CmoCh04G013210.1 (mRNA) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh04G013210.1
TypemRNA
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
LocationCmo_Chr04: 6726114 .. 6730344 (-)
Sequence length249
RNA-Seq ExpressionCmoCh04G013210.1
SyntenyCmoCh04G013210.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAAGGAACTGCTTGTCTGTGATCTACATGACATCGAGTATGAACAGACACTGATATTTTAATGAACAATGATAATTTATTCCTTGGCTTAAACCTTATTGCTACTGGTCATATTTGGTGAGACTCGAGAGAGAAAACGTGTCTTAAAAAATTTAAATGAGAAAAGATTGCAGATATAGATATTATGGGGTAGTTTAAAAGGTGAAAAAGAATTTGATCATCCGCCCTTACTCGTTCCAACTGCAAGTTGACTGAGAAATGGAGAAGGGTTGAAAGTAGTACATTAGAAGGAACTTGAAGCTACCTCAATCTAGGCACTGACTTAAGTATCAGAATATGTTGGGTAGCACCTATTGGTGTCAGCTTCTGGTTTGCAGGTCGGTCAACCCTTCAACTACGTGTTCTGGTGATCAAAATATCAAGTCCATATATAGAATAATTGATATTTTCTCTGGCTTGCTATCATAACACTCATCTTTTAGAGTTGATAGGCCAAAAGGATGTCTTTTCTAAACTATACTGGCAGAAGATTTAGCAGGCTAATACGAGTACAAATTTATTGAAGGTTTCAGCTTCTAGGGTAAGTGTTACCGTCCAAGTCTACCATTAGCAGATATTCTCCTCTTTAGGCTGTTACAATTGATGTCAGAGTCAGACACCGGGCGTTGTGACAGCGAGAATGTTGGGCCCCAAAGGAGTGGATTGTGAGATCCCACATCAGTTGGAGAGTGGAACAAATCATTCTTTACAAGGGCATGGAAACCTCTCCCTAGCAGACGTGCTTTAAAATTTTTGAGGGAAAGTCCGAAAGGGAAAGCTCGAAGAGGACAATACCTGTTACTGGTGGACTTGGGCTGTTACAACCACACTTCCATTTTAACTATGGAATGTCACTATGATCAGAATGGTAGCCATGTTCGCAATGTCATTTTGCTGAGGAGGGAGAAAGTATAGTTCTCGACTCGTAGACAGTTTTCTACAGAGGGCAAAGTTAAAGCAGTGCAACAATCGGGAGAGATGCAAGAAAGTTGAAATTTCATGGAACTAATAGAAGACTGAAATTGGTTATAAATTTGATATTTGTTGTGAAACTGACCAGTTGCAGTTGGTATGAGTATGGAATTTTTCTTTTGATTCCATGTGTTTGCTTAAAGCACCTTTTTTTTAATGCTAATAGCAACTGTAAGAACTAAGAAGTTATCGCCATCTTGATTCATATTGCATATTTTTCGTGAGTTCAGTTGAAACTATTCGTTTGAGCTCTTTATCGATATGTCACTTTTCTATGGCTGTTTGCACAAGAATGCAAATGCAGAGATGCATAGGTGAATAAAAACTTGCTGGTTCGTTAATTTACATTGGTAAATTTTCCAATCAAGGTAGCTTCTGAACTATCCATATCTTATAAACGACTTTGTTTTCCTTGATTTATCATAGTAATGCTGTATGATACTACAAAATTGATATATGCACCTACCATTGTTCAACTGTTCCTCACCGCTTTCCAAATTTAGTTTATAAATTCACTTTTTTACACCTTTAATTAAATTTGAATTATCCTGCAGTTACCTTGTTAACCGATGCTCTAGGAAAAAAAGGCGCAGGATATACTAGCAAATCTACAGACAGCAGGCGACTCCTGCATTTTATGATGCCTTCTCAAGTTGAGTTCAAGTGTGGGAGCCATCATGACAAGGATTTTGCCTTTTGGAATATTCTTTGACCTGGAGCAAGTATTGCCAAAGGGTCATAAGCTTTTTTTCTCTGTACATATGTTTCCCACATTGGGCCAAAATGGGCCTGCCATTCGTTCCTTGTAGTATAATGTGGCAAATATTGTTTTGCTCCTAGATTGGCTGTTCTACAGAATTCCAGAATTCTCATGTTCTGAGCTAAGATGTATTCTAAGCTGTTGTTTCCTCTAGAAAAAGGAACTGCAGAGGTTAGAAACGCCACCAGGTAGAAAATCTCCTCCTCTGGAATAACTACAGAAGTTCTATTGTCCCACCTGAAATTCAGAAATAATTGAATCAACACAATACATATTGCTAGAATGTTTTAGCCAGTAACTTAGTTAGACAGTCAATTACTTTGATTTGTTAAGTGGATAGATTAGGACAGGGCCGTTGCTTGTTTCCTTCAGGATATTGCCGAAAACCCCTTCTGCAAATTTTTTTATTTTACTTTTTGGAACAAGGAGATTCAGCCATGGGTGTGGGACTTCCCACAAGCCTTTTGACTGTAGTTTGACGGCTGATACTTGAACTCTGTCCAGGAATTCCACATATGTAACTTCTGATATGAAAAGTGTTGATGGGATATAACTTAACTGAGACAACAAGCGTGTGACTTCCTGCATAGTAAAAGCATGTGCATATGAAATCCTCTGAACCAAATATATTTTCCCATGTATTTATTTGATCCTTTTTACATAGATTTAATGTGAGTACTTTACCTGATCGATAATGTTGTCCTCGGTGTGGTGAAAGTACTTGGCCAATTCTAGGCAATAAAGAATTTTTCCATCAGACTTGAACTGGCTAGCTTGAACTGGGTCTTGTGGATTGAATGATGATCTCCAATTATTCAAAAGACCAGTTCTGTTTATTATCACGAATCCCTCTATGTAGTCGAATGTATTTTCTGCAGATATCAAGAGCTCCTGCTCTGAGGAAAAAGTAGTGAAGTCTAAGTACAGCACCCTTATCCATTTTACCTGTCAAAGATAGAAGAATTGTGTTAGAACAGTCCTTCATAAACACTTTAGACGAAATCTTCCAAGTTTCCTTTACAAACAATAATCTTACCATTGTTGGCGCTGGTTCAAGTAGAATTTTTGCCCTTGTGATAATTCCAAACTGGCCTAATCCTCCAAGAACACCGTAAAAGAGGTCACTGTTCTGTTCCTTTGAACAGCTTACCACATCCCCTTTTCCTGAATTTAGTTTCAATCCATTTGTCAGTAAACGTAATGTTATGCTGCCTGGTACCAGCTCATTTTTTGATAAGTTTCAACTGTCTTTAATGACTTTATGATTGGGTGATGAAATACATACAGTAAGAGAACTTGGCAACTTAATCGGCCACCTATGGGACATGGCGTTAAGACAAGTCAATAGTTTGCCACTTATCTTTTCAATTCTTTCCCTACTTTTGTTTGTCATTCACTGTGCAATTATTAACTGCATGGATTTCCTTCCCCATTACTCTTTTAACATTTACATGCCCACAGGAGCCAGAGACATACTCTTGCAAATGTATAGTATAATGTATATGGCAACGAACCTGTTACAACCTCCAGCTGATGAACGTTGCTGATCTGAGGGCCATGCCGAAATGCCTGTCCGCTGATCCCTGCATTGGATAAAGTACCTCCAACCGTTAGATGTAGGTAGTCTGTCCATGATTTTGGTGTTAATCCGTATTTCAAGCTCTCGTGCAGGATATTTATCCATAACTCCCCTCCAGAAACATCGACGTAAGTAAAGTTTCTGGTATGAACCTGCATTTGAGGGTCCTGGAGTGATTCCATGTTAATCACAACTCCTTGGTGGGCCTGCGCTTGGCCATGGAGCGAGTGGCCATGGCCTCTAGCTGCAACTGTGAGCTCTGAACGAGGTCCCATCTTCCAAATATGCTCTATAGTCATGGCGATATCAGAAACTGATGATGGATGCAGTACTGCTGCAGGGTAATATTGATATCGATTACCGAAGTCTCTTGCGGCAAATTGCACTTTGTCAAACTCAAAATGCCCGTTGATGGAAAGCATCTTGAGTGACGAATGGATGCCTGTGAAGCATAGATTCATCCTAACAGCAATACAGCTCAGGAACAAAAGCATAAAGCTTCGGGTGGAAAGCATGCTGTTTTGTTATTTCTAACGAGCAAACGCACAAGAGGTGGAGGAGGGCCTAAGAAAATGCTGAACTTGAGGTGGATTTAAAGGGAGATTAAGATTATAGCGGCTGAGTCATTTAGACTTCAGTTGGGAGAATACGTATGAAGACTGCCTACTTAGGGAAGAGTTTCGGGATTTCCTTTTTGTTTCTCACTGACATTAATTATGAGGTTACTCTTCTTCAATCCTATTATTGCCGGAATTTAACATTGCGTATCTAGTTTCAGATTCAGTCAGAAGAGGATACTAGCCCATGTTGATTCATTGGAGACGAAGACAGAAGGATCAGCAGGTCGTCAGAGGGTCCATTATACACGTGATATTTAA

mRNA sequence

ATGGAAAGGAACTGCTTGTCTGTGATCTACATGACATCGATTACCTTGTTAACCGATGCTCTAGGAAAAAAAGGCGCAGGATATACTAGCAAATCTACAGACAGCAGGCGACTCCTGCATTTTATGATGCCTTCTCAAGTTGAGTTCAAATTCAGTCAGAAGAGGATACTAGCCCATGTTGATTCATTGGAGACGAAGACAGAAGGATCAGCAGGTCGTCAGAGGGTCCATTATACACGTGATATTTAA

Coding sequence (CDS)

ATGGAAAGGAACTGCTTGTCTGTGATCTACATGACATCGATTACCTTGTTAACCGATGCTCTAGGAAAAAAAGGCGCAGGATATACTAGCAAATCTACAGACAGCAGGCGACTCCTGCATTTTATGATGCCTTCTCAAGTTGAGTTCAAATTCAGTCAGAAGAGGATACTAGCCCATGTTGATTCATTGGAGACGAAGACAGAAGGATCAGCAGGTCGTCAGAGGGTCCATTATACACGTGATATTTAA

Protein sequence

MERNCLSVIYMTSITLLTDALGKKGAGYTSKSTDSRRLLHFMMPSQVEFKFSQKRILAHVDSLETKTEGSAGRQRVHYTRDI
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CmoCh04G013210CmoCh04G013210gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmoCh04G013210.1:exon:4237CmoCh04G013210.1:exon:4237exon
CmoCh04G013210.1:exon:4238CmoCh04G013210.1:exon:4238exon
CmoCh04G013210.1:exon:4239CmoCh04G013210.1:exon:4239exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmoCh04G013210.1:cdsCmoCh04G013210.1:cds_3CDS
CmoCh04G013210.1:cdsCmoCh04G013210.1:cds_2CDS
CmoCh04G013210.1:cdsCmoCh04G013210.1:cdsCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CmoCh04G013210.1CmoCh04G013210.1-proteinpolypeptide