CmoCh04G029490.1 (mRNA) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh04G029490.1
TypemRNA
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionProtein of unknown function DUF2359, transmembrane
LocationCmo_Chr04: 20882296 .. 20888565 (-)
Sequence length552
RNA-Seq ExpressionCmoCh04G029490.1
SyntenyCmoCh04G029490.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAACAAGTTTCACAGAAGATATTTAGTTTTGCTGCCAAAGCAGCAGGAGAAAGTATGATACTTTGATTTTCTTTCTTTTTTTTTTTTTGTACCCTTTTGCATATCAACAGTGACTGAGAGAATATCCATTAATAGGTGTTTCAGAGCTATCTGGAGAAGCAACTAACGTTTTCATTTGGTGTTTGACGCAAAATGTTGATTGCTACAAGCAATGGGTGAGTTATTCTAGTTCTCTTCCTATACATTTAATCATTTTCATTCCAATTTTCAACTGATCTGGAATATTTTCAAATTCATCCTTTAAAATATGCAATTGTATTTTGCAGGACAAGATTTATGAGGATAACCTAGAAGCTAGTGTTTCTGTTTTGAAAAAGCTTTCTGATGACGCCGAACTAGGCACCTCTTTCGAGTATGGGAAGCCAAAAATCCCCTGGTAACAAAACTGCACCAACTAGTTAGTCCTTTTAAATCCTTCTTGTAATCCTCTTGAGGATACAAAAGTAGTGGCTTTAGTAAGTTTTTAAGTTAATACTGCTCAACAAGGCTCAATACTCATTTTAGCATCTTTTGATAAGCCTTTGTGACTTGTTATTTAATGGTGTTAACTTTAAAATTTTGTGTGTTAATCATATATGACATATATAGCATGATAACATCCTCTGATTAAGTTACATTACTTTTTTCTTAAAGGTAGAAGGAGTTATTACTTTTTTCTTAAAGGTAGGAGTTTGGTCAGCTGAAGAGGAAAAGGCAGAGTCTAAAAAGATGTAAGCTTCTGATGGGAGTGAATTTAAGAAAGTATGTTTTCTATGGTTTCTTTAGAAGTTTTTGTCTTACTAGCTTGCTTCTTGGACATTATTATATGGGTTGCCAGTCACCCGACTAGGTGAAAAAATGTTGTGAATGAGATTTGGCAATTGAATAACACTAAAAAAATTATTCACGATAAACCATGTTAGATTATTTTATGCATATACAATAAAATAAGTTAATTCTTGATTCAAAATTTTCAAAGTTGATATTTGGTGCTTATTTAACTCCAGAGTTATAGATTGGCCTATCAAATATGGATCATGTAAATATTATTTTAGATTATTCGATTCACAAACAAGCTAGAATTAGGGTCAAACTTTAACAAAAAATAATAAATGTCCACTTATAATGGTTTTAAATCATCCATATCTCATTGGTTTGTCATTATTGCTCATATTTACTTTGCTAATGTAGAAGATTTACTTTAGTAACTGTGTTGTAAAATTTTCAGATGGAAATGGTGGACATAGATGGAGATAATAAGTTGAGGTCATCTACAAGGAATCCAACTTCAATTGCTACTTTAAACACACCACGTAAGAAATTTTCTATTTGACATCATGAACTACCATATGTTCGATCTGTTCTCACAGGAATTACATTTTTGGCAATGTTGAACCAGGTTAGATTCCTATGTTTAACTTTTATTATGTCTTTGTTTTTCTTTTTTGATGTTCTTGGTGCTTCTGATATCATGTTTTTATTTCAAGAGTAAATGATTAAACTACAATAAAGGATTGTAATGAATGTTAAAGTTGAAAGAGGTTCATGAGCAAGGAATTAAATTACATCTTTTGTTTCTTGAGCTTTTTAGGTAGTTATGAATGGATCTTTTTTCATTAAAAAAATGAAAATGAAGCTTTCATGAAGATCAAATAAAAGAATACAAGAGGAACACTAGAAAACCATCCCCAGAGAAACCCAATTGACCTATAGAGTGCTCAAATCAGGCAAAATAAGACCTAAAGAATTGTTTAAAAGGAACGGGTGTCATATCCCCAAGAGGAGCCCAATTGACCCAAAAAGATATTCCAATCAAACAAAATAAGATTTAATGGTAATTACAAAAAATTGTACACAGAGGTGTGATCTAATAAGGCCACCCAAGGTCTTCCAATCATTTTGGGTACAAGGTTGATTTATGTCACAACTTGTTGGGTACTAGGAAGGAAATATGCTCCAAAATATAAGGAAAAATACAAGGATGACTAAGAAAGACTTTAAGTACATGGCCTTAAGGCAGGACAAAATGCCACAAGGGAAAATTAGAAAAATATGTCGGAGAAGGAAAAATCGATGCAAGGACCCTCAAGGAACTTGGAAGGACATAACTAAGACCAAGCACTCCCCAATGCATGGTAAGAAAAGTGAACTTCCAAAAGTTTTTAAGAGGGGGAGAATTTGTAAGAGCCCAAGTAAGATTAAGATACTTGGGTAAGTTTAAGGTGCTCAAAAAAGGTTTGAGGGATCCGAAAAATGGATTAAGAGACCCAAGGAAGGTCAATGGACCAAATGAAGAGATTTTCAATGCCCTAGCAAGGAATTATAAGGATTCAAACCTTTGAAAAAGGTTTAAAAAGAAATACTATTTACTCCAAGGAAAGACCGACTTAAGACCCGAAAGCCCACCAATAAGCCTTGTATAAGAAGGAAAAAGAGAAGTCTCTAAAATACAATCTTGAAGGAACAAGGTTGATTATGTCAAAACTTGTTGGGTACAAGGAAGGAAATATGCTCCAAGATATAAGGAAAAAGACAAAGATGGCTACATAACAAAAGGCCTCAAGGGCAAATTAGAAAAACATGTTTGAGAAGGACAAATCGATGCAAGGACCCTCAAAGAACTTGAAAGGACATAACTAAGACCAAGTACTCCCCTAATGCATGGTAATAAAAGTGAACTTTCGAGGACGAAAGTTTTTAAGAGGGGGGAATTTGTAAGAGCCCAAGCAAGATTAAGATACTCAGGACCGTTTAAGGTGCCCAAGAAAGTTTTAAGGGATCAAAAAAAAAAAAAGATTAAGAGACTGAAGGAAGGTTAATGGGCCAAAAGAAGAGATTTTCAATGCCCTAGCAAGGAATTATAAGGATTCAAGCATTTGAAAAAGTTTTGAAAACGAAATAGTATTTACTCCAAGAAAAGACGGACTTAAGACCCCAAAACCCACCAATAAGCCTTGTACAAGTAGGAACGAGAGAAGTCTCTAAAATACCACCTTGAAGGAACAAGGTTGATTATGTCAAAACTTGTTGGGTACAAGGAAGGAAATATGCTCCAAGATATAAGGAAAAACACAAGAATGACCAAGAAAGACTTAAGTACATGACCTTAAGGGAGGACAAGATGCCACAAGGGAAAATTAGAAAAATATGTCGAAGAAGGAAAAATCGATGCAAGGACCCTCAAGAAACTTTGAAGGACATAATTAAGACCAAGTACTCTCCCAATGCATGGTAATAAAAGTGAACTTTCAAGGACAAAAGTTTTTATGAGGGGGGAATTTGTAAGAGCCCAAGTAAAATTAAGATACTCGGGTTAGTTTAAGGTACCCATTAAAGTTTTAAGGGATCCAAAAAAAGAATTAAGAGACCGAAGGAAGGTTAATGGGCCAAAGAATGAAGGTTAATGGGCCAAAGAATGATTTTTTCGATGATTTTTTCAATGCCCTAGCAAGGAATTATAAGGATTCAAGCCTTTGAAAAAGGTTTTAAAAAGAAATAGTATTTACTCCAAGAAAAGACGGACTTAAGACTCGAAAACCCACCAATAAGCCATGTACAAGAAGGAACAAGAGACGTCTCTAAAATACAACCTTGAAGGAAAAAGGTTGATTATGTCACAACTTGTTGGGTACAAGGAAGGAAATATGCTCCAAAGATATAAGGAAAAACACAAGGATGGCCAAAAAAGACTTAAGTACATGGCCTTAAGGCAGAACAAAACACCACAGGGGCAAATTAGAAAAATATGTCGAAGAAGGAGAAATCGATGCAAGGACCCTCAAGGAACTTGGAAGGACATAACTAAGACCAAGTACTCCCCTAATGCATGGTAAGAAAAGTTAACTTTTGAGGACGAATGTTTTTAACTGGGGGAGAATTTGTAAGAGCCCAAGTAAGATTAAGATACTTGGTATGTTTAAGGTACCCGAGAGGGTTTTAATGGATCTAAAAAAAGGATTAAGAGAGTGTAAATGGGCCAAAGGAAGACAGAATTCCGCTCATTAAATTAAAAGGGCTATCTGCCATTGGCAAGGATATCATGTGTGGCAAAGAGGTACCTCTCCCTTTAGCTCTTAACATAAATTTGTGCATACATTATTCTGGAATTTCTTTGACATGAACACTGTTTGGTGGTCAATAATGAATGTTTGGTGGTCAATAATGAATGTGAATATAGGAAGGGGCATATATGGCTACGCTCATAATACTTCAAGCTACTAACTATTTTCTAGTTTCCAGCAGTAGCTACTTTCTTTATTTATTTTTCATACACCCTTAAAATTTCAAAATTTTAAAAAAATATAGTTAATAGTGGTATATGGGCAATTATGATTAAATACATGCTTTGTGTTTGATACTATTTTAGTTCATATAGTCTCAAATGTCCAAAATTTAGCTTATACATTTTCAATAAATCTTAAAAATAATTATTCTTTGAAATTGTTTGGTAATCAAATCTTGGAAAAGATTATTTGAAATGAACTTAAGTTAGTTTTGTGTTAGAAAGAAAGTAAGAAAGTAAGAAAGAAAAAAAATTTCTTTATGTTTTGAATCAAATTTGTGAGTGTCAGTGTTCAAGAAAAAACAACATTACCTTAAGCTGCTTTAAATTTCTTAAAAACAAAATAATTATATACTCTTTCTTTTACCTCAAAATCATTTCCTAACTTTTTCAAACAATAAATTCAAAAGAAAATAAAAGTAATATAAATTGAATCACCTTCTATTATTATATTATTTTAACTTAACAATAAGCCAAATAAATAATGACTCTTGATTTGATTTGACTGTATTTCTTATTAATTAAATAAACATTAAATAGTGACAAATAATAAAATAATTTAAATTACTCCCTTAACCTTTAAATTTATATTTATTTAGTTTCTTAATTTTTATTAGTGTTCAGTAAGTCTACCAATATTTATTTTCTAATAAAATTTTAATTTACAATTTCCTGAATAATAGATTTTTTTATATATTCAATTTATGAATTTTGTATTAAAAATAAAATTAAACTAGCGCCGACGCCTTCTTCTCTTCACCAACACACCCAAATCATTTCTTCTGATCATCACCCATCTCTTCCTCTGCCGTCCTCCGCCGCTCTTGGCGTCAGATGCCGTCCTCCCCCATGTCTCCAGCCGCCGCCTAATCAGATGGCTGATGAAGTTGGCGACCGTAGTCGGAGTTTGGAGAATCTAAAGAGAACCCATATTATTAATCGAATATATGAATTTTTATATTGGAAGTTGCAAACTGTAATGAAAATGTTGAATTTAAATATTACTGAATAAAGTATTATAAAAAGATTCAAACTCAAAAGAAAAAGTCAGAAGTAGGTTGCATACAATAGGAGGGTGCATACGAAGGAACAGTGATAGAAGAAGACGAGAGTAATGACGGCTGATCTGTGTTGTGATTGTGACATAAATTATTGGACCAATGGGATTTGGGTTCCCACCAAATACGAATTCTCTAATATCCCATTCGCCTCCGCCTCCGCTTTCTTTTTGCAAATTGCATTTTCTAGACTGGGTCCTCTTTGCTCCTATTTAATCTTTGACCCAACTGAAAATTACCATCACAACCGAGGAAATTCATTCCGGGATCGCTGTTCTTCAGCCGACGAGGTCTAAGGAGTTCGTGTCTGTTCTGGGTTTTGCTTAATTTCATCAATTTCGTTTGTTTTCGCTCCTCTTTCGGAGTTCTGTAAGTTCTGGCTAAATGGGATTTGGCTTTATCGTTCTTTCTATACTTTTGCCTGCTTGCTATGATCGGCGATTGATCGACTTCGCCGGAACTGTGCTGTATTGCTATTTGATTCACTAGTCTAGGTTTAGAAGCTTCTTGTATCAATATAACAGTTTTTGTGTAGTTCATTTGGAGTTTATAGGAATACCCATTTGTTCGAATAAATGGATTAGTGAGTAGCAACTTCTTCTGGCAAAAAGAAACAGAGATCATTGTGATTTACATAACCTATGGAATATGAAATGAAATGATTGATCGTATACGGATTATATGAATCACAGAATGCGGCTAAAGATTAGGACAATGTGTGGGATGAAAAGAATGATTCTTGTCCTTCCATGTGTGATATAGCAAACTGTTGTTTATTGTTTGAGAATTTCATCTTCATTCTTGAATATTGGATTTGGACGTTCCATTTTTCATTTGCCTTTTACATAAACATTTTGCAGGCTGCTGATCAGTAAACTTAACCTTCAG

mRNA sequence

ATGAAACAAGTTTCACAGAAGATATTTAGTTTTGCTGCCAAAGCAGCAGGAGAAAGTGTTTCAGAGCTATCTGGAGAAGCAACTAACGTTTTCATTTGGTGTTTGACGCAAAATGTTGATTGCTACAAGCAATGGGACAAGATTTATGAGGATAACCTAGAAGCTAGTGTTTCTGTTTTGAAAAAGCTTTCTGATGACGCCGAACTAGGCACCTCTTTCGAGTATGGGAAGCCAAAAATCCCCTGGTAGAAGGAGTTATTACTTTTTTCTTAAAGGTAGGAGTTTGGTCAGCTGAAGAGGAAAAGGCAGAGTCTAAAAAGATGTAAGCTTCTGATGGGAGTGAATTTAAGAAAATGGAAATGGTGGACATAGATGGAGATAATAAGTTGAGGTCATCTACAAGGAATCCAACTTCAATTGCTACTTTAAACACACCACGTAAGAAATTTTCTATTTGACATCATGAACTACCATATGTTCGATCTGTTCTCACAGGAATTACATTTTTGGCAATGTTGAACCAGGCTGCTGATCAGTAAACTTAACCTTCAG

Coding sequence (CDS)

ATGAAACAAGTTTCACAGAAGATATTTAGTTTTGCTGCCAAAGCAGCAGGAGAAAGTGTTTCAGAGCTATCTGGAGAAGCAACTAACGTTTTCATTTGGTGTTTGACGCAAAATGTTGATTGCTACAAGCAATGGGACAAGATTTATGAGGATAACCTAGAAGCTAGTGTTTCTGTTTTGAAAAAGCTTTCTGATGACGCCGAACTAGGCACCTCTTTCGAGTATGGGAAGCCAAAAATCCCCTGGTAG

Protein sequence

MKQVSQKIFSFAAKAAGESVSELSGEATNVFIWCLTQNVDCYKQWDKIYEDNLEASVSVLKKLSDDAELGTSFEYGKPKIPW
Homology
[Close]
BLAST of CmoCh04G029490.1 vs. ExPASy TrEMBL
Match: A0A6J1HKQ3 (uncharacterized protein LOC111463895 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111463895 PE=3 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 3.5e-39
Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 0 

Query: 1   MKQVSQKIFSFAAKAAGESVSELSGEATNVFIWCLTQNVDCYKQWDKIYEDNLEASVSVL 60
           MKQVSQKIFSFAAKAAGESVSELSGEATNVFIWCLTQNVDCYKQWDKIYEDNLEASVSVL
Sbjct: 60  MKQVSQKIFSFAAKAAGESVSELSGEATNVFIWCLTQNVDCYKQWDKIYEDNLEASVSVL 119

Query: 61  KKLSDDAELGTSFEYGKPKIPW 83
           KKLSDDAELGTSFEYGKPKIPW
Sbjct: 120 KKLSDDAELGTSFEYGKPKIPW 141

[Close]
BLAST of CmoCh04G029490.1 vs. ExPASy TrEMBL
Match: A0A6J1JLW0 (uncharacterized protein LOC111487064 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111487064 PE=3 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 8.6e-38
Identity = 79/82 (96.34%), Postives = 81/82 (98.78%), Query Frame = 0 

Query: 1   MKQVSQKIFSFAAKAAGESVSELSGEATNVFIWCLTQNVDCYKQWDKIYEDNLEASVSVL 60
           +KQVS+KIFSFAAKAAGESVSELSGEATNVFIWCLTQNVDCYKQWDKIYEDNL ASVSVL
Sbjct: 63  LKQVSEKIFSFAAKAAGESVSELSGEATNVFIWCLTQNVDCYKQWDKIYEDNLAASVSVL 122

Query: 61  KKLSDDAELGTSFEYGKPKIPW 83
           KKLSDDAELGTSFEYGKPKIPW
Sbjct: 123 KKLSDDAELGTSFEYGKPKIPW 144

[Close]
BLAST of CmoCh04G029490.1 vs. ExPASy TrEMBL
Match: A0A6J1FWK6 (uncharacterized protein LOC111447580 OS=Cucurbita moschata OX=3662 GN=LOC111447580 PE=3 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 6.8e-27
Identity = 63/66 (95.45%), Postives = 64/66 (96.97%), Query Frame = 0 

Query: 1   MKQVSQKIFSFAAKAAGESVSELSGEATNVFIWCLTQNVDCYKQWDKIYEDNLEASVSVL 60
           MKQVSQ+IFSFA KAAGESVS LSGEATNVFIWCLTQNVDCYKQWDKIYEDNLEASVSVL
Sbjct: 428 MKQVSQQIFSFAVKAAGESVSALSGEATNVFIWCLTQNVDCYKQWDKIYEDNLEASVSVL 487

Query: 61  KKLSDD 67
           KKLSDD
Sbjct: 488 KKLSDD 493

[Close]
BLAST of CmoCh04G029490.1 vs. ExPASy TrEMBL
Match: A0A5A7TCK6 (DUF2359 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold125G002290 PE=3 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 1.2e-26
Identity = 61/66 (92.42%), Postives = 65/66 (98.48%), Query Frame = 0 

Query: 1   MKQVSQKIFSFAAKAAGESVSELSGEATNVFIWCLTQNVDCYKQWDKIYEDNLEASVSVL 60
           MKQVSQ+IFSFAAKAAGESVSELSGEATN+FIWCLT+N DCYKQWDKIY+DNLEASVSVL
Sbjct: 427 MKQVSQQIFSFAAKAAGESVSELSGEATNIFIWCLTKNADCYKQWDKIYQDNLEASVSVL 486

Query: 61  KKLSDD 67
           KKLSDD
Sbjct: 487 KKLSDD 492

[Close]
BLAST of CmoCh04G029490.1 vs. ExPASy TrEMBL
Match: A0A5D3DA35 (DUF2359 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold228G00650 PE=3 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 1.2e-26
Identity = 61/66 (92.42%), Postives = 65/66 (98.48%), Query Frame = 0 

Query: 1   MKQVSQKIFSFAAKAAGESVSELSGEATNVFIWCLTQNVDCYKQWDKIYEDNLEASVSVL 60
           MKQVSQ+IFSFAAKAAGESVSELSGEATN+FIWCLT+N DCYKQWDKIY+DNLEASVSVL
Sbjct: 426 MKQVSQQIFSFAAKAAGESVSELSGEATNIFIWCLTKNADCYKQWDKIYQDNLEASVSVL 485

Query: 61  KKLSDD 67
           KKLSDD
Sbjct: 486 KKLSDD 491

[Close]
BLAST of CmoCh04G029490.1 vs. NCBI nr
Match: XP_022963619.1 (uncharacterized protein LOC111463895 isoform X1 [Cucurbita moschata])

HSP 1 Score: 170.2 bits (430), Expect = 7.2e-39
Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 0 

Query: 1   MKQVSQKIFSFAAKAAGESVSELSGEATNVFIWCLTQNVDCYKQWDKIYEDNLEASVSVL 60
           MKQVSQKIFSFAAKAAGESVSELSGEATNVFIWCLTQNVDCYKQWDKIYEDNLEASVSVL
Sbjct: 60  MKQVSQKIFSFAAKAAGESVSELSGEATNVFIWCLTQNVDCYKQWDKIYEDNLEASVSVL 119

Query: 61  KKLSDDAELGTSFEYGKPKIPW 83
           KKLSDDAELGTSFEYGKPKIPW
Sbjct: 120 KKLSDDAELGTSFEYGKPKIPW 141

[Close]
BLAST of CmoCh04G029490.1 vs. NCBI nr
Match: XP_022990051.1 (uncharacterized protein LOC111487064 isoform X1 [Cucurbita maxima] >XP_022990052.1 uncharacterized protein LOC111487064 isoform X1 [Cucurbita maxima] >XP_022990053.1 uncharacterized protein LOC111487064 isoform X1 [Cucurbita maxima] >XP_022990055.1 uncharacterized protein LOC111487064 isoform X1 [Cucurbita maxima] >XP_022990056.1 uncharacterized protein LOC111487064 isoform X1 [Cucurbita maxima] >XP_022990057.1 uncharacterized protein LOC111487064 isoform X2 [Cucurbita maxima])

HSP 1 Score: 165.6 bits (418), Expect = 1.8e-37
Identity = 79/82 (96.34%), Postives = 81/82 (98.78%), Query Frame = 0 

Query: 1   MKQVSQKIFSFAAKAAGESVSELSGEATNVFIWCLTQNVDCYKQWDKIYEDNLEASVSVL 60
           +KQVS+KIFSFAAKAAGESVSELSGEATNVFIWCLTQNVDCYKQWDKIYEDNL ASVSVL
Sbjct: 63  LKQVSEKIFSFAAKAAGESVSELSGEATNVFIWCLTQNVDCYKQWDKIYEDNLAASVSVL 122

Query: 61  KKLSDDAELGTSFEYGKPKIPW 83
           KKLSDDAELGTSFEYGKPKIPW
Sbjct: 123 KKLSDDAELGTSFEYGKPKIPW 144

[Close]
BLAST of CmoCh04G029490.1 vs. NCBI nr
Match: XP_038892863.1 (uncharacterized protein LOC120081776 [Benincasa hispida])

HSP 1 Score: 129.8 bits (325), Expect = 1.1e-26
Identity = 62/66 (93.94%), Postives = 65/66 (98.48%), Query Frame = 0 

Query: 1   MKQVSQKIFSFAAKAAGESVSELSGEATNVFIWCLTQNVDCYKQWDKIYEDNLEASVSVL 60
           MKQVSQ+IFSFAAKAAGESV ELSGEATN+FIWCLTQNVDCYKQWDKIY+DNLEASVSVL
Sbjct: 426 MKQVSQQIFSFAAKAAGESVPELSGEATNIFIWCLTQNVDCYKQWDKIYQDNLEASVSVL 485

Query: 61  KKLSDD 67
           KKLSDD
Sbjct: 486 KKLSDD 491

[Close]
BLAST of CmoCh04G029490.1 vs. NCBI nr
Match: XP_022942590.1 (uncharacterized protein LOC111447580 [Cucurbita moschata])

HSP 1 Score: 129.4 bits (324), Expect = 1.4e-26
Identity = 63/66 (95.45%), Postives = 64/66 (96.97%), Query Frame = 0 

Query: 1   MKQVSQKIFSFAAKAAGESVSELSGEATNVFIWCLTQNVDCYKQWDKIYEDNLEASVSVL 60
           MKQVSQ+IFSFA KAAGESVS LSGEATNVFIWCLTQNVDCYKQWDKIYEDNLEASVSVL
Sbjct: 428 MKQVSQQIFSFAVKAAGESVSALSGEATNVFIWCLTQNVDCYKQWDKIYEDNLEASVSVL 487

Query: 61  KKLSDD 67
           KKLSDD
Sbjct: 488 KKLSDD 493

[Close]
BLAST of CmoCh04G029490.1 vs. NCBI nr
Match: XP_023534603.1 (uncharacterized protein LOC111796129 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 129.4 bits (324), Expect = 1.4e-26
Identity = 63/66 (95.45%), Postives = 64/66 (96.97%), Query Frame = 0 

Query: 1   MKQVSQKIFSFAAKAAGESVSELSGEATNVFIWCLTQNVDCYKQWDKIYEDNLEASVSVL 60
           MKQVSQ+IFSFA KAAGESVS LSGEATNVFIWCLTQNVDCYKQWDKIYEDNLEASVSVL
Sbjct: 428 MKQVSQQIFSFAVKAAGESVSALSGEATNVFIWCLTQNVDCYKQWDKIYEDNLEASVSVL 487

Query: 61  KKLSDD 67
           KKLSDD
Sbjct: 488 KKLSDD 493

[Close]
BLAST of CmoCh04G029490.1 vs. TAIR 10
Match: AT1G70770.1 (Protein of unknown function DUF2359, transmembrane )

HSP 1 Score: 82.8 bits (203), Expect = 1.4e-16
Identity = 39/66 (59.09%), Postives = 51/66 (77.27%), Query Frame = 0 

Query: 1   MKQVSQKIFSFAAKAAGESVSELSGEATNVFIWCLTQNVDCYKQWDKIYEDNLEASVSVL 60
           MKQV+Q+IF+FA K AGE    L+ EAT + IW +TQN DC K WD +Y++NLEASV+VL
Sbjct: 424 MKQVTQQIFTFALKLAGEGNPVLAKEATAIAIWSVTQNFDCCKHWDNLYKENLEASVAVL 483

Query: 61  KKLSDD 67
           KKL ++
Sbjct: 484 KKLVEE 489

[Close]
BLAST of CmoCh04G029490.1 vs. TAIR 10
Match: AT1G23170.1 (Protein of unknown function DUF2359, transmembrane )

HSP 1 Score: 82.8 bits (203), Expect = 1.4e-16
Identity = 40/63 (63.49%), Postives = 49/63 (77.78%), Query Frame = 0 

Query: 1   MKQVSQKIFSFAAKAAGESVSELSGEATNVFIWCLTQNVDCYKQWDKIYEDNLEASVSVL 60
           MKQV+Q+IF+FA KAAGE    L+ EA  + IW LTQNVDC K W+ +Y DNL+ASV+VL
Sbjct: 388 MKQVTQQIFTFALKAAGEENPLLAKEAAAITIWALTQNVDCCKHWENLYTDNLKASVAVL 447

Query: 61  KKL 64
           KKL
Sbjct: 448 KKL 450

[Close]
BLAST of CmoCh04G029490.1 vs. TAIR 10
Match: AT1G70770.2 (Protein of unknown function DUF2359, transmembrane )

HSP 1 Score: 82.8 bits (203), Expect = 1.4e-16
Identity = 39/66 (59.09%), Postives = 51/66 (77.27%), Query Frame = 0 

Query: 1   MKQVSQKIFSFAAKAAGESVSELSGEATNVFIWCLTQNVDCYKQWDKIYEDNLEASVSVL 60
           MKQV+Q+IF+FA K AGE    L+ EAT + IW +TQN DC K WD +Y++NLEASV+VL
Sbjct: 424 MKQVTQQIFTFALKLAGEGNPVLAKEATAIAIWSVTQNFDCCKHWDNLYKENLEASVAVL 483

Query: 61  KKLSDD 67
           KKL ++
Sbjct: 484 KKLVEE 489

[Close]
BLAST of CmoCh04G029490.1 vs. TAIR 10
Match: AT1G23170.2 (Protein of unknown function DUF2359, transmembrane )

HSP 1 Score: 82.8 bits (203), Expect = 1.4e-16
Identity = 40/63 (63.49%), Postives = 49/63 (77.78%), Query Frame = 0 

Query: 1   MKQVSQKIFSFAAKAAGESVSELSGEATNVFIWCLTQNVDCYKQWDKIYEDNLEASVSVL 60
           MKQV+Q+IF+FA KAAGE    L+ EA  + IW LTQNVDC K W+ +Y DNL+ASV+VL
Sbjct: 434 MKQVTQQIFTFALKAAGEENPLLAKEAAAITIWALTQNVDCCKHWENLYTDNLKASVAVL 493

Query: 61  KKL 64
           KKL
Sbjct: 494 KKL 496

[Close]
BLAST of CmoCh04G029490.1 vs. TAIR 10
Match: AT3G11880.1 (Protein of unknown function DUF2359, transmembrane )

HSP 1 Score: 75.5 bits (184), Expect = 2.2e-14
Identity = 36/66 (54.55%), Postives = 49/66 (74.24%), Query Frame = 0 

Query: 1   MKQVSQKIFSFAAKAAGESVSELSGEATNVFIWCLTQNVDCYKQWDKIYEDNLEASVSVL 60
           MKQV+Q+IF ++   AG     L+ EAT + +W LT+NVDC KQW+K+Y +N EASV+VL
Sbjct: 293 MKQVTQQIFHYSLIIAGRRNLVLAKEATAIAVWSLTENVDCCKQWEKLYWENKEASVAVL 352

Query: 61  KKLSDD 67
           KKL D+
Sbjct: 353 KKLVDE 358

The following BLAST results are available for this feature:
BLAST of CmoCh04G029490.1 vs.
Match NameE-valueIdentityDescription
BLAST of CmoCh04G029490.1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1HKQ33.5e-39100.00uncharacterized protein LOC111463895 isoform X1 OS=Cucurbita moschata OX=3662 GN... [more]
A0A6J1JLW08.6e-3896.34uncharacterized protein LOC111487064 isoform X1 OS=Cucurbita maxima OX=3661 GN=L... [more]
A0A6J1FWK66.8e-2795.45uncharacterized protein LOC111447580 OS=Cucurbita moschata OX=3662 GN=LOC1114475... [more]
A0A5A7TCK61.2e-2692.42DUF2359 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... [more]
A0A5D3DA351.2e-2692.42DUF2359 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
BLAST of CmoCh04G029490.1 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022963619.17.2e-39100.00uncharacterized protein LOC111463895 isoform X1 [Cucurbita moschata][more]
XP_022990051.11.8e-3796.34uncharacterized protein LOC111487064 isoform X1 [Cucurbita maxima] >XP_022990052... [more]
XP_038892863.11.1e-2693.94uncharacterized protein LOC120081776 [Benincasa hispida][more]
XP_022942590.11.4e-2695.45uncharacterized protein LOC111447580 [Cucurbita moschata][more]
XP_023534603.11.4e-2695.45uncharacterized protein LOC111796129 [Cucurbita pepo subsp. pepo][more]
BLAST of CmoCh04G029490.1 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G70770.11.4e-1659.09Protein of unknown function DUF2359, transmembrane [more]
AT1G23170.11.4e-1663.49Protein of unknown function DUF2359, transmembrane [more]
AT1G70770.21.4e-1659.09Protein of unknown function DUF2359, transmembrane [more]
AT1G23170.21.4e-1663.49Protein of unknown function DUF2359, transmembrane [more]
AT3G11880.12.2e-1454.55Protein of unknown function DUF2359, transmembrane [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR13448:SF11TRANSMEMBRANE PROTEIN 214-LIKEcoord: 1..67
IPR019308Transmembrane protein 214PANTHERPTHR13448TRANSMEMBRANE PROTEIN 214coord: 1..67

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CmoCh04G029490CmoCh04G029490gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmoCh04G029490.1:exon:5410CmoCh04G029490.1:exon:5410exon
CmoCh04G029490.1:exon:5409CmoCh04G029490.1:exon:5409exon
CmoCh04G029490.1:exon:5408CmoCh04G029490.1:exon:5408exon
CmoCh04G029490.1:exon:5407CmoCh04G029490.1:exon:5407exon
CmoCh04G029490.1:exon:5406CmoCh04G029490.1:exon:5406exon
CmoCh04G029490.1:exon:5405CmoCh04G029490.1:exon:5405exon


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmoCh04G029490.1:three_prime_utrCmoCh04G029490.1:three_prime_utr_3three_prime_UTR
CmoCh04G029490.1:three_prime_utrCmoCh04G029490.1:three_prime_utr_2three_prime_UTR
CmoCh04G029490.1:three_prime_utrCmoCh04G029490.1:three_prime_utrthree_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmoCh04G029490.1:cdsCmoCh04G029490.1:cds_4CDS
CmoCh04G029490.1:cdsCmoCh04G029490.1:cds_3CDS
CmoCh04G029490.1:cdsCmoCh04G029490.1:cds_2CDS
CmoCh04G029490.1:cdsCmoCh04G029490.1:cdsCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CmoCh04G029490.1CmoCh04G029490.1-proteinpolypeptide


GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005789 endoplasmic reticulum membrane
cellular_component GO:0005794 Golgi apparatus
cellular_component GO:0016021 integral component of membrane