CmoCh01G006230.1 (mRNA) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh01G006230.1
Type	mRNA
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	clathrin interactor EPSIN 1
Location	Cmo_Chr01: 3217385 .. 3219180 (-)
Sequence length	1517
RNA-Seq Expression	CmoCh01G006230.1
Synteny	CmoCh01G006230.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TTATGCAAAATTTGTGAGAGAAAAATAAAATGGAAATAAAAAGGAGTAGTTTCATAGATAGCAAGAAAAATGGGTCAGAAGCTCCATAGGCGGCGAAGGGCGCTGAGAAGTGAGAGTCAACAATCCATTTATTAAAGCTTCAAACCCGCAACGATCGGCGTCCATCAGTCCTGAAATGAGTTAGCCACTTTGACTTTTACACTCCCAGATTTCCATAAATTCAACTCTCAAACCCAATCCCTCATCAACCCTTTCTTCAACCCTTTCTTCAACCTCTCCATTTGGTCTTCATTTTCCACCATTCTTTTTCCTTGCTCACATCACCATCTCTCTCTCTCCCCCTTCTAATTTTCAAGCATTTGGTGGGGTTTTGTCGGCATCTTTTGAATGCTTCTTTCTGTCTGTACCTGATGTTTGCTCTAAATCGAGCATCTTTTTCTTAGAACACCAAAGGGTTTTTGATTTATCATACCATGTCCATCTCGAGCAAATCCGACGGTATGGCCTCTCCCTCTTTCCATGATTTGAAGAAGCAAGCTTCTTTCTTTTTCAAGGAGAAGATCAAGACTGCTAGATTAGCCCTCACGGATGTCACCTCTGCTGAACTGTAACTTTATTCTTCCTGTTCCTGATGATGTTCTTCATGTTCATGGGTAGCTCTTGATCATGTTTTTTTTTTTTCCATTTTAGATTGACTGAAGAAGCTATCAGTGGAAACCCAGATGCAAGAACTTTGAGTTCAATTTCCAAGGCAGCTTTTGAGGTCGATGACTATTGGAGAATTGTAGCTATTCTCCATAAAAGGTTTTAGCTTTGTTCTTATTTGATCATTGTTTACAGTTTTTATGAATTAGATCCTCTGATCATCATGGGCAAAATCCTTAATAGTAGTCAGTTCTTTAGGGCGATAGTTTCCAGAGCTTTTACTTTTAAATTCCTCTTCATATTTAGTTTTGGCTTTGAATGTGCTGATTCATGATTGATAAAGTAAACGAACTTGCAAGGCAGATTGCTGAAATTTGAAAAGAAGAATTGGAGACTTTGCTACAACTCTCTCATCATTCTTGAACATCTCTTGACTCATGGACCAGAGAGTGTAGCAGAGGAGTTTCAGAGTGACAAACATGTTATTTCCCAAATGGGAACTTTCCAATATGTTGATGAAAAGGGGTAATGCCTATCAACCTCTCACTAATGTATATTACTCGACAAATTAATGTCGTCGAATGCTATCTGTTTGTGGTGAATTATGTATTTGATGCTGATTTGATTACAGGTTCAATTGGGGCATTTCAGTTAGAAACAAATCAGAGAGGATGTTGAACCTTCTTGAAAAAAGGTCTTTTCTCAAAGAGGAGAGGGACAAGGCTAGGAAGTTGACAAGAGGGATTCTTGGATTTGGAAGCTTCTCTTCCAGATCAAAGTCTCAAGGAGTTCTGGAAGATTGTTCTTCATCCATTGCAAGATATGGAAAGTGCAATTCAAACTTCAACAGTTCTGATAATCTTAACCAAGAACATCAAGCTTTGTCAGATCAAAAGACAGCAAACCCACAAGGAAACCAACAAGCTTTGGCTTATGTAGTAGATAGCCATGGGATCGAGAAGCCTGAAACTCGAGAAAGTGTCAAAGAAAACTTGGTTCCAAACAAGGAAGGCTCCAATAGATGGGATAATGGCGTGCTCGAGTCCAACCCCCTTTTGAGTGGTAAGGAGTTTAAAGATGGAGTTTCACCTGATGAGTATCATCCTTTCATTGATGAACCTGAATCAAATGCCTCATTGCTTTCGAGATAG

mRNA sequence

TTATGCAAAATTTGTGAGAGAAAAATAAAATGGAAATAAAAAGGAGTAGTTTCATAGATAGCAAGAAAAATGGGTCAGAAGCTCCATAGGCGGCGAAGGGCGCTGAGAAGTGAGAGTCAACAATCCATTTATTAAAGCTTCAAACCCGCAACGATCGGCGTCCATCAGTCCTGAAATGAGTTAGCCACTTTGACTTTTACACTCCCAGATTTCCATAAATTCAACTCTCAAACCCAATCCCTCATCAACCCTTTCTTCAACCCTTTCTTCAACCTCTCCATTTGGTCTTCATTTTCCACCATTCTTTTTCCTTGCTCACATCACCATCTCTCTCTCTCCCCCTTCTAATTTTCAAGCATTTGGTGGGGTTTTGTCGGCATCTTTTGAATGCTTCTTTCTGTCTGTACCTGATGTTTGCTCTAAATCGAGCATCTTTTTCTTAGAACACCAAAGGGTTTTTGATTTATCATACCATGTCCATCTCGAGCAAATCCGACGGTATGGCCTCTCCCTCTTTCCATGATTTGAAGAAGCAAGCTTCTTTCTTTTTCAAGGAGAAGATCAAGACTGCTAGATTAGCCCTCACGGATGTCACCTCTGCTGAACTATTGACTGAAGAAGCTATCAGTGGAAACCCAGATGCAAGAACTTTGAGTTCAATTTCCAAGGCAGCTTTTGAGGTCGATGACTATTGGAGAATTGTAGCTATTCTCCATAAAAGTTTTTATGAATTAGATCCTCTGATCATCATGGGCAAAATCCTTAATAGTAGTCAGTTCTTTAGGGCGATAGTTTCCAGAGCTTTTACTTTTAAATTCCTCTTCATATTTAGCAGATTGCTGAAATTTGAAAAGAAGAATTGGAGACTTTGCTACAACTCTCTCATCATTCTTGAACATCTCTTGACTCATGGACCAGAGAGTGTAGCAGAGGAGTTTCAGAGTGACAAACATGTTATTTCCCAAATGGGAACTTTCCAATATGTTGATGAAAAGGGGTTCAATTGGGGCATTTCAGTTAGAAACAAATCAGAGAGGATGTTGAACCTTCTTGAAAAAAGGTCTTTTCTCAAAGAGGAGAGGGACAAGGCTAGGAAGTTGACAAGAGGGATTCTTGGATTTGGAAGCTTCTCTTCCAGATCAAAGTCTCAAGGAGTTCTGGAAGATTGTTCTTCATCCATTGCAAGATATGGAAAGTGCAATTCAAACTTCAACAGTTCTGATAATCTTAACCAAGAACATCAAGCTTTGTCAGATCAAAAGACAGCAAACCCACAAGGAAACCAACAAGCTTTGGCTTATGTAGTAGATAGCCATGGGATCGAGAAGCCTGAAACTCGAGAAAGTGTCAAAGAAAACTTGGTTCCAAACAAGGAAGGCTCCAATAGATGGGATAATGGCGTGCTCGAGTCCAACCCCCTTTTGAGTGGTAAGGAGTTTAAAGATGGAGTTTCACCTGATGAGTATCATCCTTTCATTGATGAACCTGAATCAAATGCCTCATTGCTTTCGAGATAG

Coding sequence (CDS)

ATGTCCATCTCGAGCAAATCCGACGGTATGGCCTCTCCCTCTTTCCATGATTTGAAGAAGCAAGCTTCTTTCTTTTTCAAGGAGAAGATCAAGACTGCTAGATTAGCCCTCACGGATGTCACCTCTGCTGAACTATTGACTGAAGAAGCTATCAGTGGAAACCCAGATGCAAGAACTTTGAGTTCAATTTCCAAGGCAGCTTTTGAGGTCGATGACTATTGGAGAATTGTAGCTATTCTCCATAAAAGTTTTTATGAATTAGATCCTCTGATCATCATGGGCAAAATCCTTAATAGTAGTCAGTTCTTTAGGGCGATAGTTTCCAGAGCTTTTACTTTTAAATTCCTCTTCATATTTAGCAGATTGCTGAAATTTGAAAAGAAGAATTGGAGACTTTGCTACAACTCTCTCATCATTCTTGAACATCTCTTGACTCATGGACCAGAGAGTGTAGCAGAGGAGTTTCAGAGTGACAAACATGTTATTTCCCAAATGGGAACTTTCCAATATGTTGATGAAAAGGGGTTCAATTGGGGCATTTCAGTTAGAAACAAATCAGAGAGGATGTTGAACCTTCTTGAAAAAAGGTCTTTTCTCAAAGAGGAGAGGGACAAGGCTAGGAAGTTGACAAGAGGGATTCTTGGATTTGGAAGCTTCTCTTCCAGATCAAAGTCTCAAGGAGTTCTGGAAGATTGTTCTTCATCCATTGCAAGATATGGAAAGTGCAATTCAAACTTCAACAGTTCTGATAATCTTAACCAAGAACATCAAGCTTTGTCAGATCAAAAGACAGCAAACCCACAAGGAAACCAACAAGCTTTGGCTTATGTAGTAGATAGCCATGGGATCGAGAAGCCTGAAACTCGAGAAAGTGTCAAAGAAAACTTGGTTCCAAACAAGGAAGGCTCCAATAGATGGGATAATGGCGTGCTCGAGTCCAACCCCCTTTTGAGTGGTAAGGAGTTTAAAGATGGAGTTTCACCTGATGAGTATCATCCTTTCATTGATGAACCTGAATCAAATGCCTCATTGCTTTCGAGATAG

Protein sequence

MSISSKSDGMASPSFHDLKKQASFFFKEKIKTARLALTDVTSAELLTEEAISGNPDARTLSSISKAAFEVDDYWRIVAILHKSFYELDPLIIMGKILNSSQFFRAIVSRAFTFKFLFIFSRLLKFEKKNWRLCYNSLIILEHLLTHGPESVAEEFQSDKHVISQMGTFQYVDEKGFNWGISVRNKSERMLNLLEKRSFLKEERDKARKLTRGILGFGSFSSRSKSQGVLEDCSSSIARYGKCNSNFNSSDNLNQEHQALSDQKTANPQGNQQALAYVVDSHGIEKPETRESVKENLVPNKEGSNRWDNGVLESNPLLSGKEFKDGVSPDEYHPFIDEPESNASLLSR

Homology

[Close]

BLAST of CmoCh01G006230.1 vs. ExPASy Swiss-Prot
Match: A7Z035 (Clathrin interactor 1 OS=Bos taurus OX=9913 GN=CLINT1 PE=2 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 4.8e-10
Identity = 35/103 (33.98%), Postives = 59/103 (57.28%), Query Frame = 0


Query: 118 IFSRLLKFEKKNWRLCYNSLIILEHLLTHGPESVAEEFQSDKHVISQMGTFQYVDEKGFN 177
           ++SR+LK  KKNWR  Y SL++L +L+ +G E V    +   + +  +  + +VDE G +
Sbjct: 64  LWSRMLKDNKKNWRRVYKSLLLLAYLIRNGSERVVTSAREHIYDLRSLENYHFVDEHGKD 123

Query: 178 WGISVRNKSERMLNLLEKRSFLKEERDKARKLTRGILGFGSFS 221
            GI++R K + ++   +    L+EER KA+K     +G  S S
Sbjct: 124 QGINIRQKVKELVEFAQDDDRLREERKKAKKNKDKYVGVSSDS 166

[Close]

BLAST of CmoCh01G006230.1 vs. ExPASy Swiss-Prot
Match: Q14677 (Clathrin interactor 1 OS=Homo sapiens OX=9606 GN=CLINT1 PE=1 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 4.8e-10
Identity = 35/103 (33.98%), Postives = 59/103 (57.28%), Query Frame = 0


Query: 118 IFSRLLKFEKKNWRLCYNSLIILEHLLTHGPESVAEEFQSDKHVISQMGTFQYVDEKGFN 177
           ++SR+LK  KKNWR  Y SL++L +L+ +G E V    +   + +  +  + +VDE G +
Sbjct: 64  LWSRMLKDNKKNWRRVYKSLLLLAYLIRNGSERVVTSAREHIYDLRSLENYHFVDEHGKD 123

Query: 178 WGISVRNKSERMLNLLEKRSFLKEERDKARKLTRGILGFGSFS 221
            GI++R K + ++   +    L+EER KA+K     +G  S S
Sbjct: 124 QGINIRQKVKELVEFAQDDDRLREERKKAKKNKDKYVGVSSDS 166

[Close]

BLAST of CmoCh01G006230.1 vs. ExPASy Swiss-Prot
Match: Q99KN9 (Clathrin interactor 1 OS=Mus musculus OX=10090 GN=Clint1 PE=1 SV=2)

HSP 1 Score: 67.0 bits (162), Expect = 4.8e-10
Identity = 35/103 (33.98%), Postives = 59/103 (57.28%), Query Frame = 0


Query: 118 IFSRLLKFEKKNWRLCYNSLIILEHLLTHGPESVAEEFQSDKHVISQMGTFQYVDEKGFN 177
           ++SR+LK  KKNWR  Y SL++L +L+ +G E V    +   + +  +  + +VDE G +
Sbjct: 72  LWSRMLKDNKKNWRRVYKSLLLLAYLIRNGSERVVTSAREHIYDLRSLENYHFVDEHGKD 131

Query: 178 WGISVRNKSERMLNLLEKRSFLKEERDKARKLTRGILGFGSFS 221
            GI++R K + ++   +    L+EER KA+K     +G  S S
Sbjct: 132 QGINIRQKVKELVEFAQDDDRLREERKKAKKNKDKYVGVSSDS 174

[Close]

BLAST of CmoCh01G006230.1 vs. ExPASy Swiss-Prot
Match: Q4V882 (Epsin-3 OS=Rattus norvegicus OX=10116 GN=Epn3 PE=1 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 1.1e-09
Identity = 43/127 (33.86%), Postives = 67/127 (52.76%), Query Frame = 0


Query: 121 RLLKFEKKNWRLCYNSLIILEHLLTHGPESVAEEFQSDKHVISQMGTFQYVDEKGFNWGI 180
           R L    KNWR  Y +L +L++LL  G E VA + + + + I  +  FQY+D  G + G+
Sbjct: 62  RRLNDSGKNWRHVYKALTLLDYLLKTGSERVAHQCRENLYTIQTLKDFQYIDRDGKDQGV 121

Query: 181 SVRNKSERMLNLLEKRSFLKEERDKARKLTRGI----LGFGS----FSSRSKSQGVLEDC 240
           +VR K ++++ LL+    L++ER  A K    +    +G GS    FS RS+        
Sbjct: 122 NVREKVKQVMALLKDEERLRQERTHALKTKERMALEGMGIGSGQLGFSRRSRGSPSSYTS 181

[Close]

BLAST of CmoCh01G006230.1 vs. ExPASy Swiss-Prot
Match: Q91W69 (Epsin-3 OS=Mus musculus OX=10090 GN=Epn3 PE=1 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 2.4e-09
Identity = 42/127 (33.07%), Postives = 67/127 (52.76%), Query Frame = 0


Query: 121 RLLKFEKKNWRLCYNSLIILEHLLTHGPESVAEEFQSDKHVISQMGTFQYVDEKGFNWGI 180
           R L    KNWR  Y +L +L++LL  G E VA + + + + I  +  FQY+D  G + G+
Sbjct: 62  RRLNDSGKNWRHVYKALTLLDYLLKTGSERVAHQCRENLYTIQTLKDFQYIDRDGKDQGV 121

Query: 181 SVRNKSERMLNLLEKRSFLKEERDKARKLTRGI----LGFGS----FSSRSKSQGVLEDC 240
           +VR K ++++ LL+    L++ER  A K    +    +G GS    +S RS+        
Sbjct: 122 NVREKVKQVMALLKDEERLRQERTHALKTKERMALEGMGIGSGQLGYSRRSRGSPSSYTS 181

[Close]

BLAST of CmoCh01G006230.1 vs. ExPASy TrEMBL
Match: A0A6J1GBK0 (clathrin interactor EPSIN 1 OS=Cucurbita moschata OX=3662 GN=LOC111452671 PE=4 SV=1)

HSP 1 Score: 585.1 bits (1507), Expect = 1.9e-163
Identity = 309/347 (89.05%), Postives = 309/347 (89.05%), Query Frame = 0


Query: 1   MSISSKSDGMASPSFHDLKKQASFFFKEKIKTARLALTDVTSAELLTEEAISGNPDARTL 60
           MSISSKSDGMASPSFHDLKKQASFFFKEKIKTARLALTDVTSAELLTEEAISGNPDARTL
Sbjct: 1   MSISSKSDGMASPSFHDLKKQASFFFKEKIKTARLALTDVTSAELLTEEAISGNPDARTL 60

Query: 61  SSISKAAFEVDDYWRIVAILHKSFYELDPLIIMGKILNSSQFFRAIVSRAFTFKFLFIFS 120
           SSISKAAFEVDDYWRIVAILHK                                      
Sbjct: 61  SSISKAAFEVDDYWRIVAILHK-------------------------------------- 120

Query: 121 RLLKFEKKNWRLCYNSLIILEHLLTHGPESVAEEFQSDKHVISQMGTFQYVDEKGFNWGI 180
           RLLKFEKKNWRLCYNSLIILEHLLTHGPESVAEEFQSDKHVISQMGTFQYVDEKGFNWGI
Sbjct: 121 RLLKFEKKNWRLCYNSLIILEHLLTHGPESVAEEFQSDKHVISQMGTFQYVDEKGFNWGI 180

Query: 181 SVRNKSERMLNLLEKRSFLKEERDKARKLTRGILGFGSFSSRSKSQGVLEDCSSSIARYG 240
           SVRNKSERMLNLLEKRSFLKEERDKARKLTRGILGFGSFSSRSKSQGVLEDCSSSIARYG
Sbjct: 181 SVRNKSERMLNLLEKRSFLKEERDKARKLTRGILGFGSFSSRSKSQGVLEDCSSSIARYG 240

Query: 241 KCNSNFNSSDNLNQEHQALSDQKTANPQGNQQALAYVVDSHGIEKPETRESVKENLVPNK 300
           KCNSNFNSSDNLNQEHQALSDQKTANPQGNQQALAYVVDSHGIEKPETRESVKENLVPNK
Sbjct: 241 KCNSNFNSSDNLNQEHQALSDQKTANPQGNQQALAYVVDSHGIEKPETRESVKENLVPNK 300

Query: 301 EGSNRWDNGVLESNPLLSGKEFKDGVSPDEYHPFIDEPESNASLLSR 348
           EGSNRWDNGVLESNPLLSGKEFKDGVSPDEYHPFIDEPESNASLLSR
Sbjct: 301 EGSNRWDNGVLESNPLLSGKEFKDGVSPDEYHPFIDEPESNASLLSR 309

[Close]

BLAST of CmoCh01G006230.1 vs. ExPASy TrEMBL
Match: A0A6J1K6E8 (clathrin interactor EPSIN 1 OS=Cucurbita maxima OX=3661 GN=LOC111492730 PE=4 SV=1)

HSP 1 Score: 574.3 bits (1479), Expect = 3.4e-160
Identity = 303/347 (87.32%), Postives = 305/347 (87.90%), Query Frame = 0


Query: 1   MSISSKSDGMASPSFHDLKKQASFFFKEKIKTARLALTDVTSAELLTEEAISGNPDARTL 60
           MSISSKSDGMASPSFHD KKQASFFFKEKIKTARLALTDVTSAELLTEEAISGNPDARTL
Sbjct: 1   MSISSKSDGMASPSFHDWKKQASFFFKEKIKTARLALTDVTSAELLTEEAISGNPDARTL 60

Query: 61  SSISKAAFEVDDYWRIVAILHKSFYELDPLIIMGKILNSSQFFRAIVSRAFTFKFLFIFS 120
           SSISKAAFEVDDYWRIVAILHK                                      
Sbjct: 61  SSISKAAFEVDDYWRIVAILHK-------------------------------------- 120

Query: 121 RLLKFEKKNWRLCYNSLIILEHLLTHGPESVAEEFQSDKHVISQMGTFQYVDEKGFNWGI 180
           RLLKFEKKNWRLCYNSLIILEHLLTHGPESVAEEFQSDKHVISQMGTFQYVDEKGFNWGI
Sbjct: 121 RLLKFEKKNWRLCYNSLIILEHLLTHGPESVAEEFQSDKHVISQMGTFQYVDEKGFNWGI 180

Query: 181 SVRNKSERMLNLLEKRSFLKEERDKARKLTRGILGFGSFSSRSKSQGVLEDCSSSIARYG 240
           SVRNKSERMLNLLEKRSFLKEERDKARKLTRGILGFGSFSSRSKSQGVLEDCSSSIARYG
Sbjct: 181 SVRNKSERMLNLLEKRSFLKEERDKARKLTRGILGFGSFSSRSKSQGVLEDCSSSIARYG 240

Query: 241 KCNSNFNSSDNLNQEHQALSDQKTANPQGNQQALAYVVDSHGIEKPETRESVKENLVPNK 300
           KCNSNFNSSDNLNQEHQAL DQK ANPQGN +ALAYVVDSHGIEKPETRESVKENLVPNK
Sbjct: 241 KCNSNFNSSDNLNQEHQALPDQKAANPQGNHEALAYVVDSHGIEKPETRESVKENLVPNK 300

Query: 301 EGSNRWDNGVLESNPLLSGKEFKDGVSPDEYHPFIDEPESNASLLSR 348
           EGSNRWDNGVLESNPLLSGKEFK+GVSPDEYHPFIDEPESNASLLSR
Sbjct: 301 EGSNRWDNGVLESNPLLSGKEFKEGVSPDEYHPFIDEPESNASLLSR 309

[Close]

BLAST of CmoCh01G006230.1 vs. ExPASy TrEMBL
Match: A0A6J1DDE5 (clathrin interactor EPSIN 1 OS=Momordica charantia OX=3673 GN=LOC111019473 PE=4 SV=1)

HSP 1 Score: 454.9 bits (1169), Expect = 3.0e-124
Identity = 255/351 (72.65%), Postives = 274/351 (78.06%), Query Frame = 0


Query: 1   MSISSKSDGMASPSFHDLKKQASFFFKEKIKTARLALTDVTSAELLTEEAISGNPDARTL 60
           MSI SKS+ M SPSFH+LKKQASFFFKEKIKTARLALTDVTSAELLTEEAISGNPDARTL
Sbjct: 2   MSILSKSNSMGSPSFHELKKQASFFFKEKIKTARLALTDVTSAELLTEEAISGNPDARTL 61

Query: 61  SSISKAAFEVDDYWRIVAILHKSFYELDPLIIMGKILNSSQFFRAIVSRAFTFKFLFIFS 120
           SSISKAAFE+DDYWRIVAILHK                                      
Sbjct: 62  SSISKAAFELDDYWRIVAILHK-------------------------------------- 121

Query: 121 RLLKFEKKNWRLCYNSLIILEHLLTHGPESVAEEFQSDKHVISQMGTFQYVDEKGFNWGI 180
           RL+KFEKK+WRL YNSLIILEHLLTHGPESVAEEF  DK VI+QMG FQYVDEKGFNWGI
Sbjct: 122 RLVKFEKKHWRLSYNSLIILEHLLTHGPESVAEEFDDDKDVITQMGRFQYVDEKGFNWGI 181

Query: 181 SVRNKSERMLNLLEKRSFLKEERDKARKLTRGILGFGSFSSRSKSQGVLEDCSSSIARYG 240
           SVR +SER+L+LLEK S LKEER+KARKLTR ILGFGSFS RSKS G+L + S SI RYG
Sbjct: 182 SVRKRSERILSLLEKGSLLKEEREKARKLTREILGFGSFSLRSKSPGILVESSQSIGRYG 241

Query: 241 KCNSNFNSSDNLNQEH-QALSDQKTANPQGNQQALAYVVDSHGIEKPETRESVKENLVPN 300
           KCNSN N  DNL+QEH + LSDQK  NPQGNQ+ALA+VVDS  IE PETRESVKENLVPN
Sbjct: 242 KCNSNSNIQDNLDQEHDRVLSDQKATNPQGNQEALAHVVDSQEIEMPETRESVKENLVPN 301

Query: 301 KEGSNRWDNGVLESNPLLSGK--EFKDGVSPDEY-HPFID-EPESNASLLS 347
           KE  +RWDNGV ESNPLLSGK  EF DG S D+Y HPFID EPE+NAS LS
Sbjct: 302 KEELHRWDNGVGESNPLLSGKREEFMDGTSADDYHHPFIDAEPETNASFLS 314

[Close]

BLAST of CmoCh01G006230.1 vs. ExPASy TrEMBL
Match: A0A5A7VQ46 (Clathrin interactor 1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold352G00170 PE=4 SV=1)

HSP 1 Score: 365.2 bits (936), Expect = 3.1e-97
Identity = 218/349 (62.46%), Postives = 246/349 (70.49%), Query Frame = 0


Query: 10  MASPSFHDLKKQASFFFKEKIKTARLALTDVTSAELLTEEAISGNPDARTLSSISKAAFE 69
           MA+PSFHDLKKQASFFFKEKIKTARLALTDVTSAELLTEEAI+GNPDARTLSSIS+AAFE
Sbjct: 1   MATPSFHDLKKQASFFFKEKIKTARLALTDVTSAELLTEEAINGNPDARTLSSISRAAFE 60

Query: 70  VDDYWRIVAILHKSFYELDPLIIMGKILNSSQFFRAIVSRAFTFKFLFIFSRLLKFEKKN 129
           VDDYWRIVAILHK                                      RL+KFEKKN
Sbjct: 61  VDDYWRIVAILHK--------------------------------------RLVKFEKKN 120

Query: 130 WRLCYNSLIILEHLLTHGPESVAEEFQSDKHVISQMGTFQYVDEKGFNWGISVRNKSERM 189
           WR  YNSLIILEHLLTHGPESVA+EF+S+KHVI+QM  FQYVDEKGFNWGISVR +SER+
Sbjct: 121 WRNSYNSLIILEHLLTHGPESVAKEFESEKHVITQMANFQYVDEKGFNWGISVRKRSERI 180

Query: 190 LNLLEKRSFLKEERDKARKLTRGILGFGSFSSRSKSQGVLEDCSSSIARYGKCNSNFNSS 249
           LNLL+K S LK ER+KARKLTR ILGFGSFS RS SQG+ +  SS IARYGKCNSNFNS 
Sbjct: 181 LNLLDKGSLLKNEREKARKLTREILGFGSFSMRSNSQGIFQHPSSPIARYGKCNSNFNSL 240

Query: 250 DN--LNQEHQALSDQKTANPQGNQQALAYVVDSHGIEKPETRESVKENLVP--NKEGSNR 309
           DN  L+Q+  A+  QK                   I+  ETRE V++N +   NKE  +R
Sbjct: 241 DNNILHQDGSAVDGQK-------------------IKMLETREGVEDNFLVGINKEELHR 292

Query: 310 W-DNGVLESNPLLSGK----EFKDGVSPDEY-HPFI-DEPESNASLLSR 348
           W D+GV +  PLLSGK    E K+G+S D Y HPFI DE ++N SLLSR
Sbjct: 301 WDDDGVCKVKPLLSGKREEEELKNGISSDGYDHPFIDDELKTNFSLLSR 292

[Close]

BLAST of CmoCh01G006230.1 vs. ExPASy TrEMBL
Match: A0A5D3DE32 (Clathrin interactor 1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold710G00030 PE=4 SV=1)

HSP 1 Score: 362.8 bits (930), Expect = 1.5e-96
Identity = 217/349 (62.18%), Postives = 244/349 (69.91%), Query Frame = 0


Query: 10  MASPSFHDLKKQASFFFKEKIKTARLALTDVTSAELLTEEAISGNPDARTLSSISKAAFE 69
           MA+PSFHDLKKQASFFFKEKIKTARLALTDVTSAELLTEEAI+GNPDARTLSSIS+AAFE
Sbjct: 1   MATPSFHDLKKQASFFFKEKIKTARLALTDVTSAELLTEEAINGNPDARTLSSISRAAFE 60

Query: 70  VDDYWRIVAILHKSFYELDPLIIMGKILNSSQFFRAIVSRAFTFKFLFIFSRLLKFEKKN 129
           VDDYWRIVAILHK                                      RL+ FEKKN
Sbjct: 61  VDDYWRIVAILHK--------------------------------------RLVNFEKKN 120

Query: 130 WRLCYNSLIILEHLLTHGPESVAEEFQSDKHVISQMGTFQYVDEKGFNWGISVRNKSERM 189
           WR  YNSLIILEHLLTHGPESVA+EF+S+KHVI+QM  FQYVDEKGFNWGISVR +SER+
Sbjct: 121 WRNSYNSLIILEHLLTHGPESVAKEFESEKHVITQMANFQYVDEKGFNWGISVRKRSERI 180

Query: 190 LNLLEKRSFLKEERDKARKLTRGILGFGSFSSRSKSQGVLEDCSSSIARYGKCNSNFNSS 249
           LNLL+K S LK ER+KARKLTR ILGFGSFS RS SQG+ +  SS IARYGKCNSNFNS 
Sbjct: 181 LNLLDKGSLLKNEREKARKLTREILGFGSFSMRSNSQGIFQHPSSPIARYGKCNSNFNSL 240

Query: 250 DN--LNQEHQALSDQKTANPQGNQQALAYVVDSHGIEKPETRESVKENLVP--NKEGSNR 309
           DN  L+Q+  A+  QK                   I   ETRE V++N +   NKE  +R
Sbjct: 241 DNNILHQDGSAVDGQK-------------------INMLETREGVEDNFLVGINKEELHR 292

Query: 310 W-DNGVLESNPLLSGK----EFKDGVSPDEY-HPFI-DEPESNASLLSR 348
           W D+GV +  PLLSGK    E K+G+S D Y HPFI DE ++N SLLSR
Sbjct: 301 WDDDGVCKVKPLLSGKREEEELKNGISSDGYDHPFIDDELKTNFSLLSR 292

[Close]

BLAST of CmoCh01G006230.1 vs. NCBI nr
Match: XP_022949262.1 (clathrin interactor EPSIN 1 [Cucurbita moschata])

HSP 1 Score: 585.1 bits (1507), Expect = 4.0e-163
Identity = 309/347 (89.05%), Postives = 309/347 (89.05%), Query Frame = 0


Query: 1   MSISSKSDGMASPSFHDLKKQASFFFKEKIKTARLALTDVTSAELLTEEAISGNPDARTL 60
           MSISSKSDGMASPSFHDLKKQASFFFKEKIKTARLALTDVTSAELLTEEAISGNPDARTL
Sbjct: 1   MSISSKSDGMASPSFHDLKKQASFFFKEKIKTARLALTDVTSAELLTEEAISGNPDARTL 60

Query: 61  SSISKAAFEVDDYWRIVAILHKSFYELDPLIIMGKILNSSQFFRAIVSRAFTFKFLFIFS 120
           SSISKAAFEVDDYWRIVAILHK                                      
Sbjct: 61  SSISKAAFEVDDYWRIVAILHK-------------------------------------- 120

Query: 121 RLLKFEKKNWRLCYNSLIILEHLLTHGPESVAEEFQSDKHVISQMGTFQYVDEKGFNWGI 180
           RLLKFEKKNWRLCYNSLIILEHLLTHGPESVAEEFQSDKHVISQMGTFQYVDEKGFNWGI
Sbjct: 121 RLLKFEKKNWRLCYNSLIILEHLLTHGPESVAEEFQSDKHVISQMGTFQYVDEKGFNWGI 180

Query: 181 SVRNKSERMLNLLEKRSFLKEERDKARKLTRGILGFGSFSSRSKSQGVLEDCSSSIARYG 240
           SVRNKSERMLNLLEKRSFLKEERDKARKLTRGILGFGSFSSRSKSQGVLEDCSSSIARYG
Sbjct: 181 SVRNKSERMLNLLEKRSFLKEERDKARKLTRGILGFGSFSSRSKSQGVLEDCSSSIARYG 240

Query: 241 KCNSNFNSSDNLNQEHQALSDQKTANPQGNQQALAYVVDSHGIEKPETRESVKENLVPNK 300
           KCNSNFNSSDNLNQEHQALSDQKTANPQGNQQALAYVVDSHGIEKPETRESVKENLVPNK
Sbjct: 241 KCNSNFNSSDNLNQEHQALSDQKTANPQGNQQALAYVVDSHGIEKPETRESVKENLVPNK 300

Query: 301 EGSNRWDNGVLESNPLLSGKEFKDGVSPDEYHPFIDEPESNASLLSR 348
           EGSNRWDNGVLESNPLLSGKEFKDGVSPDEYHPFIDEPESNASLLSR
Sbjct: 301 EGSNRWDNGVLESNPLLSGKEFKDGVSPDEYHPFIDEPESNASLLSR 309

[Close]

BLAST of CmoCh01G006230.1 vs. NCBI nr
Match: KAG7036924.1 (Epsin-2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 576.2 bits (1484), Expect = 1.8e-160
Identity = 304/347 (87.61%), Postives = 306/347 (88.18%), Query Frame = 0


Query: 1   MSISSKSDGMASPSFHDLKKQASFFFKEKIKTARLALTDVTSAELLTEEAISGNPDARTL 60
           MSISSKSD MASPSFHDLKKQASFFFKEKIKTARLALTDVTSAELLTEEAI+GNPDARTL
Sbjct: 1   MSISSKSDVMASPSFHDLKKQASFFFKEKIKTARLALTDVTSAELLTEEAINGNPDARTL 60

Query: 61  SSISKAAFEVDDYWRIVAILHKSFYELDPLIIMGKILNSSQFFRAIVSRAFTFKFLFIFS 120
           SSISKAAFEVDDYWRIVAILHK                                      
Sbjct: 61  SSISKAAFEVDDYWRIVAILHK-------------------------------------- 120

Query: 121 RLLKFEKKNWRLCYNSLIILEHLLTHGPESVAEEFQSDKHVISQMGTFQYVDEKGFNWGI 180
           RLLKFEKKNWRLCYNSLIILEHLLTHGPESVAEEFQSDKHVISQMGTFQYVDEKGFNWGI
Sbjct: 121 RLLKFEKKNWRLCYNSLIILEHLLTHGPESVAEEFQSDKHVISQMGTFQYVDEKGFNWGI 180

Query: 181 SVRNKSERMLNLLEKRSFLKEERDKARKLTRGILGFGSFSSRSKSQGVLEDCSSSIARYG 240
           SVRNKSERMLNLLEKRSFLKEERDKARKLTRGILGFGSFSSRSKSQGVLEDCSSSIARYG
Sbjct: 181 SVRNKSERMLNLLEKRSFLKEERDKARKLTRGILGFGSFSSRSKSQGVLEDCSSSIARYG 240

Query: 241 KCNSNFNSSDNLNQEHQALSDQKTANPQGNQQALAYVVDSHGIEKPETRESVKENLVPNK 300
           KCNSNFNSSDNLNQEHQALSDQKTANPQGNQQA  Y+VDSHGIEKPETRESVKENLVPNK
Sbjct: 241 KCNSNFNSSDNLNQEHQALSDQKTANPQGNQQAFGYLVDSHGIEKPETRESVKENLVPNK 300

Query: 301 EGSNRWDNGVLESNPLLSGKEFKDGVSPDEYHPFIDEPESNASLLSR 348
           EGSNRWDNGVLESNPLLSGKEFKDGVSPDEYHPFIDEPESNASLLSR
Sbjct: 301 EGSNRWDNGVLESNPLLSGKEFKDGVSPDEYHPFIDEPESNASLLSR 309

[Close]

BLAST of CmoCh01G006230.1 vs. NCBI nr
Match: XP_023523147.1 (clathrin interactor EPSIN 1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 574.3 bits (1479), Expect = 7.0e-160
Identity = 306/347 (88.18%), Postives = 306/347 (88.18%), Query Frame = 0


Query: 1   MSISSKSDGMASPSFHDLKKQASFFFKEKIKTARLALTDVTSAELLTEEAISGNPDARTL 60
           MSISSKSDGMASPSFHDLKKQASFFFKEKIKTARLALTDVTSAELLTEEAISGNPDARTL
Sbjct: 1   MSISSKSDGMASPSFHDLKKQASFFFKEKIKTARLALTDVTSAELLTEEAISGNPDARTL 60

Query: 61  SSISKAAFEVDDYWRIVAILHKSFYELDPLIIMGKILNSSQFFRAIVSRAFTFKFLFIFS 120
           SSISKAAFEVDDYWRIVAILHK                                      
Sbjct: 61  SSISKAAFEVDDYWRIVAILHK-------------------------------------- 120

Query: 121 RLLKFEKKNWRLCYNSLIILEHLLTHGPESVAEEFQSDKHVISQMGTFQYVDEKGFNWGI 180
           RL KFEKKNWRLCYNSLIILEHLLTHGPESVAEEFQSDKHVISQMGTFQYVDEKGFNWGI
Sbjct: 121 RLQKFEKKNWRLCYNSLIILEHLLTHGPESVAEEFQSDKHVISQMGTFQYVDEKGFNWGI 180

Query: 181 SVRNKSERMLNLLEKRSFLKEERDKARKLTRGILGFGSFSSRSKSQGVLEDCSSSIARYG 240
           SVRNKSERMLNLLEKRSFLKEERDKARKLTRGILGFGSFSSRSKSQGVLEDCSSSIARYG
Sbjct: 181 SVRNKSERMLNLLEKRSFLKEERDKARKLTRGILGFGSFSSRSKSQGVLEDCSSSIARYG 240

Query: 241 KCNSNFNSSDNLNQEHQALSDQKTANPQGNQQALAYVVDSHGIEKPETRESVKENLVPNK 300
           KCNSNFNSSDNLNQEHQALSDQKTANPQGNQQ  AYVVDSHGIEKPETRESVKENLVPNK
Sbjct: 241 KCNSNFNSSDNLNQEHQALSDQKTANPQGNQQ--AYVVDSHGIEKPETRESVKENLVPNK 300

Query: 301 EGSNRWDNGVLESNPLLSGKEFKDGVSPDEYHPFIDEPESNASLLSR 348
           EGSNRWDNGVLESNPLLSGKEFKDGVSPDEYHPFIDEPESNASLLSR
Sbjct: 301 EGSNRWDNGVLESNPLLSGKEFKDGVSPDEYHPFIDEPESNASLLSR 307

[Close]

BLAST of CmoCh01G006230.1 vs. NCBI nr
Match: XP_022997927.1 (clathrin interactor EPSIN 1 [Cucurbita maxima])

HSP 1 Score: 574.3 bits (1479), Expect = 7.0e-160
Identity = 303/347 (87.32%), Postives = 305/347 (87.90%), Query Frame = 0


Query: 1   MSISSKSDGMASPSFHDLKKQASFFFKEKIKTARLALTDVTSAELLTEEAISGNPDARTL 60
           MSISSKSDGMASPSFHD KKQASFFFKEKIKTARLALTDVTSAELLTEEAISGNPDARTL
Sbjct: 1   MSISSKSDGMASPSFHDWKKQASFFFKEKIKTARLALTDVTSAELLTEEAISGNPDARTL 60

Query: 61  SSISKAAFEVDDYWRIVAILHKSFYELDPLIIMGKILNSSQFFRAIVSRAFTFKFLFIFS 120
           SSISKAAFEVDDYWRIVAILHK                                      
Sbjct: 61  SSISKAAFEVDDYWRIVAILHK-------------------------------------- 120

Query: 121 RLLKFEKKNWRLCYNSLIILEHLLTHGPESVAEEFQSDKHVISQMGTFQYVDEKGFNWGI 180
           RLLKFEKKNWRLCYNSLIILEHLLTHGPESVAEEFQSDKHVISQMGTFQYVDEKGFNWGI
Sbjct: 121 RLLKFEKKNWRLCYNSLIILEHLLTHGPESVAEEFQSDKHVISQMGTFQYVDEKGFNWGI 180

Query: 181 SVRNKSERMLNLLEKRSFLKEERDKARKLTRGILGFGSFSSRSKSQGVLEDCSSSIARYG 240
           SVRNKSERMLNLLEKRSFLKEERDKARKLTRGILGFGSFSSRSKSQGVLEDCSSSIARYG
Sbjct: 181 SVRNKSERMLNLLEKRSFLKEERDKARKLTRGILGFGSFSSRSKSQGVLEDCSSSIARYG 240

Query: 241 KCNSNFNSSDNLNQEHQALSDQKTANPQGNQQALAYVVDSHGIEKPETRESVKENLVPNK 300
           KCNSNFNSSDNLNQEHQAL DQK ANPQGN +ALAYVVDSHGIEKPETRESVKENLVPNK
Sbjct: 241 KCNSNFNSSDNLNQEHQALPDQKAANPQGNHEALAYVVDSHGIEKPETRESVKENLVPNK 300

Query: 301 EGSNRWDNGVLESNPLLSGKEFKDGVSPDEYHPFIDEPESNASLLSR 348
           EGSNRWDNGVLESNPLLSGKEFK+GVSPDEYHPFIDEPESNASLLSR
Sbjct: 301 EGSNRWDNGVLESNPLLSGKEFKEGVSPDEYHPFIDEPESNASLLSR 309

[Close]

BLAST of CmoCh01G006230.1 vs. NCBI nr
Match: KAG6607239.1 (Epsin-2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 573.2 bits (1476), Expect = 1.6e-159
Identity = 303/347 (87.32%), Postives = 305/347 (87.90%), Query Frame = 0


Query: 1   MSISSKSDGMASPSFHDLKKQASFFFKEKIKTARLALTDVTSAELLTEEAISGNPDARTL 60
           MSISSKSD MASPSFHDLKKQASFFFKEKIKTARLALTDVTSAELLTEEAI+GNPDARTL
Sbjct: 1   MSISSKSDVMASPSFHDLKKQASFFFKEKIKTARLALTDVTSAELLTEEAINGNPDARTL 60

Query: 61  SSISKAAFEVDDYWRIVAILHKSFYELDPLIIMGKILNSSQFFRAIVSRAFTFKFLFIFS 120
           SSISKAAFEVDDYWRIVAILHK                                      
Sbjct: 61  SSISKAAFEVDDYWRIVAILHK-------------------------------------- 120

Query: 121 RLLKFEKKNWRLCYNSLIILEHLLTHGPESVAEEFQSDKHVISQMGTFQYVDEKGFNWGI 180
           RLLKFEKKNWRLCYNSLIILEHLLTHGPESVAEEFQSDKHVISQMGTFQYVDEKGFNWGI
Sbjct: 121 RLLKFEKKNWRLCYNSLIILEHLLTHGPESVAEEFQSDKHVISQMGTFQYVDEKGFNWGI 180

Query: 181 SVRNKSERMLNLLEKRSFLKEERDKARKLTRGILGFGSFSSRSKSQGVLEDCSSSIARYG 240
           SVRNKSERMLNLLEKRSFLKEERDKARKLTR ILGFGSFSSRSKSQGVLEDCSSSIARYG
Sbjct: 181 SVRNKSERMLNLLEKRSFLKEERDKARKLTREILGFGSFSSRSKSQGVLEDCSSSIARYG 240

Query: 241 KCNSNFNSSDNLNQEHQALSDQKTANPQGNQQALAYVVDSHGIEKPETRESVKENLVPNK 300
           KCNSNFNSSDNLNQEHQALSDQKTANPQGNQQA  Y+VDSHGIEKPETRESVKENLVPNK
Sbjct: 241 KCNSNFNSSDNLNQEHQALSDQKTANPQGNQQAFGYLVDSHGIEKPETRESVKENLVPNK 300

Query: 301 EGSNRWDNGVLESNPLLSGKEFKDGVSPDEYHPFIDEPESNASLLSR 348
           EGSNRWDNGVLESNPLLSGKEFKDGVSPDEYHPFIDEPESNASLLSR
Sbjct: 301 EGSNRWDNGVLESNPLLSGKEFKDGVSPDEYHPFIDEPESNASLLSR 309

[Close]

BLAST of CmoCh01G006230.1 vs. TAIR 10
Match: AT3G46540.1 (ENTH/VHS family protein )

HSP 1 Score: 249.2 bits (635), Expect = 4.8e-66
Identity = 161/353 (45.61%), Postives = 204/353 (57.79%), Query Frame = 0


Query: 1   MSISSKSDGMASPSFHDLKKQASFFFKEKIKTARLALTDVTSAELLTEEAISG---NPDA 60
           MS +  S  M +PSF +LKKQASFFFKEK+KTARLALTDVT  +L+TEEA  G    P+ 
Sbjct: 4   MSRTRSSIAMGTPSFLELKKQASFFFKEKLKTARLALTDVTPLQLMTEEATDGESCGPNT 63

Query: 61  RTLSSISKAAFEVDDYWRIVAILHKSFYELDPLIIMGKILNSSQFFRAIVSRAFTFKFLF 120
           +TL SISKAAFE +DY  IV +LHK                                   
Sbjct: 64  QTLGSISKAAFEFEDYLAIVEVLHK----------------------------------- 123

Query: 121 IFSRLLKFEKKNWRLCYNSLIILEHLLTHGPESVAEEFQSDKHVISQMGTFQYVDEKGFN 180
              RL KF+K+NWR+ YNSLI++EHLLTHGPESV++EFQ D  VISQM TFQ +DEKGFN
Sbjct: 124 ---RLAKFDKRNWRMAYNSLIVVEHLLTHGPESVSDEFQGDIDVISQMQTFQQIDEKGFN 183

Query: 181 WGISVRNKSERMLNLLEKRSFLKEERDKARKLTRGILGFGSFSSRSKSQGVLE-DCSSSI 240
           WG++VR K+E++L LLEK   LKEER +AR+L+RGI GFGSF+ +S S  + E +     
Sbjct: 184 WGLAVRKKAEKVLKLLEKGELLKEERKRARELSRGIQGFGSFNHKSSSHSLSEHEVLQES 243

Query: 241 ARYGKCNSNFNSSDNLNQEHQALSDQKTAN--PQGNQQALAYVVDSHGIEKPETRESVKE 300
             Y KCNSNF  + + + +   +     AN  PQ        V D       E+R  +KE
Sbjct: 244 TVYRKCNSNFTKNYDEDDQENTMVSPNDANLFPQ------PLVAD----PSEESRTGMKE 301

Query: 301 NLVPNKEGSNRWDNGVLESNPLL--SGKEFKDGVSPDEYHPFIDEPESNASLL 346
           N+ P        D+   E NPLL  S KE ++    DE HPF D    +  +L
Sbjct: 304 NMDPE-------DDENTEVNPLLGFSKKEGQELAGEDENHPFTDGESKHTVVL 301

[Close]

BLAST of CmoCh01G006230.1 vs. TAIR 10
Match: AT1G08670.1 (ENTH/VHS family protein )

HSP 1 Score: 142.1 bits (357), Expect = 8.3e-34
Identity = 96/256 (37.50%), Postives = 145/256 (56.64%), Query Frame = 0


Query: 10  MASPSFHDLKKQASFFFKEKIKTARLALTDVTSAELLTEEAISGNP---DARTLSSISKA 69
           M +P  H+LKKQASFF KEKIKTARLA+TDVT+ ELLTEE    +    D+R++++I++ 
Sbjct: 5   MQNPVLHELKKQASFFIKEKIKTARLAVTDVTAEELLTEEVTGSDHSSIDSRSMAAITRV 64

Query: 70  AFEVDDYWRIVAILHKSFYELDPLIIMGKILNSSQFFRAIVSRAFTFKFLFIFSRLLKFE 129
           +FEVD + RIV IL +                                      R++ F+
Sbjct: 65  SFEVDQFQRIVKILRQ--------------------------------------RMVVFD 124

Query: 130 KKNWRLCYNSLIILEHLLTHGPESVAEEFQSDKHVISQMGTFQYVDEKGFNWGISVRNKS 189
           +K WR   N+L +L HLL +GP SV  EFQ ++ +I      +++DE+GF+ G+ VRN +
Sbjct: 125 RKEWRGMCNTLSMLNHLLLNGPLSVFSEFQHERAIIEDAIKMEWIDERGFDCGLKVRNIA 184

Query: 190 ERMLNLLEKRSFLKEERDKARKLTRG-ILGFG--SFSSRSKSQGVLEDCSSSIARYGKCN 249
           E++L LLE   FLK+ER++ RK + G I GFG  SF   S++     D S  ++ +  C 
Sbjct: 185 EKVLRLLEDDMFLKDERERNRKQSIGRITGFGNSSFVIHSETNNG-RDGSLMLSNHQTCE 221

Query: 250 SNFNSSDN--LNQEHQ 258
           ++  + D+  +  EH+
Sbjct: 245 NDCIADDHPFVENEHK 221

[Close]

BLAST of CmoCh01G006230.1 vs. TAIR 10
Match: AT3G23350.1 (ENTH/VHS family protein )

HSP 1 Score: 131.7 bits (330), Expect = 1.1e-30
Identity = 92/260 (35.38%), Postives = 134/260 (51.54%), Query Frame = 0


Query: 15  FHDLKKQASFFFKEKIKTARLALTDVTSAELLTEEAISG---NPDARTLSSISKAAFEVD 74
           F D KKQAS F ++K   ARL LTDVT AELL EE  +G   +PDA+T++ I++A+F+  
Sbjct: 6   FGDFKKQASSFIQDKYNVARLVLTDVTEAELLVEEVTNGDPSSPDAKTMTKIAEASFDTV 65

Query: 75  DYWRIVAILHKSFYELDPLIIMGKILNSSQFFRAIVSRAFTFKFLFIFSRLLKFEKKNWR 134
           +YWRIV +LH+          +GK                            + E KNWR
Sbjct: 66  EYWRIVDVLHRK---------IGKD---------------------------EREIKNWR 125

Query: 135 LCYNSLIILEHLLTHGPESVAEEFQSDKHVISQMGTFQYVDEKGFNWGISVRNKSERMLN 194
             Y ++++LE LL HGP  +  +F  D      + TFQYVD  GF+WG  V+ K++++  
Sbjct: 126 EAYKAMVLLEFLLMHGPIHLPHDFLYDLDHFRFLSTFQYVDNNGFDWGAQVQKKADQIQT 185

Query: 195 LLEKRSFLKEERDKARKLTRGILGFGSFSSRSKSQGVLEDCSSSIARYGKCNSNFNSSDN 254
           LL  +  L+E R KA K+T  I GFG+ ++ S S   L +  SS+      NS      +
Sbjct: 186 LLLGKEELREARLKALKITSQINGFGNSTTFSPSPNSLSNSFSSLK---TSNSTPTKRID 226

Query: 255 LNQEHQALSDQKTANPQGNQ 272
           L  E  +L D +    + +Q
Sbjct: 246 LISESYSLIDDENKLSEKDQ 226

[Close]

BLAST of CmoCh01G006230.1 vs. TAIR 10
Match: AT5G11710.1 (ENTH/VHS family protein )

HSP 1 Score: 57.4 bits (137), Expect = 2.7e-08
Identity = 42/158 (26.58%), Postives = 77/158 (48.73%), Query Frame = 0


Query: 128 KNWRLCYNSLIILEHLLTHGPESVAEEFQSDKHVISQMGTFQYVDEKGFNWGISVRNKSE 187
           K+WR  Y +L ++++L+++G E   +E     + IS + +F+YV+  G + GI+VR K+E
Sbjct: 77  KDWRYVYKALAVIDYLISNGSERAVDEIIEHTYQISSLTSFEYVEPNGKDVGINVRKKAE 136

Query: 188 RMLNLLEKRSFLKEERDKARKLTRGILGFGSFSSRSKS------QGVLEDCSSSIARYGK 247
            ++ LL  +  + E RDKA       +G  S     KS       G  +  SS+   Y  
Sbjct: 137 NIVALLNNKEKISEIRDKAVANRNKYVGLSSTGITYKSGSSASFGGSFQSGSSNFDSYKD 196

Query: 248 CNSNFNSSD---------NLNQEHQALSDQKTANPQGN 271
            +S  + +D          +  E Q+ + +K+ +  G+
Sbjct: 197 RDSREDKNDYESFQKSRRGVKTEEQSYTSKKSFSRYGS 234

The following BLAST results are available for this feature:

BLAST of CmoCh01G006230.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A7Z035	4.8e-10	33.98	Clathrin interactor 1 OS=Bos taurus OX=9913 GN=CLINT1 PE=2 SV=1	[more]
Q14677	4.8e-10	33.98	Clathrin interactor 1 OS=Homo sapiens OX=9606 GN=CLINT1 PE=1 SV=1	[more]
Q99KN9	4.8e-10	33.98	Clathrin interactor 1 OS=Mus musculus OX=10090 GN=Clint1 PE=1 SV=2	[more]
Q4V882	1.1e-09	33.86	Epsin-3 OS=Rattus norvegicus OX=10116 GN=Epn3 PE=1 SV=1	[more]
Q91W69	2.4e-09	33.07	Epsin-3 OS=Mus musculus OX=10090 GN=Epn3 PE=1 SV=1	[more]

BLAST of CmoCh01G006230.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GBK0	1.9e-163	89.05	clathrin interactor EPSIN 1 OS=Cucurbita moschata OX=3662 GN=LOC111452671 PE=4 S...	[more]
A0A6J1K6E8	3.4e-160	87.32	clathrin interactor EPSIN 1 OS=Cucurbita maxima OX=3661 GN=LOC111492730 PE=4 SV=...	[more]
A0A6J1DDE5	3.0e-124	72.65	clathrin interactor EPSIN 1 OS=Momordica charantia OX=3673 GN=LOC111019473 PE=4 ...	[more]
A0A5A7VQ46	3.1e-97	62.46	Clathrin interactor 1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27...	[more]
A0A5D3DE32	1.5e-96	62.18	Clathrin interactor 1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]

BLAST of CmoCh01G006230.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022949262.1	4.0e-163	89.05	clathrin interactor EPSIN 1 [Cucurbita moschata]	[more]
KAG7036924.1	1.8e-160	87.61	Epsin-2 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023523147.1	7.0e-160	88.18	clathrin interactor EPSIN 1 [Cucurbita pepo subsp. pepo]	[more]
XP_022997927.1	7.0e-160	87.32	clathrin interactor EPSIN 1 [Cucurbita maxima]	[more]
KAG6607239.1	1.6e-159	87.32	Epsin-2, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of CmoCh01G006230.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G46540.1	4.8e-66	45.61	ENTH/VHS family protein	[more]
AT1G08670.1	8.3e-34	37.50	ENTH/VHS family protein	[more]
AT3G23350.1	1.1e-30	35.38	ENTH/VHS family protein	[more]
AT5G11710.1	2.7e-08	26.58	ENTH/VHS family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 182..209
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 287..347
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 297..311
None	No IPR available	PANTHER	PTHR12276:SF99	EPSIN-2-LIKE	coord: 120..346 coord: 14..88
None	No IPR available	PANTHER	PTHR12276	EPSIN/ENT-RELATED	coord: 120..346 coord: 14..88
None	No IPR available	CDD	cd03571	ENTH	coord: 43..194 e-value: 3.68045E-39 score: 133.026
IPR013809	ENTH domain	SMART	SM00273	enth_2	coord: 71..203 e-value: 6.8E-7 score: 38.9
IPR013809	ENTH domain	PFAM	PF01417	ENTH	coord: 54..198 e-value: 6.2E-21 score: 74.7
IPR013809	ENTH domain	PROSITE	PS50942	ENTH	coord: 68..203 score: 19.275524
IPR008942	ENTH/VHS	GENE3D	1.25.40.90		coord: 37..219 e-value: 9.3E-32 score: 111.9
IPR008942	ENTH/VHS	SUPERFAMILY	48464	ENTH/VHS domain	coord: 21..203

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmoCh01G006230	CmoCh01G006230	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh01G006230.1:exon:4214	CmoCh01G006230.1:exon:4214	exon
CmoCh01G006230.1:exon:4213	CmoCh01G006230.1:exon:4213	exon
CmoCh01G006230.1:exon:4212	CmoCh01G006230.1:exon:4212	exon
CmoCh01G006230.1:exon:4211	CmoCh01G006230.1:exon:4211	exon
CmoCh01G006230.1:exon:4210	CmoCh01G006230.1:exon:4210	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh01G006230.1:cds	CmoCh01G006230.1:cds_5	CDS
CmoCh01G006230.1:cds	CmoCh01G006230.1:cds_4	CDS
CmoCh01G006230.1:cds	CmoCh01G006230.1:cds_3	CDS
CmoCh01G006230.1:cds	CmoCh01G006230.1:cds_2	CDS
CmoCh01G006230.1:cds	CmoCh01G006230.1:cds	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh01G006230.1:five_prime_utr	CmoCh01G006230.1:five_prime_utr	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmoCh01G006230.1	CmoCh01G006230.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006897	endocytosis
cellular_component	GO:0030125	clathrin vesicle coat
cellular_component	GO:0005768	endosome
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0030276	clathrin binding
molecular_function	GO:0005543	phospholipid binding