Cmc11g0308751.1 (mRNA) Melon (Charmono) v1.1

Overview
NameCmc11g0308751.1
TypemRNA
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionUnknown protein
LocationCMiso1.1chr11: 29675721 .. 29677240 (+)
Sequence length1520
RNA-Seq ExpressionCmc11g0308751.1
SyntenyCmc11g0308751.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CAAACAAACACAATAATAATTTTAAAATTCAACAATTCTCAAAACATAATATTACATTTAACAAAAATAATAATATACAAAAGTAGAGAACGTGGCTTGCAGGTAATAGGAGCGGCGGCCACGTGACAAACTGATGCAATTACCTCACCACTCTCTACATATATTTTGTACAACCAAAGACTTGGTTTTCGGAAAACGACGTATCGGTTTCTCATTACAGCCGTTGAATACGCACTTTTTCCGGCTCCCATCCATCACCTTCTGTCTCTCCTCCGATTTGTCGTTTTTCATATATATATATATATATATATATATTTTTTTTTTTTTTACCAATTCCCTCGCACTTGCCGTTAGTACCGTTTGATTTGTATGGGCCCAAAGCCCATTTCCAAGCTAATGCACGGTCCTAGACGTGGGCAGATTTAGATGAGGACACGTGGCTTGTTTGACGTAAGGTTTGGATTGGATCCACCGGCAACCGTTGGATTGAAAGGGTAGAAAGGAAAATTAAATGAGAAGATACTCAGAATCTTCCACTCAACGGATCTTTACACACCGACAGTTAATTGAGCTGTTTAATCAAAAGCTTGGAAAGAATAAGGAAAAAAGAAAAAGTAATAATGCCTTCTTGATCTTATCATTAGGGGGCAACGTTAAACTAACATTTTAAAATAAGTTCAACTCGGTATATTAATGATATCATATGACTATTGCATAAATTTTTTTTTTTTATTTTTGTAAATGCTTCATTTTTCATTTTATAAATAAATAAATTTTAACTATGAAGTTGATAGACCAAACACGTGCTTGTGACTTGAAGATTTGTGAACGAACTGCTTTTTTATGGATAATTTGAAATATGATGTTGAATGGATTGTCTTTTTTTTTTTTTAAAAAAAAAAAGATTTTCAATTTCAATGTTGATCAAGAAAACACTTTTTTGTTTGTTGTTTTTTAATGTTTTAAGTTCATAATAAGACTACACATTTATTCCTACTTTTCTTTCATATAAAATAACAATATATATTCCCTATTGTAAGGGGTTGTGCTTTAGAAGTGTGACTAAAAAAGCATACACATCTTTTAAGCTTCAAAAAAGTATGTTCTTTTTCAACACAACTTTAGTACAATTAACAACTAAGAAAAAGCATTTACATCATAATTATAAGATGGAATATTCAAATCACAGGCTTTCTTTTTCTTTTTTTTTTAATTTAAAATAAAAATCTTTCAAATCTACGATAGTTATAAAGTTGGAGAAATACATATATTTGAGTCATCTAGTTTTAGAATTAAAAGTGATATAGCTACAACTACCCGGTACTCTTATTAGTAGTTTTTACAATGTCTTAATAAAACATGTACAAGGTAAAAAATTAATAGATCTAATCTATCTTAAGTAGATAAAATCTATTTTTAGGATAAATGAACAAGAGGTTTTCAAATATAAGAAAGAAACTAAAACTATTTACACTATAGCAAAATCATTAAATTCCTTTTAGCTTATTTGAGTCATCTAT

mRNA sequence

CAAACAAACACAATAATAATTTTAAAATTCAACAATTCTCAAAACATAATATTACATTTAACAAAAATAATAATATACAAAAGTAGAGAACGTGGCTTGCAGGTAATAGGAGCGGCGGCCACGTGACAAACTGATGCAATTACCTCACCACTCTCTACATATATTTTGTACAACCAAAGACTTGGTTTTCGGAAAACGACGTATCGGTTTCTCATTACAGCCGTTGAATACGCACTTTTTCCGGCTCCCATCCATCACCTTCTGTCTCTCCTCCGATTTGTCGTTTTTCATATATATATATATATATATATATATTTTTTTTTTTTTTACCAATTCCCTCGCACTTGCCGTTAGTACCGTTTGATTTGTATGGGCCCAAAGCCCATTTCCAAGCTAATGCACGGTCCTAGACGTGGGCAGATTTAGATGAGGACACGTGGCTTGTTTGACGTAAGGTTTGGATTGGATCCACCGGCAACCGTTGGATTGAAAGGGTAGAAAGGAAAATTAAATGAGAAGATACTCAGAATCTTCCACTCAACGGATCTTTACACACCGACAGTTAATTGAGCTGTTTAATCAAAAGCTTGGAAAGAATAAGGAAAAAAGAAAAAGTAATAATGCCTTCTTGATCTTATCATTAGGGGGCAACGTTAAACTAACATTTTAAAATAAGTTCAACTCGGTATATTAATGATATCATATGACTATTGCATAAATTTTTTTTTTTTATTTTTGTAAATGCTTCATTTTTCATTTTATAAATAAATAAATTTTAACTATGAAGTTGATAGACCAAACACGTGCTTGTGACTTGAAGATTTGTGAACGAACTGCTTTTTTATGGATAATTTGAAATATGATGTTGAATGGATTGTCTTTTTTTTTTTTTAAAAAAAAAAAGATTTTCAATTTCAATGTTGATCAAGAAAACACTTTTTTGTTTGTTGTTTTTTAATGTTTTAAGTTCATAATAAGACTACACATTTATTCCTACTTTTCTTTCATATAAAATAACAATATATATTCCCTATTGTAAGGGGTTGTGCTTTAGAAGTGTGACTAAAAAAGCATACACATCTTTTAAGCTTCAAAAAAGTATGTTCTTTTTCAACACAACTTTAGTACAATTAACAACTAAGAAAAAGCATTTACATCATAATTATAAGATGGAATATTCAAATCACAGGCTTTCTTTTTCTTTTTTTTTTAATTTAAAATAAAAATCTTTCAAATCTACGATAGTTATAAAGTTGGAGAAATACATATATTTGAGTCATCTAGTTTTAGAATTAAAAGTGATATAGCTACAACTACCCGGTACTCTTATTAGTAGTTTTTACAATGTCTTAATAAAACATGTACAAGGTAAAAAATTAATAGATCTAATCTATCTTAAGTAGATAAAATCTATTTTTAGGATAAATGAACAAGAGGTTTTCAAATATAAGAAAGAAACTAAAACTATTTACACTATAGCAAAATCATTAAATTCCTTTTAGCTTATTTGAGTCATCTAT

Coding sequence (CDS)

ATGCAATTACCTCACCACTCTCTACATATATTTTGTACAACCAAAGACTTGGTTTTCGGAAAACGACGTATCGGTTTCTCATTACAGCCGTTGAATACGCACTTTTTCCGGCTCCCATCCATCACCTTCTGTCTCTCCTCCGATTTGTCGTTTTTCATATATATATATATATATATATATATTTTTTTTTTTTTTACCAATTCCCTCGCACTTGCCGTTAGTACCGTTTGA

Protein sequence

MQLPHHSLHIFCTTKDLVFGKRRIGFSLQPLNTHFFRLPSITFCLSSDLSFFIYIYIYIYIFFFFTNSLALAVSTV
Homology
The following BLAST results are available for this feature:
BLAST of Cmc11g0308751.1 vs.
Match NameE-valueIdentityDescription
BLAST of Cmc11g0308751.1 vs.
Match NameE-valueIdentityDescription
BLAST of Cmc11g0308751.1 vs.
Match NameE-valueIdentityDescription
BLAST of Cmc11g0308751.1 vs.
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cmc11g0308751Cmc11g0308751gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cmc11g0308751.1-exonCmc11g0308751.1-exon-CMiso1.1chr11:29675721..29677240exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cmc11g0308751.1-five_prime_utrCmc11g0308751.1-five_prime_utr-CMiso1.1chr11:29675721..29675853five_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cmc11g0308751.1-cdsCmc11g0308751.1-cds-CMiso1.1chr11:29675854..29676084CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cmc11g0308751.1-three_prime_utrCmc11g0308751.1-three_prime_utr-CMiso1.1chr11:29676085..29677240three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cmc11g0308751.1Cmc11g0308751.1-proteinpolypeptide