CmoCh02G005200.1 (mRNA) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh02G005200.1
Type	mRNA
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	homeobox protein 6
Location	Cmo_Chr02: 2914491 .. 2916262 (+)
Sequence length	1012
RNA-Seq Expression	CmoCh02G005200.1
Synteny	CmoCh02G005200.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTTGCTTTGTCACTTTATATAATATGAATCTCAATCTCTTCCTCTTCTTCTTCTTCTTTTCCATCAATACATAGCAATAAAAATTTCAACTCAGATTGGGAAGAGCTGATGGCAACAACCATCCATGGCGAAGAACACGATAAACAAGACGAAGACGAAGAAGAAGCGTTATCTTTGTGCGACCTTCCCGTCAAAGAAAAGCAGCAGCCTTCGCTTCTAAATGAAAACCCCATCACGGAGGATTTCGATTTCAACCACTGGCCACCGCCGCCGTCGCCGCCGCCCATGTGCGCTGCCGACGACATCTTCTTTCAAGGCCATTTGCTCCCTCTTCGCCTCTCTGTTAGCTCTGATAATACTCACAATCACTTCTTTTCTAAACCTCTGTCCGCCAGGTTCGAACCCAGCCACAATTGTTCATACATTTAATTTTTTTTTTTTAATTTCTTAATTTATTTAATTTTTCCAGGTCGGAGTCTATGGATCATAATATGTTGAGGTTTAGAAATGGAAGCAGTAGTAGCAGTAGCAATAGCAGTAGAAGTCATTATTCCAGGTATGCTTTTTTAATTTCTCCCCATTTCAATTAATTATTTTATTTCAAACTTGGATATTTTTAAAATTATAATCTCCAAAATCCAACTCAAATTCAAACATCAAAATATATTACCGTTACACAAAATAAAAGGTTAAATTAATAATAATAAAATAAAATAAACTTTCCCAAAAAAAAATATATTGTTTTAACTTTAAAAGTTTTAATAATCTTTTAATTTTATAAAAATTGAATTTAGCAAAGTTTTATTAATATTTTTAATTTTTTTAAAAATATTTTACCCATTAACACTAATACCGTTAAAGATATTGTCCTTAGGTTTTCCCTATTTTAAAATGGCCCGATCTTAAAAGTTTGTTTTGTTCTCTTCTCCAACTAATAGATAATATTATTTTTATAAATTTATAGATATTTTTTTTTTAAATGTTAAAAATATTAATAAAAATTATATTTGAAATAAAATAATCACGGTTGGAGGATGGAAGTCCACACTAATTTAGGAAATGATCGATAAGTTAGGAATATTACCTCTATTGGTAGAGGCCAACTCTTGGGTAAGCCCAAACCAAAGCCACGAGAGCTTATGTTCAAAGAGGACATGATTGTGGAGAGTTGTGTTCATCTAATAATCACGATCTAGTTATATATTTTTAAAAAAATAATTGATGAAATATTTTGAATTGCAGGTGTTCAAGTATTAGTAACAATTCCATTTCAATTCCGACGAACTCAAAGCCAAGAACTCAAAACAACGTCTTCCACTCTCACCCAAGTCCCACGCCCCAAATCAGATCCTTTTCGACTTTCGGCCGCCGGAGCCGGAGCCGGAGCTCCTCCCGCTGGGACTTTTTCCGGGTGGGTCTTCTCCGAACGCCAGGGATGGAACTTCACGACCTCAAAACTCGCACCACCGTCAGCAACGCGGTACCCACGGTGGGGCAGAAAACAACCGCCTCGTTTTTGGGTGTGGTGAGCTGCAAAAAATCAGTGGAGACAATACCGGCGGCGAAGAAGATAAAGAATTGGAGTGGGAATATTGGGAAGAAAAGGAATGAAAAGGGAAAGGGAATTGGGATTAGGGAGAAGGAATTGAATGATAATGTTGAAATTAGGGAAAAGGAAAAGGAAAAGGCGACGAGGCTGTCACATCGTCGAACATTTGAATGGCTAAAGCAGCTCTCGCATGCAACCTTTGCTGACCAACAATCATCTTGA

mRNA sequence

CTTTGCTTTGTCACTTTATATAATATGAATCTCAATCTCTTCCTCTTCTTCTTCTTCTTTTCCATCAATACATAGCAATAAAAATTTCAACTCAGATTGGGAAGAGCTGATGGCAACAACCATCCATGGCGAAGAACACGATAAACAAGACGAAGACGAAGAAGAAGCGTTATCTTTGTGCGACCTTCCCGTCAAAGAAAAGCAGCAGCCTTCGCTTCTAAATGAAAACCCCATCACGGAGGATTTCGATTTCAACCACTGGCCACCGCCGCCGTCGCCGCCGCCCATGTGCGCTGCCGACGACATCTTCTTTCAAGGCCATTTGCTCCCTCTTCGCCTCTCTGTTAGCTCTGATAATACTCACAATCACTTCTTTTCTAAACCTCTGTCCGCCAGGTCGGAGTCTATGGATCATAATATGTTGAGGTTTAGAAATGGAAGCAGTAGTAGCAGTAGCAATAGCAGTAGAAGTCATTATTCCAGGTGTTCAAGTATTAGTAACAATTCCATTTCAATTCCGACGAACTCAAAGCCAAGAACTCAAAACAACGTCTTCCACTCTCACCCAAGTCCCACGCCCCAAATCAGATCCTTTTCGACTTTCGGCCGCCGGAGCCGGAGCCGGAGCTCCTCCCGCTGGGACTTTTTCCGGGTGGGTCTTCTCCGAACGCCAGGGATGGAACTTCACGACCTCAAAACTCGCACCACCGTCAGCAACGCGGTACCCACGGTGGGGCAGAAAACAACCGCCTCGTTTTTGGGTGTGGTGAGCTGCAAAAAATCAGTGGAGACAATACCGGCGGCGAAGAAGATAAAGAATTGGAGTGGGAATATTGGGAAGAAAAGGAATGAAAAGGGAAAGGGAATTGGGATTAGGGAGAAGGAATTGAATGATAATGTTGAAATTAGGGAAAAGGAAAAGGAAAAGGCGACGAGGCTGTCACATCGTCGAACATTTGAATGGCTAAAGCAGCTCTCGCATGCAACCTTTGCTGACCAACAATCATCTTGA

Coding sequence (CDS)

ATGGCAACAACCATCCATGGCGAAGAACACGATAAACAAGACGAAGACGAAGAAGAAGCGTTATCTTTGTGCGACCTTCCCGTCAAAGAAAAGCAGCAGCCTTCGCTTCTAAATGAAAACCCCATCACGGAGGATTTCGATTTCAACCACTGGCCACCGCCGCCGTCGCCGCCGCCCATGTGCGCTGCCGACGACATCTTCTTTCAAGGCCATTTGCTCCCTCTTCGCCTCTCTGTTAGCTCTGATAATACTCACAATCACTTCTTTTCTAAACCTCTGTCCGCCAGGTCGGAGTCTATGGATCATAATATGTTGAGGTTTAGAAATGGAAGCAGTAGTAGCAGTAGCAATAGCAGTAGAAGTCATTATTCCAGGTGTTCAAGTATTAGTAACAATTCCATTTCAATTCCGACGAACTCAAAGCCAAGAACTCAAAACAACGTCTTCCACTCTCACCCAAGTCCCACGCCCCAAATCAGATCCTTTTCGACTTTCGGCCGCCGGAGCCGGAGCCGGAGCTCCTCCCGCTGGGACTTTTTCCGGGTGGGTCTTCTCCGAACGCCAGGGATGGAACTTCACGACCTCAAAACTCGCACCACCGTCAGCAACGCGGTACCCACGGTGGGGCAGAAAACAACCGCCTCGTTTTTGGGTGTGGTGAGCTGCAAAAAATCAGTGGAGACAATACCGGCGGCGAAGAAGATAAAGAATTGGAGTGGGAATATTGGGAAGAAAAGGAATGAAAAGGGAAAGGGAATTGGGATTAGGGAGAAGGAATTGAATGATAATGTTGAAATTAGGGAAAAGGAAAAGGAAAAGGCGACGAGGCTGTCACATCGTCGAACATTTGAATGGCTAAAGCAGCTCTCGCATGCAACCTTTGCTGACCAACAATCATCTTGA

Protein sequence

MATTIHGEEHDKQDEDEEEALSLCDLPVKEKQQPSLLNENPITEDFDFNHWPPPPSPPPMCAADDIFFQGHLLPLRLSVSSDNTHNHFFSKPLSARSESMDHNMLRFRNGSSSSSSNSSRSHYSRCSSISNNSISIPTNSKPRTQNNVFHSHPSPTPQIRSFSTFGRRSRSRSSSRWDFFRVGLLRTPGMELHDLKTRTTVSNAVPTVGQKTTASFLGVVSCKKSVETIPAAKKIKNWSGNIGKKRNEKGKGIGIREKELNDNVEIREKEKEKATRLSHRRTFEWLKQLSHATFADQQSS

Homology

[Close]

BLAST of CmoCh02G005200.1 vs. ExPASy TrEMBL
Match: A0A6J1G7B7 (uncharacterized protein LOC111451408 OS=Cucurbita moschata OX=3662 GN=LOC111451408 PE=4 SV=1)

HSP 1 Score: 583.2 bits (1502), Expect = 6.3e-163
Identity = 300/300 (100.00%), Postives = 300/300 (100.00%), Query Frame = 0


Query: 1   MATTIHGEEHDKQDEDEEEALSLCDLPVKEKQQPSLLNENPITEDFDFNHWPPPPSPPPM 60
           MATTIHGEEHDKQDEDEEEALSLCDLPVKEKQQPSLLNENPITEDFDFNHWPPPPSPPPM
Sbjct: 1   MATTIHGEEHDKQDEDEEEALSLCDLPVKEKQQPSLLNENPITEDFDFNHWPPPPSPPPM 60

Query: 61  CAADDIFFQGHLLPLRLSVSSDNTHNHFFSKPLSARSESMDHNMLRFRNGSSSSSSNSSR 120
           CAADDIFFQGHLLPLRLSVSSDNTHNHFFSKPLSARSESMDHNMLRFRNGSSSSSSNSSR
Sbjct: 61  CAADDIFFQGHLLPLRLSVSSDNTHNHFFSKPLSARSESMDHNMLRFRNGSSSSSSNSSR 120

Query: 121 SHYSRCSSISNNSISIPTNSKPRTQNNVFHSHPSPTPQIRSFSTFGRRSRSRSSSRWDFF 180
           SHYSRCSSISNNSISIPTNSKPRTQNNVFHSHPSPTPQIRSFSTFGRRSRSRSSSRWDFF
Sbjct: 121 SHYSRCSSISNNSISIPTNSKPRTQNNVFHSHPSPTPQIRSFSTFGRRSRSRSSSRWDFF 180

Query: 181 RVGLLRTPGMELHDLKTRTTVSNAVPTVGQKTTASFLGVVSCKKSVETIPAAKKIKNWSG 240
           RVGLLRTPGMELHDLKTRTTVSNAVPTVGQKTTASFLGVVSCKKSVETIPAAKKIKNWSG
Sbjct: 181 RVGLLRTPGMELHDLKTRTTVSNAVPTVGQKTTASFLGVVSCKKSVETIPAAKKIKNWSG 240

Query: 241 NIGKKRNEKGKGIGIREKELNDNVEIREKEKEKATRLSHRRTFEWLKQLSHATFADQQSS 300
           NIGKKRNEKGKGIGIREKELNDNVEIREKEKEKATRLSHRRTFEWLKQLSHATFADQQSS
Sbjct: 241 NIGKKRNEKGKGIGIREKELNDNVEIREKEKEKATRLSHRRTFEWLKQLSHATFADQQSS 300

[Close]

BLAST of CmoCh02G005200.1 vs. ExPASy TrEMBL
Match: A0A6J1KZ54 (uncharacterized protein LOC111499574 OS=Cucurbita maxima OX=3661 GN=LOC111499574 PE=4 SV=1)

HSP 1 Score: 507.7 bits (1306), Expect = 3.4e-140
Identity = 274/309 (88.67%), Postives = 280/309 (90.61%), Query Frame = 0


Query: 1   MATTIHGEEHDKQD------EDEEEALSLCDLPVKEKQQPSLLNENPITEDFDFNHWPPP 60
           MATTIHG+EHD QD      E+EEEALS+CDLPVKEKQQP LL+ENPITEDFDFNHWP  
Sbjct: 1   MATTIHGDEHDNQDEEDEEEEEEEEALSMCDLPVKEKQQPLLLDENPITEDFDFNHWP-- 60

Query: 61  PSPPPMCAADDIFFQGHLLPLRLSVSSDNTHNHFFSKPLSARSESMDHNMLRFRNGSSSS 120
             PPPMCAADDIFFQGHLLPLRLSVSSDNTHNHFFSKPLSARSESMDHNMLRFRNG SSS
Sbjct: 61  --PPPMCAADDIFFQGHLLPLRLSVSSDNTHNHFFSKPLSARSESMDHNMLRFRNG-SSS 120

Query: 121 SSNSSRSHYSRCSSISNNSISIPTNSKPRTQNNVFHSHPSPTPQIRSFSTFGRRSRSRSS 180
           SSNSSRSHYSRCSSISNNSISIPTNSKPRTQNNVFHSHPSPTPQIRSFSTFGR    RSS
Sbjct: 121 SSNSSRSHYSRCSSISNNSISIPTNSKPRTQNNVFHSHPSPTPQIRSFSTFGR----RSS 180

Query: 181 SRWDFFRVGLLRTPGMELHDLKTRTT---VSNAVPTVGQKTTASFLGVVSCKKSVETIPA 240
           SRWDFFRVGLLRTPGMELHDLKTRTT      A PTVGQKT  +FLGVVSCKKSV+TIPA
Sbjct: 181 SRWDFFRVGLLRTPGMELHDLKTRTTNGAAFEAEPTVGQKTRGTFLGVVSCKKSVDTIPA 240

Query: 241 AKKIKNWSGNIGKKRNEKGKGIGIREKELNDNVEIREKEKEKATRLSHRRTFEWLKQLSH 300
           AKKIKNWSGNI KKRNEKGKGIGIRE ELNDNVEIREKEKEKATRLSHRRTFEWLKQLSH
Sbjct: 241 AKKIKNWSGNIVKKRNEKGKGIGIRENELNDNVEIREKEKEKATRLSHRRTFEWLKQLSH 300

[Close]

BLAST of CmoCh02G005200.1 vs. ExPASy TrEMBL
Match: A0A0A0LPT6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G277620 PE=4 SV=1)

HSP 1 Score: 319.7 bits (818), Expect = 1.3e-83
Identity = 195/300 (65.00%), Postives = 225/300 (75.00%), Query Frame = 0


Query: 8   EEHDKQDEDEEEALSLCDLPVKEKQQPSLLNENPITE---DFDFNHWPPPPSPPPMCAAD 67
           ++ D+++E+EEEALSLCDLPVKEKQQP+      + E   DFDFNHW PPPS  PM  AD
Sbjct: 27  DDDDEEEEEEEEALSLCDLPVKEKQQPTRSVSTTVVETDQDFDFNHWRPPPS--PMLTAD 86

Query: 68  DIFFQGHLLPLRLSVSSDNTHNHFFSKPLSARSESMD-HNMLRFRNGSSSSSSNSSRSHY 127
           D+FFQGH+LPLRLS SS+N+ N+  +  L  RSESMD +NMLRFRN S+SSS  SSRSHY
Sbjct: 87  DLFFQGHMLPLRLSFSSENSQNN--NGNLWCRSESMDGNNMLRFRNESTSSS--SSRSHY 146

Query: 128 SRCSSISNNSISIPTNSKPR-TQNNVFHSHPSPTPQIRSFSTFGRRSRSRSSSRWDFFRV 187
           SR SS+SNNSISIPTNSKPR + NNVFHSHPSPTPQIRSFST     RSRSSSRW+FFR+
Sbjct: 147 SRSSSLSNNSISIPTNSKPRPSNNNVFHSHPSPTPQIRSFSTSSH--RSRSSSRWEFFRL 206

Query: 188 GLLRTPGMELHDLKTRTTVSNAVPT---VGQKTTASFLGVVSCKKSVETIPAAKKIKNWS 247
           GLLRTPGMELHDLKTRTT +    T      KTTAS LGVVSCK+SVET+P     KN  
Sbjct: 207 GLLRTPGMELHDLKTRTTTTTTTTTTTSTAHKTTASILGVVSCKRSVETVPTTTGSKN-- 266

Query: 248 GNIGKKRNEKGKGIGIREKELNDN-VEIREKEKEKATRLSHRRTFEWLKQLSHATFADQQ 299
                 R  +   +   +K  +DN VEIREKEKEK  R+SHRRTFEWLKQLSHATF ++Q
Sbjct: 267 ------RIRRENVLENNKKNNDDNKVEIREKEKEKERRVSHRRTFEWLKQLSHATFGEEQ 310

[Close]

BLAST of CmoCh02G005200.1 vs. ExPASy TrEMBL
Match: A0A6J1JCH9 (probable membrane-associated kinase regulator 1 OS=Cucurbita maxima OX=3661 GN=LOC111483795 PE=4 SV=1)

HSP 1 Score: 318.5 bits (815), Expect = 2.9e-83
Identity = 198/313 (63.26%), Postives = 226/313 (72.20%), Query Frame = 0


Query: 1   MATTIHG-----EEHDKQDEDEEEALSLCDLPVKEKQQPSLLNENPI-------TEDFDF 60
           M  + HG     E++  Q++++EEALS CDLP+KE Q P  LNE PI       +EDFDF
Sbjct: 1   MGRSCHGDETWEEQNQIQEQEDEEALSFCDLPLKETQPPLNLNETPIRSSAAVQSEDFDF 60

Query: 61  NHWPPPPSPPPMCAADDIFFQGHLLPLRLSVSSDNTHNH-FFSKPLSARSESMDHNMLRF 120
           NH  PPP P PMCAAD++FFQGH+LPL  S SS+N+HN+ FF +  S RSES D  MLRF
Sbjct: 61  NHC-PPPLPQPMCAADEVFFQGHILPLCHSFSSENSHNNPFFPRNSSTRSESSD--MLRF 120

Query: 121 RNGSSSSSSNSSRSHYSRCSSISNNSISIPTNSKPRTQNNVFHSHPSPTPQIRSFSTFGR 180
           RNGS+SSS  SSRSHYSR SSISNNSISIPTNSKPR  NNVFHSHPSPTPQIRS ST GR
Sbjct: 121 RNGSTSSS--SSRSHYSRSSSISNNSISIPTNSKPRPHNNVFHSHPSPTPQIRSHSTSGR 180

Query: 181 RSRSRSSSRWDFFRVGLLRTPGMELHDLKTRTTVSNAVPT--VGQKTTASFLGVVSCKKS 240
             RSRSSSRWDFFR+GLLRTPGMELHDLKTRT  S+A         T  SFLGVVSCKKS
Sbjct: 181 --RSRSSSRWDFFRLGLLRTPGMELHDLKTRTNSSSAAAATPAAHTTAGSFLGVVSCKKS 240

Query: 241 VETIPAAKKIKNWSGNIGKKRNEKGKGIGIREKELNDNVEIREKEKEKATRLSHRRTFEW 299
           V+T+ AA K         KKR+E GK     EKE       +EKEKE+ TR+SHRRTFEW
Sbjct: 241 VDTVAAAGK---------KKRSENGK-----EKE-------KEKEKERETRVSHRRTFEW 285

[Close]

BLAST of CmoCh02G005200.1 vs. ExPASy TrEMBL
Match: A0A6J1F3H1 (probable membrane-associated kinase regulator 1 OS=Cucurbita moschata OX=3662 GN=LOC111439472 PE=4 SV=1)

HSP 1 Score: 315.8 bits (808), Expect = 1.9e-82
Identity = 197/315 (62.54%), Postives = 225/315 (71.43%), Query Frame = 0


Query: 1   MATTIHG-----EEHDKQDEDEEEALSLCDLPVKEKQQPSLLNENPI-------TEDFDF 60
           M  + HG     E++  Q++++EEALS CDLP+KE Q P  LNE PI       +EDFDF
Sbjct: 1   MGRSCHGDETWEEQNQIQEQEDEEALSFCDLPLKETQPPLNLNETPIRSSAAVQSEDFDF 60

Query: 61  NHWPPPPSPPPMCAADDIFFQGHLLPLRLSVSSDNTHNH-FFSKPLSARSESMDHNMLRF 120
           NH  PPP P PMCAAD++FFQGH+LPLR S SS+N+HN+ FF +  S RSES D  MLRF
Sbjct: 61  NHC-PPPLPQPMCAADEVFFQGHILPLRHSFSSENSHNNPFFPRNSSTRSESSD--MLRF 120

Query: 121 RNGSSSSSSNSSRSHYSRCSSISNNSISIPTNSKPRTQNNVFHSHPSPTPQIRSFSTFGR 180
           RNGS+SSS  SSRSHYSR SS+SNNSISIPTNSKPR  NNVFHSHPSPTPQIRS ST GR
Sbjct: 121 RNGSTSSS--SSRSHYSRSSSLSNNSISIPTNSKPRPHNNVFHSHPSPTPQIRSHSTSGR 180

Query: 181 RSRSRSSSRWDFFRVGLLRTPGMELHDLKTRTTVSN---AVPTVGQKTTA-SFLGVVSCK 240
             RSRSSSRWDFFR+GLLRTPGMELHDLKTRT  S+   A  T    TTA SFLGVVSCK
Sbjct: 181 --RSRSSSRWDFFRLGLLRTPGMELHDLKTRTNSSSSATAAATPAAHTTAGSFLGVVSCK 240

Query: 241 KSVETIPAAKKIKNWSGNIGKKRNEKGKGIGIREKELNDNVEIREKEKEKATRLSHRRTF 299
           KSV+T+ AA K         KKR+E GK                E EKE+ TR+SHRRTF
Sbjct: 241 KSVDTVAAAGK---------KKRSENGK----------------ENEKERGTRVSHRRTF 283

[Close]

BLAST of CmoCh02G005200.1 vs. NCBI nr
Match: XP_022947585.1 (uncharacterized protein LOC111451408 [Cucurbita moschata])

HSP 1 Score: 583.2 bits (1502), Expect = 1.3e-162
Identity = 300/300 (100.00%), Postives = 300/300 (100.00%), Query Frame = 0


Query: 1   MATTIHGEEHDKQDEDEEEALSLCDLPVKEKQQPSLLNENPITEDFDFNHWPPPPSPPPM 60
           MATTIHGEEHDKQDEDEEEALSLCDLPVKEKQQPSLLNENPITEDFDFNHWPPPPSPPPM
Sbjct: 1   MATTIHGEEHDKQDEDEEEALSLCDLPVKEKQQPSLLNENPITEDFDFNHWPPPPSPPPM 60

Query: 61  CAADDIFFQGHLLPLRLSVSSDNTHNHFFSKPLSARSESMDHNMLRFRNGSSSSSSNSSR 120
           CAADDIFFQGHLLPLRLSVSSDNTHNHFFSKPLSARSESMDHNMLRFRNGSSSSSSNSSR
Sbjct: 61  CAADDIFFQGHLLPLRLSVSSDNTHNHFFSKPLSARSESMDHNMLRFRNGSSSSSSNSSR 120

Query: 121 SHYSRCSSISNNSISIPTNSKPRTQNNVFHSHPSPTPQIRSFSTFGRRSRSRSSSRWDFF 180
           SHYSRCSSISNNSISIPTNSKPRTQNNVFHSHPSPTPQIRSFSTFGRRSRSRSSSRWDFF
Sbjct: 121 SHYSRCSSISNNSISIPTNSKPRTQNNVFHSHPSPTPQIRSFSTFGRRSRSRSSSRWDFF 180

Query: 181 RVGLLRTPGMELHDLKTRTTVSNAVPTVGQKTTASFLGVVSCKKSVETIPAAKKIKNWSG 240
           RVGLLRTPGMELHDLKTRTTVSNAVPTVGQKTTASFLGVVSCKKSVETIPAAKKIKNWSG
Sbjct: 181 RVGLLRTPGMELHDLKTRTTVSNAVPTVGQKTTASFLGVVSCKKSVETIPAAKKIKNWSG 240

Query: 241 NIGKKRNEKGKGIGIREKELNDNVEIREKEKEKATRLSHRRTFEWLKQLSHATFADQQSS 300
           NIGKKRNEKGKGIGIREKELNDNVEIREKEKEKATRLSHRRTFEWLKQLSHATFADQQSS
Sbjct: 241 NIGKKRNEKGKGIGIREKELNDNVEIREKEKEKATRLSHRRTFEWLKQLSHATFADQQSS 300

[Close]

BLAST of CmoCh02G005200.1 vs. NCBI nr
Match: KAG6605199.1 (hypothetical protein SDJN03_02516, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 562.8 bits (1449), Expect = 1.8e-156
Identity = 296/304 (97.37%), Postives = 299/304 (98.36%), Query Frame = 0


Query: 1   MATTIH-GEEHDKQ--DEDEEEALSLCDLPVKEKQQPSLLNENPITEDFDFNHWPPPPSP 60
           MATTIH GEEHDKQ  DEDEEEALSLCDLPVKEKQQP LLNENPITEDFDFNHWPPPPSP
Sbjct: 1   MATTIHGGEEHDKQDEDEDEEEALSLCDLPVKEKQQPLLLNENPITEDFDFNHWPPPPSP 60

Query: 61  PPMCAADDIFFQGHLLPLRLSVSSDNTHNHFFSKPLSARSESMDHNMLRFRNGSSSSSSN 120
           PPMCAADDIFFQGHLLPLRLSVSSDNTHNHFFSKPLSARSESMDHNMLRFRNGSSSSSSN
Sbjct: 61  PPMCAADDIFFQGHLLPLRLSVSSDNTHNHFFSKPLSARSESMDHNMLRFRNGSSSSSSN 120

Query: 121 SSRSHYSRCSSISNNSISIPTNSKPRTQNNVFHSHPSPTPQIRSFSTFGRRSRSRSSSRW 180
           SSRSHYSRCSSISNNSISIPTNSKPRTQNNVFHSHPSPTPQIRSFSTFGRRSRSRSSSRW
Sbjct: 121 SSRSHYSRCSSISNNSISIPTNSKPRTQNNVFHSHPSPTPQIRSFSTFGRRSRSRSSSRW 180

Query: 181 DFFRVGLLRTPGMELHDLKTRTTVSNAVPTVGQKTTASFLGVVSCKKSVETIPAAKKIKN 240
           DFFRVGLLRTPGMELHDLKTRTTV+NAVPTVGQKTTASFLGVVSCKKSVETIPAAKKI+N
Sbjct: 181 DFFRVGLLRTPGMELHDLKTRTTVTNAVPTVGQKTTASFLGVVSCKKSVETIPAAKKIRN 240

Query: 241 WSGNIGKKRNEKGKGIGIREKELNDNVEIREKEKEKATRLSHRRTFEWLKQLSHA-TFAD 300
           WSGNIGKKRNEKG+GIGIREKELNDNVEIREKEKEKATRLSHRRTFEWLKQLSHA TFAD
Sbjct: 241 WSGNIGKKRNEKGEGIGIREKELNDNVEIREKEKEKATRLSHRRTFEWLKQLSHATTFAD 300

[Close]

BLAST of CmoCh02G005200.1 vs. NCBI nr
Match: XP_023534091.1 (uncharacterized protein LOC111795757 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 532.7 bits (1371), Expect = 2.0e-147
Identity = 290/312 (92.95%), Postives = 292/312 (93.59%), Query Frame = 0


Query: 1   MATTIHGEEHDKQDE----DEEEALSLCDLPVKEKQQPSLLNENPITEDFD--FNHWPPP 60
           MATTIHGEEHDKQDE    DEEEALSLCDLPVKEKQQP LLNENPITEDFD  FNHWPPP
Sbjct: 1   MATTIHGEEHDKQDEDEDDDEEEALSLCDLPVKEKQQPLLLNENPITEDFDFNFNHWPPP 60

Query: 61  PSPPPMCAADDIFFQGHLLPLRLSVSSDNTHNHFFSKPLSARSESMDHNMLRFRNGSSSS 120
           PSPPPMCAADDIFFQGHLLPLRLSVSSDNTHN FFSKPLSARSESMDHNMLRFRNG SSS
Sbjct: 61  PSPPPMCAADDIFFQGHLLPLRLSVSSDNTHNQFFSKPLSARSESMDHNMLRFRNG-SSS 120

Query: 121 SSNSSRSHYSRCSSISNNSISIPTNSKPRTQNNVFHSHPSPTPQIRSFSTFGRRSRSRSS 180
           SSNSSRSHYSRCSSISNNSISIPTNSKPRTQNNVFHSHPSPTPQIRSFSTFGRRSRSRSS
Sbjct: 121 SSNSSRSHYSRCSSISNNSISIPTNSKPRTQNNVFHSHPSPTPQIRSFSTFGRRSRSRSS 180

Query: 181 SRWDFFRVGLLRTPGMELHDLKTRTT---VSNAVPTVGQKTTASFLGVVSCKKSVETIPA 240
           SRWDFFRVG+LRTPGMELHDLKTRTT      A PTVGQKTTASFLGVVSCKKSVETIPA
Sbjct: 181 SRWDFFRVGVLRTPGMELHDLKTRTTNAGAFEAAPTVGQKTTASFLGVVSCKKSVETIPA 240

Query: 241 AKKIKNWSGNIGKKRNEKGK--GIGIREKELNDNVEIREKEKEKATRLSHRRTFEWLKQL 300
           AKKI+NWSGNI KKRNEKGK  GIGIREKELNDNVEIREKEKEKATRLSHRRTFEWLKQL
Sbjct: 241 AKKIRNWSGNIVKKRNEKGKGIGIGIREKELNDNVEIREKEKEKATRLSHRRTFEWLKQL 300

[Close]

BLAST of CmoCh02G005200.1 vs. NCBI nr
Match: KAG7035177.1 (hypothetical protein SDJN02_01972, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 519.2 bits (1336), Expect = 2.3e-143
Identity = 277/304 (91.12%), Postives = 280/304 (92.11%), Query Frame = 0


Query: 1   MATTIH-GEEHDKQ--DEDEEEALSLCDLPVKEKQQPSLLNENPITEDFDFNHWPPPPSP 60
           MATTIH GEEHDKQ  DEDEEEALSLCDLPVKEKQQP LLNENPITEDFDFNHWPPPPSP
Sbjct: 1   MATTIHGGEEHDKQDEDEDEEEALSLCDLPVKEKQQPLLLNENPITEDFDFNHWPPPPSP 60

Query: 61  PPMCAADDIFFQGHLLPLRLSVSSDNTHNHFFSKPLSARSESMDHNMLRFRNGSSSSSSN 120
           PPMCAADDIFFQGHLLPLRLSVSSDNTHNHFFSKPLSARSESMDHNMLRFRNGSSSSSSN
Sbjct: 61  PPMCAADDIFFQGHLLPLRLSVSSDNTHNHFFSKPLSARSESMDHNMLRFRNGSSSSSSN 120

Query: 121 SSRSHYSRCSSISNNSISIPTNSKPRTQNNVFHSHPSPTPQIRSFSTFGRRSRSRSSSRW 180
           SSRSHYS                  RTQNNVFHSHPSPTPQIRSFSTFGRRSRSRSSSRW
Sbjct: 121 SSRSHYS------------------RTQNNVFHSHPSPTPQIRSFSTFGRRSRSRSSSRW 180

Query: 181 DFFRVGLLRTPGMELHDLKTRTTVSNAVPTVGQKTTASFLGVVSCKKSVETIPAAKKIKN 240
           DFFRVGLLRTPGMELHDLKTRTTV+NAVPTVGQKTT SFLGVVSCKKSVETIPAAKKI+N
Sbjct: 181 DFFRVGLLRTPGMELHDLKTRTTVTNAVPTVGQKTTGSFLGVVSCKKSVETIPAAKKIRN 240

Query: 241 WSGNIGKKRNEKGKGIGIREKELNDNVEIREKEKEKATRLSHRRTFEWLKQLSHA-TFAD 300
           WSGNIGKKRNEKGKGIGIREKELNDNVEIREKEK+KATRLSHRRTFEWLKQLSHA TFAD
Sbjct: 241 WSGNIGKKRNEKGKGIGIREKELNDNVEIREKEKDKATRLSHRRTFEWLKQLSHATTFAD 286

[Close]

BLAST of CmoCh02G005200.1 vs. NCBI nr
Match: XP_023006931.1 (uncharacterized protein LOC111499574 [Cucurbita maxima])

HSP 1 Score: 507.7 bits (1306), Expect = 7.0e-140
Identity = 274/309 (88.67%), Postives = 280/309 (90.61%), Query Frame = 0


Query: 1   MATTIHGEEHDKQD------EDEEEALSLCDLPVKEKQQPSLLNENPITEDFDFNHWPPP 60
           MATTIHG+EHD QD      E+EEEALS+CDLPVKEKQQP LL+ENPITEDFDFNHWP  
Sbjct: 1   MATTIHGDEHDNQDEEDEEEEEEEEALSMCDLPVKEKQQPLLLDENPITEDFDFNHWP-- 60

Query: 61  PSPPPMCAADDIFFQGHLLPLRLSVSSDNTHNHFFSKPLSARSESMDHNMLRFRNGSSSS 120
             PPPMCAADDIFFQGHLLPLRLSVSSDNTHNHFFSKPLSARSESMDHNMLRFRNG SSS
Sbjct: 61  --PPPMCAADDIFFQGHLLPLRLSVSSDNTHNHFFSKPLSARSESMDHNMLRFRNG-SSS 120

Query: 121 SSNSSRSHYSRCSSISNNSISIPTNSKPRTQNNVFHSHPSPTPQIRSFSTFGRRSRSRSS 180
           SSNSSRSHYSRCSSISNNSISIPTNSKPRTQNNVFHSHPSPTPQIRSFSTFGR    RSS
Sbjct: 121 SSNSSRSHYSRCSSISNNSISIPTNSKPRTQNNVFHSHPSPTPQIRSFSTFGR----RSS 180

Query: 181 SRWDFFRVGLLRTPGMELHDLKTRTT---VSNAVPTVGQKTTASFLGVVSCKKSVETIPA 240
           SRWDFFRVGLLRTPGMELHDLKTRTT      A PTVGQKT  +FLGVVSCKKSV+TIPA
Sbjct: 181 SRWDFFRVGLLRTPGMELHDLKTRTTNGAAFEAEPTVGQKTRGTFLGVVSCKKSVDTIPA 240

Query: 241 AKKIKNWSGNIGKKRNEKGKGIGIREKELNDNVEIREKEKEKATRLSHRRTFEWLKQLSH 300
           AKKIKNWSGNI KKRNEKGKGIGIRE ELNDNVEIREKEKEKATRLSHRRTFEWLKQLSH
Sbjct: 241 AKKIKNWSGNIVKKRNEKGKGIGIRENELNDNVEIREKEKEKATRLSHRRTFEWLKQLSH 300

[Close]

BLAST of CmoCh02G005200.1 vs. TAIR 10
Match: AT5G67350.1 (unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 82.8 bits (203), Expect = 5.1e-16
Identity = 102/322 (31.68%), Postives = 140/322 (43.48%), Query Frame = 0


Query: 8   EEHDKQDEDEEEALSLCDLPVKEKQQPSLLNENPITEDFD----------FNHWPPPPSP 67
           ++ D ++E+EEEALSLCDLP ++ +  S++ E    E+FD          F        P
Sbjct: 22  DDDDVEEEEEEEALSLCDLPNEKGELRSIVKEE--DEEFDSGFEFGIGSSFRAGSDSCEP 81

Query: 68  -PPMCAADDIFFQGHLLPLRLSVSSDNTHNHFFSKPLSARSESMDHNMLRFRNGSSSSSS 127
            P M  AD++FF+G +LPLR SVS D   N      L  RSES++      R G   S  
Sbjct: 82  APEMSTADELFFKGRILPLRHSVSLDAGLNE--PTRLITRSESVEFR----RTGIIRSD- 141

Query: 128 NSSRSHYSRCSSISNNSISIPTNSKPRTQNNVFHSHPSPTPQIRSFSTFGRRSRS----R 187
                       I NN I               +S PSP PQIR  S+   R  S    +
Sbjct: 142 ----------RKIKNNFID--------------YSQPSPQPQIRRSSSMTARVNSIRNPK 201

Query: 188 SSSRWDFFRVGLLRTPGMELHDLKTRTTVSNAVPTVGQKTTASFLGVVS----------- 247
           SSS WDF R+GL+RTP +EL     RTT  NA  +V + ++ S     S           
Sbjct: 202 SSSIWDFLRLGLVRTPEIEL-----RTTAGNAKLSVSRNSSCSSTSTSSNSKKIGSGESR 261

Query: 248 --------------CKKSVETIPAAKKIKNWSGNIGKKRNEKGKGIGIREKELNDNVEIR 290
                         C  S ET  A  KIK  SG   +K+                 +E +
Sbjct: 262 SRNRRRSFMFSDCKCSVSTETKMAPVKIKVSSGETEEKQR---------------MMEKK 290

The following BLAST results are available for this feature:

BLAST of CmoCh02G005200.1 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh02G005200.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G7B7	6.3e-163	100.00	uncharacterized protein LOC111451408 OS=Cucurbita moschata OX=3662 GN=LOC1114514...	[more]
A0A6J1KZ54	3.4e-140	88.67	uncharacterized protein LOC111499574 OS=Cucurbita maxima OX=3661 GN=LOC111499574...	[more]
A0A0A0LPT6	1.3e-83	65.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G277620 PE=4 SV=1	[more]
A0A6J1JCH9	2.9e-83	63.26	probable membrane-associated kinase regulator 1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1F3H1	1.9e-82	62.54	probable membrane-associated kinase regulator 1 OS=Cucurbita moschata OX=3662 GN...	[more]

BLAST of CmoCh02G005200.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022947585.1	1.3e-162	100.00	uncharacterized protein LOC111451408 [Cucurbita moschata]	[more]
KAG6605199.1	1.8e-156	97.37	hypothetical protein SDJN03_02516, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023534091.1	2.0e-147	92.95	uncharacterized protein LOC111795757 [Cucurbita pepo subsp. pepo]	[more]
KAG7035177.1	2.3e-143	91.12	hypothetical protein SDJN02_01972, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_023006931.1	7.0e-140	88.67	uncharacterized protein LOC111499574 [Cucurbita maxima]	[more]

BLAST of CmoCh02G005200.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G67350.1	5.1e-16	31.68	unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 257..277
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 105..167
None	No IPR available	PANTHER	PTHR33922:SF2	OS01G0888066 PROTEIN	coord: 8..294
None	No IPR available	PANTHER	PTHR33922	OS01G0888066 PROTEIN-RELATED	coord: 8..294

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmoCh02G005200	CmoCh02G005200	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh02G005200.1:exon:2259	CmoCh02G005200.1:exon:2259	exon
CmoCh02G005200.1:exon:2260	CmoCh02G005200.1:exon:2260	exon
CmoCh02G005200.1:exon:2261	CmoCh02G005200.1:exon:2261	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh02G005200.1:five_prime_utr	CmoCh02G005200.1:five_prime_utr	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh02G005200.1:cds	CmoCh02G005200.1:cds	CDS
CmoCh02G005200.1:cds	CmoCh02G005200.1:cds_2	CDS
CmoCh02G005200.1:cds	CmoCh02G005200.1:cds_3	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmoCh02G005200.1	CmoCh02G005200.1-protein	polypeptide