CmoCh02G016310.1 (mRNA) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh02G016310.1
Type	mRNA
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	MSC domain-containing protein
Location	Cmo_Chr02: 9401143 .. 9406378 (+)
Sequence length	1672
RNA-Seq Expression	CmoCh02G016310.1
Synteny	CmoCh02G016310.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAAAAAAAAAAAAAGGGAAAAAAAAGAGTAGTTTACTGATGTGGAAGGTTATTTTTGTCAAAACAACCAAGATAACCTAACCTACACCATAAATGGAGGGTATTTTGAGAAAATTAATTTTTGTACCGCTCACGAAGCCCAATTTTCCAAAATAAAAAAAAAGGAGGCAAAGGAACGAAGCTGGAGAGGGGACTGAGCGAGGCCGCGAAGAACGACGTTTATCGATGTCTTCAACTCCGAAGAGGCGAACGAAATTCAAGCATAATCTGAACTCTGATGTCGCTTCTAAACGCGATTCTTATGGTTCATCTTCTGCAGTGTTGCTGAATTCTATCAAGGGACCGCCTCGTGATTTCTTTCCCTCGAAGGATGATCTTACTAGGCTAATTACTGTACTTTTCATCGCCGGCTTGGTTTTTGTGAGTTGTAACTTCTTTGTATCTAGACTTGAAACTCGCCGCCCGAGGCCTTTCTGCGACTCCGACGCCGATTCTTTTGATTTGCTTTCTGGTAAGTCGTAGCATTGTTCAACCTTTCCTGTGTTTGGTGTTTAAAAACTCGAAGATGAGGAATTTGAAAATGAATTTTTTGAATGATGATTTCTAGCGTATGTTTGTTCTTTCTGAAGTAATGCTTTGTGTCTTCACAATTTTGGTGCACATTTTAGCTCATTTTTGGACGTTGCATTTAGTTTTTGTTCTTTCGTTTGCCAACAATAAATTCCGGTCACTTCAAATGGTTGTCTTATGCATAATGGCGCCATTAACTAGTACTTTCTGTTATGCACTCGTGCAAACTTGTGGAACCATAATATCATATCCTCTTTCATGGTAAAGCGAACATACTAAGATAAAGTCACTATCTCCTCTGATGAGAGAGACAAGATCAGCATCCGACGTAGAGCCCTTTGATAAACCTGATTAAGTCAGTGGTTAGCGATTGCAAAGAGAACGCTCCTTGATTAAGTCAGTGGTTAGTCGTCTGCAGAATGTTTGACTCGAGATCATCTTGTCATCCATTATATTGTTTAGAGGCGATAGATTAAAATTTGTTCTGTTTTATTCTTTGTTCATATTGCATCAACTTTTTTTTCTGTTAAAACTTGCAGGCCTTTTAGCTTTACCCTAACATTTGCTTCTTCTAACTTTCTGTTTATTTTATTTATGACTTCCAAGTTGAACGTAAAGCCAGTATAAGTGATTACATATGAAGTAATCTGTCGATGGTGATTAGTTTGGTTTTGTTCTGATAGTTCATACTTCTAACCAAAATATATATAACTAATTTCAGATGCTTGTGAGCCTTGTCCAAGTCATGGAGAATGCCATGAAGGTAAGTTGGAATGCGGTCATGGTTATAGAGAGCATGGTAGGTTATGTATAGAAGATGGAGTAATCAATAAAGCAGTTAAGAAACTTGTATGTGTGAGGTTTTTTCCCTGGTAACTGTAATTTTCTCTCTCCGTTTTCTTATTGGTCATAATTTCACACTTCTTTATCCTATTGTTGCAGTCAGAATGGCTAGAATCTCACCTCTGTGAAGCAAATGCCAAGTTTTTATGCGATGGAATTGGGATAGTTTGGGTTTGTTATCTCGGTGTCCCTATAAAAATTTCAGTTTTGTATTTATTTCCCTCTTCAATAGCACTCTAGCCTTGCTCCTTTTTGTTGTGGCGCCTCTATTTTGTTTCTCTCTTATTTAGTGTTAAGTTTAATGGTTCAAATTTAGTTGCACGTTTAATGTGGAAGGACCTAGTATTTTTGTTGTCAGCACACGGAGTTTTGATTTTAATTCATTATCAGGTTCAAGAGGATGCTATATGGGACGATCTCGATGGTAAAGCGCTGGTGGAAAACATTGATTCTGACAACACCACTATTATGTATGCAAAGAGCAAGGCATTGGAAACTATTGGTGGGTTATTCCAGGCACGGCAAAATGCTCTTGGGTATGCCATTCAACTTTTTGTATAAAGTCAGAGCCTTAGTGGAAACAATGTATCATTTGATTAAAATATGTGCTGATTGAATTTCTTTGCATCCTCCTCGTTGTGTAGTATCAAGGAATTGAAATGCCCAGATCACCTAGCTGAAAGTTACAAGCCTTTTACTTGCCGTATTCGTCACTGGGTTTTGCAGCATGCTTTTGTTGTTTTGCCAGTTTCCTTACTGGTATTCTACTCTACAAGGGAGCTTTGAACTGATTAGGTTTTAGTTGCAATATGTTGAAGCTAGTTGATGATATTGAGATGTACAGCTCGTGGGATGCACATGGTTACTATGGAAACTTTGCCGGAGACAATATCTAACTAATAGAGCTGAAGATCTGTACAACCAGGTATAAGCTATGGCTTTTTCAATTTTATTTTTCAAGTAGTCATTTTTCTTTGCGTGATTTGCTTTGTTGTTAGGTTGGTTCCTATTTGAAGCTAAAATTTTGTCCTCTCAGCATGCGTAGTCTGATTAACATTGTTAATTCACTACATAGATGGCAAATAAAAGATCTTCCAACTGATGAATTTTAGAATAGAAAATAATTGTAGCATGCATGCTTATTAATTCTTTTCCATGTGGTACTTTGTGATTGACCCTCCTGAAACAATTTCAGTTTCTTTCCTCTAAAGTTGAGACTTCGTTGAGATATGAAGTTTTATGCTATTCTCTAGTTTGCAATCATAAGTACAGAATTTTCAAGTTGTTGATCTCCCAATCAGGATTGTTTTAGAAGTTTATCACATTGAGTATTTGAAGTCCCAAAACTTTTTTTATATTTATTGACTAAAAAATTTCATCTTCTACTGTCAAGATAAATTGAAGTGTGACCAGATTTTTCACATACAGTTCGTGTGGTAATAAGAGAAACCCTTACCCCAAGACGTTTTGCCAACCCCGGTAGATTTTTTTCACTCTAATGCTAATCTCTCGGTCTTCATTACAGGTTTGCGAAATACTTGAGGAAAATGCTTTGATGTCAACGAGGAACAGTGGACAATGTGAATCATGGGTTGTTGCTTCTAGGTTACGTGACCATCTTCTTTTGCCACGAGAGAGGAAGGATCCTTTATTATGGAGAAAGGTATCACGTCCCTCCTTGACTCTCATTTTTTCTTATTTCATTTAGAATCATTACATTTTGTTTTTTGTCGCATGGATTTTTAACGTTTACTGAAGTTACAATCCGAGTGGTGGATGTAGTTCTGAATATTTGGCAATAGAGTTTGCTAAAATACTTAGGTCGTTCAAATTCATTGAAATGTACATAGAAAAATGTTTTCTCGATTCATATGCGAGATGGATTTTGATAGATGAATAATTCTTTTTGGATATAGCCATGGCTAAAATTTGGAAACCAATCTGAAATCCTAATTTTTTCCATCAACAAAGATTAAAGAGATCACATAATCTGTTTGTCCTCTCCCCATTCCAATTTATAATCACTTCATTTGATGTTCTTCTTGATGCTTTCCCTAATTAAGTTAAATTACAAGTTTAGTTCTTTACCTTTCATGTTTATTTGTAATTATCCTACTTGTTTTCTTGTTTCCTACATTAATGAAATTGTTTGCTTCCTGAAAAAACACTTCCATATTTGTGTTTTGGTCTCTAAACTTTAAAAAAAATATTTGTTAGGTTTTGAATTTAAATTTTATGTATAAAAGGTCTTTGATATATTAAAAAATTAACAAATGATTAGATATTAAACACAAAATTAAAGTACAAGGACTCATTGAACACAAATTTGAAAGTTTTGGGAATCATTAATACATAAGTTCAAGAATTTGTAAACACAAAATTAAAAGTTTATGGTCCTACTAAATATCCTTTTAAAGCTAAGGAACATGTTTGGCACAAACATGAAAGTTAAGGGATTAAATTTATGATCTTACCATTACTTTATTTTATGTAGGTAGAAGAGTTGGTTCAGGAAGATTCACGAATAGATCGGTACCCGAGATTGGTCAAGGGGGATGGAAAAGAAGTATGGGAATGGCAAGGTATGAAATATTTTTTCTTTTCATTTCTAATTCCTAATATAGAATGAGATAAACTCATCTATAAATAAAATCATGATGACTAGATATGGAACTCGTCCCTAGACAAAATTCATATATTATGCCAACAAAATTCATATATTATGCCAACATGCACCTAACTTTCCTCATGAGGTTGTGGGTTTGAATTCCCAACCTCACATGTGATTTAATATTCTAAAAAGGAAAATACGTATATTATAACAATATAAACATGGTTAATTTTTAACTTGGGATGATTCGTGCAAAATTCTTTTTGGTATACATTTATGCAGACACATTTAAAGGGTTAATTTTAAATTTGAAAAGTGGAGAGATAAAATAGAATATTAGGAACTTTTGGAACGCAGATGAATCGAGGACTTGCATTTAAACCCATCTTTTTAAGTTAGAAGCACTAAAAGCTTGGGGACTCAAACATGAATTGTTACAAGACAGAGCGAGCAAAACGATTCTTTTGGCGTTGTCATCTCCAGTACAAGTAAATCTGATATCCTTGTTCTTGTTGAACAGTAGAAGGCTCTTTAAGCTCTTCAAAGGAAAAGAGACTGGCTAGCAAATCCAGTTCCAGAATGGTGATGGGAGTAAATTCTGACGTAATATACTCAAAAATGGAGAACGGTGAGTTATATATATGCTTGATCGAGTTACAGAATCGGGTTTTTTCTCCATTCTCATGCTATGTCGACTTTCTTCCATTCATTTAGTTTTGAAAAATGACTAAACTAATGCACAGAGCTGAAGGCAGTAGTTTCGTGACATGGCGCTCGTCCATGAGGATATTGTAGCTTAGCTGGTTAATAGAAAGAATGAAAACAAGAGGTACAAGATTTAAAAGTCCATAATTATTTTGTTTGATTCTTGTGTGAAGTACTTGTTAAGCTGGTTCTGTTGCGACAACTGGGGCCTGTAGGGGTATGAGGTACTGTAATATTAATTCCTTTCCACTGTTCTTTCCATAGCACTTCGTTAATCTGCTTCTGTTGCGACAACTGGGGTCTGTAGGGGTATGAGGTACTGTAATATTAATCCCTTCAAACTGTTCTTTCCATAGCACTTTGTTAATCTGCTTCTGTTGCGACAACTGGGGCCTGTAGGGGTATGAGGTACTATAATATTATTCCCTTCTACTGTTCTTTCGATAGCACTATCTTGCCCCCTCCCACCTGGAGAATCCCATAGTATTTTAATGGACTGTTTGCGTG

mRNA sequence

AGAAAAAAAAAAAAAGGGAAAAAAAAGAGTAGTTTACTGATGTGGAAGGTTATTTTTGTCAAAACAACCAAGATAACCTAACCTACACCATAAATGGAGGGTATTTTGAGAAAATTAATTTTTGTACCGCTCACGAAGCCCAATTTTCCAAAATAAAAAAAAAGGAGGCAAAGGAACGAAGCTGGAGAGGGGACTGAGCGAGGCCGCGAAGAACGACGTTTATCGATGTCTTCAACTCCGAAGAGGCGAACGAAATTCAAGCATAATCTGAACTCTGATGTCGCTTCTAAACGCGATTCTTATGGTTCATCTTCTGCAGTGTTGCTGAATTCTATCAAGGGACCGCCTCGTGATTTCTTTCCCTCGAAGGATGATCTTACTAGGCTAATTACTGTACTTTTCATCGCCGGCTTGGTTTTTGTGAGTTGTAACTTCTTTGTATCTAGACTTGAAACTCGCCGCCCGAGGCCTTTCTGCGACTCCGACGCCGATTCTTTTGATTTGCTTTCTGATGCTTGTGAGCCTTGTCCAAGTCATGGAGAATGCCATGAAGGTAAGTTGGAATGCGGTCATGGTTATAGAGAGCATGGTAGGTTATGTATAGAAGATGGAGTAATCAATAAAGCAGTTAAGAAACTTTCAGAATGGCTAGAATCTCACCTCTGTGAAGCAAATGCCAAGTTTTTATGCGATGGAATTGGGATAGTTTGGGTTCAAGAGGATGCTATATGGGACGATCTCGATGGTAAAGCGCTGGTGGAAAACATTGATTCTGACAACACCACTATTATGTATGCAAAGAGCAAGGCATTGGAAACTATTGGTGGGTTATTCCAGGCACGGCAAAATGCTCTTGGTATCAAGGAATTGAAATGCCCAGATCACCTAGCTGAAAGTTACAAGCCTTTTACTTGCCGTATTCGTCACTGGGTTTTGCAGCATGCTTTTGTTGTTTTGCCAGTTTCCTTACTGCTCGTGGGATGCACATGGTTACTATGGAAACTTTGCCGGAGACAATATCTAACTAATAGAGCTGAAGATCTGTACAACCAGGTTTGCGAAATACTTGAGGAAAATGCTTTGATGTCAACGAGGAACAGTGGACAATGTGAATCATGGGTTGTTGCTTCTAGGTTACGTGACCATCTTCTTTTGCCACGAGAGAGGAAGGATCCTTTATTATGGAGAAAGGTAGAAGAGTTGGTTCAGGAAGATTCACGAATAGATCGGTACCCGAGATTGGTCAAGGGGGATGGAAAAGAAGTATGGGAATGGCAAGTAGAAGGCTCTTTAAGCTCTTCAAAGGAAAAGAGACTGGCTAGCAAATCCAGTTCCAGAATGGTGATGGGAGTAAATTCTGACGTAATATACTCAAAAATGGAGAACGAGCTGAAGGCAGTAGTTTCGTGACATGGCGCTCGTCCATGAGGATATTGTAGCTTAGCTGGTTAATAGAAAGAATGAAAACAAGAGGTACAAGATTTAAAAGTCCATAATTATTTTGTTTGATTCTTGTGTGAAGTACTTGTTAAGCTGGTTCTGTTGCGACAACTGGGGCCTGTAGGGGTATGAGGTACTATAATATTATTCCCTTCTACTGTTCTTTCGATAGCACTATCTTGCCCCCTCCCACCTGGAGAATCCCATAGTATTTTAATGGACTGTTTGCGTG

Coding sequence (CDS)

ATGTCTTCAACTCCGAAGAGGCGAACGAAATTCAAGCATAATCTGAACTCTGATGTCGCTTCTAAACGCGATTCTTATGGTTCATCTTCTGCAGTGTTGCTGAATTCTATCAAGGGACCGCCTCGTGATTTCTTTCCCTCGAAGGATGATCTTACTAGGCTAATTACTGTACTTTTCATCGCCGGCTTGGTTTTTGTGAGTTGTAACTTCTTTGTATCTAGACTTGAAACTCGCCGCCCGAGGCCTTTCTGCGACTCCGACGCCGATTCTTTTGATTTGCTTTCTGATGCTTGTGAGCCTTGTCCAAGTCATGGAGAATGCCATGAAGGTAAGTTGGAATGCGGTCATGGTTATAGAGAGCATGGTAGGTTATGTATAGAAGATGGAGTAATCAATAAAGCAGTTAAGAAACTTTCAGAATGGCTAGAATCTCACCTCTGTGAAGCAAATGCCAAGTTTTTATGCGATGGAATTGGGATAGTTTGGGTTCAAGAGGATGCTATATGGGACGATCTCGATGGTAAAGCGCTGGTGGAAAACATTGATTCTGACAACACCACTATTATGTATGCAAAGAGCAAGGCATTGGAAACTATTGGTGGGTTATTCCAGGCACGGCAAAATGCTCTTGGTATCAAGGAATTGAAATGCCCAGATCACCTAGCTGAAAGTTACAAGCCTTTTACTTGCCGTATTCGTCACTGGGTTTTGCAGCATGCTTTTGTTGTTTTGCCAGTTTCCTTACTGCTCGTGGGATGCACATGGTTACTATGGAAACTTTGCCGGAGACAATATCTAACTAATAGAGCTGAAGATCTGTACAACCAGGTTTGCGAAATACTTGAGGAAAATGCTTTGATGTCAACGAGGAACAGTGGACAATGTGAATCATGGGTTGTTGCTTCTAGGTTACGTGACCATCTTCTTTTGCCACGAGAGAGGAAGGATCCTTTATTATGGAGAAAGGTAGAAGAGTTGGTTCAGGAAGATTCACGAATAGATCGGTACCCGAGATTGGTCAAGGGGGATGGAAAAGAAGTATGGGAATGGCAAGTAGAAGGCTCTTTAAGCTCTTCAAAGGAAAAGAGACTGGCTAGCAAATCCAGTTCCAGAATGGTGATGGGAGTAAATTCTGACGTAATATACTCAAAAATGGAGAACGAGCTGAAGGCAGTAGTTTCGTGA

Protein sequence

MSSTPKRRTKFKHNLNSDVASKRDSYGSSSAVLLNSIKGPPRDFFPSKDDLTRLITVLFIAGLVFVSCNFFVSRLETRRPRPFCDSDADSFDLLSDACEPCPSHGECHEGKLECGHGYREHGRLCIEDGVINKAVKKLSEWLESHLCEANAKFLCDGIGIVWVQEDAIWDDLDGKALVENIDSDNTTIMYAKSKALETIGGLFQARQNALGIKELKCPDHLAESYKPFTCRIRHWVLQHAFVVLPVSLLLVGCTWLLWKLCRRQYLTNRAEDLYNQVCEILEENALMSTRNSGQCESWVVASRLRDHLLLPRERKDPLLWRKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSKEKRLASKSSSRMVMGVNSDVIYSKMENELKAVVS

Homology

[Close]

BLAST of CmoCh02G016310.1 vs. ExPASy TrEMBL
Match: A0A6J1H2A7 (uncharacterized protein LOC111459381 isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111459381 PE=4 SV=1)

HSP 1 Score: 806.2 bits (2081), Expect = 6.0e-230
Identity = 394/394 (100.00%), Postives = 394/394 (100.00%), Query Frame = 0


Query: 1   MSSTPKRRTKFKHNLNSDVASKRDSYGSSSAVLLNSIKGPPRDFFPSKDDLTRLITVLFI 60
           MSSTPKRRTKFKHNLNSDVASKRDSYGSSSAVLLNSIKGPPRDFFPSKDDLTRLITVLFI
Sbjct: 1   MSSTPKRRTKFKHNLNSDVASKRDSYGSSSAVLLNSIKGPPRDFFPSKDDLTRLITVLFI 60

Query: 61  AGLVFVSCNFFVSRLETRRPRPFCDSDADSFDLLSDACEPCPSHGECHEGKLECGHGYRE 120
           AGLVFVSCNFFVSRLETRRPRPFCDSDADSFDLLSDACEPCPSHGECHEGKLECGHGYRE
Sbjct: 61  AGLVFVSCNFFVSRLETRRPRPFCDSDADSFDLLSDACEPCPSHGECHEGKLECGHGYRE 120

Query: 121 HGRLCIEDGVINKAVKKLSEWLESHLCEANAKFLCDGIGIVWVQEDAIWDDLDGKALVEN 180
           HGRLCIEDGVINKAVKKLSEWLESHLCEANAKFLCDGIGIVWVQEDAIWDDLDGKALVEN
Sbjct: 121 HGRLCIEDGVINKAVKKLSEWLESHLCEANAKFLCDGIGIVWVQEDAIWDDLDGKALVEN 180

Query: 181 IDSDNTTIMYAKSKALETIGGLFQARQNALGIKELKCPDHLAESYKPFTCRIRHWVLQHA 240
           IDSDNTTIMYAKSKALETIGGLFQARQNALGIKELKCPDHLAESYKPFTCRIRHWVLQHA
Sbjct: 181 IDSDNTTIMYAKSKALETIGGLFQARQNALGIKELKCPDHLAESYKPFTCRIRHWVLQHA 240

Query: 241 FVVLPVSLLLVGCTWLLWKLCRRQYLTNRAEDLYNQVCEILEENALMSTRNSGQCESWVV 300
           FVVLPVSLLLVGCTWLLWKLCRRQYLTNRAEDLYNQVCEILEENALMSTRNSGQCESWVV
Sbjct: 241 FVVLPVSLLLVGCTWLLWKLCRRQYLTNRAEDLYNQVCEILEENALMSTRNSGQCESWVV 300

Query: 301 ASRLRDHLLLPRERKDPLLWRKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSK 360
           ASRLRDHLLLPRERKDPLLWRKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSK
Sbjct: 301 ASRLRDHLLLPRERKDPLLWRKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSK 360

Query: 361 EKRLASKSSSRMVMGVNSDVIYSKMENELKAVVS 395
           EKRLASKSSSRMVMGVNSDVIYSKMENELKAVVS
Sbjct: 361 EKRLASKSSSRMVMGVNSDVIYSKMENELKAVVS 394

[Close]

BLAST of CmoCh02G016310.1 vs. ExPASy TrEMBL
Match: A0A6J1H1Y9 (uncharacterized protein LOC111459381 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111459381 PE=4 SV=1)

HSP 1 Score: 801.2 bits (2068), Expect = 1.9e-228
Identity = 394/396 (99.49%), Postives = 394/396 (99.49%), Query Frame = 0


Query: 1   MSSTPKRRTKFKHNLNSDVASKRDSYGSSSAVLLNSIKGPPRDFFPSKDDLTRLITVLFI 60
           MSSTPKRRTKFKHNLNSDVASKRDSYGSSSAVLLNSIKGPPRDFFPSKDDLTRLITVLFI
Sbjct: 1   MSSTPKRRTKFKHNLNSDVASKRDSYGSSSAVLLNSIKGPPRDFFPSKDDLTRLITVLFI 60

Query: 61  AGLVFVSCNFFVSRLETRRPRPFCDSDADSFDLLSDACEPCPSHGECHEGKLECGHGYRE 120
           AGLVFVSCNFFVSRLETRRPRPFCDSDADSFDLLSDACEPCPSHGECHEGKLECGHGYRE
Sbjct: 61  AGLVFVSCNFFVSRLETRRPRPFCDSDADSFDLLSDACEPCPSHGECHEGKLECGHGYRE 120

Query: 121 HGRLCIEDGVINKAVKKL--SEWLESHLCEANAKFLCDGIGIVWVQEDAIWDDLDGKALV 180
           HGRLCIEDGVINKAVKKL  SEWLESHLCEANAKFLCDGIGIVWVQEDAIWDDLDGKALV
Sbjct: 121 HGRLCIEDGVINKAVKKLVCSEWLESHLCEANAKFLCDGIGIVWVQEDAIWDDLDGKALV 180

Query: 181 ENIDSDNTTIMYAKSKALETIGGLFQARQNALGIKELKCPDHLAESYKPFTCRIRHWVLQ 240
           ENIDSDNTTIMYAKSKALETIGGLFQARQNALGIKELKCPDHLAESYKPFTCRIRHWVLQ
Sbjct: 181 ENIDSDNTTIMYAKSKALETIGGLFQARQNALGIKELKCPDHLAESYKPFTCRIRHWVLQ 240

Query: 241 HAFVVLPVSLLLVGCTWLLWKLCRRQYLTNRAEDLYNQVCEILEENALMSTRNSGQCESW 300
           HAFVVLPVSLLLVGCTWLLWKLCRRQYLTNRAEDLYNQVCEILEENALMSTRNSGQCESW
Sbjct: 241 HAFVVLPVSLLLVGCTWLLWKLCRRQYLTNRAEDLYNQVCEILEENALMSTRNSGQCESW 300

Query: 301 VVASRLRDHLLLPRERKDPLLWRKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSS 360
           VVASRLRDHLLLPRERKDPLLWRKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSS
Sbjct: 301 VVASRLRDHLLLPRERKDPLLWRKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSS 360

Query: 361 SKEKRLASKSSSRMVMGVNSDVIYSKMENELKAVVS 395
           SKEKRLASKSSSRMVMGVNSDVIYSKMENELKAVVS
Sbjct: 361 SKEKRLASKSSSRMVMGVNSDVIYSKMENELKAVVS 396

[Close]

BLAST of CmoCh02G016310.1 vs. ExPASy TrEMBL
Match: A0A6J1H3U4 (uncharacterized protein LOC111459381 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111459381 PE=4 SV=1)

HSP 1 Score: 795.0 bits (2052), Expect = 1.4e-226
Identity = 393/396 (99.24%), Postives = 393/396 (99.24%), Query Frame = 0


Query: 1   MSSTPKRRTKFKHNLNSDVASKRDSYGSSSAVLLNSIKGPPRDFFPSKDDLTRLITVLFI 60
           MSSTPKRRTKFKHNLNSDVASKRDSYGSSSAVLLNSIKGPPRDFFPSKDDLTRLITVLFI
Sbjct: 1   MSSTPKRRTKFKHNLNSDVASKRDSYGSSSAVLLNSIKGPPRDFFPSKDDLTRLITVLFI 60

Query: 61  AGLVFVSCNFFVSRLETRRPRPFCDSDADSFDLLSDACEPCPSHGECHEGKLECGHGYRE 120
           AGLVFVSCNFFVSRLETRRPRPFCDSDADSFDLLSDACEPCPSHGECHEGKLECGHGYRE
Sbjct: 61  AGLVFVSCNFFVSRLETRRPRPFCDSDADSFDLLSDACEPCPSHGECHEGKLECGHGYRE 120

Query: 121 HGRLCIEDGVINKAVKKL--SEWLESHLCEANAKFLCDGIGIVWVQEDAIWDDLDGKALV 180
           HGRLCIEDGVINKAVKKL  SEWLESHLCEANAKFLCDGIGIVWVQEDAIWDDLDGKALV
Sbjct: 121 HGRLCIEDGVINKAVKKLVCSEWLESHLCEANAKFLCDGIGIVWVQEDAIWDDLDGKALV 180

Query: 181 ENIDSDNTTIMYAKSKALETIGGLFQARQNALGIKELKCPDHLAESYKPFTCRIRHWVLQ 240
           ENIDSDNTTIMYAKSKALETIGGLFQARQNALGIKELKCPDHLAESYKPFTCRIRHWVLQ
Sbjct: 181 ENIDSDNTTIMYAKSKALETIGGLFQARQNALGIKELKCPDHLAESYKPFTCRIRHWVLQ 240

Query: 241 HAFVVLPVSLLLVGCTWLLWKLCRRQYLTNRAEDLYNQVCEILEENALMSTRNSGQCESW 300
           HAFVVLPVSLLLVGCTWLLWKLCRRQYLTNRAEDLYNQVCEILEENALMSTRNSGQCESW
Sbjct: 241 HAFVVLPVSLLLVGCTWLLWKLCRRQYLTNRAEDLYNQVCEILEENALMSTRNSGQCESW 300

Query: 301 VVASRLRDHLLLPRERKDPLLWRKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSS 360
           VVASRLRDHLLLPRERKDPLLWRKVEELVQEDSRIDRYPRLVKGDGKEVWEWQ EGSLSS
Sbjct: 301 VVASRLRDHLLLPRERKDPLLWRKVEELVQEDSRIDRYPRLVKGDGKEVWEWQ-EGSLSS 360

Query: 361 SKEKRLASKSSSRMVMGVNSDVIYSKMENELKAVVS 395
           SKEKRLASKSSSRMVMGVNSDVIYSKMENELKAVVS
Sbjct: 361 SKEKRLASKSSSRMVMGVNSDVIYSKMENELKAVVS 395

[Close]

BLAST of CmoCh02G016310.1 vs. ExPASy TrEMBL
Match: A0A6J1K9D6 (uncharacterized protein LOC111491297 isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111491297 PE=4 SV=1)

HSP 1 Score: 765.8 bits (1976), Expect = 9.0e-218
Identity = 378/394 (95.94%), Postives = 382/394 (96.95%), Query Frame = 0


Query: 1   MSSTPKRRTKFKHNLNSDVASKRDSYGSSSAVLLNSIKGPPRDFFPSKDDLTRLITVLFI 60
           MSSTPKRRTK+KHN NSDV  KRDSYGSSSAVLLNSIKGPPRDFFPSKDDLTRLITVLFI
Sbjct: 1   MSSTPKRRTKYKHNPNSDVTFKRDSYGSSSAVLLNSIKGPPRDFFPSKDDLTRLITVLFI 60

Query: 61  AGLVFVSCNFFVSRLETRRPRPFCDSDADSFDLLSDACEPCPSHGECHEGKLECGHGYRE 120
           AGLVFVSCNFFVSRLETRRPRPFCDSDADSFDLLSDACEPCPSHGECHEG LEC HGYRE
Sbjct: 61  AGLVFVSCNFFVSRLETRRPRPFCDSDADSFDLLSDACEPCPSHGECHEGTLECLHGYRE 120

Query: 121 HGRLCIEDGVINKAVKKLSEWLESHLCEANAKFLCDGIGIVWVQEDAIWDDLDGKALVEN 180
           HGRLCIEDGVINKAVKKLSEWLE HLCEANAKFLCDGIGIVWVQEDAIWDDLDGKALVEN
Sbjct: 121 HGRLCIEDGVINKAVKKLSEWLEFHLCEANAKFLCDGIGIVWVQEDAIWDDLDGKALVEN 180

Query: 181 IDSDNTTIMYAKSKALETIGGLFQARQNALGIKELKCPDHLAESYKPFTCRIRHWVLQHA 240
            DSDNTTIMYAKSKALETIGGLFQAR+NALGIKELKCPDHLAESYKP TCRIRHWVLQHA
Sbjct: 181 -DSDNTTIMYAKSKALETIGGLFQARKNALGIKELKCPDHLAESYKPLTCRIRHWVLQHA 240

Query: 241 FVVLPVSLLLVGCTWLLWKLCRRQYLTNRAEDLYNQVCEILEENALMSTRNSGQCESWVV 300
           F+VLPVSLLLVGCT LLWKLCRRQYLTNRAEDLYNQVCEILEENALMSTRNSGQCESWVV
Sbjct: 241 FLVLPVSLLLVGCTRLLWKLCRRQYLTNRAEDLYNQVCEILEENALMSTRNSGQCESWVV 300

Query: 301 ASRLRDHLLLPRERKDPLLWRKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSK 360
           ASRLRDHLLLPRERKDPLLWRKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSK
Sbjct: 301 ASRLRDHLLLPRERKDPLLWRKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSK 360

Query: 361 EKRLASKSSSRMVMGVNSDVIYSKMENELKAVVS 395
            KRLASKSS+RM MGVNSDVIYSKMENE KAVVS
Sbjct: 361 AKRLASKSSARMAMGVNSDVIYSKMENEPKAVVS 393

[Close]

BLAST of CmoCh02G016310.1 vs. ExPASy TrEMBL
Match: A0A6J1K380 (uncharacterized protein LOC111491297 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111491297 PE=4 SV=1)

HSP 1 Score: 760.8 bits (1963), Expect = 2.9e-216
Identity = 378/396 (95.45%), Postives = 382/396 (96.46%), Query Frame = 0


Query: 1   MSSTPKRRTKFKHNLNSDVASKRDSYGSSSAVLLNSIKGPPRDFFPSKDDLTRLITVLFI 60
           MSSTPKRRTK+KHN NSDV  KRDSYGSSSAVLLNSIKGPPRDFFPSKDDLTRLITVLFI
Sbjct: 1   MSSTPKRRTKYKHNPNSDVTFKRDSYGSSSAVLLNSIKGPPRDFFPSKDDLTRLITVLFI 60

Query: 61  AGLVFVSCNFFVSRLETRRPRPFCDSDADSFDLLSDACEPCPSHGECHEGKLECGHGYRE 120
           AGLVFVSCNFFVSRLETRRPRPFCDSDADSFDLLSDACEPCPSHGECHEG LEC HGYRE
Sbjct: 61  AGLVFVSCNFFVSRLETRRPRPFCDSDADSFDLLSDACEPCPSHGECHEGTLECLHGYRE 120

Query: 121 HGRLCIEDGVINKAVKKL--SEWLESHLCEANAKFLCDGIGIVWVQEDAIWDDLDGKALV 180
           HGRLCIEDGVINKAVKKL  SEWLE HLCEANAKFLCDGIGIVWVQEDAIWDDLDGKALV
Sbjct: 121 HGRLCIEDGVINKAVKKLVCSEWLEFHLCEANAKFLCDGIGIVWVQEDAIWDDLDGKALV 180

Query: 181 ENIDSDNTTIMYAKSKALETIGGLFQARQNALGIKELKCPDHLAESYKPFTCRIRHWVLQ 240
           EN DSDNTTIMYAKSKALETIGGLFQAR+NALGIKELKCPDHLAESYKP TCRIRHWVLQ
Sbjct: 181 EN-DSDNTTIMYAKSKALETIGGLFQARKNALGIKELKCPDHLAESYKPLTCRIRHWVLQ 240

Query: 241 HAFVVLPVSLLLVGCTWLLWKLCRRQYLTNRAEDLYNQVCEILEENALMSTRNSGQCESW 300
           HAF+VLPVSLLLVGCT LLWKLCRRQYLTNRAEDLYNQVCEILEENALMSTRNSGQCESW
Sbjct: 241 HAFLVLPVSLLLVGCTRLLWKLCRRQYLTNRAEDLYNQVCEILEENALMSTRNSGQCESW 300

Query: 301 VVASRLRDHLLLPRERKDPLLWRKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSS 360
           VVASRLRDHLLLPRERKDPLLWRKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSS
Sbjct: 301 VVASRLRDHLLLPRERKDPLLWRKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSS 360

Query: 361 SKEKRLASKSSSRMVMGVNSDVIYSKMENELKAVVS 395
           SK KRLASKSS+RM MGVNSDVIYSKMENE KAVVS
Sbjct: 361 SKAKRLASKSSARMAMGVNSDVIYSKMENEPKAVVS 395

[Close]

BLAST of CmoCh02G016310.1 vs. NCBI nr
Match: XP_022958030.1 (uncharacterized protein LOC111459381 isoform X3 [Cucurbita moschata])

HSP 1 Score: 806.2 bits (2081), Expect = 1.2e-229
Identity = 394/394 (100.00%), Postives = 394/394 (100.00%), Query Frame = 0


Query: 1   MSSTPKRRTKFKHNLNSDVASKRDSYGSSSAVLLNSIKGPPRDFFPSKDDLTRLITVLFI 60
           MSSTPKRRTKFKHNLNSDVASKRDSYGSSSAVLLNSIKGPPRDFFPSKDDLTRLITVLFI
Sbjct: 1   MSSTPKRRTKFKHNLNSDVASKRDSYGSSSAVLLNSIKGPPRDFFPSKDDLTRLITVLFI 60

Query: 61  AGLVFVSCNFFVSRLETRRPRPFCDSDADSFDLLSDACEPCPSHGECHEGKLECGHGYRE 120
           AGLVFVSCNFFVSRLETRRPRPFCDSDADSFDLLSDACEPCPSHGECHEGKLECGHGYRE
Sbjct: 61  AGLVFVSCNFFVSRLETRRPRPFCDSDADSFDLLSDACEPCPSHGECHEGKLECGHGYRE 120

Query: 121 HGRLCIEDGVINKAVKKLSEWLESHLCEANAKFLCDGIGIVWVQEDAIWDDLDGKALVEN 180
           HGRLCIEDGVINKAVKKLSEWLESHLCEANAKFLCDGIGIVWVQEDAIWDDLDGKALVEN
Sbjct: 121 HGRLCIEDGVINKAVKKLSEWLESHLCEANAKFLCDGIGIVWVQEDAIWDDLDGKALVEN 180

Query: 181 IDSDNTTIMYAKSKALETIGGLFQARQNALGIKELKCPDHLAESYKPFTCRIRHWVLQHA 240
           IDSDNTTIMYAKSKALETIGGLFQARQNALGIKELKCPDHLAESYKPFTCRIRHWVLQHA
Sbjct: 181 IDSDNTTIMYAKSKALETIGGLFQARQNALGIKELKCPDHLAESYKPFTCRIRHWVLQHA 240

Query: 241 FVVLPVSLLLVGCTWLLWKLCRRQYLTNRAEDLYNQVCEILEENALMSTRNSGQCESWVV 300
           FVVLPVSLLLVGCTWLLWKLCRRQYLTNRAEDLYNQVCEILEENALMSTRNSGQCESWVV
Sbjct: 241 FVVLPVSLLLVGCTWLLWKLCRRQYLTNRAEDLYNQVCEILEENALMSTRNSGQCESWVV 300

Query: 301 ASRLRDHLLLPRERKDPLLWRKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSK 360
           ASRLRDHLLLPRERKDPLLWRKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSK
Sbjct: 301 ASRLRDHLLLPRERKDPLLWRKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSK 360

Query: 361 EKRLASKSSSRMVMGVNSDVIYSKMENELKAVVS 395
           EKRLASKSSSRMVMGVNSDVIYSKMENELKAVVS
Sbjct: 361 EKRLASKSSSRMVMGVNSDVIYSKMENELKAVVS 394

[Close]

BLAST of CmoCh02G016310.1 vs. NCBI nr
Match: KAG6606225.1 (hypothetical protein SDJN03_03542, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 804.7 bits (2077), Expect = 3.6e-229
Identity = 393/394 (99.75%), Postives = 393/394 (99.75%), Query Frame = 0


Query: 1   MSSTPKRRTKFKHNLNSDVASKRDSYGSSSAVLLNSIKGPPRDFFPSKDDLTRLITVLFI 60
           MSSTPKRRTKFKHNLNSDVASKRDSYGSSSAVLLNSIKGPPRDFFPSKDDLTRLITVLFI
Sbjct: 1   MSSTPKRRTKFKHNLNSDVASKRDSYGSSSAVLLNSIKGPPRDFFPSKDDLTRLITVLFI 60

Query: 61  AGLVFVSCNFFVSRLETRRPRPFCDSDADSFDLLSDACEPCPSHGECHEGKLECGHGYRE 120
           AGLVFVSCNFFVSRLETRRPRPFCDSDADSFDLLSDACEPCPSHGECHEGKLECGHGYRE
Sbjct: 61  AGLVFVSCNFFVSRLETRRPRPFCDSDADSFDLLSDACEPCPSHGECHEGKLECGHGYRE 120

Query: 121 HGRLCIEDGVINKAVKKLSEWLESHLCEANAKFLCDGIGIVWVQEDAIWDDLDGKALVEN 180
           HGRLCIEDGVINKAVKKLSEWLESHLCEANAKFLCDGIGIVWVQEDAIWDDLDGKALVEN
Sbjct: 121 HGRLCIEDGVINKAVKKLSEWLESHLCEANAKFLCDGIGIVWVQEDAIWDDLDGKALVEN 180

Query: 181 IDSDNTTIMYAKSKALETIGGLFQARQNALGIKELKCPDHLAESYKPFTCRIRHWVLQHA 240
           IDSDNTTIMYAKSKALETIGGLFQARQNALGIKELKCPDHLAESYKPFTCRIRHWVLQHA
Sbjct: 181 IDSDNTTIMYAKSKALETIGGLFQARQNALGIKELKCPDHLAESYKPFTCRIRHWVLQHA 240

Query: 241 FVVLPVSLLLVGCTWLLWKLCRRQYLTNRAEDLYNQVCEILEENALMSTRNSGQCESWVV 300
           FVVLPVSLLLVGCTWLLWKLCRRQYLTNRAEDLYNQVCEILEENALMSTRNSGQCESWVV
Sbjct: 241 FVVLPVSLLLVGCTWLLWKLCRRQYLTNRAEDLYNQVCEILEENALMSTRNSGQCESWVV 300

Query: 301 ASRLRDHLLLPRERKDPLLWRKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSK 360
           ASRLRDHLLLPRERKDPLLWRKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSK
Sbjct: 301 ASRLRDHLLLPRERKDPLLWRKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSK 360

Query: 361 EKRLASKSSSRMVMGVNSDVIYSKMENELKAVVS 395
           EKRLASKSSSRM MGVNSDVIYSKMENELKAVVS
Sbjct: 361 EKRLASKSSSRMAMGVNSDVIYSKMENELKAVVS 394

[Close]

BLAST of CmoCh02G016310.1 vs. NCBI nr
Match: XP_022958028.1 (uncharacterized protein LOC111459381 isoform X1 [Cucurbita moschata])

HSP 1 Score: 801.2 bits (2068), Expect = 4.0e-228
Identity = 394/396 (99.49%), Postives = 394/396 (99.49%), Query Frame = 0


Query: 1   MSSTPKRRTKFKHNLNSDVASKRDSYGSSSAVLLNSIKGPPRDFFPSKDDLTRLITVLFI 60
           MSSTPKRRTKFKHNLNSDVASKRDSYGSSSAVLLNSIKGPPRDFFPSKDDLTRLITVLFI
Sbjct: 1   MSSTPKRRTKFKHNLNSDVASKRDSYGSSSAVLLNSIKGPPRDFFPSKDDLTRLITVLFI 60

Query: 61  AGLVFVSCNFFVSRLETRRPRPFCDSDADSFDLLSDACEPCPSHGECHEGKLECGHGYRE 120
           AGLVFVSCNFFVSRLETRRPRPFCDSDADSFDLLSDACEPCPSHGECHEGKLECGHGYRE
Sbjct: 61  AGLVFVSCNFFVSRLETRRPRPFCDSDADSFDLLSDACEPCPSHGECHEGKLECGHGYRE 120

Query: 121 HGRLCIEDGVINKAVKKL--SEWLESHLCEANAKFLCDGIGIVWVQEDAIWDDLDGKALV 180
           HGRLCIEDGVINKAVKKL  SEWLESHLCEANAKFLCDGIGIVWVQEDAIWDDLDGKALV
Sbjct: 121 HGRLCIEDGVINKAVKKLVCSEWLESHLCEANAKFLCDGIGIVWVQEDAIWDDLDGKALV 180

Query: 181 ENIDSDNTTIMYAKSKALETIGGLFQARQNALGIKELKCPDHLAESYKPFTCRIRHWVLQ 240
           ENIDSDNTTIMYAKSKALETIGGLFQARQNALGIKELKCPDHLAESYKPFTCRIRHWVLQ
Sbjct: 181 ENIDSDNTTIMYAKSKALETIGGLFQARQNALGIKELKCPDHLAESYKPFTCRIRHWVLQ 240

Query: 241 HAFVVLPVSLLLVGCTWLLWKLCRRQYLTNRAEDLYNQVCEILEENALMSTRNSGQCESW 300
           HAFVVLPVSLLLVGCTWLLWKLCRRQYLTNRAEDLYNQVCEILEENALMSTRNSGQCESW
Sbjct: 241 HAFVVLPVSLLLVGCTWLLWKLCRRQYLTNRAEDLYNQVCEILEENALMSTRNSGQCESW 300

Query: 301 VVASRLRDHLLLPRERKDPLLWRKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSS 360
           VVASRLRDHLLLPRERKDPLLWRKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSS
Sbjct: 301 VVASRLRDHLLLPRERKDPLLWRKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSS 360

Query: 361 SKEKRLASKSSSRMVMGVNSDVIYSKMENELKAVVS 395
           SKEKRLASKSSSRMVMGVNSDVIYSKMENELKAVVS
Sbjct: 361 SKEKRLASKSSSRMVMGVNSDVIYSKMENELKAVVS 396

[Close]

BLAST of CmoCh02G016310.1 vs. NCBI nr
Match: XP_023533382.1 (uncharacterized protein LOC111795284 isoform X3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 797.3 bits (2058), Expect = 5.8e-227
Identity = 391/396 (98.74%), Postives = 392/396 (98.99%), Query Frame = 0


Query: 1   MSSTPKRRTKFKHNLNSDVASKRDSYGSSSAVLLNSIKGPPRDFFPSKDDLTRLITVLFI 60
           MSSTPKRRTKFKHNLNSDVASKRDSYGSSSAVLLNS+KGPPRDFFPSKDDLTRLITVLFI
Sbjct: 1   MSSTPKRRTKFKHNLNSDVASKRDSYGSSSAVLLNSVKGPPRDFFPSKDDLTRLITVLFI 60

Query: 61  AGLVFVSCNFFVSRLETRRPRPFCDSDADSFDLLSDACEPCPSHGECHEGKLECGHGYRE 120
           AGLVFVSCNFFVSRLETRRPRPFCDSDADSFDLLSDACEPCPSHGECHEGKLECGHGYRE
Sbjct: 61  AGLVFVSCNFFVSRLETRRPRPFCDSDADSFDLLSDACEPCPSHGECHEGKLECGHGYRE 120

Query: 121 HGRLCIEDGVINKAVKKL--SEWLESHLCEANAKFLCDGIGIVWVQEDAIWDDLDGKALV 180
           HGRLCIEDGVINKAVKKL  SEWLESHLCEANAKFLCDGIGIVWVQEDAIWDDLDGKALV
Sbjct: 121 HGRLCIEDGVINKAVKKLVCSEWLESHLCEANAKFLCDGIGIVWVQEDAIWDDLDGKALV 180

Query: 181 ENIDSDNTTIMYAKSKALETIGGLFQARQNALGIKELKCPDHLAESYKPFTCRIRHWVLQ 240
           ENIDSDNTTIMYAKSKALETIGGLFQARQNALGIKELKCPDHLAESYKPFTCRIRHWVLQ
Sbjct: 181 ENIDSDNTTIMYAKSKALETIGGLFQARQNALGIKELKCPDHLAESYKPFTCRIRHWVLQ 240

Query: 241 HAFVVLPVSLLLVGCTWLLWKLCRRQYLTNRAEDLYNQVCEILEENALMSTRNSGQCESW 300
           HAFVVLPVSLLLVGCTWLLWKLCRRQYLTNRAEDLYNQVCEILEENALMSTRNSGQCESW
Sbjct: 241 HAFVVLPVSLLLVGCTWLLWKLCRRQYLTNRAEDLYNQVCEILEENALMSTRNSGQCESW 300

Query: 301 VVASRLRDHLLLPRERKDPLLWRKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSS 360
           VVASRLRDHLLLPRERKDPLLWRKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSS
Sbjct: 301 VVASRLRDHLLLPRERKDPLLWRKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSS 360

Query: 361 SKEKRLASKSSSRMVMGVNSDVIYSKMENELKAVVS 395
           SKEKRLASKSSSRM MGVNSDVIYSKMENEL AVVS
Sbjct: 361 SKEKRLASKSSSRMAMGVNSDVIYSKMENELNAVVS 396

[Close]

BLAST of CmoCh02G016310.1 vs. NCBI nr
Match: KAG7036172.1 (hypothetical protein SDJN02_02973 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 796.2 bits (2055), Expect = 1.3e-226
Identity = 386/393 (98.22%), Postives = 390/393 (99.24%), Query Frame = 0


Query: 1   MSSTPKRRTKFKHNLNSDVASKRDSYGSSSAVLLNSIKGPPRDFFPSKDDLTRLITVLFI 60
           MSSTPKRRTKFKHNLNSDVASKRDSYGSSSAVLLNSIKGPPRDFFPSKDDLTRL+TVLFI
Sbjct: 1   MSSTPKRRTKFKHNLNSDVASKRDSYGSSSAVLLNSIKGPPRDFFPSKDDLTRLVTVLFI 60

Query: 61  AGLVFVSCNFFVSRLETRRPRPFCDSDADSFDLLSDACEPCPSHGECHEGKLECGHGYRE 120
           AGLVFVSCNFFVSRLETRRPRPFCDSDADSFDLLSDACEPCPSHGECHEGKLECGHGYRE
Sbjct: 61  AGLVFVSCNFFVSRLETRRPRPFCDSDADSFDLLSDACEPCPSHGECHEGKLECGHGYRE 120

Query: 121 HGRLCIEDGVINKAVKKLSEWLESHLCEANAKFLCDGIGIVWVQEDAIWDDLDGKALVEN 180
           HGRLCIEDGVINKAVKKLSEWLESHLCEANAKFLCDGIGIVWVQEDAIWDDLDGKALVEN
Sbjct: 121 HGRLCIEDGVINKAVKKLSEWLESHLCEANAKFLCDGIGIVWVQEDAIWDDLDGKALVEN 180

Query: 181 IDSDNTTIMYAKSKALETIGGLFQARQNALGIKELKCPDHLAESYKPFTCRIRHWVLQHA 240
           IDSDNTTIMYAKSKALETIGGLFQARQNALGIKELKCPDHLAESYKPFTCRIRHWVLQHA
Sbjct: 181 IDSDNTTIMYAKSKALETIGGLFQARQNALGIKELKCPDHLAESYKPFTCRIRHWVLQHA 240

Query: 241 FVVLPVSLLLVGCTWLLWKLCRRQYLTNRAEDLYNQVCEILEENALMSTRNSGQCESWVV 300
           FVVLPVSLLLVGCTWLLWKLCRRQYLTNRAEDLYNQVCEILEENALMSTRNSGQCESWVV
Sbjct: 241 FVVLPVSLLLVGCTWLLWKLCRRQYLTNRAEDLYNQVCEILEENALMSTRNSGQCESWVV 300

Query: 301 ASRLRDHLLLPRERKDPLLWRKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSK 360
           ASRLRDHLLLPRERKDPLLWRKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSK
Sbjct: 301 ASRLRDHLLLPRERKDPLLWRKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSK 360

Query: 361 EKRLASKSSSRMVMGVNSDVIYSKMENELKAVV 394
           EKRLASKSSSRM MGVNSDVIYSKMEN+ +A +
Sbjct: 361 EKRLASKSSSRMAMGVNSDVIYSKMENDAEATI 393

[Close]

BLAST of CmoCh02G016310.1 vs. TAIR 10
Match: AT5G46560.1 (CONTAINS InterPro DOMAIN/s: Inner nuclear membrane protein MAN1 (InterPro:IPR018996); Has 58 Blast hits to 58 proteins in 29 species: Archae - 0; Bacteria - 4; Metazoa - 11; Fungi - 15; Plants - 20; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). )

HSP 1 Score: 337.4 bits (864), Expect = 1.5e-92
Identity = 166/364 (45.60%), Postives = 234/364 (64.29%), Query Frame = 0


Query: 1   MSSTPKRRTKFKHNLNSDVASKRDSYGSSSAVLLNSIKGPPRDFFPSKDDLTRLITVLFI 60
           M S P++R K      S+  + R    SSS+  + S+  PP+  FPSK +   L+ VL +
Sbjct: 1   MDSIPRKRPK------SETRTGRTPKSSSSSSPIRSMLEPPQSLFPSKGEFFTLLKVLLV 60

Query: 61  AGLVFVSCNFFVSRLETRRPRPFCDSDADSFDLLSDACEPCPSHGECHEGKLECGHGYRE 120
           A  V  +CNF    L +   + FCDS+ +  D   D CEPCP +GEC++GKL+C  GY+ 
Sbjct: 61  ACAVAFTCNFLSKSLSSNPSKSFCDSNFNPIDSDLDICEPCPINGECYQGKLQCNLGYKN 120

Query: 121 HGRLCIEDGVINKAVKKLSEWLESHLCEANAKFLCDGIGIVWVQEDAIWDDLDGKALVEN 180
              LC+EDG IN++ KKL  + E  +CE+ A   C G G +WV E+ +W +L   + + N
Sbjct: 121 QRNLCVEDGEINESTKKLVGYFERKVCESYAHNECYGTGTIWVPENDVWTELRSNSFLSN 180

Query: 181 IDSDNTTIMYAKSKALETIGGLFQARQNALGIKELKCPDHLAESYKPFTCRIRHWVLQHA 240
           +  D +   + K KA+E +  L + R N+ GI ELKCP+ +A+SYKP TCR+  W+L+H 
Sbjct: 181 L--DESAYNFLKGKAVEGVTELLEKRTNSNGIDELKCPESVAKSYKPLTCRLHQWILRHI 240

Query: 241 FVVLPVSLLLVGCTWLLWKLCRRQYLTNRAEDLYNQVCEILEENALMS-TRNSGQCESWV 300
            ++     +LVG   L  ++ R+Q  + R E+LY+QVC+ LEENA+ S +  +  CE WV
Sbjct: 241 LIISSSCAMLVGSAMLRRRIQRKQCFSRRVEELYDQVCDFLEENAVASNSAETSNCEPWV 300

Query: 301 VASRLRDHLLLPRERKDPLLWRKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSS 360
           +AS LRD+LLLPRER+DPLLW KVEEL++EDSRIDRY +L+KG+ K VWEWQVEGSLS S
Sbjct: 301 IASWLRDYLLLPRERRDPLLWTKVEELIKEDSRIDRYEKLLKGEKKVVWEWQVEGSLSLS 356

Query: 361 KEKR 364
           K K+
Sbjct: 361 KLKK 356

The following BLAST results are available for this feature:

BLAST of CmoCh02G016310.1 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh02G016310.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H2A7	6.0e-230	100.00	uncharacterized protein LOC111459381 isoform X3 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1H1Y9	1.9e-228	99.49	uncharacterized protein LOC111459381 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1H3U4	1.4e-226	99.24	uncharacterized protein LOC111459381 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1K9D6	9.0e-218	95.94	uncharacterized protein LOC111491297 isoform X3 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1K380	2.9e-216	95.45	uncharacterized protein LOC111491297 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of CmoCh02G016310.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022958030.1	1.2e-229	100.00	uncharacterized protein LOC111459381 isoform X3 [Cucurbita moschata]	[more]
KAG6606225.1	3.6e-229	99.75	hypothetical protein SDJN03_03542, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022958028.1	4.0e-228	99.49	uncharacterized protein LOC111459381 isoform X1 [Cucurbita moschata]	[more]
XP_023533382.1	5.8e-227	98.74	uncharacterized protein LOC111795284 isoform X3 [Cucurbita pepo subsp. pepo]	[more]
KAG7036172.1	1.3e-226	98.22	hypothetical protein SDJN02_02973 [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of CmoCh02G016310.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G46560.1	1.5e-92	45.60	CONTAINS InterPro DOMAIN/s: Inner nuclear membrane protein MAN1 (InterPro:IPR018...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018996	Man1/Src1, C-terminal	PFAM	PF09402	MSC	coord: 94..350 e-value: 6.7E-14 score: 52.1
IPR041885	MAN1, winged-helix domain	GENE3D	1.10.10.1180		coord: 256..350 e-value: 2.2E-12 score: 49.1
IPR044780	Heh2/Src1-like	PANTHER	PTHR47808	INNER NUCLEAR MEMBRANE PROTEIN HEH2-RELATED	coord: 48..370

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmoCh02G016310	CmoCh02G016310	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh02G016310.1:exon:8368	CmoCh02G016310.1:exon:8368	exon
CmoCh02G016310.1:exon:8369	CmoCh02G016310.1:exon:8369	exon
CmoCh02G016310.1:exon:8370	CmoCh02G016310.1:exon:8370	exon
CmoCh02G016310.1:exon:8371	CmoCh02G016310.1:exon:8371	exon
CmoCh02G016310.1:exon:8372	CmoCh02G016310.1:exon:8372	exon
CmoCh02G016310.1:exon:8373	CmoCh02G016310.1:exon:8373	exon
CmoCh02G016310.1:exon:8374	CmoCh02G016310.1:exon:8374	exon
CmoCh02G016310.1:exon:8375	CmoCh02G016310.1:exon:8375	exon
CmoCh02G016310.1:exon:8376	CmoCh02G016310.1:exon:8376	exon
CmoCh02G016310.1:exon:8377	CmoCh02G016310.1:exon:8377	exon
CmoCh02G016310.1:exon:8378	CmoCh02G016310.1:exon:8378	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh02G016310.1:five_prime_utr	CmoCh02G016310.1:five_prime_utr	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh02G016310.1:cds	CmoCh02G016310.1:cds	CDS
CmoCh02G016310.1:cds	CmoCh02G016310.1:cds_2	CDS
CmoCh02G016310.1:cds	CmoCh02G016310.1:cds_3	CDS
CmoCh02G016310.1:cds	CmoCh02G016310.1:cds_4	CDS
CmoCh02G016310.1:cds	CmoCh02G016310.1:cds_5	CDS
CmoCh02G016310.1:cds	CmoCh02G016310.1:cds_6	CDS
CmoCh02G016310.1:cds	CmoCh02G016310.1:cds_7	CDS
CmoCh02G016310.1:cds	CmoCh02G016310.1:cds_8	CDS
CmoCh02G016310.1:cds	CmoCh02G016310.1:cds_9	CDS
CmoCh02G016310.1:cds	CmoCh02G016310.1:cds_10	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh02G016310.1:three_prime_utr	CmoCh02G016310.1:three_prime_utr	three_prime_UTR
CmoCh02G016310.1:three_prime_utr	CmoCh02G016310.1:three_prime_utr_2	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmoCh02G016310.1	CmoCh02G016310.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005637	nuclear inner membrane
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003682	chromatin binding