CmoCh01G008430.1 (mRNA) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh01G008430.1
TypemRNA
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
LocationCmo_Chr01: 4492637 .. 4493373 (-)
Sequence length378
RNA-Seq ExpressionCmoCh01G008430.1
SyntenyCmoCh01G008430.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATAAGGATTCCAAGGAAGGAGGGAATCCTGCAGCATCAAAAAGGATGTTGAAGCGATGGTATATGCTTGGAAGAAGAGAAGTGAAGGAAGTAAAAACAAAAGTTTGTGAGAGAAGAAGAGAAACTGAGAAGGGAAATGCAAGGAATGCTGAAAAAGAGGTAAAATACTGATAATTCTGCAGGAAACTGAAGATTGATGTTCTGATGATGCTGCTGCTGCTGCTTGTCTTCCCCATTTCAATGCCTGGATTTTTGTGTATTGAGAAGGCTGCCTCCTCTCCCCTGCCCTCCCCTGCCTTGCCCTGTGTGTTGAGCTGTATATATTTCCTTGCTTTTGGTTGGTTGGGGGGGTTGCGTTTGATTATGCTTTTGAAAAGTGGGTTAAATGGATAGGCTCAACCACTAAATGATAGCAGAAATGGCCAAGAGTGAGTTGTTCAAGCATTGCATTGTTTTTACCAAAGGAATCAGTGATGAACTGTCTTGGTGTGCTGCAGTTTGCAGGGCCCTTTGTAATCTCCAAACCCCACTGACCGTCTTGTTTAGCTGTTGCAATTACAGACAAATACAAGAGCCATGATTGATTGATCGGTATATTTATTCTTCCTTAATCATGTGATTTTAAGGTTCTGTGTTGTTGTAGAAGTAAATACAGAATCCAAGCAGTAGATTGTGAAGAGGTGTGTAGTAGATGCCTTGAAATTGAAGAAACCAATGCCTTTTCTGGAGGCTAG

mRNA sequence

ATGGATAAGGATTCCAAGGAAGGAGGGAATCCTGCAGCATCAAAAAGGATGTTGAAGCGATGGAAACTGAAGATTGATGTTCTGATGATGCTGCTGCTGCTGCTTGTCTTCCCCATTTCAATGCCTGGATTTTTGTGTATTGAGAAGGCTGCCTCCTCTCCCCTGCCCTCCCCTGCCTTGCCCTGTGTGTTGAGCTGTATATATTTCCTTGCTTTTGAAATGGCCAAGAGTGAGTTGTTCAAGCATTGCATTGTTTTTACCAAAGGAATCAGTGATGAACTGTCTTGAAGTAAATACAGAATCCAAGCAGTAGATTGTGAAGAGGTGTGTAGTAGATGCCTTGAAATTGAAGAAACCAATGCCTTTTCTGGAGGCTAG

Coding sequence (CDS)

ATGGATAAGGATTCCAAGGAAGGAGGGAATCCTGCAGCATCAAAAAGGATGTTGAAGCGATGGAAACTGAAGATTGATGTTCTGATGATGCTGCTGCTGCTGCTTGTCTTCCCCATTTCAATGCCTGGATTTTTGTGTATTGAGAAGGCTGCCTCCTCTCCCCTGCCCTCCCCTGCCTTGCCCTGTGTGTTGAGCTGTATATATTTCCTTGCTTTTGAAATGGCCAAGAGTGAGTTGTTCAAGCATTGCATTGTTTTTACCAAAGGAATCAGTGATGAACTGTCTTGA

Protein sequence

MDKDSKEGGNPAASKRMLKRWKLKIDVLMMLLLLLVFPISMPGFLCIEKAASSPLPSPALPCVLSCIYFLAFEMAKSELFKHCIVFTKGISDELS
Homology
The following BLAST results are available for this feature:
BLAST of CmoCh01G008430.1 vs.
Match NameE-valueIdentityDescription
BLAST of CmoCh01G008430.1 vs.
Match NameE-valueIdentityDescription
BLAST of CmoCh01G008430.1 vs.
Match NameE-valueIdentityDescription
BLAST of CmoCh01G008430.1 vs.
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CmoCh01G008430CmoCh01G008430gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmoCh01G008430.1:exon:5203CmoCh01G008430.1:exon:5203exon
CmoCh01G008430.1:exon:5204CmoCh01G008430.1:exon:5204exon
CmoCh01G008430.1:exon:5205CmoCh01G008430.1:exon:5205exon
CmoCh01G008430.1:exon:5206CmoCh01G008430.1:exon:5206exon


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmoCh01G008430.1:three_prime_utrCmoCh01G008430.1:three_prime_utrthree_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmoCh01G008430.1:cdsCmoCh01G008430.1:cds_4CDS
CmoCh01G008430.1:cdsCmoCh01G008430.1:cds_3CDS
CmoCh01G008430.1:cdsCmoCh01G008430.1:cds_2CDS
CmoCh01G008430.1:cdsCmoCh01G008430.1:cdsCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CmoCh01G008430.1CmoCh01G008430.1-proteinpolypeptide