CmoCh03G002350.1 (mRNA) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTACCACAAACTAGTAGTAATGTCACGTTGACACCATTCCATACTTGATAATGTGCTAATCACTCAACTCTAATGCCTTGAATGTCAAGGGCATCAAGCTTCTTGGGTCTTTTGTAATACTTGAGCAGGAGAGAACTGCAAACAACACTAACAGAAGAGGCAGCCATTGCTGCTCCTGCAATCCATGGCGGTAACCGAAATCGAGTTGCTGGGAATAGGACTCCTGCTGCAATAGGGATACCGAGGAGATTGTAACCGAGCGCCCAAACGTAGTTCAGACGGATCCTGGAAAACGTTTTCCTTGAAAGGTCGATGGCTGTTATGACATCCTCCAAGTTGCTTTTCATAAGAACTATGTCAGCTGCCTCAATGGCGATGTCTGTGCCTGCACCAATTGCCATTCCAACATCTGCAGCCACAAGCGCCGGTGAGTCGTTGATCCCATCTCCCACCATTGCCACCGTATGA ATGTACCACAAACTAGTAGTAATGAGAGAACTGCAAACAACACTAACAGAAGAGGCAGCCATTGCTGCTCCTGCAATCCATGGCGGTAACCGAAATCGAGTTGCTGGGAATAGGACTCCTGCTGCAATAGGGATACCGAGGAGATTGTCGATGGCTGTTATGACATCCTCCAAGTTGCTTTTCATAAGAACTATGTCAGCTGCCTCAATGGCGATGTCTGTGCCTGCACCAATTGCCATTCCAACATCTGCAGCCACAAGCGCCGGTGAGTCGTTGATCCCATCTCCCACCATTGCCACCGTATGA ATGTACCACAAACTAGTAGTAATGAGAGAACTGCAAACAACACTAACAGAAGAGGCAGCCATTGCTGCTCCTGCAATCCATGGCGGTAACCGAAATCGAGTTGCTGGGAATAGGACTCCTGCTGCAATAGGGATACCGAGGAGATTGTCGATGGCTGTTATGACATCCTCCAAGTTGCTTTTCATAAGAACTATGTCAGCTGCCTCAATGGCGATGTCTGTGCCTGCACCAATTGCCATTCCAACATCTGCAGCCACAAGCGCCGGTGAGTCGTTGATCCCATCTCCCACCATTGCCACCGTATGA MYHKLVVMRELQTTLTEEAAIAAPAIHGGNRNRVAGNRTPAAIGIPRRLSMAVMTSSKLLFIRTMSAASMAMSVPAPIAIPTSAATSAGESLIPSPTIATV Homology
BLAST of CmoCh03G002350.1 vs. ExPASy TrEMBL
Match: A0A0A9PTB8 (Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1) HSP 1 Score: 76.6 bits (187), Expect = 6.5e-11 Identity = 47/52 (90.38%), Postives = 49/52 (94.23%), Query Frame = 0
BLAST of CmoCh03G002350.1 vs. ExPASy TrEMBL
Match: A0A803LQK5 (Uncharacterized protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1) HSP 1 Score: 59.3 bits (142), Expect = 1.1e-05 Identity = 29/40 (72.50%), Postives = 33/40 (82.50%), Query Frame = 0
BLAST of CmoCh03G002350.1 vs. ExPASy TrEMBL
Match: A0A5A7Q0B8 (2-dehydro-3-deoxyphosphooctonate aldolase OS=Striga asiatica OX=4170 GN=STAS_14866 PE=4 SV=1) HSP 1 Score: 58.5 bits (140), Expect = 1.8e-05 Identity = 35/41 (85.37%), Postives = 38/41 (92.68%), Query Frame = 0
BLAST of CmoCh03G002350.1 vs. ExPASy TrEMBL
Match: A0A1V5TC75 (Uncharacterized protein OS=Firmicutes bacterium ADurb.Bin262 OX=1852887 GN=BWY37_02069 PE=4 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 2.0e-04 Identity = 35/59 (59.32%), Postives = 42/59 (71.19%), Query Frame = 0
BLAST of CmoCh03G002350.1 vs. NCBI nr
Match: GER38346.1 (2-dehydro-3-deoxyphosphooctonate aldolase [Striga asiatica]) HSP 1 Score: 58.5 bits (140), Expect = 3.8e-05 Identity = 35/41 (85.37%), Postives = 38/41 (92.68%), Query Frame = 0
BLAST of CmoCh03G002350.1 vs. NCBI nr
Match: OQA64375.1 (hypothetical protein BWY37_02069 [Firmicutes bacterium ADurb.Bin262]) HSP 1 Score: 55.1 bits (131), Expect = 4.2e-04 Identity = 35/59 (59.32%), Postives = 42/59 (71.19%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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