CmoCh01G005210.1 (mRNA) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh01G005210.1
Type	mRNA
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	CCT-alpha
Location	Cmo_Chr01: 2515403 .. 2524073 (-)
Sequence length	1919
RNA-Seq Expression	CmoCh01G005210.1
Synteny	CmoCh01G005210.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTCGCACCCAAAATGGTAAATCTTACAACTTTTCACCTCCATCTTATTGTTATGTTTTTTTAGCAAGATAGATCCTTCTTTTTTATAACACTTGCGGGTTCTTTTATTTATATTTTAAACTAGCGAGAGACAACGTGAATTACTCATTTGAGTTGTTTGGTGGGTTCAGTTGTAGCATGTCAAGCAGTTGCCAACATTGTGAAATCCTCGCTTGGACCTGTTGGCCTCGATAAGGTATTGCCTCACTTTCCAATTTCTTATACTATTTTGATATAGGTTCTCCTGATGACACTACTTCTTGTTTTAGCATTTTTGAGTCAAAATGCAACGAGTTTGTGTTTTGTATTCATTCTTCTAAGTCTTGATGAATTTTTATTGTACAGTGTATGTATTGTACTCTTAGCATAGAGAAGGAATGTAAAATTTCTAATTGTCTGCAAGTTTAGTAGCTTCCAACTTAGAGAAGGAATGTAACATTTCAAGTTAATTTTGATTATGTTTTGTATAAAGAAAGGGACTGAAACTGTGGTTCTTGCTGGCCATCTTAGCATAGCTCGATTGTTTATGAGATTGAAACAATTAGCTCAACTAGTTAATGCATACACCCTTGACCAAGAGGTCAATGATTCAAAACCCTCACCCCACATGTTGTTGAATTAGAAAAAGAAAAATATTTTCTAACATTCTCTTTTCTCATTTGGAAACCTCCCTGTCCTGTCTAATTATGGGCTTGGAGGATTTAATTTACGCTATTTATTTATAATTAAAAATATGTACCAGATGCTTGTGGATGACATTGGTGATGTTACAATCACTAATGATGGTGCAACTATTCTCAAGATGTTAGAAGTAGAGCATCCTGCTGCGAAGGTAGGCATATAGCCTTGTTGTTTTCATACATATGTTTAATGTCTTACAATTCTTATTTCTGTCTCTTTTGTGGCAAATTTTGATTTTATGCATTTAGGTGCTAGTGGAGTTGGCTGAACTTCAAGATCGAGAAGTTGGTGATGGCACAACTTCAGTGGTCATTGTAGCGGCTGAGTTGCTCAAGGTAAGAGTGCTCAATGTACTCAAAATTAAGAACTTATCATTTATTATCATGGACACCTAGAACTTCATTTTCCCCTTGTATCTTCTCAGAGAGCTAATGATTTGGTGAGAAACAAAATTCATCCAACTTCTATAATTAGTGGGTACAGAGTAAGCAACTCTTCTTTCTATTATTCCATTTTAGTGAAGTTTTGTTCTGTTTTTCTTTTGCTTAAGATGTCTGTAGCACTCATTTTCTATTTTTTGTTCTTTTTGAAGTTTTGATTTTAATATTTATATGCTTCAATATTTTTTGATGTTGGTAGCTTGCCATGAGGGAAGCATGCAAGTATGTCGAGGAAAAGTTGGCTGTAAAGGTGAGGCATTTCTCGTAAAATAGCTTTGCATAGTTGTTGAAGATATTATATTTAGAAATAGATTATGTAAAACTGTATGCATTCCGTTTCTGATGTGGAAGGACTTGGGTGCAGTGTTTTCCAATAGCCTTTTTCCTAGTGGGACACAATCCCAATTTAAATACAAAATCTGCACCAATCAAACAATGCGTAATCAAGCACTTTTACCACAAAAAAAGTTATGTTTAACTTTGTGTTGTTTTTTTTAATGAATAGGCTTTATAAGGTCCTTAACGTCGTCATTAATAATTGGAATAACTTTTTTATTTTTTGTCTTCAATGTTTCTTTCGTCTAGTTTTTTTTTTCTCCTAAAAGTAATTGGGTTGAGTTGGCGAGCTACTTTGTTTAGTTCAATTTCTGTATTCTCTCTGTTTTTTATTTTAATGATCCCTCCCCTTCCAATTTACATCAATTTGATCAAGTAATTTTTTAAGCTCCCTTGGTTGTGGAGTGGGCCTGAAGCCTCTTTGTATATCATTCTTCCGTATTTTTTACTAACAGAGTTTTGTGAAAAGTTTGGTTTCTTGTCCAAACAAAGACAGTTTCTGACATCTATTAATGTGGATGGTCAGGTTGAAAAGTTGGGAAAAGACTCACTTATTAACTGTGCTAAAACAAGCATGTCTTCCAAGTTGATTACGGGTGATAGTGACTTCTTTGCAAACATGGTAAGTTATTGGCTCCTGTATGTTACTAAGTTTGAGTACTTTATTTGAAGGTTCACTATCGTGTTTTTCAATTTATGTGGTTATCTTGAAATCTTTTATGTAAAATAATGTTGCCTGTGGTTGCCGACCAACTTTCATATAAAGTTTCTTTACCAAGTGTTCTTTATTTGGTTGCTTAAGTCTTGCATGTATCTGTGTCTCTAGGTTGTAGATGCTGTGCAAGCAGTCAAGATGACCAACGCAAGGGGAGAAGTTAAATACCCCATTAAGGTTTGTGACTTTTTGGTTTAGTTTCCCAATCAGGGTTTTGGATGAAATATTGTTCTTTTCCTTTTAAAATTGTTTTTTAGTTTAAGTTAGATAACGAAGATTTAGAATTGATGGTATGTGCTACAGTCAGATGTTTATTAATTACGTCTTTACCAACTTTTGGCTACTTTAGAGGAAGACCATTTAAACTTGGATTTATTCTAGTTTTTTTGCTATCCTTCGAAAATTTTCTTGCGAGAAAAATTTGTTTTTTTTTGTTTGGCCTTTAGGAAAGAGCACAATGAATTTTGGGATTTAGATTATTTCAAGGTTTCTTTGGGTTCCTCGTCTTCCTTGTCTATTACTTTTGTGCTGAAAACTATTGGGGCTTTTTGTCCCTTTGATTTCCTTGTGGTCTTTAGAGCTCAAGAAAATATGCTTTTGTGGTTTTGTGTTCAAGAAGGGCAATTCTTCGAGTCTATTCTGTTGCTTCTTATTGGAGAGAAATCAGAATTGTTTTCTTAGTGAGAGATGACCATTATATTTAGCGTTTTTGTCAACAACGAGAAAAAAGAATCTTCTTCCTCAGTTTTAATGCTCTCTCCCCTGTTGCAACTAGGCTCACATGGTGCCATCTTTCTCAACCCCTTTCCTAACATTCACGGCTTCTCCACTATCACAGAAGCTATATGGAGCTGTGAAAAGAGATCATTAGCTATTGATTGAAAAATCATCTAAATTAAGTGCATGCTATCATGGTGTAAAGCTAGATTTCTTGATAAGTATGCAAGTTAAGATAAGTATTTGTTGAACTAGAATTTAGTATTTTTGTTTTCTAATTTGTGTTTCAGGGAATCAACATTTTGAAAGCTCATGGAAAGAGTGCAAAAGATAGCTACCTGTTGAATGGTTATGCTCTAAATAGTGGTCGAGCAGCTCAAGGAATGCCAATTAGAGTTGCACCTGCAAGGATTGCTTGCCTTGACTTCAATCTCCAAAAGACAAAAATGCAGCTTGGCGTACAAGTTCTTGTCTCAGACCCTAGGGAACTTGAGAAAATTCGTCAGAGGTATTTGATAGATCTCAAATTGCTTTTAACCATGATGTACCCATAAGTTCTATTGAGTCGAATTATGGCTTTTTGTTCCTAAAGATTCTCTTAACTGCCATTTCTATTTGGAATTTCCACACGTTACAGTAGATGCCTATCTTTTCGAAATCTTCTAAGTAGTTGCCTTAATCAAAATCTACAATTCTTGTACTGTTTTAAACTTTTTGTTTGGCAATTATGGCACATCTTGGTTACAGGGAGTCTGATATGATGAAAGAACGCATTGAAAAGCTTCTGAAAGCTGGGGCAAATGTTATTCTCACCACGAAAGGGATTGATGACATGGCACTGAAGGCAAGCTTCTTTAGTTTTTGTTCTCATTTATGAGATGACTGCTTTCTGCTATACCCTACTAATTAGTGTCTACTATTTGTCTGGGATTATTTTCTGGTGTCTATTATGTTAGCTGGTTTGTGTTTAAATGTTGTGCACTCATTCAAGATAAATGTAATGCATTCCTGGATATCTAATGTAGAACCTTCCATATTGTGTCTGTTTATGTGGGCCTGAGTGGATATGATTCTCTTGTTTGTACTTGTGTTGATTTTAATTGATTCTTGGAGAACATTAAACAATGTTAGGAAAACATTTTGGATAATTTTTTGAAAATAAGTTAGTACCCCATTTAAACATTATGTTTTTGAGTTCTTCTGTCATTACATTATTTGAGTTTGGGAAATGGAATGTTTTCCTGTAAATGGATTTTCTGATTTTATGAGGTTTATGTTGTTCTGTTGTATTTGTATTGCCTTTGATGTATAAATTTTTTTAGTAATTTGTTGGTATAATTTTTAACTTCTTTCCAAGTACATTTTTATTTCTATGACAGTATTTTGTAGAGGCGGGGGCTATTGCTGTTAGGCGAGTAAAAAAGGAGGACATGCGCCATGTTGCCAAGGCTACTGGAGCAACCATGGTATGTAAATACCCTTTCTTATGTATCAACTGTCCATTTCATTTAATCTTGCAGTTTGTTTCATTGTAGATGGTCTCAAATATTGGTCGAGGGCTTTCATGTATTTTCTACACTATGTTATATGTGGACCGCACGGTTATTATTGCTTGTGCTCATAGCAGATTGCTAAATAGAAGGCTTTGATTTGTCGTTTTCGTTCCATTATATTATGCATAAAAACTCAAGTATTTTCATAATTCTCTTTGCATGCTTAGAACATTTTTTTTGTGTATTGCACTTTCCTTAGTGTTTCGGGGAAGTTTATATTAAGCTTTTGAACTGTGGGTTCGCTATCGTGGGAGGAGTGGATGGAGAGAAGTAGTAGAAATTTTAGAGGGGTGGAGAGGTCTATTGACCTTCAACAAAGAGGCAGAGTCAAAACCACTCAAGGTTGATAATTTCTGTTGATGAAATTGGTGAGAAGAAAATTCATTGGGGTTTTGTCCACGTGAAGAGGCATACTGATGAACATTATCGTCGAGTCTGTAGTTAGTGGCTTGGATTTTGTGAATAAATAATAGGAAGTTTGGATTATGTTTCACATTATTTTAGATAACGAGTTTGCTGTTGCTGGCTGCTACAGAACTTTACTTTTTTTATTTAAACAAAATGATATATTATATAACAAATAAGTATATAACTTTTTTTTTTTTTTCAAAACTAATGCGACAATGTACACCTAACTGAAAATAATGTACTTGATGAATTTTGTTCAATTTGGTTCAACATCTGTTATGTTGAATTGCTAACTGAATCAATATAGTTAACCATATGGAATCTACTTGTTTTGGTTTAGCTTTTTACACTCCTAGGACCTATGGTTGTCTCGTTTAGCAGAGGGTAGTGTTAGAGAGAGGAGGGCATTCAATTATTTGTGCTGTGCCTATGTGAGCTTTTTTCAGTGAAATAAAGCTTCTGATACTCTTTTTATCTAAGCTGCTGATCATGTATAGGACTTTCTACGCCACTTTGTTATACAATGTCTAATATCTTATGCCTACAGCTTTTGCTGAGCCAGAAATCAATTATTGTTAGTATTTGTTATTAATTGTTATCCTTCCTGTTCATGGGTCTGTAGGTTTCAACATTTGCTGACATGGAGGGTGAGGAAACGTTTGAGGCATCACTTCTTGGATATGCTGATGAGGTTGTAGAGGAAAGAATTTCTGATGATGATGTCGTTTTGATAAAGGGCGCTAAAACTACTAGTGCGGTAAGTGACTTTGTCCAAGCTCAAGCTGTTTGGAAGCTACTTGTCAAACCTAATCTTATCAAATTACTAATTCTTTAAGTAATGGTGTTAGACTGTTTGGTTGGATTTCTAACCAAGATACATTGTTCAAATTATTACCTGCGGTTAATAATTTACTTGAAAATGGGTTTGAAAATAGATAAGATTTTCTGTGATTGCTGAACAATGGGAAGTAATTTAATTATTATTTACATTGTGCATTATTTTTCTCTGTTTCTGAGATATAATCTGATTTTTAAAAAATATTATTCTTTAGGTCTCCTTGATCCTTAGAGGTGCGAATGACTATATGCTCGATGAGATGGAGAGAGCTTTGCATGATGCATTATCTATTGTCAAAAGGACTCTTGAGTCCAATACGGTAATGTTTGGTTTTTTTTTGGAGTTCAGTATCCTGTGTAATCTTATTCTCTCGATTGACGGCATGCTGGATGTTCACTAACTGCTTATATTCGATTAATGGAACAAAAAATAATAAAAGAACCTCAAAAGCCAAGGGTGATCAAAGAACTTTCCAATGGAACATCAACTGAGGAGAATGAGTAAAAGAAAGCCCTATATAACGTACTCCTAAGAGAAAAAACAAATAATATCCCCACTTTCCCAGATGTTTTTATCTCTCCCTAAAGCTTCTCCAAAGTTAAATTTCCAAACGGGACCTTAATCACATTAGTTCAAAATACCTCTCTTTTATGCTGTTTTTGGTTCAATTACTACCAACCAATTCCTTGTTTTTGACAGGCTTAAGTTAAACAGATAATTGGATGATATAGATTGGCAGAAAGAATTAGAAACTTATATTTGTTCATTATTCAGTTGCCCAATTACCTATTTATGTCGTTGATTGTTTTGATCATACAGGTGGTAGCAGGTGGTGGTGCAGTTGAATCTGCATTGTCCGTGTATTTGGAATATCTTGCAACAACTCTAGGCTCCCGCGAGCAGTTGGCGATTGCTGAATTTGCAGAATCTTTATTAATTATTCCAAAGGTATATAGAGATAATGGAGCAAATTTCGGAAATGTTTTTGCGTCATGATTGTCACTTGCATGTTCTTTTTGTAGGTACTTGCTGTTAATGCTGCTAAGGACGCTACTGAGTTAGTTGCCAAACTACGGGCTTACCACCACACAGCACAAACCAAGGCAGACAAGAAGCATCTGTCTAGGTATTTTAATTATTGCAGTAGTATGATCATCTGCCCTGCTAATTTTTCTTCTTCGGGAAGAAGCATTTTTTTATCTTACACCACGAATTTGCATCATACTTTTTTTCATTATTGAAAAAAAGCCTAAGAAGCACAGACATCGACACGACATGACACAGTATTGTGACTCACCAATTTTTTTAAAAAGTATTCCATAGGGTTCAGCATAATAGTTAAAATATGCTGTCTCTTAATGGTTTCTTTTTTCGTTTTCCTTTTCCTTTTTCTTTACCATTTTATTTTTCATTTCGAGGGTTTTTCTTTGAGAGGAGCGATTTAGAAGAAAGTAGAGGGGGTTTCATTTAGTTAATTGGAATGCTTTGTCGGAACTCTAAAACGTTGGTTTGGAGATCCAATAATTTTGAAAACAACAATATAGCCCTCCTCTTGAGGTGGCTGGGATTCTACTGAGATGAGGCATAGAGAGGGATTGGAGAGACTGCGCGTGCGGGGCTTTTATTGTTTTTTAGCATATGATTTTTCTGTTGGTTGGTGAAGGCTTTAGTAAAATAGTAGACAATAACCGTAGATATTTTGTCTTGATTTATAGTGCGCTGTCACTCACTAAATGAGTGTGAATTGGACATTACTGTCGAGTTTTATTCTTTAACTAAGATTAGATTGGTCATCAAAATATGTGGTGGTGACAACTATAACTCACCTCTTTTCTTTTTTTGGTTTCTGTTTGAGTTGGGATTACACTGGTTTGTTTTAGCTTGAACCTGTTTTCATTAGTATGTTTATTGCTTTTGCTTCCATTCTTCGAGCAGCATGGGACTAGATCTATCCAACGGAACCATACGCAATAACTTGGAAGCTGGTGTCATTGAACCAGCCATGAGCAAAGTCAAGATAATTCAGGTAAATGGCTTTTAAATTTGCCTATATATTTATTCTTTAGCAACCTTCTTCATACTAATTTTCCTCCCAAAATCTTCCAGTTTGCAACTGAAGCAGCGATTACTATTCTTCGTATTGATGACATGATCAAGCTTTACAAGGATGAAACTCAAAATGAGGAGTAATAGGGTGTTTTTTCATGATTCTGGATGGAAGATTACTGGCATTGATATTTTGAATAGGTAGCCATCCTGCTCAGACTTGAGTTTATTATTATAAAGTAGATTTGTATTCAGGGCATTTCTATCAACTGTGTTCTTTATATAGACAATTCTGAGAGCTACTGATCCTCGGCATCTTTTGTTGCCGGTGGGTCTTTTTGGAGAAATTTTGGTCACCCTATTTAGAAATGTGTTTTCCTGTAATTTTTAACACTGATTTTGGATTTAGTGGTGTGTTAATATGTTTGAGTGGTCTGTTATGGAAATCCTTTAGAATAGTGCCTTTGATTCAGTGTCATTTTAGTAATTAAAACGTTCGATCGATGTTCGTTCCCCATACGTATCGTTGCATCACACCTGCATTTTGGCTTCAGCTGTTTGGTCCTTACTTTCTACACAGTAGTTGTCTAGTTTGCCTACATATTATGTGAGTTGTTCCTTCATTTAGTTTTTTTAAAACGTTTTTACATTCATTAAAATATTTTTGTTCAGGTACATTTAGAAAGAAGAGTGAAGAGCATGAGTTCTCAAAGAAGTAATTTACAAAATCTCTCTACCCTTTCGTTTCGTTACGCTCTTACTTGGTTTGTTCGTGTGGAATTTATCACCTCGCCCTTTTAGTTTCTATGTTAAATTGCATATTTAGTTCCCGAACATTTAAGTTTGTGCCTATTTTGTCCTTGAATTTTTATGGATTCTTTAAATGTTGAGAAGTG

mRNA sequence

ATGTTCGCACCCAAAATGGTAAATCTTACAACTTTTCACCTCCATCTTATTGTTATTTGTTTGGTGGGTTCAGTTGTAGCATGTCAAGCAGTTGCCAACATTGTGAAATCCTCGCTTGGACCTGTTGGCCTCGATAAGATGCTTGTGGATGACATTGGTGATGTTACAATCACTAATGATGGTGCAACTATTCTCAAGATGTTAGAAGTAGAGCATCCTGCTGCGAAGGTGCTAGTGGAGTTGGCTGAACTTCAAGATCGAGAAGTTGGTGATGGCACAACTTCAGTGGTCATTGTAGCGGCTGAGTTGCTCAAGAGAGCTAATGATTTGGTGAGAAACAAAATTCATCCAACTTCTATAATTAGTGGGTACAGACTTGCCATGAGGGAAGCATGCAAGTATGTCGAGGAAAAGTTGGCTGTAAAGGTTGAAAAGTTGGGAAAAGACTCACTTATTAACTGTGCTAAAACAAGCATGTCTTCCAAGTTGATTACGGGTGATAGTGACTTCTTTGCAAACATGGTTGTAGATGCTGTGCAAGCAGTCAAGATGACCAACGCAAGGGGAGAAGTTAAATACCCCATTAAGGGAATCAACATTTTGAAAGCTCATGGAAAGAGTGCAAAAGATAGCTACCTGTTGAATGGTTATGCTCTAAATAGTGGTCGAGCAGCTCAAGGAATGCCAATTAGAGTTGCACCTGCAAGGATTGCTTGCCTTGACTTCAATCTCCAAAAGACAAAAATGCAGCTTGGCGTACAAGTTCTTGTCTCAGACCCTAGGGAACTTGAGAAAATTCGTCAGAGGGAGTCTGATATGATGAAAGAACGCATTGAAAAGCTTCTGAAAGCTGGGGCAAATGTTATTCTCACCACGAAAGGGATTGATGACATGGCACTGAAGTATTTTGTAGAGGCGGGGGCTATTGCTGTTAGGCGAGTAAAAAAGGAGGACATGCGCCATGTTGCCAAGGCTACTGGAGCAACCATGGTTTCAACATTTGCTGACATGGAGGGTGAGGAAACGTTTGAGGCATCACTTCTTGGATATGCTGATGAGGTTGTAGAGGAAAGAATTTCTGATGATGATGTCGTTTTGATAAAGGGCGCTAAAACTACTAGTGCGGTCTCCTTGATCCTTAGAGGTGCGAATGACTATATGCTCGATGAGATGGAGAGAGCTTTGCATGATGCATTATCTATTGTCAAAAGGACTCTTGAGTCCAATACGGTGGTAGCAGGTGGTGGTGCAGTTGAATCTGCATTGTCCGTGTATTTGGAATATCTTGCAACAACTCTAGGCTCCCGCGAGCAGTTGGCGATTGCTGAATTTGCAGAATCTTTATTAATTATTCCAAAGGTACTTGCTGTTAATGCTGCTAAGGACGCTACTGAGTTAGTTGCCAAACTACGGGCTTACCACCACACAGCACAAACCAAGGCAGACAAGAAGCATCTGTCTAGCATGGGACTAGATCTATCCAACGGAACCATACGCAATAACTTGGAAGCTGGTGTCATTGAACCAGCCATGAGCAAAGTCAAGATAATTCAGTTTGCAACTGAAGCAGCGATTACTATTCTTCGTATTGATGACATGATCAAGCTTTACAAGGATGAAACTCAAAATGAGGAGTAATAGGGTGTTTTTTCATGATTCTGGATGGAAGATTACTGGCATTGATATTTTGAATAGGTACATTTAGAAAGAAGAGTGAAGAGCATGAGTTCTCAAAGAAGTAATTTACAAAATCTCTCTACCCTTTCGTTTCGTTACGCTCTTACTTGGTTTGTTCGTGTGGAATTTATCACCTCGCCCTTTTAGTTTCTATGTTAAATTGCATATTTAGTTCCCGAACATTTAAGTTTGTGCCTATTTTGTCCTTGAATTTTTATGGATTCTTTAAATGTTGAGAAGTG

Coding sequence (CDS)

ATGTTCGCACCCAAAATGGTAAATCTTACAACTTTTCACCTCCATCTTATTGTTATTTGTTTGGTGGGTTCAGTTGTAGCATGTCAAGCAGTTGCCAACATTGTGAAATCCTCGCTTGGACCTGTTGGCCTCGATAAGATGCTTGTGGATGACATTGGTGATGTTACAATCACTAATGATGGTGCAACTATTCTCAAGATGTTAGAAGTAGAGCATCCTGCTGCGAAGGTGCTAGTGGAGTTGGCTGAACTTCAAGATCGAGAAGTTGGTGATGGCACAACTTCAGTGGTCATTGTAGCGGCTGAGTTGCTCAAGAGAGCTAATGATTTGGTGAGAAACAAAATTCATCCAACTTCTATAATTAGTGGGTACAGACTTGCCATGAGGGAAGCATGCAAGTATGTCGAGGAAAAGTTGGCTGTAAAGGTTGAAAAGTTGGGAAAAGACTCACTTATTAACTGTGCTAAAACAAGCATGTCTTCCAAGTTGATTACGGGTGATAGTGACTTCTTTGCAAACATGGTTGTAGATGCTGTGCAAGCAGTCAAGATGACCAACGCAAGGGGAGAAGTTAAATACCCCATTAAGGGAATCAACATTTTGAAAGCTCATGGAAAGAGTGCAAAAGATAGCTACCTGTTGAATGGTTATGCTCTAAATAGTGGTCGAGCAGCTCAAGGAATGCCAATTAGAGTTGCACCTGCAAGGATTGCTTGCCTTGACTTCAATCTCCAAAAGACAAAAATGCAGCTTGGCGTACAAGTTCTTGTCTCAGACCCTAGGGAACTTGAGAAAATTCGTCAGAGGGAGTCTGATATGATGAAAGAACGCATTGAAAAGCTTCTGAAAGCTGGGGCAAATGTTATTCTCACCACGAAAGGGATTGATGACATGGCACTGAAGTATTTTGTAGAGGCGGGGGCTATTGCTGTTAGGCGAGTAAAAAAGGAGGACATGCGCCATGTTGCCAAGGCTACTGGAGCAACCATGGTTTCAACATTTGCTGACATGGAGGGTGAGGAAACGTTTGAGGCATCACTTCTTGGATATGCTGATGAGGTTGTAGAGGAAAGAATTTCTGATGATGATGTCGTTTTGATAAAGGGCGCTAAAACTACTAGTGCGGTCTCCTTGATCCTTAGAGGTGCGAATGACTATATGCTCGATGAGATGGAGAGAGCTTTGCATGATGCATTATCTATTGTCAAAAGGACTCTTGAGTCCAATACGGTGGTAGCAGGTGGTGGTGCAGTTGAATCTGCATTGTCCGTGTATTTGGAATATCTTGCAACAACTCTAGGCTCCCGCGAGCAGTTGGCGATTGCTGAATTTGCAGAATCTTTATTAATTATTCCAAAGGTACTTGCTGTTAATGCTGCTAAGGACGCTACTGAGTTAGTTGCCAAACTACGGGCTTACCACCACACAGCACAAACCAAGGCAGACAAGAAGCATCTGTCTAGCATGGGACTAGATCTATCCAACGGAACCATACGCAATAACTTGGAAGCTGGTGTCATTGAACCAGCCATGAGCAAAGTCAAGATAATTCAGTTTGCAACTGAAGCAGCGATTACTATTCTTCGTATTGATGACATGATCAAGCTTTACAAGGATGAAACTCAAAATGAGGAGTAA

Protein sequence

MFAPKMVNLTTFHLHLIVICLVGSVVACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVEEKLAVKVEKLGKDSLINCAKTSMSSKLITGDSDFFANMVVDAVQAVKMTNARGEVKYPIKGINILKAHGKSAKDSYLLNGYALNSGRAAQGMPIRVAPARIACLDFNLQKTKMQLGVQVLVSDPRELEKIRQRESDMMKERIEKLLKAGANVILTTKGIDDMALKYFVEAGAIAVRRVKKEDMRHVAKATGATMVSTFADMEGEETFEASLLGYADEVVEERISDDDVVLIKGAKTTSAVSLILRGANDYMLDEMERALHDALSIVKRTLESNTVVAGGGAVESALSVYLEYLATTLGSREQLAIAEFAESLLIIPKVLAVNAAKDATELVAKLRAYHHTAQTKADKKHLSSMGLDLSNGTIRNNLEAGVIEPAMSKVKIIQFATEAAITILRIDDMIKLYKDETQNEE

Homology

[Close]

BLAST of CmoCh01G005210.1 vs. ExPASy Swiss-Prot
Match: P28769 (T-complex protein 1 subunit alpha OS=Arabidopsis thaliana OX=3702 GN=CCT1 PE=1 SV=1)

HSP 1 Score: 896.0 bits (2314), Expect = 2.2e-259
Identity = 473/522 (90.61%), Postives = 506/522 (96.93%), Query Frame = 0


Query: 24  SVVACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAE 83
           +V+ACQAV+NIVK+SLGPVGLDKMLVDDIGDVTITNDGATIL+MLEVEHPAAKVLVELAE
Sbjct: 24  NVMACQAVSNIVKTSLGPVGLDKMLVDDIGDVTITNDGATILRMLEVEHPAAKVLVELAE 83

Query: 84  LQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVEEKLAVKV 143
           LQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMRE+CKY+EEKL  KV
Sbjct: 84  LQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMRESCKYIEEKLVTKV 143

Query: 144 EKLGKDSLINCAKTSMSSKLITGDSDFFANMVVDAVQAVKMTNARGEVKYPIKGINILKA 203
           EKLGK  LINCAKTSMSSKLI+GDSDFFAN+VV+AV +VKMTN RGE+KYPIKGINILKA
Sbjct: 144 EKLGKVPLINCAKTSMSSKLISGDSDFFANLVVEAVLSVKMTNQRGEIKYPIKGINILKA 203

Query: 204 HGKSAKDSYLLNGYALNSGRAAQGMPIRVAPARIACLDFNLQKTKMQLGVQVLVSDPREL 263
           HG+SA+DSYLLNGYALN+GRAAQGMP+RV+PA+IACLDFNLQKTKMQLGVQV+V+DPREL
Sbjct: 204 HGQSARDSYLLNGYALNTGRAAQGMPLRVSPAKIACLDFNLQKTKMQLGVQVVVNDPREL 263

Query: 264 EKIRQRESDMMKERIEKLLKAGANVILTTKGIDDMALKYFVEAGAIAVRRVKKEDMRHVA 323
           EKIRQRE+DM KERIEKLLKAGANVILTTKGIDDMALKYFVEAGAIAVRRV+KEDMRHVA
Sbjct: 264 EKIRQREADMTKERIEKLLKAGANVILTTKGIDDMALKYFVEAGAIAVRRVRKEDMRHVA 323

Query: 324 KATGATMVSTFADMEGEETFEASLLGYADEVVEERISDDDVVLIKGAKTTSAVSLILRGA 383
           KATGAT+V+TFADMEGEETF+ + LG ADEVVEERI+DDDV+LIKG KT+SAVSLILRGA
Sbjct: 324 KATGATLVTTFADMEGEETFDPAHLGSADEVVEERIADDDVILIKGTKTSSAVSLILRGA 383

Query: 384 NDYMLDEMERALHDALSIVKRTLESNTVVAGGGAVESALSVYLEYLATTLGSREQLAIAE 443
           NDYMLDEMERALHDAL IVKRTLESNTVVAGGGAVESALSVYLE+LATTLGSREQLAIAE
Sbjct: 384 NDYMLDEMERALHDALCIVKRTLESNTVVAGGGAVESALSVYLEHLATTLGSREQLAIAE 443

Query: 444 FAESLLIIPKVLAVNAAKDATELVAKLRAYHHTAQTKADKKHLSSMGLDLSNGTIRNNLE 503
           FA++LLIIPKVLAVNAAKDATELVAKLRAYHHTAQTKADKKH SSMGLDL NGTIRNNLE
Sbjct: 444 FADALLIIPKVLAVNAAKDATELVAKLRAYHHTAQTKADKKHYSSMGLDLVNGTIRNNLE 503

Query: 504 AGVIEPAMSKVKIIQFATEAAITILRIDDMIKLYKDETQNEE 546
           AGVIEPAMSKVKIIQFATEAAITILRIDDMIKL KDE+Q EE
Sbjct: 504 AGVIEPAMSKVKIIQFATEAAITILRIDDMIKLVKDESQGEE 545

[Close]

BLAST of CmoCh01G005210.1 vs. ExPASy Swiss-Prot
Match: P17987 (T-complex protein 1 subunit alpha OS=Homo sapiens OX=9606 GN=TCP1 PE=1 SV=1)

HSP 1 Score: 686.0 bits (1769), Expect = 3.4e-196
Identity = 353/521 (67.75%), Postives = 444/521 (85.22%), Query Frame = 0


Query: 24  SVVACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAE 83
           +V+A  ++ANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILK+LEVEHPAAKVL ELA+
Sbjct: 21  NVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHPAAKVLCELAD 80

Query: 84  LQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVEEKLAVKV 143
           LQD+EVGDGTTSVVI+AAELLK A++LV+ KIHPTS+ISGYRLA +EA +Y+ E L V  
Sbjct: 81  LQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLACKEAVRYINENLIVNT 140

Query: 144 EKLGKDSLINCAKTSMSSKLITGDSDFFANMVVDAVQAVKMTNARGEVKYPIKGINILKA 203
           ++LG+D LIN AKTSMSSK+I  + DFFANMVVDAV A+K T+ RG+ +YP+  +NILKA
Sbjct: 141 DELGRDCLINAAKTSMSSKIIGINGDFFANMVVDAVLAIKYTDIRGQPRYPVNSVNILKA 200

Query: 204 HGKSAKDSYLLNGYALNSGRAAQGMPIRVAPARIACLDFNLQKTKMQLGVQVLVSDPREL 263
           HG+S  +S L++GYALN    +QGMP R+  A+IACLDF+LQKTKM+LGVQV+++DP +L
Sbjct: 201 HGRSQMESMLISGYALNCVVGSQGMPKRIVNAKIACLDFSLQKTKMKLGVQVVITDPEKL 260

Query: 264 EKIRQRESDMMKERIEKLLKAGANVILTTKGIDDMALKYFVEAGAIAVRRVKKEDMRHVA 323
           ++IRQRESD+ KERI+K+L  GANVILTT GIDDM LKYFVEAGA+AVRRV K D++ +A
Sbjct: 261 DQIRQRESDITKERIQKILATGANVILTTGGIDDMCLKYFVEAGAMAVRRVLKRDLKRIA 320

Query: 324 KATGATMVSTFADMEGEETFEASLLGYADEVVEERISDDDVVLIKGAKTTSAVSLILRGA 383
           KA+GAT++ST A++EGEETFEA++LG A+EVV+ERI DD+++LIK  K  ++ S+ILRGA
Sbjct: 321 KASGATILSTLANLEGEETFEAAMLGQAEEVVQERICDDELILIKNTKARTSASIILRGA 380

Query: 384 NDYMLDEMERALHDALSIVKRTLESNTVVAGGGAVESALSVYLEYLATTLGSREQLAIAE 443
           ND+M DEMER+LHDAL +VKR LES +VV GGGAVE+ALS+YLE  AT++GSREQLAIAE
Sbjct: 381 NDFMCDEMERSLHDALCVVKRVLESKSVVPGGGAVEAALSIYLENYATSMGSREQLAIAE 440

Query: 444 FAESLLIIPKVLAVNAAKDATELVAKLRAYHHTAQTKADKKHLSSMGLDLSNGTIRNNLE 503
           FA SLL+IP  LAVNAA+D+T+LVAKLRA+H+ AQ   ++K+L  +GLDLSNG  R+N +
Sbjct: 441 FARSLLVIPNTLAVNAAQDSTDLVAKLRAFHNEAQVNPERKNLKWIGLDLSNGKPRDNKQ 500

Query: 504 AGVIEPAMSKVKIIQFATEAAITILRIDDMIKLYKDETQNE 545
           AGV EP + KVK ++FATEAAITILRIDD+IKL+ +   ++
Sbjct: 501 AGVFEPTIVKVKSLKFATEAAITILRIDDLIKLHPESKDDK 541

[Close]

BLAST of CmoCh01G005210.1 vs. ExPASy Swiss-Prot
Match: P18279 (T-complex protein 1 subunit alpha OS=Cricetulus griseus OX=10029 GN=TCP1 PE=2 SV=1)

HSP 1 Score: 684.5 bits (1765), Expect = 9.9e-196
Identity = 355/522 (68.01%), Postives = 446/522 (85.44%), Query Frame = 0


Query: 24  SVVACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAE 83
           +V+A  ++ANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILK+LEVEHPAAKVL ELA+
Sbjct: 21  NVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHPAAKVLCELAD 80

Query: 84  LQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVEEKLAVKV 143
           LQD+EVGDGTTSVVI+AAELLK A++LV+ KIHPTS+ISGYRLA +EA +Y+ E L +  
Sbjct: 81  LQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLACKEAVRYISENLIINT 140

Query: 144 EKLGKDSLINCAKTSMSSKLITGDSDFFANMVVDAVQAVKMTNARGEVKYPIKGINILKA 203
           ++LG+D LIN AKTSMSSK+I  + DFFANMVVDAV AVK T+ RG+ +YP+  +NILKA
Sbjct: 141 DELGRDCLINAAKTSMSSKIIGINGDFFANMVVDAVLAVKYTDLRGQPRYPVNSVNILKA 200

Query: 204 HGKSAKDSYLLNGYALNSGRAAQGMPIRVAPARIACLDFNLQKTKMQLGVQVLVSDPREL 263
           HG+S  +S L+NGYALN    +QGMP R+  A+IACLDF+LQKTKM+LGVQV+++DP +L
Sbjct: 201 HGRSQVESMLINGYALNCVVGSQGMPKRIVNAKIACLDFSLQKTKMKLGVQVVITDPEKL 260

Query: 264 EKIRQRESDMMKERIEKLLKAGANVILTTKGIDDMALKYFVEAGAIAVRRVKKEDMRHVA 323
           ++IRQRESD+ KERIEK+L  GANVILTT GIDDM LKYFVEAGA+AVRRV K D++ +A
Sbjct: 261 DQIRQRESDITKERIEKILATGANVILTTGGIDDMCLKYFVEAGAMAVRRVLKRDLKRIA 320

Query: 324 KATGATMVSTFADMEGEETFEASLLGYADEVVEERISDDDVVLIKGAKTTSAVSLILRGA 383
           KA+GA+++ST A++EGEETFEA++LG A+EVV+ERI DD+++LIK  K  ++ S+ILRGA
Sbjct: 321 KASGASILSTLANLEGEETFEATMLGQAEEVVQERICDDELILIKNTKARTSASIILRGA 380

Query: 384 NDYMLDEMERALHDALSIVKRTLESNTVVAGGGAVESALSVYLEYLATTLGSREQLAIAE 443
           ND+M DEMER+LHDAL +VKR LES +VV GGGAVE+ALS+YLE  AT++GSREQLAIAE
Sbjct: 381 NDFMCDEMERSLHDALCVVKRVLESKSVVPGGGAVEAALSIYLENYATSMGSREQLAIAE 440

Query: 444 FAESLLIIPKVLAVNAAKDATELVAKLRAYHHTAQTKADKKHLSSMGLDLSNGTIRNNLE 503
           FA SLL+IP  LAVNAA+D+T+LVAKLRA+H+ AQ   ++K+L  +GLDL NG  R+N +
Sbjct: 441 FARSLLVIPNTLAVNAAQDSTDLVAKLRAFHNEAQVNPERKNLKWIGLDLINGKPRDNKQ 500

Query: 504 AGVIEPAMSKVKIIQFATEAAITILRIDDMIKLYKDETQNEE 546
           AGV EP + KVK ++FATEAAITILRIDD+IKL+  ET++++
Sbjct: 501 AGVFEPTIVKVKSLKFATEAAITILRIDDLIKLH-PETKDDK 541

[Close]

BLAST of CmoCh01G005210.1 vs. ExPASy Swiss-Prot
Match: Q4R5G2 (T-complex protein 1 subunit alpha OS=Macaca fascicularis OX=9541 GN=TCP1 PE=2 SV=1)

HSP 1 Score: 683.3 bits (1762), Expect = 2.2e-195
Identity = 352/521 (67.56%), Postives = 443/521 (85.03%), Query Frame = 0


Query: 24  SVVACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAE 83
           +V+A  ++ANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILK+LEVEHPAAKVL ELA+
Sbjct: 21  NVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHPAAKVLCELAD 80

Query: 84  LQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVEEKLAVKV 143
           LQD+EVGDGTTSVVI+AAELLK A++L + KIHPTS+ISGYRLA +EA +Y+ E L V  
Sbjct: 81  LQDKEVGDGTTSVVIIAAELLKNADELGKQKIHPTSVISGYRLACKEAVRYINENLIVNT 140

Query: 144 EKLGKDSLINCAKTSMSSKLITGDSDFFANMVVDAVQAVKMTNARGEVKYPIKGINILKA 203
           ++LG+D LIN AKTSMSSK+I  + DFFANMVVDAV A+K T+ RG+ +YP+  +NILKA
Sbjct: 141 DELGRDCLINAAKTSMSSKIIGINGDFFANMVVDAVLAIKYTDTRGQPRYPVNSVNILKA 200

Query: 204 HGKSAKDSYLLNGYALNSGRAAQGMPIRVAPARIACLDFNLQKTKMQLGVQVLVSDPREL 263
           HG+S  +S L++GYALN    +QGMP R+  A+IACLDF+LQKTKM+LGVQV+++DP +L
Sbjct: 201 HGRSQMESKLISGYALNCVVGSQGMPKRIVNAKIACLDFSLQKTKMKLGVQVVITDPEKL 260

Query: 264 EKIRQRESDMMKERIEKLLKAGANVILTTKGIDDMALKYFVEAGAIAVRRVKKEDMRHVA 323
           ++IRQRESD+ KERI+K+L  GANVILTT GIDDM LKYFVEAGA+AVRRV K D++ +A
Sbjct: 261 DQIRQRESDITKERIQKILATGANVILTTGGIDDMCLKYFVEAGAMAVRRVLKRDLKRIA 320

Query: 324 KATGATMVSTFADMEGEETFEASLLGYADEVVEERISDDDVVLIKGAKTTSAVSLILRGA 383
           KA+GAT++ST A++EGEETFEA++LG A+EVV+ERI DD+++LIK  K  ++ S+ILRGA
Sbjct: 321 KASGATILSTLANLEGEETFEAAMLGQAEEVVQERICDDELILIKNTKARTSASIILRGA 380

Query: 384 NDYMLDEMERALHDALSIVKRTLESNTVVAGGGAVESALSVYLEYLATTLGSREQLAIAE 443
           ND+M DEMER+LHDAL +VKR LES +VV GGGAVE+ALS+YLE  AT++GSREQLAIAE
Sbjct: 381 NDFMCDEMERSLHDALCVVKRVLESKSVVPGGGAVEAALSIYLENYATSMGSREQLAIAE 440

Query: 444 FAESLLIIPKVLAVNAAKDATELVAKLRAYHHTAQTKADKKHLSSMGLDLSNGTIRNNLE 503
           FA SLL+IP  LAVNAA+D+T+LVAKLRA+H+ AQ   ++K+L  +GLDLSNG  R+N +
Sbjct: 441 FARSLLVIPNTLAVNAAQDSTDLVAKLRAFHNEAQVNPERKNLKWIGLDLSNGKPRDNKQ 500

Query: 504 AGVIEPAMSKVKIIQFATEAAITILRIDDMIKLYKDETQNE 545
           AGV EP + KVK ++FATEAAITILRIDD+IKL+ +   ++
Sbjct: 501 AGVFEPTIVKVKSLKFATEAAITILRIDDLIKLHPESKDDK 541

[Close]

BLAST of CmoCh01G005210.1 vs. ExPASy Swiss-Prot
Match: Q9XT06 (T-complex protein 1 subunit alpha OS=Monodelphis domestica OX=13616 GN=TCP1 PE=2 SV=1)

HSP 1 Score: 682.6 bits (1760), Expect = 3.8e-195
Identity = 353/521 (67.75%), Postives = 440/521 (84.45%), Query Frame = 0


Query: 24  SVVACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAE 83
           +V+A  ++ANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILK+LEVEHPAAKVL ELA+
Sbjct: 21  NVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHPAAKVLCELAD 80

Query: 84  LQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVEEKLAVKV 143
           LQD+EVGDGTTSVVI+AAELLK A++LV+ KIHPTSII GYRLA +EA +Y+ E L +  
Sbjct: 81  LQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSIIGGYRLACKEAVRYINENLIINT 140

Query: 144 EKLGKDSLINCAKTSMSSKLITGDSDFFANMVVDAVQAVKMTNARGEVKYPIKGINILKA 203
           ++LGKD LIN AKTSMSSK+I  D DFFANMVVDAV AVK T+ +G+ +YP+  IN+LKA
Sbjct: 141 DELGKDCLINAAKTSMSSKIIGIDGDFFANMVVDAVLAVKYTDVKGQPRYPVNSINVLKA 200

Query: 204 HGKSAKDSYLLNGYALNSGRAAQGMPIRVAPARIACLDFNLQKTKMQLGVQVLVSDPREL 263
           HG+S K+S L+NGYALN   A+QGMP R+  A+IACLDF+LQKTKM+LGVQV+++DP +L
Sbjct: 201 HGRSQKESMLINGYALNCVVASQGMPKRIVNAKIACLDFSLQKTKMKLGVQVVITDPEKL 260

Query: 264 EKIRQRESDMMKERIEKLLKAGANVILTTKGIDDMALKYFVEAGAIAVRRVKKEDMRHVA 323
           ++IR+RE+D+ KERI+K+L  GANVILTT GIDDM LKYFVE+  IAVRRV K D++ +A
Sbjct: 261 DQIRKREADITKERIQKILATGANVILTTGGIDDMCLKYFVESMTIAVRRVLKRDLKRIA 320

Query: 324 KATGATMVSTFADMEGEETFEASLLGYADEVVEERISDDDVVLIKGAKTTSAVSLILRGA 383
           KA+GAT++ST A +EGEE+FEAS+LG A+EVV+ERI DD+++LIK  K  ++ S+ILRGA
Sbjct: 321 KASGATILSTLASLEGEESFEASMLGQAEEVVQERICDDELILIKNTKARTSASIILRGA 380

Query: 384 NDYMLDEMERALHDALSIVKRTLESNTVVAGGGAVESALSVYLEYLATTLGSREQLAIAE 443
           ND+M DEMER+LHDAL +VKR LES +VV GGGAVE+ALS+YLE  AT++GSREQLAIAE
Sbjct: 381 NDFMCDEMERSLHDALCVVKRVLESKSVVPGGGAVEAALSIYLENYATSMGSREQLAIAE 440

Query: 444 FAESLLIIPKVLAVNAAKDATELVAKLRAYHHTAQTKADKKHLSSMGLDLSNGTIRNNLE 503
           FA SLLIIP  LAVNAA+D+T+LVAKLRA+H+ AQ   ++K+L  +GLDL NG  R+N +
Sbjct: 441 FARSLLIIPNTLAVNAAQDSTDLVAKLRAFHNEAQVNPERKNLKWIGLDLVNGKPRDNRQ 500

Query: 504 AGVIEPAMSKVKIIQFATEAAITILRIDDMIKLYKDETQNE 545
            GV EP M KVK ++FATEAAITILRIDD+IKL+ +   ++
Sbjct: 501 TGVFEPTMVKVKSLKFATEAAITILRIDDLIKLHPESKDDK 541

[Close]

BLAST of CmoCh01G005210.1 vs. ExPASy TrEMBL
Match: A0A6J1GBK3 (CCT-alpha OS=Cucurbita moschata OX=3662 GN=LOC111452480 PE=3 SV=1)

HSP 1 Score: 969.5 bits (2505), Expect = 5.7e-279
Identity = 521/522 (99.81%), Postives = 522/522 (100.00%), Query Frame = 0


Query: 24  SVVACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAE 83
           +VVACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAE
Sbjct: 24  NVVACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAE 83

Query: 84  LQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVEEKLAVKV 143
           LQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVEEKLAVKV
Sbjct: 84  LQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVEEKLAVKV 143

Query: 144 EKLGKDSLINCAKTSMSSKLITGDSDFFANMVVDAVQAVKMTNARGEVKYPIKGINILKA 203
           EKLGKDSLINCAKTSMSSKLITGDSDFFANMVVDAVQAVKMTNARGEVKYPIKGINILKA
Sbjct: 144 EKLGKDSLINCAKTSMSSKLITGDSDFFANMVVDAVQAVKMTNARGEVKYPIKGINILKA 203

Query: 204 HGKSAKDSYLLNGYALNSGRAAQGMPIRVAPARIACLDFNLQKTKMQLGVQVLVSDPREL 263
           HGKSAKDSYLLNGYALNSGRAAQGMPIRVAPARIACLDFNLQKTKMQLGVQVLVSDPREL
Sbjct: 204 HGKSAKDSYLLNGYALNSGRAAQGMPIRVAPARIACLDFNLQKTKMQLGVQVLVSDPREL 263

Query: 264 EKIRQRESDMMKERIEKLLKAGANVILTTKGIDDMALKYFVEAGAIAVRRVKKEDMRHVA 323
           EKIRQRESDMMKERIEKLLKAGANVILTTKGIDDMALKYFVEAGAIAVRRVKKEDMRHVA
Sbjct: 264 EKIRQRESDMMKERIEKLLKAGANVILTTKGIDDMALKYFVEAGAIAVRRVKKEDMRHVA 323

Query: 324 KATGATMVSTFADMEGEETFEASLLGYADEVVEERISDDDVVLIKGAKTTSAVSLILRGA 383
           KATGATMVSTFADMEGEETFEASLLGYADEVVEERISDDDVVLIKGAKTTSAVSLILRGA
Sbjct: 324 KATGATMVSTFADMEGEETFEASLLGYADEVVEERISDDDVVLIKGAKTTSAVSLILRGA 383

Query: 384 NDYMLDEMERALHDALSIVKRTLESNTVVAGGGAVESALSVYLEYLATTLGSREQLAIAE 443
           NDYMLDEMERALHDALSIVKRTLESNTVVAGGGAVESALSVYLEYLATTLGSREQLAIAE
Sbjct: 384 NDYMLDEMERALHDALSIVKRTLESNTVVAGGGAVESALSVYLEYLATTLGSREQLAIAE 443

Query: 444 FAESLLIIPKVLAVNAAKDATELVAKLRAYHHTAQTKADKKHLSSMGLDLSNGTIRNNLE 503
           FAESLLIIPKVLAVNAAKDATELVAKLRAYHHTAQTKADKKHLSSMGLDLSNGTIRNNLE
Sbjct: 444 FAESLLIIPKVLAVNAAKDATELVAKLRAYHHTAQTKADKKHLSSMGLDLSNGTIRNNLE 503

Query: 504 AGVIEPAMSKVKIIQFATEAAITILRIDDMIKLYKDETQNEE 546
           AGVIEPAMSKVKIIQFATEAAITILRIDDMIKLYKDETQNEE
Sbjct: 504 AGVIEPAMSKVKIIQFATEAAITILRIDDMIKLYKDETQNEE 545

[Close]

BLAST of CmoCh01G005210.1 vs. ExPASy TrEMBL
Match: A0A6J1K8Y1 (CCT-alpha OS=Cucurbita maxima OX=3661 GN=LOC111492751 PE=3 SV=1)

HSP 1 Score: 965.3 bits (2494), Expect = 1.1e-277
Identity = 518/522 (99.23%), Postives = 521/522 (99.81%), Query Frame = 0


Query: 24  SVVACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAE 83
           +VVACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAE
Sbjct: 24  NVVACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAE 83

Query: 84  LQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVEEKLAVKV 143
           LQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYV+EKLAVKV
Sbjct: 84  LQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVDEKLAVKV 143

Query: 144 EKLGKDSLINCAKTSMSSKLITGDSDFFANMVVDAVQAVKMTNARGEVKYPIKGINILKA 203
           EKLGKDSLINCAKTSMSSKLITGDSDFFANMVVDAVQAVKMTNARGEVKYPIKGINILKA
Sbjct: 144 EKLGKDSLINCAKTSMSSKLITGDSDFFANMVVDAVQAVKMTNARGEVKYPIKGINILKA 203

Query: 204 HGKSAKDSYLLNGYALNSGRAAQGMPIRVAPARIACLDFNLQKTKMQLGVQVLVSDPREL 263
           HGKSAKDSYLLNGYALNSGRAAQGMPIRVAPARIACLDFNLQKTKMQLGVQVLVSDPREL
Sbjct: 204 HGKSAKDSYLLNGYALNSGRAAQGMPIRVAPARIACLDFNLQKTKMQLGVQVLVSDPREL 263

Query: 264 EKIRQRESDMMKERIEKLLKAGANVILTTKGIDDMALKYFVEAGAIAVRRVKKEDMRHVA 323
           EKIRQRESDMMKERIEKLLKAGANVILTTKGIDDMALKYFVEAGA+AVRRVKKEDMRHVA
Sbjct: 264 EKIRQRESDMMKERIEKLLKAGANVILTTKGIDDMALKYFVEAGAMAVRRVKKEDMRHVA 323

Query: 324 KATGATMVSTFADMEGEETFEASLLGYADEVVEERISDDDVVLIKGAKTTSAVSLILRGA 383
           KATGATMVSTFADMEGEETFE SLLGYADEVVEERISDDDVVLIKGAKTTSAVSLILRGA
Sbjct: 324 KATGATMVSTFADMEGEETFEPSLLGYADEVVEERISDDDVVLIKGAKTTSAVSLILRGA 383

Query: 384 NDYMLDEMERALHDALSIVKRTLESNTVVAGGGAVESALSVYLEYLATTLGSREQLAIAE 443
           NDYMLDEMERALHDALSIVKRTLESNTVVAGGGAVESALSVYLEYLATTLGSREQLAIAE
Sbjct: 384 NDYMLDEMERALHDALSIVKRTLESNTVVAGGGAVESALSVYLEYLATTLGSREQLAIAE 443

Query: 444 FAESLLIIPKVLAVNAAKDATELVAKLRAYHHTAQTKADKKHLSSMGLDLSNGTIRNNLE 503
           FAESLLIIPKVLAVNAAKDATELVAKLRAYHHTAQTKADKKHLSSMGLDLSNGTIRNNLE
Sbjct: 444 FAESLLIIPKVLAVNAAKDATELVAKLRAYHHTAQTKADKKHLSSMGLDLSNGTIRNNLE 503

Query: 504 AGVIEPAMSKVKIIQFATEAAITILRIDDMIKLYKDETQNEE 546
           AGVIEPAMSKVKIIQFATEAAITILRIDDMIKLYKDETQNEE
Sbjct: 504 AGVIEPAMSKVKIIQFATEAAITILRIDDMIKLYKDETQNEE 545

[Close]

BLAST of CmoCh01G005210.1 vs. ExPASy TrEMBL
Match: A0A6J1CTJ9 (CCT-alpha OS=Momordica charantia OX=3673 GN=LOC111014169 PE=3 SV=1)

HSP 1 Score: 956.1 bits (2470), Expect = 6.5e-275
Identity = 509/522 (97.51%), Postives = 520/522 (99.62%), Query Frame = 0


Query: 24  SVVACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAE 83
           +VVACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAE
Sbjct: 24  NVVACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAE 83

Query: 84  LQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVEEKLAVKV 143
           LQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVEEKLAVKV
Sbjct: 84  LQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVEEKLAVKV 143

Query: 144 EKLGKDSLINCAKTSMSSKLITGDSDFFANMVVDAVQAVKMTNARGEVKYPIKGINILKA 203
           E+LGKDSLINCAKTSMSSKLIT DSDFFAN+VVDAVQAVKMTNARGE+KYPIKGINILKA
Sbjct: 144 ERLGKDSLINCAKTSMSSKLITSDSDFFANLVVDAVQAVKMTNARGEIKYPIKGINILKA 203

Query: 204 HGKSAKDSYLLNGYALNSGRAAQGMPIRVAPARIACLDFNLQKTKMQLGVQVLVSDPREL 263
           HGKSAKDSYLLNGYALN+GRAAQGMPIRVAPARIACLDFNLQKTKMQLGVQVLV+DPREL
Sbjct: 204 HGKSAKDSYLLNGYALNTGRAAQGMPIRVAPARIACLDFNLQKTKMQLGVQVLVTDPREL 263

Query: 264 EKIRQRESDMMKERIEKLLKAGANVILTTKGIDDMALKYFVEAGAIAVRRVKKEDMRHVA 323
           EKIRQRESDMMKERIEKLLKAGANV+LTTKGIDDMALKYFVE GAIAVRRVKKEDMRHVA
Sbjct: 264 EKIRQRESDMMKERIEKLLKAGANVVLTTKGIDDMALKYFVETGAIAVRRVKKEDMRHVA 323

Query: 324 KATGATMVSTFADMEGEETFEASLLGYADEVVEERISDDDVVLIKGAKTTSAVSLILRGA 383
           KATGATMVSTFADMEGEETFE+SLLGYADEVVEERI+DDDVV+IKG+KTTSAVSLILRGA
Sbjct: 324 KATGATMVSTFADMEGEETFESSLLGYADEVVEERIADDDVVMIKGSKTTSAVSLILRGA 383

Query: 384 NDYMLDEMERALHDALSIVKRTLESNTVVAGGGAVESALSVYLEYLATTLGSREQLAIAE 443
           NDYMLDEMERALHDALSIVKRTLESNTVVAGGGAVESALSVYLEYLATTLGSREQLAIAE
Sbjct: 384 NDYMLDEMERALHDALSIVKRTLESNTVVAGGGAVESALSVYLEYLATTLGSREQLAIAE 443

Query: 444 FAESLLIIPKVLAVNAAKDATELVAKLRAYHHTAQTKADKKHLSSMGLDLSNGTIRNNLE 503
           FAESLLIIPKVLAVNAAKDATELVAKLRAYHHTAQTKADKKHLSSMGLDLSNGTIRNNLE
Sbjct: 444 FAESLLIIPKVLAVNAAKDATELVAKLRAYHHTAQTKADKKHLSSMGLDLSNGTIRNNLE 503

Query: 504 AGVIEPAMSKVKIIQFATEAAITILRIDDMIKLYKDETQNEE 546
           AGVIEPAMSKVKIIQFATEAAITILRIDDMIKLYKDETQNEE
Sbjct: 504 AGVIEPAMSKVKIIQFATEAAITILRIDDMIKLYKDETQNEE 545

[Close]

BLAST of CmoCh01G005210.1 vs. ExPASy TrEMBL
Match: A0A5D3DFG1 (CCT-alpha OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold333G00750 PE=3 SV=1)

HSP 1 Score: 952.6 bits (2461), Expect = 7.2e-274
Identity = 506/522 (96.93%), Postives = 519/522 (99.43%), Query Frame = 0


Query: 24  SVVACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAE 83
           +VVACQAVANIVKSSLGPVGLDKMLVDD GDVTITNDGATILKMLEVEHPAAKVLVELAE
Sbjct: 24  NVVACQAVANIVKSSLGPVGLDKMLVDDYGDVTITNDGATILKMLEVEHPAAKVLVELAE 83

Query: 84  LQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVEEKLAVKV 143
           LQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVEEKLAVKV
Sbjct: 84  LQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVEEKLAVKV 143

Query: 144 EKLGKDSLINCAKTSMSSKLITGDSDFFANMVVDAVQAVKMTNARGEVKYPIKGINILKA 203
           EKLGKDSLINCAKTSMSSKLIT DSDFFAN+VVDAVQAVKMTNARGE+KYPIKGINILKA
Sbjct: 144 EKLGKDSLINCAKTSMSSKLITSDSDFFANLVVDAVQAVKMTNARGEIKYPIKGINILKA 203

Query: 204 HGKSAKDSYLLNGYALNSGRAAQGMPIRVAPARIACLDFNLQKTKMQLGVQVLVSDPREL 263
           HGKSAKDSYLLNGYALN+GRAAQGMP+RVAPARIACLDFNLQKTKMQLGVQVLV+DPREL
Sbjct: 204 HGKSAKDSYLLNGYALNTGRAAQGMPVRVAPARIACLDFNLQKTKMQLGVQVLVTDPREL 263

Query: 264 EKIRQRESDMMKERIEKLLKAGANVILTTKGIDDMALKYFVEAGAIAVRRVKKEDMRHVA 323
           EKIRQRESDMMKERIEKLLKAGANV+LTTKGIDDMALKYFVEAGAIAVRRVKKEDMRHVA
Sbjct: 264 EKIRQRESDMMKERIEKLLKAGANVVLTTKGIDDMALKYFVEAGAIAVRRVKKEDMRHVA 323

Query: 324 KATGATMVSTFADMEGEETFEASLLGYADEVVEERISDDDVVLIKGAKTTSAVSLILRGA 383
           KATGATMVSTFADMEGEETFE SLLGYADEVVEERI+DDDVV+IKG+KTTSA+SLILRGA
Sbjct: 324 KATGATMVSTFADMEGEETFEPSLLGYADEVVEERIADDDVVMIKGSKTTSAISLILRGA 383

Query: 384 NDYMLDEMERALHDALSIVKRTLESNTVVAGGGAVESALSVYLEYLATTLGSREQLAIAE 443
           NDYMLDEMERALHDALSIVKRTLESNTVVAGGGAVESALSVYLEYLATTLGSREQLAIAE
Sbjct: 384 NDYMLDEMERALHDALSIVKRTLESNTVVAGGGAVESALSVYLEYLATTLGSREQLAIAE 443

Query: 444 FAESLLIIPKVLAVNAAKDATELVAKLRAYHHTAQTKADKKHLSSMGLDLSNGTIRNNLE 503
           FAESLLIIPKVLAVNAAKDATELVAKLRAYHHTAQTKADKKHLSSMGLDL+NG+IRNNLE
Sbjct: 444 FAESLLIIPKVLAVNAAKDATELVAKLRAYHHTAQTKADKKHLSSMGLDLTNGSIRNNLE 503

Query: 504 AGVIEPAMSKVKIIQFATEAAITILRIDDMIKLYKDETQNEE 546
           AGVIEPAMSKVKIIQFATEAAITILRIDDMIKLYKDETQNEE
Sbjct: 504 AGVIEPAMSKVKIIQFATEAAITILRIDDMIKLYKDETQNEE 545

[Close]

BLAST of CmoCh01G005210.1 vs. ExPASy TrEMBL
Match: A0A1S3B4R0 (CCT-alpha OS=Cucumis melo OX=3656 GN=LOC103485803 PE=3 SV=1)

HSP 1 Score: 952.6 bits (2461), Expect = 7.2e-274
Identity = 506/522 (96.93%), Postives = 519/522 (99.43%), Query Frame = 0


Query: 24  SVVACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAE 83
           +VVACQAVANIVKSSLGPVGLDKMLVDD GDVTITNDGATILKMLEVEHPAAKVLVELAE
Sbjct: 24  NVVACQAVANIVKSSLGPVGLDKMLVDDYGDVTITNDGATILKMLEVEHPAAKVLVELAE 83

Query: 84  LQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVEEKLAVKV 143
           LQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVEEKLAVKV
Sbjct: 84  LQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVEEKLAVKV 143

Query: 144 EKLGKDSLINCAKTSMSSKLITGDSDFFANMVVDAVQAVKMTNARGEVKYPIKGINILKA 203
           EKLGKDSLINCAKTSMSSKLIT DSDFFAN+VVDAVQAVKMTNARGE+KYPIKGINILKA
Sbjct: 144 EKLGKDSLINCAKTSMSSKLITSDSDFFANLVVDAVQAVKMTNARGEIKYPIKGINILKA 203

Query: 204 HGKSAKDSYLLNGYALNSGRAAQGMPIRVAPARIACLDFNLQKTKMQLGVQVLVSDPREL 263
           HGKSAKDSYLLNGYALN+GRAAQGMP+RVAPARIACLDFNLQKTKMQLGVQVLV+DPREL
Sbjct: 204 HGKSAKDSYLLNGYALNTGRAAQGMPVRVAPARIACLDFNLQKTKMQLGVQVLVTDPREL 263

Query: 264 EKIRQRESDMMKERIEKLLKAGANVILTTKGIDDMALKYFVEAGAIAVRRVKKEDMRHVA 323
           EKIRQRESDMMKERIEKLLKAGANV+LTTKGIDDMALKYFVEAGAIAVRRVKKEDMRHVA
Sbjct: 264 EKIRQRESDMMKERIEKLLKAGANVVLTTKGIDDMALKYFVEAGAIAVRRVKKEDMRHVA 323

Query: 324 KATGATMVSTFADMEGEETFEASLLGYADEVVEERISDDDVVLIKGAKTTSAVSLILRGA 383
           KATGATMVSTFADMEGEETFE SLLGYADEVVEERI+DDDVV+IKG+KTTSA+SLILRGA
Sbjct: 324 KATGATMVSTFADMEGEETFEPSLLGYADEVVEERIADDDVVMIKGSKTTSAISLILRGA 383

Query: 384 NDYMLDEMERALHDALSIVKRTLESNTVVAGGGAVESALSVYLEYLATTLGSREQLAIAE 443
           NDYMLDEMERALHDALSIVKRTLESNTVVAGGGAVESALSVYLEYLATTLGSREQLAIAE
Sbjct: 384 NDYMLDEMERALHDALSIVKRTLESNTVVAGGGAVESALSVYLEYLATTLGSREQLAIAE 443

Query: 444 FAESLLIIPKVLAVNAAKDATELVAKLRAYHHTAQTKADKKHLSSMGLDLSNGTIRNNLE 503
           FAESLLIIPKVLAVNAAKDATELVAKLRAYHHTAQTKADKKHLSSMGLDL+NG+IRNNLE
Sbjct: 444 FAESLLIIPKVLAVNAAKDATELVAKLRAYHHTAQTKADKKHLSSMGLDLTNGSIRNNLE 503

Query: 504 AGVIEPAMSKVKIIQFATEAAITILRIDDMIKLYKDETQNEE 546
           AGVIEPAMSKVKIIQFATEAAITILRIDDMIKLYKDETQNEE
Sbjct: 504 AGVIEPAMSKVKIIQFATEAAITILRIDDMIKLYKDETQNEE 545

[Close]

BLAST of CmoCh01G005210.1 vs. NCBI nr
Match: XP_022949009.1 (T-complex protein 1 subunit alpha [Cucurbita moschata] >KAG6607133.1 T-complex protein 1 subunit alpha, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 969.5 bits (2505), Expect = 1.2e-278
Identity = 521/522 (99.81%), Postives = 522/522 (100.00%), Query Frame = 0


Query: 24  SVVACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAE 83
           +VVACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAE
Sbjct: 24  NVVACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAE 83

Query: 84  LQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVEEKLAVKV 143
           LQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVEEKLAVKV
Sbjct: 84  LQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVEEKLAVKV 143

Query: 144 EKLGKDSLINCAKTSMSSKLITGDSDFFANMVVDAVQAVKMTNARGEVKYPIKGINILKA 203
           EKLGKDSLINCAKTSMSSKLITGDSDFFANMVVDAVQAVKMTNARGEVKYPIKGINILKA
Sbjct: 144 EKLGKDSLINCAKTSMSSKLITGDSDFFANMVVDAVQAVKMTNARGEVKYPIKGINILKA 203

Query: 204 HGKSAKDSYLLNGYALNSGRAAQGMPIRVAPARIACLDFNLQKTKMQLGVQVLVSDPREL 263
           HGKSAKDSYLLNGYALNSGRAAQGMPIRVAPARIACLDFNLQKTKMQLGVQVLVSDPREL
Sbjct: 204 HGKSAKDSYLLNGYALNSGRAAQGMPIRVAPARIACLDFNLQKTKMQLGVQVLVSDPREL 263

Query: 264 EKIRQRESDMMKERIEKLLKAGANVILTTKGIDDMALKYFVEAGAIAVRRVKKEDMRHVA 323
           EKIRQRESDMMKERIEKLLKAGANVILTTKGIDDMALKYFVEAGAIAVRRVKKEDMRHVA
Sbjct: 264 EKIRQRESDMMKERIEKLLKAGANVILTTKGIDDMALKYFVEAGAIAVRRVKKEDMRHVA 323

Query: 324 KATGATMVSTFADMEGEETFEASLLGYADEVVEERISDDDVVLIKGAKTTSAVSLILRGA 383
           KATGATMVSTFADMEGEETFEASLLGYADEVVEERISDDDVVLIKGAKTTSAVSLILRGA
Sbjct: 324 KATGATMVSTFADMEGEETFEASLLGYADEVVEERISDDDVVLIKGAKTTSAVSLILRGA 383

Query: 384 NDYMLDEMERALHDALSIVKRTLESNTVVAGGGAVESALSVYLEYLATTLGSREQLAIAE 443
           NDYMLDEMERALHDALSIVKRTLESNTVVAGGGAVESALSVYLEYLATTLGSREQLAIAE
Sbjct: 384 NDYMLDEMERALHDALSIVKRTLESNTVVAGGGAVESALSVYLEYLATTLGSREQLAIAE 443

Query: 444 FAESLLIIPKVLAVNAAKDATELVAKLRAYHHTAQTKADKKHLSSMGLDLSNGTIRNNLE 503
           FAESLLIIPKVLAVNAAKDATELVAKLRAYHHTAQTKADKKHLSSMGLDLSNGTIRNNLE
Sbjct: 444 FAESLLIIPKVLAVNAAKDATELVAKLRAYHHTAQTKADKKHLSSMGLDLSNGTIRNNLE 503

Query: 504 AGVIEPAMSKVKIIQFATEAAITILRIDDMIKLYKDETQNEE 546
           AGVIEPAMSKVKIIQFATEAAITILRIDDMIKLYKDETQNEE
Sbjct: 504 AGVIEPAMSKVKIIQFATEAAITILRIDDMIKLYKDETQNEE 545

[Close]

BLAST of CmoCh01G005210.1 vs. NCBI nr
Match: XP_023524959.1 (T-complex protein 1 subunit alpha [Cucurbita pepo subsp. pepo] >KAG7036823.1 T-complex protein 1 subunit alpha [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 967.6 bits (2500), Expect = 4.5e-278
Identity = 520/522 (99.62%), Postives = 521/522 (99.81%), Query Frame = 0


Query: 24  SVVACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAE 83
           +VVACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAE
Sbjct: 24  NVVACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAE 83

Query: 84  LQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVEEKLAVKV 143
           LQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVEEKLAVKV
Sbjct: 84  LQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVEEKLAVKV 143

Query: 144 EKLGKDSLINCAKTSMSSKLITGDSDFFANMVVDAVQAVKMTNARGEVKYPIKGINILKA 203
           EKLGKDSLINCAKTSMSSKLITGDSDFFANMVVDAVQAVKMTNARGEVKYPIKGINILKA
Sbjct: 144 EKLGKDSLINCAKTSMSSKLITGDSDFFANMVVDAVQAVKMTNARGEVKYPIKGINILKA 203

Query: 204 HGKSAKDSYLLNGYALNSGRAAQGMPIRVAPARIACLDFNLQKTKMQLGVQVLVSDPREL 263
           HGKSAKDSYLLNGYALNSGRAAQGMPIRVAPARIACLDFNLQKTKMQLGVQVLVSDPREL
Sbjct: 204 HGKSAKDSYLLNGYALNSGRAAQGMPIRVAPARIACLDFNLQKTKMQLGVQVLVSDPREL 263

Query: 264 EKIRQRESDMMKERIEKLLKAGANVILTTKGIDDMALKYFVEAGAIAVRRVKKEDMRHVA 323
           EKIRQRESDMMKERIEKLLKAGANVILTTKGIDDMALKYFVEAGAIAVRRVKKEDMRHVA
Sbjct: 264 EKIRQRESDMMKERIEKLLKAGANVILTTKGIDDMALKYFVEAGAIAVRRVKKEDMRHVA 323

Query: 324 KATGATMVSTFADMEGEETFEASLLGYADEVVEERISDDDVVLIKGAKTTSAVSLILRGA 383
           KATGATMVSTFADMEGEETFE SLLGYADEVVEERISDDDVVLIKGAKTTSAVSLILRGA
Sbjct: 324 KATGATMVSTFADMEGEETFEPSLLGYADEVVEERISDDDVVLIKGAKTTSAVSLILRGA 383

Query: 384 NDYMLDEMERALHDALSIVKRTLESNTVVAGGGAVESALSVYLEYLATTLGSREQLAIAE 443
           NDYMLDEMERALHDALSIVKRTLESNTVVAGGGAVESALSVYLEYLATTLGSREQLAIAE
Sbjct: 384 NDYMLDEMERALHDALSIVKRTLESNTVVAGGGAVESALSVYLEYLATTLGSREQLAIAE 443

Query: 444 FAESLLIIPKVLAVNAAKDATELVAKLRAYHHTAQTKADKKHLSSMGLDLSNGTIRNNLE 503
           FAESLLIIPKVLAVNAAKDATELVAKLRAYHHTAQTKADKKHLSSMGLDLSNGTIRNNLE
Sbjct: 444 FAESLLIIPKVLAVNAAKDATELVAKLRAYHHTAQTKADKKHLSSMGLDLSNGTIRNNLE 503

Query: 504 AGVIEPAMSKVKIIQFATEAAITILRIDDMIKLYKDETQNEE 546
           AGVIEPAMSKVKIIQFATEAAITILRIDDMIKLYKDETQNEE
Sbjct: 504 AGVIEPAMSKVKIIQFATEAAITILRIDDMIKLYKDETQNEE 545

[Close]

BLAST of CmoCh01G005210.1 vs. NCBI nr
Match: XP_022997956.1 (T-complex protein 1 subunit alpha [Cucurbita maxima])

HSP 1 Score: 965.3 bits (2494), Expect = 2.2e-277
Identity = 518/522 (99.23%), Postives = 521/522 (99.81%), Query Frame = 0


Query: 24  SVVACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAE 83
           +VVACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAE
Sbjct: 24  NVVACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAE 83

Query: 84  LQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVEEKLAVKV 143
           LQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYV+EKLAVKV
Sbjct: 84  LQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVDEKLAVKV 143

Query: 144 EKLGKDSLINCAKTSMSSKLITGDSDFFANMVVDAVQAVKMTNARGEVKYPIKGINILKA 203
           EKLGKDSLINCAKTSMSSKLITGDSDFFANMVVDAVQAVKMTNARGEVKYPIKGINILKA
Sbjct: 144 EKLGKDSLINCAKTSMSSKLITGDSDFFANMVVDAVQAVKMTNARGEVKYPIKGINILKA 203

Query: 204 HGKSAKDSYLLNGYALNSGRAAQGMPIRVAPARIACLDFNLQKTKMQLGVQVLVSDPREL 263
           HGKSAKDSYLLNGYALNSGRAAQGMPIRVAPARIACLDFNLQKTKMQLGVQVLVSDPREL
Sbjct: 204 HGKSAKDSYLLNGYALNSGRAAQGMPIRVAPARIACLDFNLQKTKMQLGVQVLVSDPREL 263

Query: 264 EKIRQRESDMMKERIEKLLKAGANVILTTKGIDDMALKYFVEAGAIAVRRVKKEDMRHVA 323
           EKIRQRESDMMKERIEKLLKAGANVILTTKGIDDMALKYFVEAGA+AVRRVKKEDMRHVA
Sbjct: 264 EKIRQRESDMMKERIEKLLKAGANVILTTKGIDDMALKYFVEAGAMAVRRVKKEDMRHVA 323

Query: 324 KATGATMVSTFADMEGEETFEASLLGYADEVVEERISDDDVVLIKGAKTTSAVSLILRGA 383
           KATGATMVSTFADMEGEETFE SLLGYADEVVEERISDDDVVLIKGAKTTSAVSLILRGA
Sbjct: 324 KATGATMVSTFADMEGEETFEPSLLGYADEVVEERISDDDVVLIKGAKTTSAVSLILRGA 383

Query: 384 NDYMLDEMERALHDALSIVKRTLESNTVVAGGGAVESALSVYLEYLATTLGSREQLAIAE 443
           NDYMLDEMERALHDALSIVKRTLESNTVVAGGGAVESALSVYLEYLATTLGSREQLAIAE
Sbjct: 384 NDYMLDEMERALHDALSIVKRTLESNTVVAGGGAVESALSVYLEYLATTLGSREQLAIAE 443

Query: 444 FAESLLIIPKVLAVNAAKDATELVAKLRAYHHTAQTKADKKHLSSMGLDLSNGTIRNNLE 503
           FAESLLIIPKVLAVNAAKDATELVAKLRAYHHTAQTKADKKHLSSMGLDLSNGTIRNNLE
Sbjct: 444 FAESLLIIPKVLAVNAAKDATELVAKLRAYHHTAQTKADKKHLSSMGLDLSNGTIRNNLE 503

Query: 504 AGVIEPAMSKVKIIQFATEAAITILRIDDMIKLYKDETQNEE 546
           AGVIEPAMSKVKIIQFATEAAITILRIDDMIKLYKDETQNEE
Sbjct: 504 AGVIEPAMSKVKIIQFATEAAITILRIDDMIKLYKDETQNEE 545

[Close]

BLAST of CmoCh01G005210.1 vs. NCBI nr
Match: XP_022144491.1 (T-complex protein 1 subunit alpha [Momordica charantia])

HSP 1 Score: 956.1 bits (2470), Expect = 1.3e-274
Identity = 509/522 (97.51%), Postives = 520/522 (99.62%), Query Frame = 0


Query: 24  SVVACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAE 83
           +VVACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAE
Sbjct: 24  NVVACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAE 83

Query: 84  LQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVEEKLAVKV 143
           LQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVEEKLAVKV
Sbjct: 84  LQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVEEKLAVKV 143

Query: 144 EKLGKDSLINCAKTSMSSKLITGDSDFFANMVVDAVQAVKMTNARGEVKYPIKGINILKA 203
           E+LGKDSLINCAKTSMSSKLIT DSDFFAN+VVDAVQAVKMTNARGE+KYPIKGINILKA
Sbjct: 144 ERLGKDSLINCAKTSMSSKLITSDSDFFANLVVDAVQAVKMTNARGEIKYPIKGINILKA 203

Query: 204 HGKSAKDSYLLNGYALNSGRAAQGMPIRVAPARIACLDFNLQKTKMQLGVQVLVSDPREL 263
           HGKSAKDSYLLNGYALN+GRAAQGMPIRVAPARIACLDFNLQKTKMQLGVQVLV+DPREL
Sbjct: 204 HGKSAKDSYLLNGYALNTGRAAQGMPIRVAPARIACLDFNLQKTKMQLGVQVLVTDPREL 263

Query: 264 EKIRQRESDMMKERIEKLLKAGANVILTTKGIDDMALKYFVEAGAIAVRRVKKEDMRHVA 323
           EKIRQRESDMMKERIEKLLKAGANV+LTTKGIDDMALKYFVE GAIAVRRVKKEDMRHVA
Sbjct: 264 EKIRQRESDMMKERIEKLLKAGANVVLTTKGIDDMALKYFVETGAIAVRRVKKEDMRHVA 323

Query: 324 KATGATMVSTFADMEGEETFEASLLGYADEVVEERISDDDVVLIKGAKTTSAVSLILRGA 383
           KATGATMVSTFADMEGEETFE+SLLGYADEVVEERI+DDDVV+IKG+KTTSAVSLILRGA
Sbjct: 324 KATGATMVSTFADMEGEETFESSLLGYADEVVEERIADDDVVMIKGSKTTSAVSLILRGA 383

Query: 384 NDYMLDEMERALHDALSIVKRTLESNTVVAGGGAVESALSVYLEYLATTLGSREQLAIAE 443
           NDYMLDEMERALHDALSIVKRTLESNTVVAGGGAVESALSVYLEYLATTLGSREQLAIAE
Sbjct: 384 NDYMLDEMERALHDALSIVKRTLESNTVVAGGGAVESALSVYLEYLATTLGSREQLAIAE 443

Query: 444 FAESLLIIPKVLAVNAAKDATELVAKLRAYHHTAQTKADKKHLSSMGLDLSNGTIRNNLE 503
           FAESLLIIPKVLAVNAAKDATELVAKLRAYHHTAQTKADKKHLSSMGLDLSNGTIRNNLE
Sbjct: 444 FAESLLIIPKVLAVNAAKDATELVAKLRAYHHTAQTKADKKHLSSMGLDLSNGTIRNNLE 503

Query: 504 AGVIEPAMSKVKIIQFATEAAITILRIDDMIKLYKDETQNEE 546
           AGVIEPAMSKVKIIQFATEAAITILRIDDMIKLYKDETQNEE
Sbjct: 504 AGVIEPAMSKVKIIQFATEAAITILRIDDMIKLYKDETQNEE 545

[Close]

BLAST of CmoCh01G005210.1 vs. NCBI nr
Match: XP_008441727.1 (PREDICTED: T-complex protein 1 subunit alpha [Cucumis melo] >TYK22198.1 T-complex protein 1 subunit alpha [Cucumis melo var. makuwa])

HSP 1 Score: 952.6 bits (2461), Expect = 1.5e-273
Identity = 506/522 (96.93%), Postives = 519/522 (99.43%), Query Frame = 0


Query: 24  SVVACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAE 83
           +VVACQAVANIVKSSLGPVGLDKMLVDD GDVTITNDGATILKMLEVEHPAAKVLVELAE
Sbjct: 24  NVVACQAVANIVKSSLGPVGLDKMLVDDYGDVTITNDGATILKMLEVEHPAAKVLVELAE 83

Query: 84  LQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVEEKLAVKV 143
           LQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVEEKLAVKV
Sbjct: 84  LQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVEEKLAVKV 143

Query: 144 EKLGKDSLINCAKTSMSSKLITGDSDFFANMVVDAVQAVKMTNARGEVKYPIKGINILKA 203
           EKLGKDSLINCAKTSMSSKLIT DSDFFAN+VVDAVQAVKMTNARGE+KYPIKGINILKA
Sbjct: 144 EKLGKDSLINCAKTSMSSKLITSDSDFFANLVVDAVQAVKMTNARGEIKYPIKGINILKA 203

Query: 204 HGKSAKDSYLLNGYALNSGRAAQGMPIRVAPARIACLDFNLQKTKMQLGVQVLVSDPREL 263
           HGKSAKDSYLLNGYALN+GRAAQGMP+RVAPARIACLDFNLQKTKMQLGVQVLV+DPREL
Sbjct: 204 HGKSAKDSYLLNGYALNTGRAAQGMPVRVAPARIACLDFNLQKTKMQLGVQVLVTDPREL 263

Query: 264 EKIRQRESDMMKERIEKLLKAGANVILTTKGIDDMALKYFVEAGAIAVRRVKKEDMRHVA 323
           EKIRQRESDMMKERIEKLLKAGANV+LTTKGIDDMALKYFVEAGAIAVRRVKKEDMRHVA
Sbjct: 264 EKIRQRESDMMKERIEKLLKAGANVVLTTKGIDDMALKYFVEAGAIAVRRVKKEDMRHVA 323

Query: 324 KATGATMVSTFADMEGEETFEASLLGYADEVVEERISDDDVVLIKGAKTTSAVSLILRGA 383
           KATGATMVSTFADMEGEETFE SLLGYADEVVEERI+DDDVV+IKG+KTTSA+SLILRGA
Sbjct: 324 KATGATMVSTFADMEGEETFEPSLLGYADEVVEERIADDDVVMIKGSKTTSAISLILRGA 383

Query: 384 NDYMLDEMERALHDALSIVKRTLESNTVVAGGGAVESALSVYLEYLATTLGSREQLAIAE 443
           NDYMLDEMERALHDALSIVKRTLESNTVVAGGGAVESALSVYLEYLATTLGSREQLAIAE
Sbjct: 384 NDYMLDEMERALHDALSIVKRTLESNTVVAGGGAVESALSVYLEYLATTLGSREQLAIAE 443

Query: 444 FAESLLIIPKVLAVNAAKDATELVAKLRAYHHTAQTKADKKHLSSMGLDLSNGTIRNNLE 503
           FAESLLIIPKVLAVNAAKDATELVAKLRAYHHTAQTKADKKHLSSMGLDL+NG+IRNNLE
Sbjct: 444 FAESLLIIPKVLAVNAAKDATELVAKLRAYHHTAQTKADKKHLSSMGLDLTNGSIRNNLE 503

Query: 504 AGVIEPAMSKVKIIQFATEAAITILRIDDMIKLYKDETQNEE 546
           AGVIEPAMSKVKIIQFATEAAITILRIDDMIKLYKDETQNEE
Sbjct: 504 AGVIEPAMSKVKIIQFATEAAITILRIDDMIKLYKDETQNEE 545

[Close]

BLAST of CmoCh01G005210.1 vs. TAIR 10
Match: AT3G20050.1 (T-complex protein 1 alpha subunit )

HSP 1 Score: 896.0 bits (2314), Expect = 1.5e-260
Identity = 473/522 (90.61%), Postives = 506/522 (96.93%), Query Frame = 0


Query: 24  SVVACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAE 83
           +V+ACQAV+NIVK+SLGPVGLDKMLVDDIGDVTITNDGATIL+MLEVEHPAAKVLVELAE
Sbjct: 24  NVMACQAVSNIVKTSLGPVGLDKMLVDDIGDVTITNDGATILRMLEVEHPAAKVLVELAE 83

Query: 84  LQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVEEKLAVKV 143
           LQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMRE+CKY+EEKL  KV
Sbjct: 84  LQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMRESCKYIEEKLVTKV 143

Query: 144 EKLGKDSLINCAKTSMSSKLITGDSDFFANMVVDAVQAVKMTNARGEVKYPIKGINILKA 203
           EKLGK  LINCAKTSMSSKLI+GDSDFFAN+VV+AV +VKMTN RGE+KYPIKGINILKA
Sbjct: 144 EKLGKVPLINCAKTSMSSKLISGDSDFFANLVVEAVLSVKMTNQRGEIKYPIKGINILKA 203

Query: 204 HGKSAKDSYLLNGYALNSGRAAQGMPIRVAPARIACLDFNLQKTKMQLGVQVLVSDPREL 263
           HG+SA+DSYLLNGYALN+GRAAQGMP+RV+PA+IACLDFNLQKTKMQLGVQV+V+DPREL
Sbjct: 204 HGQSARDSYLLNGYALNTGRAAQGMPLRVSPAKIACLDFNLQKTKMQLGVQVVVNDPREL 263

Query: 264 EKIRQRESDMMKERIEKLLKAGANVILTTKGIDDMALKYFVEAGAIAVRRVKKEDMRHVA 323
           EKIRQRE+DM KERIEKLLKAGANVILTTKGIDDMALKYFVEAGAIAVRRV+KEDMRHVA
Sbjct: 264 EKIRQREADMTKERIEKLLKAGANVILTTKGIDDMALKYFVEAGAIAVRRVRKEDMRHVA 323

Query: 324 KATGATMVSTFADMEGEETFEASLLGYADEVVEERISDDDVVLIKGAKTTSAVSLILRGA 383
           KATGAT+V+TFADMEGEETF+ + LG ADEVVEERI+DDDV+LIKG KT+SAVSLILRGA
Sbjct: 324 KATGATLVTTFADMEGEETFDPAHLGSADEVVEERIADDDVILIKGTKTSSAVSLILRGA 383

Query: 384 NDYMLDEMERALHDALSIVKRTLESNTVVAGGGAVESALSVYLEYLATTLGSREQLAIAE 443
           NDYMLDEMERALHDAL IVKRTLESNTVVAGGGAVESALSVYLE+LATTLGSREQLAIAE
Sbjct: 384 NDYMLDEMERALHDALCIVKRTLESNTVVAGGGAVESALSVYLEHLATTLGSREQLAIAE 443

Query: 444 FAESLLIIPKVLAVNAAKDATELVAKLRAYHHTAQTKADKKHLSSMGLDLSNGTIRNNLE 503
           FA++LLIIPKVLAVNAAKDATELVAKLRAYHHTAQTKADKKH SSMGLDL NGTIRNNLE
Sbjct: 444 FADALLIIPKVLAVNAAKDATELVAKLRAYHHTAQTKADKKHYSSMGLDLVNGTIRNNLE 503

Query: 504 AGVIEPAMSKVKIIQFATEAAITILRIDDMIKLYKDETQNEE 546
           AGVIEPAMSKVKIIQFATEAAITILRIDDMIKL KDE+Q EE
Sbjct: 504 AGVIEPAMSKVKIIQFATEAAITILRIDDMIKLVKDESQGEE 545

[Close]

BLAST of CmoCh01G005210.1 vs. TAIR 10
Match: AT3G11830.1 (TCP-1/cpn60 chaperonin family protein )

HSP 1 Score: 314.7 bits (805), Expect = 1.5e-85
Identity = 192/528 (36.36%), Postives = 314/528 (59.47%), Query Frame = 0


Query: 21  LVGSVVACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVE 80
           LV ++ AC AV ++V+++LGP G+DK++ DD G VTI+NDGATI+K+L++ HPAAK+LV+
Sbjct: 25  LVSNINACTAVGDVVRTTLGPRGMDKLIHDDKGSVTISNDGATIMKLLDIVHPAAKILVD 84

Query: 81  LAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVEEKLA 140
           +A+ QD EVGDGTT+VV++AAE LK A   + + +H  ++I  YR A   A   V+E LA
Sbjct: 85  IAKSQDSEVGDGTTTVVLLAAEFLKEAKPFIEDGVHAQNLIRSYRTASTLAIAKVKE-LA 144

Query: 141 VKVE----KLGKDSLINCAKTSMSSKLITGDSDFFANMVVDAVQAVKMTNARGEVKYPIK 200
           V +E    +  K  L  CA T++SSKLI G+ +FFA MVVDAV A+   +        + 
Sbjct: 145 VSIEGKSVEEKKGLLAKCAATTLSSKLIGGEKEFFATMVVDAVMAIGNDDR-------LN 204

Query: 201 GINILKAHGKSAKDSYLLNGYALNSGRAAQG---MPIRVAPARIACLDFNLQKTKMQLGV 260
            I I K  G + +DS+L++G A     +  G    P +    +I  L+  L+    +   
Sbjct: 205 LIGIKKVPGGNMRDSFLVDGVAFKKTFSYAGFEQQPKKFLNPKILLLNIELELKSEKENA 264

Query: 261 QVLVSDPRELEKIRQRESDMMKERIEKLLKAGANVILTTKGIDDMALKYFVEAGAIAVRR 320
           ++ +SDP + + I   E +++ ++++K +++GA V+L+   I D+A +YF +       R
Sbjct: 265 EIRLSDPSQYQSIVDAEWNIIYDKLDKCVESGAKVVLSRLAIGDLATQYFADRDIFCAGR 324

Query: 321 VKKEDMRHVAKATGATMVSTFADMEGEETFEASLLGYADEVVEERISDDDVVLIKGAKTT 380
           V +ED+  VA A G T+ ++  ++  E      +LG  +   E+++  +   +  G  + 
Sbjct: 325 VAEEDLNRVAAAAGGTVQTSVNNIIDE------VLGTCEIFEEKQVGGERFNIFSGCPSG 384

Query: 381 SAVSLILRGANDYMLDEMERALHDALSIVKRTLESNTVVAGGGAVESALSVYLEYLATTL 440
              +++LRG  D  ++E ER+LHDA+ IV+R ++++TVV GGGA++  +S YL   + T+
Sbjct: 385 RTATIVLRGGADQFIEEAERSLHDAIMIVRRAVKNSTVVPGGGAIDMEISKYLRQHSRTI 444

Query: 441 GSREQLAIAEFAESLLIIPKVLAVNAAKDATELVAKLRAYHHTAQTKADKKHLSSMGLDL 500
             + QL I  +A++L +IP+ L  NA  DAT+++ KLR  H     +      +S G+D+
Sbjct: 445 AGKSQLFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHAMQSGEG-----ASYGVDI 504

Query: 501 SNGTIRNNLEAGVIEPAMSKVKIIQFATEAAITILRIDDMIKLYKDET 542
           + G I ++    V EPA+ K+  I  ATEAA  IL +D+ +K  K E+
Sbjct: 505 NTGGIADSFANFVWEPAVVKINAINAATEAACLILSVDETVKNPKSES 533

[Close]

BLAST of CmoCh01G005210.1 vs. TAIR 10
Match: AT3G11830.2 (TCP-1/cpn60 chaperonin family protein )

HSP 1 Score: 310.5 bits (794), Expect = 2.8e-84
Identity = 192/528 (36.36%), Postives = 314/528 (59.47%), Query Frame = 0


Query: 21  LVGSVVACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVE 80
           LV ++ AC AV ++V+++LGP G+DK++ DD G VTI+NDGATI+K+L++ HPAAK+LV+
Sbjct: 25  LVSNINACTAVGDVVRTTLGPRGMDKLIHDDKGSVTISNDGATIMKLLDIVHPAAKILVD 84

Query: 81  LAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVEEKLA 140
           +A+ QD EVGDGTT+VV++AAE LK A   + + +H  ++I  YR A   A   V+E LA
Sbjct: 85  IAKSQDSEVGDGTTTVVLLAAEFLKEAKPFIEDGVHAQNLIRSYRTASTLAIAKVKE-LA 144

Query: 141 VKVE----KLGKDSLINCAKTSMSSKLITGDSDFFANMVVDAVQAVKMTNARGEVKYPIK 200
           V +E    +  K  L  CA T++SSKLI G+ +FFA MVVDAV A+   +        + 
Sbjct: 145 VSIEGKSVEEKKGLLAKCAATTLSSKLIGGEKEFFATMVVDAVMAIGNDDR-------LN 204

Query: 201 GINILKAHGKSAKDSYLLNGYALNSGRAAQG---MPIRVAPARIACLDFNLQKTKMQLGV 260
            I I K  G + +DS+L++G A     +  G    P +    +I  L+  L+    +   
Sbjct: 205 LIGIKKVPGGNMRDSFLVDGVAFKKTFSYAGFEQQPKKFLNPKILLLNIELELKSEKENA 264

Query: 261 QVLVSDPRELEKIRQRESDMMKERIEKLLKAGANVILTTKGIDDMALKYFVEAGAIAVRR 320
           ++ +SDP + + I   E +++ ++++K +++GA V+L+   I D+A +YF +       R
Sbjct: 265 EIRLSDPSQYQSIVDAEWNIIYDKLDKCVESGAKVVLSRLAIGDLATQYFADRDIFCAGR 324

Query: 321 VKKEDMRHVAKATGATMVSTFADMEGEETFEASLLGYADEVVEERISDDDVVLIKGAKTT 380
           V +ED+  VA A G T+ ++  ++  E      +LG  +   E+++  +   +  G  + 
Sbjct: 325 VAEEDLNRVAAAAGGTVQTSVNNIIDE------VLGTCEIFEEKQVGGERFNIFSGCPSG 384

Query: 381 SAVSLILRGANDYMLDEMERALHDALSIVKRTLESNTVVAGGGAVESALSVYLEYLATTL 440
              +++LRG  D  ++E ER+LHDA+ IV+R ++++TVV GGGA++  +S YL   + T+
Sbjct: 385 RTATIVLRGGADQFIEEAERSLHDAIMIVRRAVKNSTVVPGGGAID--ISKYLRQHSRTI 444

Query: 441 GSREQLAIAEFAESLLIIPKVLAVNAAKDATELVAKLRAYHHTAQTKADKKHLSSMGLDL 500
             + QL I  +A++L +IP+ L  NA  DAT+++ KLR  H     +      +S G+D+
Sbjct: 445 AGKSQLFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHAMQSGEG-----ASYGVDI 504

Query: 501 SNGTIRNNLEAGVIEPAMSKVKIIQFATEAAITILRIDDMIKLYKDET 542
           + G I ++    V EPA+ K+  I  ATEAA  IL +D+ +K  K E+
Sbjct: 505 NTGGIADSFANFVWEPAVVKINAINAATEAACLILSVDETVKNPKSES 531

[Close]

BLAST of CmoCh01G005210.1 vs. TAIR 10
Match: AT5G20890.1 (TCP-1/cpn60 chaperonin family protein )

HSP 1 Score: 283.5 bits (724), Expect = 3.6e-76
Identity = 186/520 (35.77%), Postives = 299/520 (57.50%), Query Frame = 0


Query: 22  VGSVVACQAVANIVKSSLGPVGLDKMLVDDIG---DVTITNDGATILKMLEVEHPAAKVL 81
           + S V   A++++VKS+LGP G+DK+L    G    VT+TNDGATILK L +++PAAKVL
Sbjct: 21  MASFVGAMAISDLVKSTLGPKGMDKIL-QSTGRGHAVTVTNDGATILKSLHIDNPAAKVL 80

Query: 82  VELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVEEK 141
           V+++++QD EVGDGTTSVV++A ELL+ A  LV +KIHP +II+GYR+A   A   + ++
Sbjct: 81  VDISKVQDDEVGDGTTSVVVLAGELLREAEKLVASKIHPMTIIAGYRMASECARNALLKR 140

Query: 142 LAVKVEKLGK--DSLINCAKTSMSSKLITGDSDFFANMVVDAVQAVK-MTNARGEVKYPI 201
           +    +   K    L+  A T++ SK+++ D + FA M VDAV  +K  TN        +
Sbjct: 141 VIDNKDNAEKFRSDLLKIAMTTLCSKILSQDKEHFAEMAVDAVFRLKGSTN--------L 200

Query: 202 KGINILKAHGKSAKDSYLLNGYALNSGRAAQGMPIRVAPARIACLDFNLQKTKMQL-GVQ 261
           + I I+K  G S KDS+L  G+ L+  +   G P R+  A I   +  +   K+++ G +
Sbjct: 201 EAIQIIKKPGGSLKDSFLDEGFILDK-KIGIGQPKRIENANILVANTAMDTDKVKIYGAR 260

Query: 262 VLVSDPRELEKIRQRESDMMKERIEKLLKAGANVILTTKGIDDMALKYFVEAGAIAVRRV 321
           V V    ++ +I   E + MK++++K++  G N  +  + I +   + F +AG +A+   
Sbjct: 261 VRVDSMTKVAEIEGAEKEKMKDKVKKIIGHGINCFVNRQLIYNFPEELFADAGILAIEHA 320

Query: 322 KKEDMRHVAKATGATMVSTFADMEGEETFEASLLGYADEVVEERISDDDVVLIKGAKTTS 381
             E +  +   TG  + STF + E  +      LG+   + E  I +D ++   G +   
Sbjct: 321 DFEGIERLGLVTGGEIASTFDNPESVK------LGHCKLIEEIMIGEDKLIHFSGCEMGQ 380

Query: 382 AVSLILRGANDYMLDEMERALHDALSIVKRTLESNTVVAGGGAVESALSVYLEYLATTLG 441
           A S++LRGA+ ++LDE ER+LHDAL ++ +T+    V+ GGG  E  ++  ++ LA    
Sbjct: 381 ACSIVLRGASHHVLDEAERSLHDALCVLSQTVNDTRVLLGGGWPEMVMAKEVDELARKTA 440

Query: 442 SREQLAIAEFAESLLIIPKVLAVNAAKDATELVAKLRAYHHTAQTKADKKHLSSMGLDLS 501
            ++  AI  F+ +L+ IP  +A NA  D+ ELVA+LRA HHT    A        G+D+ 
Sbjct: 441 GKKSHAIEAFSRALVAIPTTIADNAGLDSAELVAQLRAEHHTEGCNA--------GIDVI 500

Query: 502 NGTIRNNLEAGVIEPAMSKVKIIQFATEAAITILRIDDMI 535
            G + +  E G+ E    K  ++  ATEA+  ILR+D++I
Sbjct: 501 TGAVGDMEERGIYEAFKVKQAVLLSATEASEMILRVDEII 516

[Close]

BLAST of CmoCh01G005210.1 vs. TAIR 10
Match: AT3G18190.1 (TCP-1/cpn60 chaperonin family protein )

HSP 1 Score: 270.8 bits (691), Expect = 2.4e-72
Identity = 184/519 (35.45%), Postives = 286/519 (55.11%), Query Frame = 0


Query: 24  SVVACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAE 83
           ++ + +AV++ V++SLGP G+DKM+    G+V ITNDGATIL  +EV  PAAK+LVEL++
Sbjct: 33  NINSARAVSDAVRTSLGPKGMDKMISTANGEVIITNDGATILNKMEVLQPAAKMLVELSK 92

Query: 84  LQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVEEKLAVKV 143
            QD   GDGTT+VV++A  LLK    L+ N IHPT I      A  +A   +   +AV V
Sbjct: 93  SQDSAAGDGTTTVVVIAGALLKECQSLLTNGIHPTVISDSLHKACGKAID-ILTAMAVPV 152

Query: 144 EKLGKDSLINCAKTSMSSKLITGDSDFFANMVVDAVQAVKMTNARGEVKYPIKGINILKA 203
           E   +DSL+  A TS++SK+++  S   A + VDAV +V +   + E+   ++ I I+K 
Sbjct: 153 ELTDRDSLVKSASTSLNSKVVSQYSTLLAPLAVDAVLSV-IDPEKPEI-VDLRDIKIVKK 212

Query: 204 HGKSAKDSYLLNGYALNS--GRAAQGMPIRVAPARIACLDFNLQKTKMQLGVQVLVSDPR 263
            G +  D++ + G   +    RAA G P RV  A+IA + F +   K  +   ++VSD  
Sbjct: 213 LGGTVDDTHTVKGLVFDKKVSRAAGG-PTRVENAKIAVIQFQISPPKTDIEQSIVVSDYT 272

Query: 264 ELEKIRQRESDMMKERIEKLLKAGANVILTTKGI-----DDMALKYFVEAGAIAVRRVKK 323
           ++++I + E + +   I+K+   G NV+L  K I      D++L Y  +A  + ++ V++
Sbjct: 273 QMDRILKEERNYILGMIKKIKATGCNVLLIQKSILRDAVTDLSLHYLAKAKIMVIKDVER 332

Query: 324 EDMRHVAKATGATMVSTFADMEGEETFEASLLGYADEVVEERISDDDVVLIKGAKTTS-A 383
           +++  V K      ++        E F A  LG+AD V E  + D  ++ I G K     
Sbjct: 333 DEIEFVTKTLNCLPIANI------EHFRAEKLGHADLVEEASLGDGKILKITGIKDMGRT 392

Query: 384 VSLILRGANDYMLDEMERALHDALSIVKRTLESNTVVAGGGAVESALSVYLEYLATTLGS 443
            S+++RG+N  +LDE ER+LHDAL +V+  +    ++AGGGA E  LS  L   A  L  
Sbjct: 393 TSVLVRGSNQLVLDEAERSLHDALCVVRCLVSKRFLIAGGGAPEIELSRQLGAWAKVLHG 452

Query: 444 REQLAIAEFAESLLIIPKVLAVNAAKDATELVAKLRAYHHTAQTKADKKHLSSMGLDLSN 503
            E   +  FAE+L +IP  LA NA  +   +V +LR  H   +  A        G+++  
Sbjct: 453 MEGYCVKSFAEALEVIPYTLAENAGLNPIAIVTELRNKHAQGEINA--------GINVRK 512

Query: 504 GTIRNNLEAGVIEPAMSKVKIIQFATEAAITILRIDDMI 535
           G I N LE  V++P +     I  ATE    IL+IDD++
Sbjct: 513 GQITNILEENVVQPLLVSTSAITLATECVRMILKIDDIV 533

The following BLAST results are available for this feature:

BLAST of CmoCh01G005210.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P28769	2.2e-259	90.61	T-complex protein 1 subunit alpha OS=Arabidopsis thaliana OX=3702 GN=CCT1 PE=1 S...	[more]
P17987	3.4e-196	67.75	T-complex protein 1 subunit alpha OS=Homo sapiens OX=9606 GN=TCP1 PE=1 SV=1	[more]
P18279	9.9e-196	68.01	T-complex protein 1 subunit alpha OS=Cricetulus griseus OX=10029 GN=TCP1 PE=2 SV...	[more]
Q4R5G2	2.2e-195	67.56	T-complex protein 1 subunit alpha OS=Macaca fascicularis OX=9541 GN=TCP1 PE=2 SV...	[more]
Q9XT06	3.8e-195	67.75	T-complex protein 1 subunit alpha OS=Monodelphis domestica OX=13616 GN=TCP1 PE=2...	[more]

BLAST of CmoCh01G005210.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GBK3	5.7e-279	99.81	CCT-alpha OS=Cucurbita moschata OX=3662 GN=LOC111452480 PE=3 SV=1	[more]
A0A6J1K8Y1	1.1e-277	99.23	CCT-alpha OS=Cucurbita maxima OX=3661 GN=LOC111492751 PE=3 SV=1	[more]
A0A6J1CTJ9	6.5e-275	97.51	CCT-alpha OS=Momordica charantia OX=3673 GN=LOC111014169 PE=3 SV=1	[more]
A0A5D3DFG1	7.2e-274	96.93	CCT-alpha OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold333G00750 PE=3...	[more]
A0A1S3B4R0	7.2e-274	96.93	CCT-alpha OS=Cucumis melo OX=3656 GN=LOC103485803 PE=3 SV=1	[more]

BLAST of CmoCh01G005210.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022949009.1	1.2e-278	99.81	T-complex protein 1 subunit alpha [Cucurbita moschata] >KAG6607133.1 T-complex p...	[more]
XP_023524959.1	4.5e-278	99.62	T-complex protein 1 subunit alpha [Cucurbita pepo subsp. pepo] >KAG7036823.1 T-c...	[more]
XP_022997956.1	2.2e-277	99.23	T-complex protein 1 subunit alpha [Cucurbita maxima]	[more]
XP_022144491.1	1.3e-274	97.51	T-complex protein 1 subunit alpha [Momordica charantia]	[more]
XP_008441727.1	1.5e-273	96.93	PREDICTED: T-complex protein 1 subunit alpha [Cucumis melo] >TYK22198.1 T-comple...	[more]

BLAST of CmoCh01G005210.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G20050.1	1.5e-260	90.61	T-complex protein 1 alpha subunit	[more]
AT3G11830.1	1.5e-85	36.36	TCP-1/cpn60 chaperonin family protein	[more]
AT3G11830.2	2.8e-84	36.36	TCP-1/cpn60 chaperonin family protein	[more]
AT5G20890.1	3.6e-76	35.77	TCP-1/cpn60 chaperonin family protein	[more]
AT3G18190.1	2.4e-72	35.45	TCP-1/cpn60 chaperonin family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR017998	Chaperone tailless complex polypeptide 1 (TCP-1)	PRINTS	PR00304	TCOMPLEXTCP1	coord: 411..423 score: 44.71 coord: 33..49 score: 44.47 coord: 85..104 score: 45.99 coord: 55..73 score: 48.02 coord: 377..399 score: 33.15
IPR017998	Chaperone tailless complex polypeptide 1 (TCP-1)	PANTHER	PTHR11353	CHAPERONIN	coord: 24..542
IPR002423	Chaperonin Cpn60/TCP-1 family	PFAM	PF00118	Cpn60_TCP1	coord: 31..535 e-value: 6.3E-156 score: 519.8
IPR027413	GroEL-like equatorial domain superfamily	GENE3D	1.10.560.10		coord: 28..535 e-value: 8.1E-176 score: 587.7
IPR027413	GroEL-like equatorial domain superfamily	SUPERFAMILY	48592	GroEL equatorial domain-like	coord: 24..535
IPR027409	GroEL-like apical domain superfamily	GENE3D	3.50.7.10	GroEL	coord: 215..373 e-value: 8.1E-176 score: 587.7
IPR027409	GroEL-like apical domain superfamily	SUPERFAMILY	52029	GroEL apical domain-like	coord: 210..382
IPR027410	TCP-1-like chaperonin intermediate domain superfamily	GENE3D	3.30.260.10		coord: 140..409 e-value: 8.1E-176 score: 587.7
IPR027410	TCP-1-like chaperonin intermediate domain superfamily	SUPERFAMILY	54849	GroEL-intermediate domain like	coord: 147..409
IPR012715	T-complex protein 1, alpha subunit	TIGRFAM	TIGR02340	TIGR02340	coord: 25..542 e-value: 5.6E-276 score: 914.4
IPR012715	T-complex protein 1, alpha subunit	CDD	cd03335	TCP1_alpha	coord: 25..536 e-value: 0.0 score: 977.536
None	No IPR available	PANTHER	PTHR11353:SF203	BNAC05G32480D PROTEIN	coord: 24..542
None	No IPR available	PROSITE	PS51257	PROKAR_LIPOPROTEIN	coord: 1..28 score: 5.0
IPR002194	Chaperonin TCP-1, conserved site	PROSITE	PS00750	TCP1_1	coord: 36..48
IPR002194	Chaperonin TCP-1, conserved site	PROSITE	PS00751	TCP1_2	coord: 57..73
IPR002194	Chaperonin TCP-1, conserved site	PROSITE	PS00995	TCP1_3	coord: 85..93

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmoCh01G005210	CmoCh01G005210	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh01G005210.1:exon:3311	CmoCh01G005210.1:exon:3311	exon
CmoCh01G005210.1:exon:3310	CmoCh01G005210.1:exon:3310	exon
CmoCh01G005210.1:exon:3309	CmoCh01G005210.1:exon:3309	exon
CmoCh01G005210.1:exon:3308	CmoCh01G005210.1:exon:3308	exon
CmoCh01G005210.1:exon:3307	CmoCh01G005210.1:exon:3307	exon
CmoCh01G005210.1:exon:3306	CmoCh01G005210.1:exon:3306	exon
CmoCh01G005210.1:exon:3305	CmoCh01G005210.1:exon:3305	exon
CmoCh01G005210.1:exon:3304	CmoCh01G005210.1:exon:3304	exon
CmoCh01G005210.1:exon:3303	CmoCh01G005210.1:exon:3303	exon
CmoCh01G005210.1:exon:3302	CmoCh01G005210.1:exon:3302	exon
CmoCh01G005210.1:exon:3301	CmoCh01G005210.1:exon:3301	exon
CmoCh01G005210.1:exon:3300	CmoCh01G005210.1:exon:3300	exon
CmoCh01G005210.1:exon:3299	CmoCh01G005210.1:exon:3299	exon
CmoCh01G005210.1:exon:3298	CmoCh01G005210.1:exon:3298	exon
CmoCh01G005210.1:exon:3297	CmoCh01G005210.1:exon:3297	exon
CmoCh01G005210.1:exon:3296	CmoCh01G005210.1:exon:3296	exon
CmoCh01G005210.1:exon:3295	CmoCh01G005210.1:exon:3295	exon
CmoCh01G005210.1:exon:3294	CmoCh01G005210.1:exon:3294	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh01G005210.1:three_prime_utr	CmoCh01G005210.1:three_prime_utr_2	three_prime_UTR
CmoCh01G005210.1:three_prime_utr	CmoCh01G005210.1:three_prime_utr	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh01G005210.1:cds	CmoCh01G005210.1:cds_17	CDS
CmoCh01G005210.1:cds	CmoCh01G005210.1:cds_16	CDS
CmoCh01G005210.1:cds	CmoCh01G005210.1:cds_15	CDS
CmoCh01G005210.1:cds	CmoCh01G005210.1:cds_14	CDS
CmoCh01G005210.1:cds	CmoCh01G005210.1:cds_13	CDS
CmoCh01G005210.1:cds	CmoCh01G005210.1:cds_12	CDS
CmoCh01G005210.1:cds	CmoCh01G005210.1:cds_11	CDS
CmoCh01G005210.1:cds	CmoCh01G005210.1:cds_10	CDS
CmoCh01G005210.1:cds	CmoCh01G005210.1:cds_9	CDS
CmoCh01G005210.1:cds	CmoCh01G005210.1:cds_8	CDS
CmoCh01G005210.1:cds	CmoCh01G005210.1:cds_7	CDS
CmoCh01G005210.1:cds	CmoCh01G005210.1:cds_6	CDS
CmoCh01G005210.1:cds	CmoCh01G005210.1:cds_5	CDS
CmoCh01G005210.1:cds	CmoCh01G005210.1:cds_4	CDS
CmoCh01G005210.1:cds	CmoCh01G005210.1:cds_3	CDS
CmoCh01G005210.1:cds	CmoCh01G005210.1:cds_2	CDS
CmoCh01G005210.1:cds	CmoCh01G005210.1:cds	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmoCh01G005210.1	CmoCh01G005210.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006457	protein folding
cellular_component	GO:0005832	chaperonin-containing T-complex
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016887	ATP hydrolysis activity
molecular_function	GO:0051082	unfolded protein binding