CmoCh01G006340.1 (mRNA) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh01G006340.1
Type	mRNA
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Expansin
Location	Cmo_Chr01: 3246744 .. 3248140 (-)
Sequence length	1176
RNA-Seq Expression	CmoCh01G006340.1
Synteny	CmoCh01G006340.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CACTCTCTCACTCTCACTTTCTCTCTCTTTTCAGTTATTGCTTTCAGCCAAAAAAAAAAATGGCTACAACGGCGATTCTCCTCTGTATTGCATCTCTTATCTCTACAATGTGGTCGGCTACTGCGAGAATCCCCGGCGTCTACTCCGGCGGTCCTTGGGAGAGTGCCCACGCTACCTTCTACGGCGGCTCCGACGCCTCCGGCACAATGGGTAAGCCGGGATAGTGAAATAATGGGATTGAACTTCAAATGGGTAATGGGATATTGATTTTGGGTTTTGGTTTTGGGTTTTTGTGCAGGTGGGGCTTGTGGGTATGGGAATTTGTACAGCCAAGGCTACGGCGTGAACACGGCGGCGTTGAGCACAGCGCTATTCAATAATGGGCTGAGCTGTGGTGCCTGTTTCGAGATTAAATGTGCGAATGACCCGAGATGGTGCCATTCGGGCAGCCCGTCGATTATGATTACCGCCACGAACTTCTGCCCGCCCAATTTTGCTCTGCCCAGTGACAATGGCGGTTGGTGTAACCCTCCTCGGCCGCATTTCGATTTGGCGATGCCTATGTTCCTTAAAATCGCCGAGTACCGCGCTGGTATCGTCCCCGTCGCCTACCGCCGGTCAGCCTCTTCCCCCCTCCGTCGTATTTTGTCAGTTGATTATACTAATTAAACAAAATTATGAGAGTTTTAAATATATTTTGGATATGTGAAATGACGGTTTAGTAAGGGCTAATGGAGCATAATTACGCAGGGTGCCATGCCGGAAGCAAGGGGGGATACGTTACACAATCCACGGGTTCCGGTACTTCAACCTGGTTTTAATCACCAACGTCGCAGGTGCAGGGGATATCGTGAAGGTTAGCGTGAAAGGCACGCGCACAGGCTGGATGAGCATGAGCCGTAACTGGGGTCAAAACTGGCAGTCAAACGCCGTGTTAGTGGGCCAGGCCCTTTCATTTAGAGTCACAGGCAGTGACAGAAGGACTTCCACCACCTACAACGTGGCACCCCCTAATTGGCAGTTCGGCCAGACCTTCATCGGCAAGAATTTTAGGGTTTGAGAAAGGGGTTGAGGTGGCAATACATGATTGGAGGACTCCGGGTTAAGTAAATATCAGAGGAAGAAGGAAGCAAGAAGGCTGGGGAGGCTGAACAAAAGTGTGGCCCACAGTTCTAAATTATATATCATAATATTTTCAATCATATAATTTAATGTTGGCGTTGTTATAATTATGTACTACAATTTCCAACTGGGAAGTGTATTTTGGACACTTTTTATTTTTATTTTTTATAATTATAGTAGATTAATTACTAATTTAATGCATTTTCCCTACATTTATGTATCCTTATTAAAAAAATATATTCATAACATGCAATATAATAAACAAATATGTCACG

mRNA sequence

CACTCTCTCACTCTCACTTTCTCTCTCTTTTCAGTTATTGCTTTCAGCCAAAAAAAAAAATGGCTACAACGGCGATTCTCCTCTGTATTGCATCTCTTATCTCTACAATGTGGTCGGCTACTGCGAGAATCCCCGGCGTCTACTCCGGCGGTCCTTGGGAGAGTGCCCACGCTACCTTCTACGGCGGCTCCGACGCCTCCGGCACAATGGGTGGGGCTTGTGGGTATGGGAATTTGTACAGCCAAGGCTACGGCGTGAACACGGCGGCGTTGAGCACAGCGCTATTCAATAATGGGCTGAGCTGTGGTGCCTGTTTCGAGATTAAATGTGCGAATGACCCGAGATGGTGCCATTCGGGCAGCCCGTCGATTATGATTACCGCCACGAACTTCTGCCCGCCCAATTTTGCTCTGCCCAGTGACAATGGCGGTTGGTGTAACCCTCCTCGGCCGCATTTCGATTTGGCGATGCCTATGTTCCTTAAAATCGCCGAGTACCGCGCTGGTATCGTCCCCGTCGCCTACCGCCGGGTGCCATGCCGGAAGCAAGGGGGGATACGTTACACAATCCACGGGTTCCGGTACTTCAACCTGGTTTTAATCACCAACGTCGCAGGTGCAGGGGATATCGTGAAGGTTAGCGTGAAAGGCACGCGCACAGGCTGGATGAGCATGAGCCGTAACTGGGGTCAAAACTGGCAGTCAAACGCCGTGTTAGTGGGCCAGGCCCTTTCATTTAGAGTCACAGGCAGTGACAGAAGGACTTCCACCACCTACAACGTGGCACCCCCTAATTGGCAGTTCGGCCAGACCTTCATCGGCAAGAATTTTAGGGTTTGAGAAAGGGGTTGAGGTGGCAATACATGATTGGAGGACTCCGGGTTAAGTAAATATCAGAGGAAGAAGGAAGCAAGAAGGCTGGGGAGGCTGAACAAAAGTGTGGCCCACAGTTCTAAATTATATATCATAATATTTTCAATCATATAATTTAATGTTGGCGTTGTTATAATTATGTACTACAATTTCCAACTGGGAAGTGTATTTTGGACACTTTTTATTTTTATTTTTTATAATTATAGTAGATTAATTACTAATTTAATGCATTTTCCCTACATTTATGTATCCTTATTAAAAAAATATATTCATAACATGCAATATAATAAACAAATATGTCACG

Coding sequence (CDS)

ATGGCTACAACGGCGATTCTCCTCTGTATTGCATCTCTTATCTCTACAATGTGGTCGGCTACTGCGAGAATCCCCGGCGTCTACTCCGGCGGTCCTTGGGAGAGTGCCCACGCTACCTTCTACGGCGGCTCCGACGCCTCCGGCACAATGGGTGGGGCTTGTGGGTATGGGAATTTGTACAGCCAAGGCTACGGCGTGAACACGGCGGCGTTGAGCACAGCGCTATTCAATAATGGGCTGAGCTGTGGTGCCTGTTTCGAGATTAAATGTGCGAATGACCCGAGATGGTGCCATTCGGGCAGCCCGTCGATTATGATTACCGCCACGAACTTCTGCCCGCCCAATTTTGCTCTGCCCAGTGACAATGGCGGTTGGTGTAACCCTCCTCGGCCGCATTTCGATTTGGCGATGCCTATGTTCCTTAAAATCGCCGAGTACCGCGCTGGTATCGTCCCCGTCGCCTACCGCCGGGTGCCATGCCGGAAGCAAGGGGGGATACGTTACACAATCCACGGGTTCCGGTACTTCAACCTGGTTTTAATCACCAACGTCGCAGGTGCAGGGGATATCGTGAAGGTTAGCGTGAAAGGCACGCGCACAGGCTGGATGAGCATGAGCCGTAACTGGGGTCAAAACTGGCAGTCAAACGCCGTGTTAGTGGGCCAGGCCCTTTCATTTAGAGTCACAGGCAGTGACAGAAGGACTTCCACCACCTACAACGTGGCACCCCCTAATTGGCAGTTCGGCCAGACCTTCATCGGCAAGAATTTTAGGGTTTGA

Protein sequence

MATTAILLCIASLISTMWSATARIPGVYSGGPWESAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKCANDPRWCHSGSPSIMITATNFCPPNFALPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVAYRRVPCRKQGGIRYTIHGFRYFNLVLITNVAGAGDIVKVSVKGTRTGWMSMSRNWGQNWQSNAVLVGQALSFRVTGSDRRTSTTYNVAPPNWQFGQTFIGKNFRV

Homology

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BLAST of CmoCh01G006340.1 vs. ExPASy Swiss-Prot
Match: O48818 (Expansin-A4 OS=Arabidopsis thaliana OX=3702 GN=EXPA4 PE=1 SV=1)

HSP 1 Score: 461.1 bits (1185), Expect = 8.4e-129
Identity = 215/256 (83.98%), Postives = 237/256 (92.58%), Query Frame = 0


Query: 5   AILLCIASLISTMWS-ATARIPGVYSGGPWESAHATFYGGSDASGTMGGACGYGNLYSQG 64
           AI L I      ++S A ARIPG+YSGG W++AHATFYGGSDASGTMGGACGYGNLYSQG
Sbjct: 2   AIKLAILFTTFVLFSLADARIPGIYSGGAWQNAHATFYGGSDASGTMGGACGYGNLYSQG 61

Query: 65  YGVNTAALSTALFNNGLSCGACFEIKCANDPRWCHSGSPSIMITATNFCPPNFALPSDNG 124
           YG NTAALSTALFNNG+SCGACFE+KCANDP+WCHSGSPSI+ITATNFCPPN A PSDNG
Sbjct: 62  YGTNTAALSTALFNNGMSCGACFELKCANDPQWCHSGSPSILITATNFCPPNLAQPSDNG 121

Query: 125 GWCNPPRPHFDLAMPMFLKIAEYRAGIVPVAYRRVPCRKQGGIRYTIHGFRYFNLVLITN 184
           GWCNPPR HFDLAMP+FLKIA+YRAGIVPV+YRRVPCRK+GGIR+TI+G RYFNLVLITN
Sbjct: 122 GWCNPPREHFDLAMPVFLKIAQYRAGIVPVSYRRVPCRKRGGIRFTINGHRYFNLVLITN 181

Query: 185 VAGAGDIVKVSVKGTRTGWMSMSRNWGQNWQSNAVLVGQALSFRVTGSDRRTSTTYNVAP 244
           VAGAGDIV+ SVKG+RTGWMS+SRNWGQNWQSNAVLVGQALSFRVTGSDRRTST++N+ P
Sbjct: 182 VAGAGDIVRASVKGSRTGWMSLSRNWGQNWQSNAVLVGQALSFRVTGSDRRTSTSWNMVP 241

Query: 245 PNWQFGQTFIGKNFRV 260
            NWQFGQTF+GKNFRV
Sbjct: 242 SNWQFGQTFVGKNFRV 257

[Close]

BLAST of CmoCh01G006340.1 vs. ExPASy Swiss-Prot
Match: Q38865 (Expansin-A6 OS=Arabidopsis thaliana OX=3702 GN=EXPA6 PE=2 SV=2)

HSP 1 Score: 457.2 bits (1175), Expect = 1.2e-127
Identity = 210/256 (82.03%), Postives = 241/256 (94.14%), Query Frame = 0


Query: 5   AILLCIASLISTMWS-ATARIPGVYSGGPWESAHATFYGGSDASGTMGGACGYGNLYSQG 64
           A+L  + S+++T+ + + ARIPGVY+GG WE+AHATFYGGSDASGTMGGACGYGNLYSQG
Sbjct: 2   AMLGLVLSVLTTILALSEARIPGVYNGGGWETAHATFYGGSDASGTMGGACGYGNLYSQG 61

Query: 65  YGVNTAALSTALFNNGLSCGACFEIKCANDPRWCHSGSPSIMITATNFCPPNFALPSDNG 124
           YGVNTAALSTALFNNG SCGACFE+KCA+DP+WCHSGSPSI ITATNFCPPNFA PSDNG
Sbjct: 62  YGVNTAALSTALFNNGFSCGACFELKCASDPKWCHSGSPSIFITATNFCPPNFAQPSDNG 121

Query: 125 GWCNPPRPHFDLAMPMFLKIAEYRAGIVPVAYRRVPCRKQGGIRYTIHGFRYFNLVLITN 184
           GWCNPPRPHFDLAMPMFLKIAEYRAGIVPV++RRVPCRK+GGIR+TI+GFRYFNLVL+TN
Sbjct: 122 GWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSFRRVPCRKRGGIRFTINGFRYFNLVLVTN 181

Query: 185 VAGAGDIVKVSVKGTRTGWMSMSRNWGQNWQSNAVLVGQALSFRVTGSDRRTSTTYNVAP 244
           VAGAG+IV++ VKGT T WM+MSRNWGQNWQSN+VLVGQ+LSFRVT SDRR+ST++N+AP
Sbjct: 182 VAGAGNIVRLGVKGTHTSWMTMSRNWGQNWQSNSVLVGQSLSFRVTSSDRRSSTSWNIAP 241

Query: 245 PNWQFGQTFIGKNFRV 260
            NW+FGQTF+GKNFRV
Sbjct: 242 ANWKFGQTFMGKNFRV 257

[Close]

BLAST of CmoCh01G006340.1 vs. ExPASy Swiss-Prot
Match: Q852A1 (Expansin-A7 OS=Oryza sativa subsp. japonica OX=39947 GN=EXPA7 PE=2 SV=1)

HSP 1 Score: 447.2 bits (1149), Expect = 1.3e-124
Identity = 211/261 (80.84%), Postives = 231/261 (88.51%), Query Frame = 0


Query: 2   ATTAILLCIASLISTMWS-ATARIPGVYSGGPWESAHATFYGGSDASGTMGGACGYGNLY 61
           A   ++L +A++++   S A  RIPG Y GG W+SAHATFYGGSDASGTMGGACGYGNLY
Sbjct: 4   APRVLVLVVATVVALQVSPAAGRIPGAYGGGEWQSAHATFYGGSDASGTMGGACGYGNLY 63

Query: 62  SQGYGVNTAALSTALFNNGLSCGACFEIKCANDP--RWCHSGSPSIMITATNFCPPNFAL 121
           SQGYGVN AALSTALFN+G SCGACFEIKC N P   WCH GSPSI+ITATNFCPPN+AL
Sbjct: 64  SQGYGVNNAALSTALFNSGQSCGACFEIKCVNQPGWEWCHPGSPSILITATNFCPPNYAL 123

Query: 122 PSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVAYRRVPCRKQGGIRYTIHGFRYFNL 181
           PSDNGGWCNPPRPHFDLAMPMFL IAEYRAGIVPV+YRRVPCRK+GG+R+TI+GFRYFNL
Sbjct: 124 PSDNGGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVSYRRVPCRKKGGVRFTINGFRYFNL 183

Query: 182 VLITNVAGAGDIVKVSVKGTRTGWMSMSRNWGQNWQSNAVLVGQALSFRVTGSDRRTSTT 241
           VLITNVAGAGDIV+ SVKGT TGWM MSRNWGQNWQSN+VLVGQALSFRVTGSDRRTST+
Sbjct: 184 VLITNVAGAGDIVRASVKGTSTGWMPMSRNWGQNWQSNSVLVGQALSFRVTGSDRRTSTS 243

Query: 242 YNVAPPNWQFGQTFIGKNFRV 260
           +N AP  W FGQTF GKNFRV
Sbjct: 244 WNAAPAGWHFGQTFEGKNFRV 264

[Close]

BLAST of CmoCh01G006340.1 vs. ExPASy Swiss-Prot
Match: O80932 (Expansin-A3 OS=Arabidopsis thaliana OX=3702 GN=EXPA3 PE=2 SV=1)

HSP 1 Score: 439.1 bits (1128), Expect = 3.4e-122
Identity = 205/253 (81.03%), Postives = 229/253 (90.51%), Query Frame = 0


Query: 8   LCIASLISTMWSAT-ARIPGVYSGGPWESAHATFYGGSDASGTMGGACGYGNLYSQGYGV 67
           L +A   S + +AT A+IPGVYSGGPW++AHATFYGGSDASGTMGGACGYGNLYSQGYGV
Sbjct: 10  LWLAVTASFLLTATNAKIPGVYSGGPWQNAHATFYGGSDASGTMGGACGYGNLYSQGYGV 69

Query: 68  NTAALSTALFNNGLSCGACFEIKCANDPRWCHSGSPSIMITATNFCPPNFALPSDNGGWC 127
           NTAALSTALFNNG SCGACFEIKC +DPRWC  G+PSI++TATNFCPPNFA PSD+GGWC
Sbjct: 70  NTAALSTALFNNGFSCGACFEIKCTDDPRWCVPGNPSILVTATNFCPPNFAQPSDDGGWC 129

Query: 128 NPPRPHFDLAMPMFLKIAEYRAGIVPVAYRRVPCRKQGGIRYTIHGFRYFNLVLITNVAG 187
           NPPR HFDLAMPMFLKI  YRAGIVPV+YRRVPCRK GGIR+T++GFRYFNLVL+TNVAG
Sbjct: 130 NPPREHFDLAMPMFLKIGLYRAGIVPVSYRRVPCRKIGGIRFTVNGFRYFNLVLVTNVAG 189

Query: 188 AGDIVKVSVKGTRTGWMSMSRNWGQNWQSNAVLVGQALSFRVTGSDRRTSTTYNVAPPNW 247
           AGDI  VSVKG++T W+ MSRNWGQNWQSNAVL+GQ+LSFRVT SDRR+ST++NVAP  W
Sbjct: 190 AGDINGVSVKGSKTDWVRMSRNWGQNWQSNAVLIGQSLSFRVTASDRRSSTSWNVAPATW 249

Query: 248 QFGQTFIGKNFRV 260
           QFGQTF GKNFRV
Sbjct: 250 QFGQTFSGKNFRV 262

[Close]

BLAST of CmoCh01G006340.1 vs. ExPASy Swiss-Prot
Match: Q9M2S9 (Expansin-A16 OS=Arabidopsis thaliana OX=3702 GN=EXPA16 PE=2 SV=1)

HSP 1 Score: 437.6 bits (1124), Expect = 1.0e-121
Identity = 200/254 (78.74%), Postives = 226/254 (88.98%), Query Frame = 0


Query: 6   ILLCIASLISTMWSATARIPGVYSGGPWESAHATFYGGSDASGTMGGACGYGNLYSQGYG 65
           ILL I  L   +    A IP V+SGG W++AHATFYGG+DASGTMGGACGYGNLYSQGYG
Sbjct: 7   ILLTIFPLFLLLSFTDAGIPRVFSGGSWQTAHATFYGGNDASGTMGGACGYGNLYSQGYG 66

Query: 66  VNTAALSTALFNNGLSCGACFEIKCANDPRWCHSGSPSIMITATNFCPPNFALPSDNGGW 125
            NTAALST+LFN+G SCGACFEIKC NDP+WCH G+PS+ +TATNFCPPN A PSDNGGW
Sbjct: 67  TNTAALSTSLFNSGQSCGACFEIKCVNDPKWCHPGNPSVFVTATNFCPPNLAQPSDNGGW 126

Query: 126 CNPPRPHFDLAMPMFLKIAEYRAGIVPVAYRRVPCRKQGGIRYTIHGFRYFNLVLITNVA 185
           CNPPR HFDLAMP+FLKIAEYRAGIVP++YRRV CRK GGIR+TI+G RYFNLVLITNVA
Sbjct: 127 CNPPRSHFDLAMPVFLKIAEYRAGIVPISYRRVACRKSGGIRFTINGHRYFNLVLITNVA 186

Query: 186 GAGDIVKVSVKGTRTGWMSMSRNWGQNWQSNAVLVGQALSFRVTGSDRRTSTTYNVAPPN 245
           GAGDI + SVKG++TGWMS++RNWGQNWQSNAVLVGQ+LSFRVT SDRRTST++N+AP N
Sbjct: 187 GAGDIARTSVKGSKTGWMSLTRNWGQNWQSNAVLVGQSLSFRVTSSDRRTSTSWNIAPSN 246

Query: 246 WQFGQTFIGKNFRV 260
           WQFGQTF+GKNFRV
Sbjct: 247 WQFGQTFVGKNFRV 260

[Close]

BLAST of CmoCh01G006340.1 vs. ExPASy TrEMBL
Match: A0A6J1G9Q5 (Expansin OS=Cucurbita moschata OX=3662 GN=LOC111452237 PE=3 SV=1)

HSP 1 Score: 543.9 bits (1400), Expect = 3.7e-151
Identity = 259/259 (100.00%), Postives = 259/259 (100.00%), Query Frame = 0


Query: 1   MATTAILLCIASLISTMWSATARIPGVYSGGPWESAHATFYGGSDASGTMGGACGYGNLY 60
           MATTAILLCIASLISTMWSATARIPGVYSGGPWESAHATFYGGSDASGTMGGACGYGNLY
Sbjct: 1   MATTAILLCIASLISTMWSATARIPGVYSGGPWESAHATFYGGSDASGTMGGACGYGNLY 60

Query: 61  SQGYGVNTAALSTALFNNGLSCGACFEIKCANDPRWCHSGSPSIMITATNFCPPNFALPS 120
           SQGYGVNTAALSTALFNNGLSCGACFEIKCANDPRWCHSGSPSIMITATNFCPPNFALPS
Sbjct: 61  SQGYGVNTAALSTALFNNGLSCGACFEIKCANDPRWCHSGSPSIMITATNFCPPNFALPS 120

Query: 121 DNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVAYRRVPCRKQGGIRYTIHGFRYFNLVL 180
           DNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVAYRRVPCRKQGGIRYTIHGFRYFNLVL
Sbjct: 121 DNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVAYRRVPCRKQGGIRYTIHGFRYFNLVL 180

Query: 181 ITNVAGAGDIVKVSVKGTRTGWMSMSRNWGQNWQSNAVLVGQALSFRVTGSDRRTSTTYN 240
           ITNVAGAGDIVKVSVKGTRTGWMSMSRNWGQNWQSNAVLVGQALSFRVTGSDRRTSTTYN
Sbjct: 181 ITNVAGAGDIVKVSVKGTRTGWMSMSRNWGQNWQSNAVLVGQALSFRVTGSDRRTSTTYN 240

Query: 241 VAPPNWQFGQTFIGKNFRV 260
           VAPPNWQFGQTFIGKNFRV
Sbjct: 241 VAPPNWQFGQTFIGKNFRV 259

[Close]

BLAST of CmoCh01G006340.1 vs. ExPASy TrEMBL
Match: A0A6J1K7N8 (Expansin OS=Cucurbita maxima OX=3661 GN=LOC111493005 PE=3 SV=1)

HSP 1 Score: 539.7 bits (1389), Expect = 6.9e-150
Identity = 258/259 (99.61%), Postives = 258/259 (99.61%), Query Frame = 0


Query: 1   MATTAILLCIASLISTMWSATARIPGVYSGGPWESAHATFYGGSDASGTMGGACGYGNLY 60
           MATTAILLCIASLISTMWSATARIPGVYSGGPWESA ATFYGGSDASGTMGGACGYGNLY
Sbjct: 1   MATTAILLCIASLISTMWSATARIPGVYSGGPWESALATFYGGSDASGTMGGACGYGNLY 60

Query: 61  SQGYGVNTAALSTALFNNGLSCGACFEIKCANDPRWCHSGSPSIMITATNFCPPNFALPS 120
           SQGYGVNTAALSTALFNNGLSCGACFEIKCANDPRWCHSGSPSIMITATNFCPPNFALPS
Sbjct: 61  SQGYGVNTAALSTALFNNGLSCGACFEIKCANDPRWCHSGSPSIMITATNFCPPNFALPS 120

Query: 121 DNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVAYRRVPCRKQGGIRYTIHGFRYFNLVL 180
           DNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVAYRRVPCRKQGGIRYTIHGFRYFNLVL
Sbjct: 121 DNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVAYRRVPCRKQGGIRYTIHGFRYFNLVL 180

Query: 181 ITNVAGAGDIVKVSVKGTRTGWMSMSRNWGQNWQSNAVLVGQALSFRVTGSDRRTSTTYN 240
           ITNVAGAGDIVKVSVKGTRTGWMSMSRNWGQNWQSNAVLVGQALSFRVTGSDRRTSTTYN
Sbjct: 181 ITNVAGAGDIVKVSVKGTRTGWMSMSRNWGQNWQSNAVLVGQALSFRVTGSDRRTSTTYN 240

Query: 241 VAPPNWQFGQTFIGKNFRV 260
           VAPPNWQFGQTFIGKNFRV
Sbjct: 241 VAPPNWQFGQTFIGKNFRV 259

[Close]

BLAST of CmoCh01G006340.1 vs. ExPASy TrEMBL
Match: A0A1S3C6W6 (Expansin OS=Cucumis melo OX=3656 GN=LOC103497156 PE=2 SV=1)

HSP 1 Score: 518.5 bits (1334), Expect = 1.6e-143
Identity = 247/259 (95.37%), Postives = 252/259 (97.30%), Query Frame = 0


Query: 1   MATTAILLCIASLISTMWSATARIPGVYSGGPWESAHATFYGGSDASGTMGGACGYGNLY 60
           MA TAILLCIASLISTMW ATARIPGVYSGGPWESAHATFYGGSDASGTMGGACGYGNLY
Sbjct: 1   MAQTAILLCIASLISTMWPATARIPGVYSGGPWESAHATFYGGSDASGTMGGACGYGNLY 60

Query: 61  SQGYGVNTAALSTALFNNGLSCGACFEIKCANDPRWCHSGSPSIMITATNFCPPNFALPS 120
           SQGYGVNTAALSTALFNNGLSCGACFEIKCANDPRWCHSGSPSI+ITATNFCPPNFALPS
Sbjct: 61  SQGYGVNTAALSTALFNNGLSCGACFEIKCANDPRWCHSGSPSIVITATNFCPPNFALPS 120

Query: 121 DNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVAYRRVPCRKQGGIRYTIHGFRYFNLVL 180
           DNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVAYRRV CRK GGIR+TIHGFRYFNLVL
Sbjct: 121 DNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVAYRRVACRKPGGIRFTIHGFRYFNLVL 180

Query: 181 ITNVAGAGDIVKVSVKGTRTGWMSMSRNWGQNWQSNAVLVGQALSFRVTGSDRRTSTTYN 240
           ITNVAGAGDIVKVSVKGTRTGWMSMSRNWGQNWQSNAVLVGQALSFRVTGSDRRTST+ N
Sbjct: 181 ITNVAGAGDIVKVSVKGTRTGWMSMSRNWGQNWQSNAVLVGQALSFRVTGSDRRTSTSIN 240

Query: 241 VAPPNWQFGQTFIGKNFRV 260
           VAP +WQFGQTF G+NFRV
Sbjct: 241 VAPSDWQFGQTFTGRNFRV 259

[Close]

BLAST of CmoCh01G006340.1 vs. ExPASy TrEMBL
Match: A0A5A7VPX6 (Expansin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G002180 PE=3 SV=1)

HSP 1 Score: 518.5 bits (1334), Expect = 1.6e-143
Identity = 247/259 (95.37%), Postives = 252/259 (97.30%), Query Frame = 0


Query: 1   MATTAILLCIASLISTMWSATARIPGVYSGGPWESAHATFYGGSDASGTMGGACGYGNLY 60
           MA TAILLCIASLISTMW ATARIPGVYSGGPWESAHATFYGGSDASGTMGGACGYGNLY
Sbjct: 1   MAQTAILLCIASLISTMWPATARIPGVYSGGPWESAHATFYGGSDASGTMGGACGYGNLY 60

Query: 61  SQGYGVNTAALSTALFNNGLSCGACFEIKCANDPRWCHSGSPSIMITATNFCPPNFALPS 120
           SQGYGVNTAALSTALFNNGLSCGACFEIKCANDPRWCHSGSPSI+ITATNFCPPNFALPS
Sbjct: 61  SQGYGVNTAALSTALFNNGLSCGACFEIKCANDPRWCHSGSPSIVITATNFCPPNFALPS 120

Query: 121 DNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVAYRRVPCRKQGGIRYTIHGFRYFNLVL 180
           DNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVAYRRV CRK GGIR+TIHGFRYFNLVL
Sbjct: 121 DNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVAYRRVACRKPGGIRFTIHGFRYFNLVL 180

Query: 181 ITNVAGAGDIVKVSVKGTRTGWMSMSRNWGQNWQSNAVLVGQALSFRVTGSDRRTSTTYN 240
           ITNVAGAGDIVKVSVKGTRTGWMSMSRNWGQNWQSNAVLVGQALSFRVTGSDRRTST+ N
Sbjct: 181 ITNVAGAGDIVKVSVKGTRTGWMSMSRNWGQNWQSNAVLVGQALSFRVTGSDRRTSTSIN 240

Query: 241 VAPPNWQFGQTFIGKNFRV 260
           VAP +WQFGQTF G+NFRV
Sbjct: 241 VAPSDWQFGQTFTGRNFRV 259

[Close]

BLAST of CmoCh01G006340.1 vs. ExPASy TrEMBL
Match: A0A6J1HJM3 (Expansin OS=Cucurbita moschata OX=3662 GN=LOC111464689 PE=3 SV=1)

HSP 1 Score: 517.7 bits (1332), Expect = 2.8e-143
Identity = 242/259 (93.44%), Postives = 252/259 (97.30%), Query Frame = 0


Query: 1   MATTAILLCIASLISTMWSATARIPGVYSGGPWESAHATFYGGSDASGTMGGACGYGNLY 60
           MA  A+LLC+ SLIS MW+A ARIPG YSGGPW++AHATFYGGSDASGTMGGACGYGNLY
Sbjct: 1   MANPAVLLCLVSLISAMWTADARIPGAYSGGPWQTAHATFYGGSDASGTMGGACGYGNLY 60

Query: 61  SQGYGVNTAALSTALFNNGLSCGACFEIKCANDPRWCHSGSPSIMITATNFCPPNFALPS 120
           SQGYGVNTAALSTALFNNGLSCGACFEIKCANDPRWCHSGSPSI+ITATNFCPPNFALPS
Sbjct: 61  SQGYGVNTAALSTALFNNGLSCGACFEIKCANDPRWCHSGSPSIVITATNFCPPNFALPS 120

Query: 121 DNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVAYRRVPCRKQGGIRYTIHGFRYFNLVL 180
           DNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVA+RRVPCRKQGGIR+T+HGFRYFNLVL
Sbjct: 121 DNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVAFRRVPCRKQGGIRFTVHGFRYFNLVL 180

Query: 181 ITNVAGAGDIVKVSVKGTRTGWMSMSRNWGQNWQSNAVLVGQALSFRVTGSDRRTSTTYN 240
           ITNVAGAGDIVKVSVKGTRTGWMSMSRNWGQNWQSNAVLVGQALSFRVTGSDRRTSTTYN
Sbjct: 181 ITNVAGAGDIVKVSVKGTRTGWMSMSRNWGQNWQSNAVLVGQALSFRVTGSDRRTSTTYN 240

Query: 241 VAPPNWQFGQTFIGKNFRV 260
           VAP +WQFGQTFIGKNFRV
Sbjct: 241 VAPADWQFGQTFIGKNFRV 259

[Close]

BLAST of CmoCh01G006340.1 vs. NCBI nr
Match: XP_023523157.1 (expansin-A4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 543.9 bits (1400), Expect = 7.6e-151
Identity = 259/259 (100.00%), Postives = 259/259 (100.00%), Query Frame = 0


Query: 1   MATTAILLCIASLISTMWSATARIPGVYSGGPWESAHATFYGGSDASGTMGGACGYGNLY 60
           MATTAILLCIASLISTMWSATARIPGVYSGGPWESAHATFYGGSDASGTMGGACGYGNLY
Sbjct: 24  MATTAILLCIASLISTMWSATARIPGVYSGGPWESAHATFYGGSDASGTMGGACGYGNLY 83

Query: 61  SQGYGVNTAALSTALFNNGLSCGACFEIKCANDPRWCHSGSPSIMITATNFCPPNFALPS 120
           SQGYGVNTAALSTALFNNGLSCGACFEIKCANDPRWCHSGSPSIMITATNFCPPNFALPS
Sbjct: 84  SQGYGVNTAALSTALFNNGLSCGACFEIKCANDPRWCHSGSPSIMITATNFCPPNFALPS 143

Query: 121 DNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVAYRRVPCRKQGGIRYTIHGFRYFNLVL 180
           DNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVAYRRVPCRKQGGIRYTIHGFRYFNLVL
Sbjct: 144 DNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVAYRRVPCRKQGGIRYTIHGFRYFNLVL 203

Query: 181 ITNVAGAGDIVKVSVKGTRTGWMSMSRNWGQNWQSNAVLVGQALSFRVTGSDRRTSTTYN 240
           ITNVAGAGDIVKVSVKGTRTGWMSMSRNWGQNWQSNAVLVGQALSFRVTGSDRRTSTTYN
Sbjct: 204 ITNVAGAGDIVKVSVKGTRTGWMSMSRNWGQNWQSNAVLVGQALSFRVTGSDRRTSTTYN 263

Query: 241 VAPPNWQFGQTFIGKNFRV 260
           VAPPNWQFGQTFIGKNFRV
Sbjct: 264 VAPPNWQFGQTFIGKNFRV 282

[Close]

BLAST of CmoCh01G006340.1 vs. NCBI nr
Match: XP_022948612.1 (expansin-A4-like [Cucurbita moschata])

HSP 1 Score: 543.9 bits (1400), Expect = 7.6e-151
Identity = 259/259 (100.00%), Postives = 259/259 (100.00%), Query Frame = 0


Query: 1   MATTAILLCIASLISTMWSATARIPGVYSGGPWESAHATFYGGSDASGTMGGACGYGNLY 60
           MATTAILLCIASLISTMWSATARIPGVYSGGPWESAHATFYGGSDASGTMGGACGYGNLY
Sbjct: 1   MATTAILLCIASLISTMWSATARIPGVYSGGPWESAHATFYGGSDASGTMGGACGYGNLY 60

Query: 61  SQGYGVNTAALSTALFNNGLSCGACFEIKCANDPRWCHSGSPSIMITATNFCPPNFALPS 120
           SQGYGVNTAALSTALFNNGLSCGACFEIKCANDPRWCHSGSPSIMITATNFCPPNFALPS
Sbjct: 61  SQGYGVNTAALSTALFNNGLSCGACFEIKCANDPRWCHSGSPSIMITATNFCPPNFALPS 120

Query: 121 DNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVAYRRVPCRKQGGIRYTIHGFRYFNLVL 180
           DNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVAYRRVPCRKQGGIRYTIHGFRYFNLVL
Sbjct: 121 DNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVAYRRVPCRKQGGIRYTIHGFRYFNLVL 180

Query: 181 ITNVAGAGDIVKVSVKGTRTGWMSMSRNWGQNWQSNAVLVGQALSFRVTGSDRRTSTTYN 240
           ITNVAGAGDIVKVSVKGTRTGWMSMSRNWGQNWQSNAVLVGQALSFRVTGSDRRTSTTYN
Sbjct: 181 ITNVAGAGDIVKVSVKGTRTGWMSMSRNWGQNWQSNAVLVGQALSFRVTGSDRRTSTTYN 240

Query: 241 VAPPNWQFGQTFIGKNFRV 260
           VAPPNWQFGQTFIGKNFRV
Sbjct: 241 VAPPNWQFGQTFIGKNFRV 259

[Close]

BLAST of CmoCh01G006340.1 vs. NCBI nr
Match: KAG7036932.1 (Expansin-A4, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 540.4 bits (1391), Expect = 8.4e-150
Identity = 257/259 (99.23%), Postives = 258/259 (99.61%), Query Frame = 0


Query: 1   MATTAILLCIASLISTMWSATARIPGVYSGGPWESAHATFYGGSDASGTMGGACGYGNLY 60
           MAT AILLCIASLISTMWSATARIPGVYSGGPWESAHATFYGGSDASGTMGGACGYGNLY
Sbjct: 9   MATAAILLCIASLISTMWSATARIPGVYSGGPWESAHATFYGGSDASGTMGGACGYGNLY 68

Query: 61  SQGYGVNTAALSTALFNNGLSCGACFEIKCANDPRWCHSGSPSIMITATNFCPPNFALPS 120
           SQGYGVNTAALSTALFNNGLSCGACFEIKCANDPRWCHSGSPSIMITATNFCPPNFALPS
Sbjct: 69  SQGYGVNTAALSTALFNNGLSCGACFEIKCANDPRWCHSGSPSIMITATNFCPPNFALPS 128

Query: 121 DNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVAYRRVPCRKQGGIRYTIHGFRYFNLVL 180
           DNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVAYRRVPCRKQGGIRYTIHGF+YFNLVL
Sbjct: 129 DNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVAYRRVPCRKQGGIRYTIHGFQYFNLVL 188

Query: 181 ITNVAGAGDIVKVSVKGTRTGWMSMSRNWGQNWQSNAVLVGQALSFRVTGSDRRTSTTYN 240
           ITNVAGAGDIVKVSVKGTRTGWMSMSRNWGQNWQSNAVLVGQALSFRVTGSDRRTSTTYN
Sbjct: 189 ITNVAGAGDIVKVSVKGTRTGWMSMSRNWGQNWQSNAVLVGQALSFRVTGSDRRTSTTYN 248

Query: 241 VAPPNWQFGQTFIGKNFRV 260
           VAPPNWQFGQTFIGKNFRV
Sbjct: 249 VAPPNWQFGQTFIGKNFRV 267

[Close]

BLAST of CmoCh01G006340.1 vs. NCBI nr
Match: XP_022998337.1 (expansin-A4-like [Cucurbita maxima])

HSP 1 Score: 539.7 bits (1389), Expect = 1.4e-149
Identity = 258/259 (99.61%), Postives = 258/259 (99.61%), Query Frame = 0


Query: 1   MATTAILLCIASLISTMWSATARIPGVYSGGPWESAHATFYGGSDASGTMGGACGYGNLY 60
           MATTAILLCIASLISTMWSATARIPGVYSGGPWESA ATFYGGSDASGTMGGACGYGNLY
Sbjct: 1   MATTAILLCIASLISTMWSATARIPGVYSGGPWESALATFYGGSDASGTMGGACGYGNLY 60

Query: 61  SQGYGVNTAALSTALFNNGLSCGACFEIKCANDPRWCHSGSPSIMITATNFCPPNFALPS 120
           SQGYGVNTAALSTALFNNGLSCGACFEIKCANDPRWCHSGSPSIMITATNFCPPNFALPS
Sbjct: 61  SQGYGVNTAALSTALFNNGLSCGACFEIKCANDPRWCHSGSPSIMITATNFCPPNFALPS 120

Query: 121 DNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVAYRRVPCRKQGGIRYTIHGFRYFNLVL 180
           DNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVAYRRVPCRKQGGIRYTIHGFRYFNLVL
Sbjct: 121 DNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVAYRRVPCRKQGGIRYTIHGFRYFNLVL 180

Query: 181 ITNVAGAGDIVKVSVKGTRTGWMSMSRNWGQNWQSNAVLVGQALSFRVTGSDRRTSTTYN 240
           ITNVAGAGDIVKVSVKGTRTGWMSMSRNWGQNWQSNAVLVGQALSFRVTGSDRRTSTTYN
Sbjct: 181 ITNVAGAGDIVKVSVKGTRTGWMSMSRNWGQNWQSNAVLVGQALSFRVTGSDRRTSTTYN 240

Query: 241 VAPPNWQFGQTFIGKNFRV 260
           VAPPNWQFGQTFIGKNFRV
Sbjct: 241 VAPPNWQFGQTFIGKNFRV 259

[Close]

BLAST of CmoCh01G006340.1 vs. NCBI nr
Match: XP_038895721.1 (expansin-A4-like [Benincasa hispida])

HSP 1 Score: 518.8 bits (1335), Expect = 2.6e-143
Identity = 246/259 (94.98%), Postives = 252/259 (97.30%), Query Frame = 0


Query: 1   MATTAILLCIASLISTMWSATARIPGVYSGGPWESAHATFYGGSDASGTMGGACGYGNLY 60
           MA TAILLCI SLISTMW A ARIPGVYSGGPWESAHATFYGGSDASGTMGGACGYGNLY
Sbjct: 1   MAKTAILLCIVSLISTMWPAAARIPGVYSGGPWESAHATFYGGSDASGTMGGACGYGNLY 60

Query: 61  SQGYGVNTAALSTALFNNGLSCGACFEIKCANDPRWCHSGSPSIMITATNFCPPNFALPS 120
           SQGYGVNTAALSTALFNNGLSCGACFEIKCANDPRWCHSGSPSI+ITATNFCPPNFALPS
Sbjct: 61  SQGYGVNTAALSTALFNNGLSCGACFEIKCANDPRWCHSGSPSIVITATNFCPPNFALPS 120

Query: 121 DNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVAYRRVPCRKQGGIRYTIHGFRYFNLVL 180
           DNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVAYRRV CRKQGGIR+TIHGFRYFNLVL
Sbjct: 121 DNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVAYRRVACRKQGGIRFTIHGFRYFNLVL 180

Query: 181 ITNVAGAGDIVKVSVKGTRTGWMSMSRNWGQNWQSNAVLVGQALSFRVTGSDRRTSTTYN 240
           ITNVAGAGDIVKVSVKGTRTGW+SMSRNWGQNWQSNAVLVGQALSFRVTGSDRRTST++N
Sbjct: 181 ITNVAGAGDIVKVSVKGTRTGWLSMSRNWGQNWQSNAVLVGQALSFRVTGSDRRTSTSFN 240

Query: 241 VAPPNWQFGQTFIGKNFRV 260
           VAP +WQFGQTF GKNFRV
Sbjct: 241 VAPSDWQFGQTFTGKNFRV 259

[Close]

BLAST of CmoCh01G006340.1 vs. TAIR 10
Match: AT2G39700.1 (expansin A4 )

HSP 1 Score: 461.1 bits (1185), Expect = 6.0e-130
Identity = 215/256 (83.98%), Postives = 237/256 (92.58%), Query Frame = 0


Query: 5   AILLCIASLISTMWS-ATARIPGVYSGGPWESAHATFYGGSDASGTMGGACGYGNLYSQG 64
           AI L I      ++S A ARIPG+YSGG W++AHATFYGGSDASGTMGGACGYGNLYSQG
Sbjct: 2   AIKLAILFTTFVLFSLADARIPGIYSGGAWQNAHATFYGGSDASGTMGGACGYGNLYSQG 61

Query: 65  YGVNTAALSTALFNNGLSCGACFEIKCANDPRWCHSGSPSIMITATNFCPPNFALPSDNG 124
           YG NTAALSTALFNNG+SCGACFE+KCANDP+WCHSGSPSI+ITATNFCPPN A PSDNG
Sbjct: 62  YGTNTAALSTALFNNGMSCGACFELKCANDPQWCHSGSPSILITATNFCPPNLAQPSDNG 121

Query: 125 GWCNPPRPHFDLAMPMFLKIAEYRAGIVPVAYRRVPCRKQGGIRYTIHGFRYFNLVLITN 184
           GWCNPPR HFDLAMP+FLKIA+YRAGIVPV+YRRVPCRK+GGIR+TI+G RYFNLVLITN
Sbjct: 122 GWCNPPREHFDLAMPVFLKIAQYRAGIVPVSYRRVPCRKRGGIRFTINGHRYFNLVLITN 181

Query: 185 VAGAGDIVKVSVKGTRTGWMSMSRNWGQNWQSNAVLVGQALSFRVTGSDRRTSTTYNVAP 244
           VAGAGDIV+ SVKG+RTGWMS+SRNWGQNWQSNAVLVGQALSFRVTGSDRRTST++N+ P
Sbjct: 182 VAGAGDIVRASVKGSRTGWMSLSRNWGQNWQSNAVLVGQALSFRVTGSDRRTSTSWNMVP 241

Query: 245 PNWQFGQTFIGKNFRV 260
            NWQFGQTF+GKNFRV
Sbjct: 242 SNWQFGQTFVGKNFRV 257

[Close]

BLAST of CmoCh01G006340.1 vs. TAIR 10
Match: AT2G28950.1 (expansin A6 )

HSP 1 Score: 457.2 bits (1175), Expect = 8.7e-129
Identity = 210/256 (82.03%), Postives = 241/256 (94.14%), Query Frame = 0


Query: 5   AILLCIASLISTMWS-ATARIPGVYSGGPWESAHATFYGGSDASGTMGGACGYGNLYSQG 64
           A+L  + S+++T+ + + ARIPGVY+GG WE+AHATFYGGSDASGTMGGACGYGNLYSQG
Sbjct: 2   AMLGLVLSVLTTILALSEARIPGVYNGGGWETAHATFYGGSDASGTMGGACGYGNLYSQG 61

Query: 65  YGVNTAALSTALFNNGLSCGACFEIKCANDPRWCHSGSPSIMITATNFCPPNFALPSDNG 124
           YGVNTAALSTALFNNG SCGACFE+KCA+DP+WCHSGSPSI ITATNFCPPNFA PSDNG
Sbjct: 62  YGVNTAALSTALFNNGFSCGACFELKCASDPKWCHSGSPSIFITATNFCPPNFAQPSDNG 121

Query: 125 GWCNPPRPHFDLAMPMFLKIAEYRAGIVPVAYRRVPCRKQGGIRYTIHGFRYFNLVLITN 184
           GWCNPPRPHFDLAMPMFLKIAEYRAGIVPV++RRVPCRK+GGIR+TI+GFRYFNLVL+TN
Sbjct: 122 GWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSFRRVPCRKRGGIRFTINGFRYFNLVLVTN 181

Query: 185 VAGAGDIVKVSVKGTRTGWMSMSRNWGQNWQSNAVLVGQALSFRVTGSDRRTSTTYNVAP 244
           VAGAG+IV++ VKGT T WM+MSRNWGQNWQSN+VLVGQ+LSFRVT SDRR+ST++N+AP
Sbjct: 182 VAGAGNIVRLGVKGTHTSWMTMSRNWGQNWQSNSVLVGQSLSFRVTSSDRRSSTSWNIAP 241

Query: 245 PNWQFGQTFIGKNFRV 260
            NW+FGQTF+GKNFRV
Sbjct: 242 ANWKFGQTFMGKNFRV 257

[Close]

BLAST of CmoCh01G006340.1 vs. TAIR 10
Match: AT2G37640.1 (Barwin-like endoglucanases superfamily protein )

HSP 1 Score: 439.1 bits (1128), Expect = 2.4e-123
Identity = 205/253 (81.03%), Postives = 229/253 (90.51%), Query Frame = 0


Query: 8   LCIASLISTMWSAT-ARIPGVYSGGPWESAHATFYGGSDASGTMGGACGYGNLYSQGYGV 67
           L +A   S + +AT A+IPGVYSGGPW++AHATFYGGSDASGTMGGACGYGNLYSQGYGV
Sbjct: 10  LWLAVTASFLLTATNAKIPGVYSGGPWQNAHATFYGGSDASGTMGGACGYGNLYSQGYGV 69

Query: 68  NTAALSTALFNNGLSCGACFEIKCANDPRWCHSGSPSIMITATNFCPPNFALPSDNGGWC 127
           NTAALSTALFNNG SCGACFEIKC +DPRWC  G+PSI++TATNFCPPNFA PSD+GGWC
Sbjct: 70  NTAALSTALFNNGFSCGACFEIKCTDDPRWCVPGNPSILVTATNFCPPNFAQPSDDGGWC 129

Query: 128 NPPRPHFDLAMPMFLKIAEYRAGIVPVAYRRVPCRKQGGIRYTIHGFRYFNLVLITNVAG 187
           NPPR HFDLAMPMFLKI  YRAGIVPV+YRRVPCRK GGIR+T++GFRYFNLVL+TNVAG
Sbjct: 130 NPPREHFDLAMPMFLKIGLYRAGIVPVSYRRVPCRKIGGIRFTVNGFRYFNLVLVTNVAG 189

Query: 188 AGDIVKVSVKGTRTGWMSMSRNWGQNWQSNAVLVGQALSFRVTGSDRRTSTTYNVAPPNW 247
           AGDI  VSVKG++T W+ MSRNWGQNWQSNAVL+GQ+LSFRVT SDRR+ST++NVAP  W
Sbjct: 190 AGDINGVSVKGSKTDWVRMSRNWGQNWQSNAVLIGQSLSFRVTASDRRSSTSWNVAPATW 249

Query: 248 QFGQTFIGKNFRV 260
           QFGQTF GKNFRV
Sbjct: 250 QFGQTFSGKNFRV 262

[Close]

BLAST of CmoCh01G006340.1 vs. TAIR 10
Match: AT3G55500.1 (expansin A16 )

HSP 1 Score: 437.6 bits (1124), Expect = 7.1e-123
Identity = 200/254 (78.74%), Postives = 226/254 (88.98%), Query Frame = 0


Query: 6   ILLCIASLISTMWSATARIPGVYSGGPWESAHATFYGGSDASGTMGGACGYGNLYSQGYG 65
           ILL I  L   +    A IP V+SGG W++AHATFYGG+DASGTMGGACGYGNLYSQGYG
Sbjct: 7   ILLTIFPLFLLLSFTDAGIPRVFSGGSWQTAHATFYGGNDASGTMGGACGYGNLYSQGYG 66

Query: 66  VNTAALSTALFNNGLSCGACFEIKCANDPRWCHSGSPSIMITATNFCPPNFALPSDNGGW 125
            NTAALST+LFN+G SCGACFEIKC NDP+WCH G+PS+ +TATNFCPPN A PSDNGGW
Sbjct: 67  TNTAALSTSLFNSGQSCGACFEIKCVNDPKWCHPGNPSVFVTATNFCPPNLAQPSDNGGW 126

Query: 126 CNPPRPHFDLAMPMFLKIAEYRAGIVPVAYRRVPCRKQGGIRYTIHGFRYFNLVLITNVA 185
           CNPPR HFDLAMP+FLKIAEYRAGIVP++YRRV CRK GGIR+TI+G RYFNLVLITNVA
Sbjct: 127 CNPPRSHFDLAMPVFLKIAEYRAGIVPISYRRVACRKSGGIRFTINGHRYFNLVLITNVA 186

Query: 186 GAGDIVKVSVKGTRTGWMSMSRNWGQNWQSNAVLVGQALSFRVTGSDRRTSTTYNVAPPN 245
           GAGDI + SVKG++TGWMS++RNWGQNWQSNAVLVGQ+LSFRVT SDRRTST++N+AP N
Sbjct: 187 GAGDIARTSVKGSKTGWMSLTRNWGQNWQSNAVLVGQSLSFRVTSSDRRTSTSWNIAPSN 246

Query: 246 WQFGQTFIGKNFRV 260
           WQFGQTF+GKNFRV
Sbjct: 247 WQFGQTFVGKNFRV 260

[Close]

BLAST of CmoCh01G006340.1 vs. TAIR 10
Match: AT5G02260.1 (expansin A9 )

HSP 1 Score: 427.9 bits (1099), Expect = 5.6e-120
Identity = 193/254 (75.98%), Postives = 228/254 (89.76%), Query Frame = 0


Query: 6   ILLCIASLISTMWSATARIPGVYSGGPWESAHATFYGGSDASGTMGGACGYGNLYSQGYG 65
           ++  +A ++ T ++A A+IPGVY+GGPW +AHATFYG +DASGTMGGACGYGNLYSQGYG
Sbjct: 5   VITFMAVMVVTAFTANAKIPGVYTGGPWINAHATFYGEADASGTMGGACGYGNLYSQGYG 64

Query: 66  VNTAALSTALFNNGLSCGACFEIKCANDPRWCHSGSPSIMITATNFCPPNFALPSDNGGW 125
           VNTAALSTALFNNGLSCG+CFE+KC NDP WC  G+PSI+ITATNFCPPNF   SDNGGW
Sbjct: 65  VNTAALSTALFNNGLSCGSCFELKCINDPGWCLPGNPSILITATNFCPPNFNQASDNGGW 124

Query: 126 CNPPRPHFDLAMPMFLKIAEYRAGIVPVAYRRVPCRKQGGIRYTIHGFRYFNLVLITNVA 185
           CNPPR HFDLAMPMFL IA+Y+AGIVPV+YRR+PCRK+GGIR+TI+GF+YFNLVL+TNVA
Sbjct: 125 CNPPREHFDLAMPMFLSIAKYKAGIVPVSYRRIPCRKKGGIRFTINGFKYFNLVLVTNVA 184

Query: 186 GAGDIVKVSVKGTRTGWMSMSRNWGQNWQSNAVLVGQALSFRVTGSDRRTSTTYNVAPPN 245
           GAGD++KVSVKG+ T W+ +SRNWGQNWQSNA+LVGQ+LSFRV  SD R+ST+ N+AP N
Sbjct: 185 GAGDVIKVSVKGSNTQWLDLSRNWGQNWQSNALLVGQSLSFRVKTSDGRSSTSNNIAPSN 244

Query: 246 WQFGQTFIGKNFRV 260
           WQFGQT+ GKNFRV
Sbjct: 245 WQFGQTYSGKNFRV 258

The following BLAST results are available for this feature:

BLAST of CmoCh01G006340.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O48818	8.4e-129	83.98	Expansin-A4 OS=Arabidopsis thaliana OX=3702 GN=EXPA4 PE=1 SV=1	[more]
Q38865	1.2e-127	82.03	Expansin-A6 OS=Arabidopsis thaliana OX=3702 GN=EXPA6 PE=2 SV=2	[more]
Q852A1	1.3e-124	80.84	Expansin-A7 OS=Oryza sativa subsp. japonica OX=39947 GN=EXPA7 PE=2 SV=1	[more]
O80932	3.4e-122	81.03	Expansin-A3 OS=Arabidopsis thaliana OX=3702 GN=EXPA3 PE=2 SV=1	[more]
Q9M2S9	1.0e-121	78.74	Expansin-A16 OS=Arabidopsis thaliana OX=3702 GN=EXPA16 PE=2 SV=1	[more]

BLAST of CmoCh01G006340.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G9Q5	3.7e-151	100.00	Expansin OS=Cucurbita moschata OX=3662 GN=LOC111452237 PE=3 SV=1	[more]
A0A6J1K7N8	6.9e-150	99.61	Expansin OS=Cucurbita maxima OX=3661 GN=LOC111493005 PE=3 SV=1	[more]
A0A1S3C6W6	1.6e-143	95.37	Expansin OS=Cucumis melo OX=3656 GN=LOC103497156 PE=2 SV=1	[more]
A0A5A7VPX6	1.6e-143	95.37	Expansin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G002180 PE=3...	[more]
A0A6J1HJM3	2.8e-143	93.44	Expansin OS=Cucurbita moschata OX=3662 GN=LOC111464689 PE=3 SV=1	[more]

BLAST of CmoCh01G006340.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023523157.1	7.6e-151	100.00	expansin-A4-like [Cucurbita pepo subsp. pepo]	[more]
XP_022948612.1	7.6e-151	100.00	expansin-A4-like [Cucurbita moschata]	[more]
KAG7036932.1	8.4e-150	99.23	Expansin-A4, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022998337.1	1.4e-149	99.61	expansin-A4-like [Cucurbita maxima]	[more]
XP_038895721.1	2.6e-143	94.98	expansin-A4-like [Benincasa hispida]	[more]

BLAST of CmoCh01G006340.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G39700.1	6.0e-130	83.98	expansin A4	[more]
AT2G28950.1	8.7e-129	82.03	expansin A6	[more]
AT2G37640.1	2.4e-123	81.03	Barwin-like endoglucanases superfamily protein	[more]
AT3G55500.1	7.1e-123	78.74	expansin A16	[more]
AT5G02260.1	5.6e-120	75.98	expansin A9	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007118	Expansin/Lol pI	PRINTS	PR01225	EXPANSNFAMLY	coord: 202..216 score: 71.5 coord: 148..164 score: 67.35 coord: 240..254 score: 58.33 coord: 72..90 score: 73.29 coord: 32..47 score: 67.19 coord: 50..68 score: 76.97
IPR002963	Expansin	PRINTS	PR01226	EXPANSIN	coord: 140..153 score: 78.33 coord: 104..114 score: 82.42 coord: 240..256 score: 65.49 coord: 90..101 score: 53.33 coord: 123..140 score: 81.3 coord: 176..197 score: 73.18 coord: 211..232 score: 74.09 coord: 63..77 score: 90.0 coord: 164..176 score: 69.49
IPR007112	Expansin/pollen allergen, DPBB domain	SMART	SM00837	dpbb_1	coord: 68..155 e-value: 2.8E-58 score: 209.6
IPR007112	Expansin/pollen allergen, DPBB domain	PROSITE	PS50842	EXPANSIN_EG45	coord: 51..165 score: 31.084461
IPR009009	RlpA-like protein, double-psi beta-barrel domain	PFAM	PF03330	DPBB_1	coord: 68..155 e-value: 2.2E-21 score: 76.0
IPR036908	RlpA-like domain superfamily	GENE3D	2.40.40.10		coord: 20..161 e-value: 1.3E-47 score: 163.3
IPR036908	RlpA-like domain superfamily	SUPERFAMILY	50685	Barwin-like endoglucanases	coord: 32..183
IPR036749	Expansin, cellulose-binding-like domain superfamily	GENE3D	2.60.40.760		coord: 166..257 e-value: 4.9E-23 score: 82.9
IPR036749	Expansin, cellulose-binding-like domain superfamily	SUPERFAMILY	49590	PHL pollen allergen	coord: 162..253
IPR007117	Expansin, cellulose-binding-like domain	PFAM	PF01357	Expansin_C	coord: 166..243 e-value: 2.3E-25 score: 88.4
IPR007117	Expansin, cellulose-binding-like domain	PROSITE	PS50843	EXPANSIN_CBD	coord: 175..254 score: 21.431576
None	No IPR available	PANTHER	PTHR31867:SF100	EXPANSIN	coord: 5..258
None	No IPR available	PANTHER	PTHR31867	EXPANSIN-A15	coord: 5..258

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmoCh01G006340	CmoCh01G006340	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh01G006340.1:exon:4238	CmoCh01G006340.1:exon:4238	exon
CmoCh01G006340.1:exon:4237	CmoCh01G006340.1:exon:4237	exon
CmoCh01G006340.1:exon:4236	CmoCh01G006340.1:exon:4236	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh01G006340.1:three_prime_utr	CmoCh01G006340.1:three_prime_utr	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh01G006340.1:cds	CmoCh01G006340.1:cds_3	CDS
CmoCh01G006340.1:cds	CmoCh01G006340.1:cds_2	CDS
CmoCh01G006340.1:cds	CmoCh01G006340.1:cds	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh01G006340.1:five_prime_utr	CmoCh01G006340.1:five_prime_utr	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmoCh01G006340.1	CmoCh01G006340.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009664	plant-type cell wall organization
cellular_component	GO:0005576	extracellular region
cellular_component	GO:0016020	membrane