRSHVVLACVNKAQSELSSHQ 60

Query: 61  KKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT 120
           +KIFKVDDHIGVAI+GLTADGRVLSRYMRSE IN+S+TYESPLPVGRLVV LADKAQVCT
Sbjct: 61  RKIFKVDDHIGVAIAGLTADGRVLSRYMRSESINHSFTYESPLPVGRLVVHLADKAQVCT 120

Query: 121 QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFK 180
           QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLER+FE+F+
Sbjct: 121 QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERKFESFQ 180

Query: 181 DSSRDDLIKDALMATRETLQGEKLTSSICTISILGVGEPFHILDRETVQKLIDEFEIVKE 240
           +SS++DLIKDA+MA RETLQGE L SS+CT+S+LGV EPFH LD+E++QK+ID FE V E
Sbjct: 181 ESSKEDLIKDAIMAIRETLQGETLKSSLCTVSVLGVDEPFHFLDQESIQKVIDTFEKVPE 240

Query: 241 DDVPAADQDVAPEQGDSAAPEPAAAGT-DQGSAPDQGVAPMDI 283
           ++  A + +  PE        P AAGT +QG + DQ VAPM+I
Sbjct: 241 EEEDAGEGEAEPEAA------PGAAGTGEQGGSGDQDVAPMEI 277

[Close]

BLAST of CmoCh05G002630.1 vs. ExPASy Swiss-Prot
Match: P34066 (Proteasome subunit alpha type-1-A OS=Arabidopsis thaliana OX=3702 GN=PAF1 PE=1 SV=3)

HSP 1 Score: 440.3 bits (1131), Expect = 1.7e-122
Identity = 223/282 (79.08%), Postives = 248/282 (87.94%), Query Frame = 0


Query: 1   MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNKANSELSSHQ 60
           MFRNQYDTDVTTWSP GRLFQVEYAMEAVKQGSAAIGLRS++HVVLACVNKA SELSSHQ
Sbjct: 1   MFRNQYDTDVTTWSPTGRLFQVEYAMEAVKQGSAAIGLRSRSHVVLACVNKAQSELSSHQ 60

Query: 61  KKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT 120
           +KIFKVDDHIGVAI+GLTADGRVLSRYMRSE IN+S+TYESPLPVGRLVV LADKAQVCT
Sbjct: 61  RKIFKVDDHIGVAIAGLTADGRVLSRYMRSESINHSFTYESPLPVGRLVVHLADKAQVCT 120

Query: 121 QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFK 180
           QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFE+F 
Sbjct: 121 QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFESFG 180

Query: 181 DSSRDDLIKDALMATRETLQGEKLTSSICTISILGVGEPFHILDRETVQKLIDEFEIVKE 240
           DSSR+DLIKDA++A RETLQGE L SS+CT++ILGV EPFH LD+E +QK+ID FE V E
Sbjct: 181 DSSREDLIKDAILAVRETLQGETLKSSLCTVAILGVDEPFHFLDQEAIQKVIDTFEKVPE 240

Query: 241 DDVPAADQDVAPEQGDSAAPEPAAAGTDQGSAPDQGVAPMDI 283
           ++    + +    +G++ A E A A    G A DQ VAPM++
Sbjct: 241 EE----EGEGEAGEGEAEAAEAAPAERGGGVAGDQDVAPMEM 278

[Close]

BLAST of CmoCh05G002630.1 vs. ExPASy Swiss-Prot
Match: P52428 (Proteasome subunit alpha type-1 OS=Oryza sativa subsp. japonica OX=39947 GN=PAF1 PE=2 SV=1)

HSP 1 Score: 379.0 bits (972), Expect = 4.6e-104
Identity = 193/287 (67.25%), Postives = 229/287 (79.79%), Query Frame = 0


Query: 1   MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNKANSELSSHQ 60
           MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSA +GLRS+TH VLA  NKA SELSSHQ
Sbjct: 1   MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSACVGLRSRTHAVLAAANKAASELSSHQ 60

Query: 61  KKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT 120
           +K+F+V DH GVA++GLTADGRVLSR++RSECIN+++ Y++PLPV RL ++LADKAQVCT
Sbjct: 61  RKVFRVADHAGVALAGLTADGRVLSRFLRSECINHAFVYDAPLPVSRLALRLADKAQVCT 120

Query: 121 QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFK 180
           QRSWKRPYGVGLLV GLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKT+LERRFE + 
Sbjct: 121 QRSWKRPYGVGLLVAGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTFLERRFEGYN 180

Query: 181 DSSRDDLIKDALMATRETLQGEKLTSSICTISIL-----GVGEPFHILDRETVQKLIDEF 240
           D + + LIKDAL A +ETLQGEKLTSS CT++I+     G  EPF ++D + +Q++ID  
Sbjct: 181 DYTPEQLIKDALSAIKETLQGEKLTSSNCTVAIVGRKDDGTVEPFEMIDVKRIQEIIDSM 240

Query: 241 EIVKEDDVPAADQDVAPEQGDSAAPEPAAAGTDQGSAPDQGVAPMDI 283
           E  +E   PAA       + +S++ +    GTD         APMDI
Sbjct: 241 EAAEE--APAA-------EAESSSMQEEDKGTD--------AAPMDI 270

[Close]

BLAST of CmoCh05G002630.1 vs. ExPASy Swiss-Prot
Match: Q27562 (Proteasome subunit alpha type-1 OS=Dictyostelium discoideum OX=44689 GN=psmA1 PE=3 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 3.2e-73
Identity = 132/238 (55.46%), Postives = 179/238 (75.21%), Query Frame = 0


Query: 1   MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNKANSELSSHQ 60
           M+RNQYD+D+TT+SP+GR+ Q+EYAMEAVKQG AA+ L+SK   VL  + +++SEL S+Q
Sbjct: 1   MYRNQYDSDITTFSPSGRIHQIEYAMEAVKQGGAAVALKSKQFAVLVSLKRSSSELGSYQ 60

Query: 61  KKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT 120
           KKIF VDDH+G+AISGLTAD R+L  YMR+EC NY+Y YES + V RLV ++ADK QV T
Sbjct: 61  KKIFVVDDHVGIAISGLTADARMLCNYMRNECSNYNYVYESQMRVERLVTKVADKHQVHT 120

Query: 121 QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFK 180
           QR  +RPYGVGLLV G D+ GAH+Y  CPSGN+++Y++ +IGSRSQ+AKTYLE+ FE+F+
Sbjct: 121 QRYGRRPYGVGLLVAGYDQLGAHIYQTCPSGNFYDYKSISIGSRSQSAKTYLEKHFESFE 180

Query: 181 DSSRDDLIKDALMATRETLQG--EKLTSSICTISILGVGEPFHILDRETVQKLIDEFE 237
           + + + LI   L A RET+    + L S   +I I+G G+PF I++    Q  ++  E
Sbjct: 181 ECTLEQLITHGLRALRETIPNTDDTLNSKNVSIGIVGEGQPFKIIEEADAQPYLNLLE 238

[Close]

BLAST of CmoCh05G002630.1 vs. ExPASy Swiss-Prot
Match: Q3T0X5 (Proteasome subunit alpha type-1 OS=Bos taurus OX=9913 GN=PSMA1 PE=1 SV=1)

HSP 1 Score: 261.9 bits (668), Expect = 8.2e-69
Identity = 124/237 (52.32%), Postives = 168/237 (70.89%), Query Frame = 0


Query: 1   MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNKANSELSSHQ 60
           MFRNQYD DVT WSP GR+ Q+EYAMEAVKQGSA +GL+SKTH VL  + +A SEL++HQ
Sbjct: 1   MFRNQYDNDVTVWSPQGRIHQIEYAMEAVKQGSATVGLKSKTHAVLVALKRAQSELAAHQ 60

Query: 61  KKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT 120
           KKI  VD+HIG++I+GLTAD R+L  +MR EC++  + ++ PLPV RLV  +  K Q+ T
Sbjct: 61  KKILHVDNHIGISIAGLTADARLLCNFMRQECLDSRFVFDRPLPVSRLVSLIGSKTQIPT 120

Query: 121 QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFK 180
           QR  +RPYGVGLL+ G D+ G H++  CPS NYF+ +A +IG+RSQ+A+TYLER    F 
Sbjct: 121 QRYGRRPYGVGLLIAGYDDMGPHIFQTCPSANYFDCRAMSIGARSQSARTYLERHMSEFM 180

Query: 181 DSSRDDLIKDALMATRETLQGEK-LTSSICTISILGVGEPFHILDRETVQKLIDEFE 237
           + + ++L+K  L A RETL  E+ LT+   +I I+G    F I D + V   ++  E
Sbjct: 181 ECNLNELVKHGLRALRETLPAEQDLTTKNVSIGIVGKDLEFTIYDDDDVSPFLEGLE 237

[Close]

BLAST of CmoCh05G002630.1 vs. ExPASy TrEMBL
Match: A0A6J1HD20 (Proteasome subunit alpha type OS=Cucurbita moschata OX=3662 GN=LOC111462503 PE=3 SV=1)

HSP 1 Score: 559.7 bits (1441), Expect = 7.0e-156
Identity = 282/282 (100.00%), Postives = 282/282 (100.00%), Query Frame = 0


Query: 1   MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNKANSELSSHQ 60
           MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNKANSELSSHQ
Sbjct: 1   MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNKANSELSSHQ 60

Query: 61  KKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT 120
           KKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT
Sbjct: 61  KKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT 120

Query: 121 QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFK 180
           QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFK
Sbjct: 121 QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFK 180

Query: 181 DSSRDDLIKDALMATRETLQGEKLTSSICTISILGVGEPFHILDRETVQKLIDEFEIVKE 240
           DSSRDDLIKDALMATRETLQGEKLTSSICTISILGVGEPFHILDRETVQKLIDEFEIVKE
Sbjct: 181 DSSRDDLIKDALMATRETLQGEKLTSSICTISILGVGEPFHILDRETVQKLIDEFEIVKE 240

Query: 241 DDVPAADQDVAPEQGDSAAPEPAAAGTDQGSAPDQGVAPMDI 283
           DDVPAADQDVAPEQGDSAAPEPAAAGTDQGSAPDQGVAPMDI
Sbjct: 241 DDVPAADQDVAPEQGDSAAPEPAAAGTDQGSAPDQGVAPMDI 282

[Close]

BLAST of CmoCh05G002630.1 vs. ExPASy TrEMBL
Match: A0A6J1KBQ0 (Proteasome subunit alpha type OS=Cucurbita maxima OX=3661 GN=LOC111491854 PE=3 SV=1)

HSP 1 Score: 548.9 bits (1413), Expect = 1.2e-152
Identity = 277/282 (98.23%), Postives = 280/282 (99.29%), Query Frame = 0


Query: 1   MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNKANSELSSHQ 60
           MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNKANSELSSHQ
Sbjct: 1   MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNKANSELSSHQ 60

Query: 61  KKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT 120
           KKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT
Sbjct: 61  KKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT 120

Query: 121 QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFK 180
           QRSWKRPYGVGLLVGGLDESGAHLY+NCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFK
Sbjct: 121 QRSWKRPYGVGLLVGGLDESGAHLYFNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFK 180

Query: 181 DSSRDDLIKDALMATRETLQGEKLTSSICTISILGVGEPFHILDRETVQKLIDEFEIVKE 240
           DSS+DDLIKDALMATRETLQGEKLTSS+CTISILGVGEPFHILDRETVQKLIDEFEIVKE
Sbjct: 181 DSSKDDLIKDALMATRETLQGEKLTSSVCTISILGVGEPFHILDRETVQKLIDEFEIVKE 240

Query: 241 DDVPAADQDVAPEQGDSAAPEPAAAGTDQGSAPDQGVAPMDI 283
           DDVPAADQDVAPE GDSAAPEP AAGTDQGSAPDQGVAPMDI
Sbjct: 241 DDVPAADQDVAPEHGDSAAPEP-AAGTDQGSAPDQGVAPMDI 281

[Close]

BLAST of CmoCh05G002630.1 vs. ExPASy TrEMBL
Match: A0A5A7VC66 (Proteasome subunit alpha type OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G005560 PE=3 SV=1)

HSP 1 Score: 547.4 bits (1409), Expect = 3.6e-152
Identity = 276/282 (97.87%), Postives = 280/282 (99.29%), Query Frame = 0


Query: 1   MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNKANSELSSHQ 60
           MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRS THVVLACVNKANSELSSHQ
Sbjct: 1   MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSNTHVVLACVNKANSELSSHQ 60

Query: 61  KKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT 120
           KKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT
Sbjct: 61  KKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT 120

Query: 121 QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFK 180
           QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFK
Sbjct: 121 QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFK 180

Query: 181 DSSRDDLIKDALMATRETLQGEKLTSSICTISILGVGEPFHILDRETVQKLIDEFEIVKE 240
           DSSRD+LIKDAL+ATRETLQGEKLTSSICTI+ILGVGEPFHILDRETVQKLIDEFEIVKE
Sbjct: 181 DSSRDELIKDALIATRETLQGEKLTSSICTIAILGVGEPFHILDRETVQKLIDEFEIVKE 240

Query: 241 DDVPAADQDVAPEQGDSAAPEPAAAGTDQGSAPDQGVAPMDI 283
           DDVPAADQD+APEQGDSAAPEP AAGTDQGSAPDQGVAPMDI
Sbjct: 241 DDVPAADQDIAPEQGDSAAPEP-AAGTDQGSAPDQGVAPMDI 281

[Close]

BLAST of CmoCh05G002630.1 vs. ExPASy TrEMBL
Match: A0A1S3BBW8 (Proteasome subunit alpha type OS=Cucumis melo OX=3656 GN=LOC103487987 PE=3 SV=1)

HSP 1 Score: 547.4 bits (1409), Expect = 3.6e-152
Identity = 276/282 (97.87%), Postives = 280/282 (99.29%), Query Frame = 0


Query: 1   MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNKANSELSSHQ 60
           MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRS THVVLACVNKANSELSSHQ
Sbjct: 1   MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSNTHVVLACVNKANSELSSHQ 60

Query: 61  KKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT 120
           KKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT
Sbjct: 61  KKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT 120

Query: 121 QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFK 180
           QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFK
Sbjct: 121 QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFK 180

Query: 181 DSSRDDLIKDALMATRETLQGEKLTSSICTISILGVGEPFHILDRETVQKLIDEFEIVKE 240
           DSSRD+LIKDAL+ATRETLQGEKLTSSICTI+ILGVGEPFHILDRETVQKLIDEFEIVKE
Sbjct: 181 DSSRDELIKDALIATRETLQGEKLTSSICTIAILGVGEPFHILDRETVQKLIDEFEIVKE 240

Query: 241 DDVPAADQDVAPEQGDSAAPEPAAAGTDQGSAPDQGVAPMDI 283
           DDVPAADQD+APEQGDSAAPEP AAGTDQGSAPDQGVAPMDI
Sbjct: 241 DDVPAADQDIAPEQGDSAAPEP-AAGTDQGSAPDQGVAPMDI 281

[Close]

BLAST of CmoCh05G002630.1 vs. ExPASy TrEMBL
Match: A0A0A0LLH5 (Proteasome subunit alpha type OS=Cucumis sativus OX=3659 GN=Csa_2G361820 PE=3 SV=1)

HSP 1 Score: 545.8 bits (1405), Expect = 1.0e-151
Identity = 275/282 (97.52%), Postives = 279/282 (98.94%), Query Frame = 0


Query: 1   MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNKANSELSSHQ 60
           MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRS THVVLACVNKANSELSSHQ
Sbjct: 1   MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSNTHVVLACVNKANSELSSHQ 60

Query: 61  KKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT 120
           KKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT
Sbjct: 61  KKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT 120

Query: 121 QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFK 180
           QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFK
Sbjct: 121 QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFK 180

Query: 181 DSSRDDLIKDALMATRETLQGEKLTSSICTISILGVGEPFHILDRETVQKLIDEFEIVKE 240
           DSSRD+LIKDAL+ATRETLQGEKLTSSICTI+ILGVGEPFHILDRETVQKLIDEFEIVKE
Sbjct: 181 DSSRDELIKDALIATRETLQGEKLTSSICTIAILGVGEPFHILDRETVQKLIDEFEIVKE 240

Query: 241 DDVPAADQDVAPEQGDSAAPEPAAAGTDQGSAPDQGVAPMDI 283
           DDVPA DQD+APEQGDSAAPEP AAGTDQGSAPDQGVAPMDI
Sbjct: 241 DDVPAVDQDIAPEQGDSAAPEP-AAGTDQGSAPDQGVAPMDI 281

[Close]

BLAST of CmoCh05G002630.1 vs. NCBI nr
Match: XP_022961863.1 (proteasome subunit alpha type-1-B-like [Cucurbita moschata])

HSP 1 Score: 559.7 bits (1441), Expect = 1.4e-155
Identity = 282/282 (100.00%), Postives = 282/282 (100.00%), Query Frame = 0


Query: 1   MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNKANSELSSHQ 60
           MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNKANSELSSHQ
Sbjct: 1   MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNKANSELSSHQ 60

Query: 61  KKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT 120
           KKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT
Sbjct: 61  KKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT 120

Query: 121 QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFK 180
           QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFK
Sbjct: 121 QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFK 180

Query: 181 DSSRDDLIKDALMATRETLQGEKLTSSICTISILGVGEPFHILDRETVQKLIDEFEIVKE 240
           DSSRDDLIKDALMATRETLQGEKLTSSICTISILGVGEPFHILDRETVQKLIDEFEIVKE
Sbjct: 181 DSSRDDLIKDALMATRETLQGEKLTSSICTISILGVGEPFHILDRETVQKLIDEFEIVKE 240

Query: 241 DDVPAADQDVAPEQGDSAAPEPAAAGTDQGSAPDQGVAPMDI 283
           DDVPAADQDVAPEQGDSAAPEPAAAGTDQGSAPDQGVAPMDI
Sbjct: 241 DDVPAADQDVAPEQGDSAAPEPAAAGTDQGSAPDQGVAPMDI 282

[Close]

BLAST of CmoCh05G002630.1 vs. NCBI nr
Match: KAG6598460.1 (Proteasome subunit alpha type-1-B, partial [Cucurbita argyrosperma subsp. sororia] >KAG7029398.1 Proteasome subunit alpha type-1-B, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 555.1 bits (1429), Expect = 3.6e-154
Identity = 280/282 (99.29%), Postives = 281/282 (99.65%), Query Frame = 0


Query: 1   MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNKANSELSSHQ 60
           MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNKANSELSSHQ
Sbjct: 1   MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNKANSELSSHQ 60

Query: 61  KKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT 120
           KKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT
Sbjct: 61  KKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT 120

Query: 121 QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFK 180
           QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFK
Sbjct: 121 QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFK 180

Query: 181 DSSRDDLIKDALMATRETLQGEKLTSSICTISILGVGEPFHILDRETVQKLIDEFEIVKE 240
           DSSRDDLIKDALMATRETLQGEKLTSSICTISILGVGEPFHILDRETVQKLIDEFEIVKE
Sbjct: 181 DSSRDDLIKDALMATRETLQGEKLTSSICTISILGVGEPFHILDRETVQKLIDEFEIVKE 240

Query: 241 DDVPAADQDVAPEQGDSAAPEPAAAGTDQGSAPDQGVAPMDI 283
           +DVPAADQDVAPEQGDSAAPE AAAGTDQGSAPDQGVAPMDI
Sbjct: 241 EDVPAADQDVAPEQGDSAAPESAAAGTDQGSAPDQGVAPMDI 282

[Close]

BLAST of CmoCh05G002630.1 vs. NCBI nr
Match: XP_023546840.1 (proteasome subunit alpha type-1-B-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 552.4 bits (1422), Expect = 2.3e-153
Identity = 280/282 (99.29%), Postives = 281/282 (99.65%), Query Frame = 0


Query: 1   MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNKANSELSSHQ 60
           MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNKANSELSSHQ
Sbjct: 1   MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNKANSELSSHQ 60

Query: 61  KKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT 120
           KKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT
Sbjct: 61  KKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT 120

Query: 121 QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFK 180
           QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFK
Sbjct: 121 QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFK 180

Query: 181 DSSRDDLIKDALMATRETLQGEKLTSSICTISILGVGEPFHILDRETVQKLIDEFEIVKE 240
           DSSRDDLIKDALMATRETLQGEKLTSSICTISILGVGEPFHILDRETVQ+LIDEFEIVKE
Sbjct: 181 DSSRDDLIKDALMATRETLQGEKLTSSICTISILGVGEPFHILDRETVQQLIDEFEIVKE 240

Query: 241 DDVPAADQDVAPEQGDSAAPEPAAAGTDQGSAPDQGVAPMDI 283
           DDVPAADQDVAPEQGDSAAPEP AAGTDQGSAPDQGVAPMDI
Sbjct: 241 DDVPAADQDVAPEQGDSAAPEP-AAGTDQGSAPDQGVAPMDI 281

[Close]

BLAST of CmoCh05G002630.1 vs. NCBI nr
Match: XP_022996683.1 (proteasome subunit alpha type-1-B-like [Cucurbita maxima])

HSP 1 Score: 548.9 bits (1413), Expect = 2.6e-152
Identity = 277/282 (98.23%), Postives = 280/282 (99.29%), Query Frame = 0


Query: 1   MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNKANSELSSHQ 60
           MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNKANSELSSHQ
Sbjct: 1   MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNKANSELSSHQ 60

Query: 61  KKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT 120
           KKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT
Sbjct: 61  KKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT 120

Query: 121 QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFK 180
           QRSWKRPYGVGLLVGGLDESGAHLY+NCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFK
Sbjct: 121 QRSWKRPYGVGLLVGGLDESGAHLYFNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFK 180

Query: 181 DSSRDDLIKDALMATRETLQGEKLTSSICTISILGVGEPFHILDRETVQKLIDEFEIVKE 240
           DSS+DDLIKDALMATRETLQGEKLTSS+CTISILGVGEPFHILDRETVQKLIDEFEIVKE
Sbjct: 181 DSSKDDLIKDALMATRETLQGEKLTSSVCTISILGVGEPFHILDRETVQKLIDEFEIVKE 240

Query: 241 DDVPAADQDVAPEQGDSAAPEPAAAGTDQGSAPDQGVAPMDI 283
           DDVPAADQDVAPE GDSAAPEP AAGTDQGSAPDQGVAPMDI
Sbjct: 241 DDVPAADQDVAPEHGDSAAPEP-AAGTDQGSAPDQGVAPMDI 281

[Close]

BLAST of CmoCh05G002630.1 vs. NCBI nr
Match: XP_008444739.1 (PREDICTED: proteasome subunit alpha type-1-B-like [Cucumis melo] >KAA0065218.1 proteasome subunit alpha type-1-B-like [Cucumis melo var. makuwa])

HSP 1 Score: 547.4 bits (1409), Expect = 7.4e-152
Identity = 276/282 (97.87%), Postives = 280/282 (99.29%), Query Frame = 0


Query: 1   MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNKANSELSSHQ 60
           MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRS THVVLACVNKANSELSSHQ
Sbjct: 1   MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSNTHVVLACVNKANSELSSHQ 60

Query: 61  KKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT 120
           KKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT
Sbjct: 61  KKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT 120

Query: 121 QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFK 180
           QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFK
Sbjct: 121 QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFK 180

Query: 181 DSSRDDLIKDALMATRETLQGEKLTSSICTISILGVGEPFHILDRETVQKLIDEFEIVKE 240
           DSSRD+LIKDAL+ATRETLQGEKLTSSICTI+ILGVGEPFHILDRETVQKLIDEFEIVKE
Sbjct: 181 DSSRDELIKDALIATRETLQGEKLTSSICTIAILGVGEPFHILDRETVQKLIDEFEIVKE 240

Query: 241 DDVPAADQDVAPEQGDSAAPEPAAAGTDQGSAPDQGVAPMDI 283
           DDVPAADQD+APEQGDSAAPEP AAGTDQGSAPDQGVAPMDI
Sbjct: 241 DDVPAADQDIAPEQGDSAAPEP-AAGTDQGSAPDQGVAPMDI 281

[Close]

BLAST of CmoCh05G002630.1 vs. TAIR 10
Match: AT1G47250.1 (20S proteasome alpha subunit F2 )

HSP 1 Score: 449.1 bits (1154), Expect = 2.6e-126
Identity = 225/283 (79.51%), Postives = 252/283 (89.05%), Query Frame = 0


Query: 1   MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNKANSELSSHQ 60
           MFRNQYDTDVTTWSP GRLFQVEYAMEAVKQGSAAIGLRS++HVVLACVNKA SELSSHQ
Sbjct: 1   MFRNQYDTDVTTWSPTGRLFQVEYAMEAVKQGSAAIGLRSRSHVVLACVNKAQSELSSHQ 60

Query: 61  KKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT 120
           +KIFKVDDHIGVAI+GLTADGRVLSRYMRSE IN+S+TYESPLPVGRLVV LADKAQVCT
Sbjct: 61  RKIFKVDDHIGVAIAGLTADGRVLSRYMRSESINHSFTYESPLPVGRLVVHLADKAQVCT 120

Query: 121 QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFK 180
           QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLER+FE+F+
Sbjct: 121 QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERKFESFQ 180

Query: 181 DSSRDDLIKDALMATRETLQGEKLTSSICTISILGVGEPFHILDRETVQKLIDEFEIVKE 240
           +SS++DLIKDA+MA RETLQGE L SS+CT+S+LGV EPFH LD+E++QK+ID FE V E
Sbjct: 181 ESSKEDLIKDAIMAIRETLQGETLKSSLCTVSVLGVDEPFHFLDQESIQKVIDTFEKVPE 240

Query: 241 DDVPAADQDVAPEQGDSAAPEPAAAGT-DQGSAPDQGVAPMDI 283
           ++  A + +  PE        P AAGT +QG + DQ VAPM+I
Sbjct: 241 EEEDAGEGEAEPEAA------PGAAGTGEQGGSGDQDVAPMEI 277

[Close]

BLAST of CmoCh05G002630.1 vs. TAIR 10
Match: AT5G42790.1 (proteasome alpha subunit F1 )

HSP 1 Score: 440.3 bits (1131), Expect = 1.2e-123
Identity = 223/282 (79.08%), Postives = 248/282 (87.94%), Query Frame = 0


Query: 1   MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNKANSELSSHQ 60
           MFRNQYDTDVTTWSP GRLFQVEYAMEAVKQGSAAIGLRS++HVVLACVNKA SELSSHQ
Sbjct: 1   MFRNQYDTDVTTWSPTGRLFQVEYAMEAVKQGSAAIGLRSRSHVVLACVNKAQSELSSHQ 60

Query: 61  KKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT 120
           +KIFKVDDHIGVAI+GLTADGRVLSRYMRSE IN+S+TYESPLPVGRLVV LADKAQVCT
Sbjct: 61  RKIFKVDDHIGVAIAGLTADGRVLSRYMRSESINHSFTYESPLPVGRLVVHLADKAQVCT 120

Query: 121 QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFK 180
           QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFE+F 
Sbjct: 121 QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFESFG 180

Query: 181 DSSRDDLIKDALMATRETLQGEKLTSSICTISILGVGEPFHILDRETVQKLIDEFEIVKE 240
           DSSR+DLIKDA++A RETLQGE L SS+CT++ILGV EPFH LD+E +QK+ID FE V E
Sbjct: 181 DSSREDLIKDAILAVRETLQGETLKSSLCTVAILGVDEPFHFLDQEAIQKVIDTFEKVPE 240

Query: 241 DDVPAADQDVAPEQGDSAAPEPAAAGTDQGSAPDQGVAPMDI 283
           ++    + +    +G++ A E A A    G A DQ VAPM++
Sbjct: 241 EE----EGEGEAGEGEAEAAEAAPAERGGGVAGDQDVAPMEM 278

[Close]

BLAST of CmoCh05G002630.1 vs. TAIR 10
Match: AT1G53850.1 (20S proteasome alpha subunit E1 )

HSP 1 Score: 156.0 bits (393), Expect = 4.5e-38
Identity = 94/235 (40.00%), Postives = 136/235 (57.87%), Query Frame = 0


Query: 3   RNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNKANSEL--SSHQ 62
           R +YD  V T+SP GRLFQVEYA+EA+K GS AIG+++K  VVLA   +  S L   S  
Sbjct: 5   RTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGVKTKEGVVLAVEKRITSPLLEPSSV 64

Query: 63  KKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKA---Q 122
           +KI ++DDHIG A+SGL AD R L  + R E  N+ ++Y  P+ V      L D A    
Sbjct: 65  EKIMEIDDHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFG 124

Query: 123 VCTQRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFE 182
              + S  RP+GV LL+ G DE+G  LYY  PSG +++  A AIGS S+ A + L+ +F 
Sbjct: 125 EGEEESMSRPFGVSLLIAGHDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQFN 184

Query: 183 NFKDSSRDDLIKDALMATRETLQGEKLTSSICTISILGVGEPFHILDRETVQKLI 233
             KD S  +    A+   ++ ++ EK+T +   + I  V   +H+   + V+ +I
Sbjct: 185 --KDLSLQEAETIAVSILKQVME-EKVTPN--NVDIAKVAPAYHLYTPQEVEAVI 234

[Close]

BLAST of CmoCh05G002630.1 vs. TAIR 10
Match: AT1G53850.2 (20S proteasome alpha subunit E1 )

HSP 1 Score: 156.0 bits (393), Expect = 4.5e-38
Identity = 94/235 (40.00%), Postives = 136/235 (57.87%), Query Frame = 0


Query: 3   RNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNKANSEL--SSHQ 62
           R +YD  V T+SP GRLFQVEYA+EA+K GS AIG+++K  VVLA   +  S L   S  
Sbjct: 5   RTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGVKTKEGVVLAVEKRITSPLLEPSSV 64

Query: 63  KKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKA---Q 122
           +KI ++DDHIG A+SGL AD R L  + R E  N+ ++Y  P+ V      L D A    
Sbjct: 65  EKIMEIDDHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFG 124

Query: 123 VCTQRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFE 182
              + S  RP+GV LL+ G DE+G  LYY  PSG +++  A AIGS S+ A + L+ +F 
Sbjct: 125 EGEEESMSRPFGVSLLIAGHDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQFN 184

Query: 183 NFKDSSRDDLIKDALMATRETLQGEKLTSSICTISILGVGEPFHILDRETVQKLI 233
             KD S  +    A+   ++ ++ EK+T +   + I  V   +H+   + V+ +I
Sbjct: 185 --KDLSLQEAETIAVSILKQVME-EKVTPN--NVDIAKVAPAYHLYTPQEVEAVI 234

[Close]

BLAST of CmoCh05G002630.1 vs. TAIR 10
Match: AT3G14290.1 (20S proteasome alpha subunit E2 )

HSP 1 Score: 154.8 bits (390), Expect = 1.0e-37
Identity = 93/235 (39.57%), Postives = 136/235 (57.87%), Query Frame = 0


Query: 3   RNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNKANSEL--SSHQ 62
           R +YD  V T+SP GRLFQVEYA+EA+K GS AIG+++K  VVLA   +  S L   S  
Sbjct: 5   RTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGVKTKEGVVLAVEKRITSPLLEPSSV 64

Query: 63  KKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKA---Q 122
           +KI ++DDHIG A+SGL AD R L  + R E  N+ ++Y  P+ V      L D A    
Sbjct: 65  EKIMEIDDHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFG 124

Query: 123 VCTQRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFE 182
              + S  RP+GV LL+ G DE+G  LYY  PSG +++  A AIGS S+ A + L+ +F 
Sbjct: 125 EGEEESMSRPFGVSLLIAGHDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQFN 184

Query: 183 NFKDSSRDDLIKDALMATRETLQGEKLTSSICTISILGVGEPFHILDRETVQKLI 233
             KD +  +    A+   ++ ++ EK+T +   + I  V   +H+   + V+ +I
Sbjct: 185 --KDITLQEAETIAVSILKQVME-EKVTPN--NVDIAKVAPAYHLYTPQEVEAVI 234

The following BLAST results are available for this feature:

BLAST of CmoCh05G002630.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O23712	3.6e-125	79.51	Proteasome subunit alpha type-1-B OS=Arabidopsis thaliana OX=3702 GN=PAF2 PE=1 S...	[more]
P34066	1.7e-122	79.08	Proteasome subunit alpha type-1-A OS=Arabidopsis thaliana OX=3702 GN=PAF1 PE=1 S...	[more]
P52428	4.6e-104	67.25	Proteasome subunit alpha type-1 OS=Oryza sativa subsp. japonica OX=39947 GN=PAF1...	[more]
Q27562	3.2e-73	55.46	Proteasome subunit alpha type-1 OS=Dictyostelium discoideum OX=44689 GN=psmA1 PE...	[more]
Q3T0X5	8.2e-69	52.32	Proteasome subunit alpha type-1 OS=Bos taurus OX=9913 GN=PSMA1 PE=1 SV=1	[more]

BLAST of CmoCh05G002630.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HD20	7.0e-156	100.00	Proteasome subunit alpha type OS=Cucurbita moschata OX=3662 GN=LOC111462503 PE=3...	[more]
A0A6J1KBQ0	1.2e-152	98.23	Proteasome subunit alpha type OS=Cucurbita maxima OX=3661 GN=LOC111491854 PE=3 S...	[more]
A0A5A7VC66	3.6e-152	97.87	Proteasome subunit alpha type OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc...	[more]
A0A1S3BBW8	3.6e-152	97.87	Proteasome subunit alpha type OS=Cucumis melo OX=3656 GN=LOC103487987 PE=3 SV=1	[more]
A0A0A0LLH5	1.0e-151	97.52	Proteasome subunit alpha type OS=Cucumis sativus OX=3659 GN=Csa_2G361820 PE=3 SV...	[more]

BLAST of CmoCh05G002630.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022961863.1	1.4e-155	100.00	proteasome subunit alpha type-1-B-like [Cucurbita moschata]	[more]
KAG6598460.1	3.6e-154	99.29	Proteasome subunit alpha type-1-B, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023546840.1	2.3e-153	99.29	proteasome subunit alpha type-1-B-like [Cucurbita pepo subsp. pepo]	[more]
XP_022996683.1	2.6e-152	98.23	proteasome subunit alpha type-1-B-like [Cucurbita maxima]	[more]
XP_008444739.1	7.4e-152	97.87	PREDICTED: proteasome subunit alpha type-1-B-like [Cucumis melo] >KAA0065218.1 p...	[more]

BLAST of CmoCh05G002630.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G47250.1	2.6e-126	79.51	20S proteasome alpha subunit F2	[more]
AT5G42790.1	1.2e-123	79.08	proteasome alpha subunit F1	[more]
AT1G53850.1	4.5e-38	40.00	20S proteasome alpha subunit E1	[more]
AT1G53850.2	4.5e-38	40.00	20S proteasome alpha subunit E1	[more]
AT3G14290.1	1.0e-37	39.57	20S proteasome alpha subunit E2	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000426	Proteasome alpha-subunit, N-terminal domain	SMART	SM00948	Proteasome_A_N_2	coord: 6..28 e-value: 4.5E-10 score: 49.5
IPR000426	Proteasome alpha-subunit, N-terminal domain	PFAM	PF10584	Proteasome_A_N	coord: 6..28 e-value: 6.8E-14 score: 51.2
IPR000426	Proteasome alpha-subunit, N-terminal domain	PROSITE	PS00388	PROTEASOME_ALPHA_1	coord: 6..28
IPR029055	Nucleophile aminohydrolases, N-terminal	GENE3D	3.60.20.10	Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1	coord: 1..236 e-value: 2.7E-84 score: 284.1
IPR029055	Nucleophile aminohydrolases, N-terminal	SUPERFAMILY	56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)	coord: 4..235
IPR001353	Proteasome, subunit alpha/beta	PFAM	PF00227	Proteasome	coord: 29..213 e-value: 1.0E-57 score: 194.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 242..282
None	No IPR available	PANTHER	PTHR11599:SF182	PROTEASOME SUBUNIT ALPHA TYPE	coord: 1..273
None	No IPR available	PANTHER	PTHR11599	PROTEASOME SUBUNIT ALPHA/BETA	coord: 1..273
IPR023332	Proteasome alpha-type subunit	PROSITE	PS51475	PROTEASOME_ALPHA_2	coord: 21..232 score: 76.490837
IPR035144	Proteasome subunit alpha 1	CDD	cd03749	proteasome_alpha_type_1	coord: 6..215 e-value: 3.1693E-145 score: 404.365

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmoCh05G002630	CmoCh05G002630	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh05G002630.1:exon:6493	CmoCh05G002630.1:exon:6493	exon
CmoCh05G002630.1:exon:6492	CmoCh05G002630.1:exon:6492	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh05G002630.1:three_prime_utr	CmoCh05G002630.1:three_prime_utr	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh05G002630.1:cds	CmoCh05G002630.1:cds_2	CDS
CmoCh05G002630.1:cds	CmoCh05G002630.1:cds	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh05G002630.1:five_prime_utr	CmoCh05G002630.1:five_prime_utr	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmoCh05G002630.1	CmoCh05G002630.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051603	proteolysis involved in cellular protein catabolic process
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
biological_process	GO:0010498	proteasomal protein catabolic process
cellular_component	GO:0005839	proteasome core complex
cellular_component	GO:0019773	proteasome core complex, alpha-subunit complex
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0016787	hydrolase activity