Cmc12g0317641.1 (mRNA) Melon (Charmono) v1.1

Overview
NameCmc12g0317641.1
TypemRNA
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionUnknown protein
LocationCMiso1.1chr12: 2919146 .. 2921681 (+)
Sequence length2536
RNA-Seq ExpressionCmc12g0317641.1
SyntenyCmc12g0317641.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CACACATATATATATATATAATTAATTAATTGACCATGGACATGGACTTGAGATACCATATCTTTATCTTTAGACTAAAACGTTAAACAAAAAAGAGTTGAGCTAAAGAGCATAATGATTTAAGTAAACAAAAGGTTTCTCATACATAATGTCCCCACCAATATGGATACAAAATTTACAATACAAAATAATCAATCAATCAATCAAAAAGGAAAAAAGGAAACAAAACATAATCAATTTGATTTGTACACGTCACTAAAATTATATCCTCACACATCACCTTTTAAAATTTGACCTTTTTCGCCGTCCTCATCCACTCCGCCGCCCACCGTGAAAATGGTACGGCGACGACGACAACGACGACGACGAAGAAACACTCCCTCCCGAGTTCCCATCGCCGTGAAGCAAATCCGACAAGTAATTCCCTAAATCATCCGGTGCAAATCTTACCTCCGATTCACTTCCGTAAAGATTCTCCAATCGCGACCGGTTATTGATATAGAACTCACCGTAAAGCGTACCCAGTTTCTTCCCCAATGAGATCTTGATATGCTCTCTAAGCTTCGAATCCGTCACGACCCACGATACTTGATGTCTGTACGCTTCTTCAAACGCTATATTGAAATCATGGAAGTGTTTTCTTGCTCTTTCCGGTGAGATTTCCGCCATTGGATTCTCCGGCAACGATAAGAACACTCTACTCCATCCCATCCGTTGGTAACTCGAAGCGTACTGCCTCACCTTCGTTTCATGGCTCTCGATCCACTCATCTCCAAGAACGAATCGGAGATTTGAGGTTCGTACTTTCACGACGATGTACTCGAGATTGTTAGCGAGGAAGATGTACGATAGAGGCGCGTCGTGGTAGAGCTCTGCTTTGCTATCGAGCTTTGAGAGAAGGACTAGAATCAACCAAGCCATGCGTATGGTGAGAGGATTTTCTTCTGAATCGTTACCGCCGAAGAAGGATTCCGGTAATGGAGAATGAAGAATCAACGGCCAATCGGCGACGATTCCGGGGAGGATTCCACTGTAGTCGCTGAGGAAGGCGATGTAGTTCATCACGTAACGAGTGAGTGGATGAACTCCACCGCCTGGTACTGGGGTTTTGGAGGAATCTTTTTGGATATGAGATTCAAAATCGATGAGCATGGAGCGGATGCTTTCGGCGATTTTTGTTAACGAATGATCGATTAAGGATCTGACGGAGGCTGTTGATTCGTAGATGAACATCGATTCGATTTCCGGCCATAGATCGAAAATGGCTTCGTACAGATCAAGAATCAAGAAAATTTTCTCCGGCGTTTTCTTCGATTTCACAGCCATTTCCGGGAAGCTAAAGAGAGTTAGAGCACTTTCTTTGGTGATTTCTGAGAAAACAGATTCTCTAATCGAAGCAGAACTGGAGAAAACTTGATCGGAAAGGAATTTCTCCGCTTCAAAGAAAGTTTTCACAGCAATTTTAACAGCATTCAACCAGTTCTTAATCTTCACTTCCAAAACTTCCCACTCCATCCTATGAACATGATGATAATTGGTTTTCGCAACTCCAAGATTATACAGACCTTCCTCAACAATCGATTTCCTACCAACAACATAAATCTTCACACACTCTTTACCATAACCAGCAGAAATCATACCTTCCGCAATGGATTTCAAATCCTTAATAGCCGATCTCGAAATCCGCTCCTGTTCACTAACATTATTCTCATTCGCAAATCGTAAATCATCTTCACTCTCATCTTCCAAATCAGAATTCCCAGTCAAAACAGAATCTCTGGACGAACGATTCGAGATCGATTCCGGATCCAAATGCGCTCGATTCTCCGCTAAAATCCGATGAAACTCCCTCTGCAACCTCTTCATAGCAGTCTGCATCAAATTCTGAGCACGAACAAGATGGTGAGAATTCATACGCTCGGAGCCGAAATACTGCATCGCTGTTTGCAAATCCTTGACGGCTTTGAGGTACTGATTGGCCTCGTAGCGGTCGTCTTGAAACAGAGGAGTGATGTCGGCATAAGACGAAGCAGTACAATCCCATTTTGTGATTAGGGTTTCAGCAACGTCGATGTTCTCTTCCATTAGAGACTGGCAGAGGCCGTGAGACGGCGGAGAATGCGGCGGGGGGGAATGAGACGGGGTGGAACGAGCAGGAGATTTGAAGAAATGGTTTCTCATGGTTGAAGAAGAGAGGGAAAAGGGGGGCTGAGTTTGGGAATGGGTATGGAGGGGAAGAGAAACTGAAGGGGGGAATTTATGGAGAGAATAAATGAAGAAAGAAAGGGACTTATATGAGGAAGGTTCTTCCATGGATGAGGTTGAAGAAGCTTTTTGGACCTTTTTGACTGAGGCTTTTTTGTCTTATGAAGCAACTTGAATTAGTCAACTTTTTTTTTTCTTTTTAATTAATATTTTTGTTGGTCAACATTGTTGCCGTTCTTGATTGTTGTTTTATTTGACCAAAACGACTCGTTTCATGTAGATTGAGAACACTAAATTAATGAAGAAAACAAAATTAGGATTGTGATTACTT

mRNA sequence

CACACATATATATATATATAATTAATTAATTGACCATGGACATGGACTTGAGATACCATATCTTTATCTTTAGACTAAAACGTTAAACAAAAAAGAGTTGAGCTAAAGAGCATAATGATTTAAGTAAACAAAAGGTTTCTCATACATAATGTCCCCACCAATATGGATACAAAATTTACAATACAAAATAATCAATCAATCAATCAAAAAGGAAAAAAGGAAACAAAACATAATCAATTTGATTTGTACACGTCACTAAAATTATATCCTCACACATCACCTTTTAAAATTTGACCTTTTTCGCCGTCCTCATCCACTCCGCCGCCCACCGTGAAAATGGTACGGCGACGACGACAACGACGACGACGAAGAAACACTCCCTCCCGAGTTCCCATCGCCGTGAAGCAAATCCGACAAGTAATTCCCTAAATCATCCGGTGCAAATCTTACCTCCGATTCACTTCCGTAAAGATTCTCCAATCGCGACCGGTTATTGATATAGAACTCACCGTAAAGCGTACCCAGTTTCTTCCCCAATGAGATCTTGATATGCTCTCTAAGCTTCGAATCCGTCACGACCCACGATACTTGATGTCTGTACGCTTCTTCAAACGCTATATTGAAATCATGGAAGTGTTTTCTTGCTCTTTCCGGTGAGATTTCCGCCATTGGATTCTCCGGCAACGATAAGAACACTCTACTCCATCCCATCCGTTGGTAACTCGAAGCGTACTGCCTCACCTTCGTTTCATGGCTCTCGATCCACTCATCTCCAAGAACGAATCGGAGATTTGAGGTTCGTACTTTCACGACGATGTACTCGAGATTGTTAGCGAGGAAGATGTACGATAGAGGCGCGTCGTGGTAGAGCTCTGCTTTGCTATCGAGCTTTGAGAGAAGGACTAGAATCAACCAAGCCATGCGTATGGTGAGAGGATTTTCTTCTGAATCGTTACCGCCGAAGAAGGATTCCGGTAATGGAGAATGAAGAATCAACGGCCAATCGGCGACGATTCCGGGGAGGATTCCACTGTAGTCGCTGAGGAAGGCGATGTAGTTCATCACGTAACGAGTGAGTGGATGAACTCCACCGCCTGGTACTGGGGTTTTGGAGGAATCTTTTTGGATATGAGATTCAAAATCGATGAGCATGGAGCGGATGCTTTCGGCGATTTTTGTTAACGAATGATCGATTAAGGATCTGACGGAGGCTGTTGATTCGTAGATGAACATCGATTCGATTTCCGGCCATAGATCGAAAATGGCTTCGTACAGATCAAGAATCAAGAAAATTTTCTCCGGCGTTTTCTTCGATTTCACAGCCATTTCCGGGAAGCTAAAGAGAGTTAGAGCACTTTCTTTGGTGATTTCTGAGAAAACAGATTCTCTAATCGAAGCAGAACTGGAGAAAACTTGATCGGAAAGGAATTTCTCCGCTTCAAAGAAAGTTTTCACAGCAATTTTAACAGCATTCAACCAGTTCTTAATCTTCACTTCCAAAACTTCCCACTCCATCCTATGAACATGATGATAATTGGTTTTCGCAACTCCAAGATTATACAGACCTTCCTCAACAATCGATTTCCTACCAACAACATAAATCTTCACACACTCTTTACCATAACCAGCAGAAATCATACCTTCCGCAATGGATTTCAAATCCTTAATAGCCGATCTCGAAATCCGCTCCTGTTCACTAACATTATTCTCATTCGCAAATCGTAAATCATCTTCACTCTCATCTTCCAAATCAGAATTCCCAGTCAAAACAGAATCTCTGGACGAACGATTCGAGATCGATTCCGGATCCAAATGCGCTCGATTCTCCGCTAAAATCCGATGAAACTCCCTCTGCAACCTCTTCATAGCAGTCTGCATCAAATTCTGAGCACGAACAAGATGGTGAGAATTCATACGCTCGGAGCCGAAATACTGCATCGCTGTTTGCAAATCCTTGACGGCTTTGAGGTACTGATTGGCCTCGTAGCGGTCGTCTTGAAACAGAGGAGTGATGTCGGCATAAGACGAAGCAGTACAATCCCATTTTGTGATTAGGGTTTCAGCAACGTCGATGTTCTCTTCCATTAGAGACTGGCAGAGGCCGTGAGACGGCGGAGAATGCGGCGGGGGGGAATGAGACGGGGTGGAACGAGCAGGAGATTTGAAGAAATGGTTTCTCATGGTTGAAGAAGAGAGGGAAAAGGGGGGCTGAGTTTGGGAATGGGTATGGAGGGGAAGAGAAACTGAAGGGGGGAATTTATGGAGAGAATAAATGAAGAAAGAAAGGGACTTATATGAGGAAGGTTCTTCCATGGATGAGGTTGAAGAAGCTTTTTGGACCTTTTTGACTGAGGCTTTTTTGTCTTATGAAGCAACTTGAATTAGTCAACTTTTTTTTTTCTTTTTAATTAATATTTTTGTTGGTCAACATTGTTGCCGTTCTTGATTGTTGTTTTATTTGACCAAAACGACTCGTTTCATGTAGATTGAGAACACTAAATTAATGAAGAAAACAAAATTAGGATTGTGATTACTT

Coding sequence (CDS)

ATGAAGAATCAACGGCCAATCGGCGACGATTCCGGGGAGGATTCCACTGTAGTCGCTGAGGAAGGCGATGTAGTTCATCACGTAACGAGTGAGTGGATGAACTCCACCGCCTGGTACTGGGGTTTTGGAGGAATCTTTTTGGATATGAGATTCAAAATCGATGAGCATGGAGCGGATGCTTTCGGCGATTTTTGTTAA

Protein sequence

MKNQRPIGDDSGEDSTVVAEEGDVVHHVTSEWMNSTAWYWGFGGIFLDMRFKIDEHGADAFGDFC
Homology
The following BLAST results are available for this feature:
BLAST of Cmc12g0317641.1 vs.
Match NameE-valueIdentityDescription
BLAST of Cmc12g0317641.1 vs.
Match NameE-valueIdentityDescription
BLAST of Cmc12g0317641.1 vs.
Match NameE-valueIdentityDescription
BLAST of Cmc12g0317641.1 vs.
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cmc12g0317641Cmc12g0317641gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cmc12g0317641.1-exonCmc12g0317641.1-exon-CMiso1.1chr12:2919146..2921681exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cmc12g0317641.1-five_prime_utrCmc12g0317641.1-five_prime_utr-CMiso1.1chr12:2919146..2920129five_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cmc12g0317641.1-cdsCmc12g0317641.1-cds-CMiso1.1chr12:2920130..2920327CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cmc12g0317641.1-three_prime_utrCmc12g0317641.1-three_prime_utr-CMiso1.1chr12:2920328..2921681three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cmc12g0317641.1Cmc12g0317641.1-proteinpolypeptide