Cmc11g0302051.1 (mRNA) Melon (Charmono) v1.1

Overview


Name	Cmc11g0302051.1
Type	mRNA
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Gag-pol polyprotein
Location	CMiso1.1chr11: 22763502 .. 22763816 (+)
Sequence length	315
RNA-Seq Expression	Cmc11g0302051.1
Synteny	Cmc11g0302051.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATCGAGAGTCTATTATACTTAACGGTCAGTAGGCCTGACATTGCTTATGCCATTGGAATATGTCCTCGATTTCAGTTTGATCAGTGTGCCTTACACTTAGCAGCGGTCAAAAGGATAATTAAGTATGTCCACGGAACAAGTGATTTTGGAATTTTATATTCCTATGGTACGAATTTTATTCTGGTTGGATATTGCGATGTGGACTGGGCCGGTTCTTCTGATGACAGAAAAAGCACCTCTGGAGGATGTTTCTTTCTAGGAAACAATCTCATCTCATGGTTCAGTAAAAAAAAATTGTGTATCTCTTTCTAA

mRNA sequence

ATGATCGAGAGTCTATTATACTTAACGGTCAGTAGGCCTGACATTGCTTATGCCATTGGAATATGTCCTCGATTTCAGTTTGATCAGTGTGCCTTACACTTAGCAGCGGTCAAAAGGATAATTAAGTATGTCCACGGAACAAGTGATTTTGGAATTTTATATTCCTATGGTACGAATTTTATTCTGGTTGGATATTGCGATGTGGACTGGGCCGGTTCTTCTGATGACAGAAAAAGCACCTCTGGAGGATGTTTCTTTCTAGGAAACAATCTCATCTCATGGTTCAGTAAAAAAAAATTGTGTATCTCTTTCTAA

Coding sequence (CDS)

ATGATCGAGAGTCTATTATACTTAACGGTCAGTAGGCCTGACATTGCTTATGCCATTGGAATATGTCCTCGATTTCAGTTTGATCAGTGTGCCTTACACTTAGCAGCGGTCAAAAGGATAATTAAGTATGTCCACGGAACAAGTGATTTTGGAATTTTATATTCCTATGGTACGAATTTTATTCTGGTTGGATATTGCGATGTGGACTGGGCCGGTTCTTCTGATGACAGAAAAAGCACCTCTGGAGGATGTTTCTTTCTAGGAAACAATCTCATCTCATGGTTCAGTAAAAAAAAATTGTGTATCTCTTTCTAA

Protein sequence

MIESLLYLTVSRPDIAYAIGICPRFQFDQCALHLAAVKRIIKYVHGTSDFGILYSYGTNFILVGYCDVDWAGSSDDRKSTSGGCFFLGNNLISWFSKKKLCISF

Homology

[Close]

BLAST of Cmc11g0302051.1 vs. NCBI nr
Match: TYK18114.1 (putative gag-pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 175.3 bits (443), Expect = 2.8e-40
Identity = 81/103 (78.64%), Postives = 90/103 (87.38%), Query Frame = 0


Query: 1   MIESLLYLTVSRPDIAYAIGICPRFQFDQCALHLAAVKRIIKYVHGTSDFGILYSYGTNF 60
           +IESLL+LT SRPDIAYA+GIC R+Q D    HL AVKRI+KYVHGTSDFGILYSY T  
Sbjct: 280 IIESLLHLTASRPDIAYAVGICVRYQTDPQMSHLEAVKRILKYVHGTSDFGILYSYDTTS 339

Query: 61  ILVGYCDVDWAGSSDDRKSTSGGCFFLGNNLISWFSKKKLCIS 104
           ILVGYCD DWAGS+DDRK+TSGGCFFLGNNLISWFSKK+ C+S
Sbjct: 340 ILVGYCDADWAGSTDDRKTTSGGCFFLGNNLISWFSKKQNCVS 382

[Close]

BLAST of Cmc11g0302051.1 vs. NCBI nr
Match: KAA0068014.1 (putative gag-pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 175.3 bits (443), Expect = 2.8e-40
Identity = 81/103 (78.64%), Postives = 90/103 (87.38%), Query Frame = 0


Query: 1   MIESLLYLTVSRPDIAYAIGICPRFQFDQCALHLAAVKRIIKYVHGTSDFGILYSYGTNF 60
           +IESLL+LT SRPDIAYA+GIC R+Q D    HL AVKRI+KYVHGTSDFGILYSY T  
Sbjct: 280 IIESLLHLTASRPDIAYAVGICVRYQTDPQMSHLEAVKRILKYVHGTSDFGILYSYDTTS 339

Query: 61  ILVGYCDVDWAGSSDDRKSTSGGCFFLGNNLISWFSKKKLCIS 104
           ILVGYCD DWAGS+DDRK+TSGGCFFLGNNLISWFSKK+ C+S
Sbjct: 340 ILVGYCDADWAGSTDDRKTTSGGCFFLGNNLISWFSKKQNCVS 382

[Close]

BLAST of Cmc11g0302051.1 vs. NCBI nr
Match: KAA0036888.1 (putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 170.2 bits (430), Expect = 9.1e-39
Identity = 80/102 (78.43%), Postives = 86/102 (84.31%), Query Frame = 0


Query: 1   MIESLLYLTVSRPDIAYAIGICPRFQFDQCALHLAAVKRIIKYVHGTSDFGILYSYGTNF 60
           +I SLLYLT S+PDIAYAIGIC R+Q D    HL AVKRI+KYVHGTSDFGILYSY T  
Sbjct: 70  IIGSLLYLTTSQPDIAYAIGICARYQADHRTSHLEAVKRILKYVHGTSDFGILYSYDTTS 129

Query: 61  ILVGYCDVDWAGSSDDRKSTSGGCFFLGNNLISWFSKKKLCI 103
           ILVGYCD DWAG SDDRKSTSGGCF LGNNLISWFSKK+ C+
Sbjct: 130 ILVGYCDADWAGFSDDRKSTSGGCFILGNNLISWFSKKQNCV 171

[Close]

BLAST of Cmc11g0302051.1 vs. NCBI nr
Match: TYJ96683.1 (putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 170.2 bits (430), Expect = 9.1e-39
Identity = 80/102 (78.43%), Postives = 86/102 (84.31%), Query Frame = 0


Query: 1   MIESLLYLTVSRPDIAYAIGICPRFQFDQCALHLAAVKRIIKYVHGTSDFGILYSYGTNF 60
           +I SLLYLT S+PDIAYAIGIC R+Q D    HL AVKRI+KYVHGTSDFGILYSY T  
Sbjct: 45  IIGSLLYLTTSQPDIAYAIGICARYQADHRTSHLEAVKRILKYVHGTSDFGILYSYDTTS 104

Query: 61  ILVGYCDVDWAGSSDDRKSTSGGCFFLGNNLISWFSKKKLCI 103
           ILVGYCD DWAG SDDRKSTSGGCF LGNNLISWFSKK+ C+
Sbjct: 105 ILVGYCDADWAGFSDDRKSTSGGCFILGNNLISWFSKKQNCV 146

[Close]

BLAST of Cmc11g0302051.1 vs. NCBI nr
Match: KAA0054623.1 (putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 169.5 bits (428), Expect = 1.6e-38
Identity = 79/103 (76.70%), Postives = 86/103 (83.50%), Query Frame = 0


Query: 1   MIESLLYLTVSRPDIAYAIGICPRFQFDQCALHLAAVKRIIKYVHGTSDFGILYSYGTNF 60
           MI S LYL  SRPDIAYA+ IC R+Q D C  HL AVKRIIKYVHGT+DFGILYSY T  
Sbjct: 691 MIGSHLYLKASRPDIAYAVEICARYQSDPCTSHLNAVKRIIKYVHGTTDFGILYSYDTFS 750

Query: 61  ILVGYCDVDWAGSSDDRKSTSGGCFFLGNNLISWFSKKKLCIS 104
            LVGYCD DWAGS+DDRKSTSGGCFFLGNNL+SWFSKK+ C+S
Sbjct: 751 KLVGYCDADWAGSADDRKSTSGGCFFLGNNLVSWFSKKQNCVS 793

[Close]

BLAST of Cmc11g0302051.1 vs. ExPASy Swiss-Prot
Match: P0CV72 (Secreted RxLR effector protein 161 OS=Plasmopara viticola OX=143451 GN=RXLR161 PE=2 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 3.5e-17
Identity = 40/103 (38.83%), Postives = 64/103 (62.14%), Query Frame = 0


Query: 2   IESLLYL-TVSRPDIAYAIGICPRFQFDQCALHLAAVKRIIKYVHGTSDFGILYSYGTNF 61
           + +++YL  V+RPD+A A+G+  +F  D C  H  A+KR+++Y+  T  +G+ ++     
Sbjct: 10  VGAIMYLMVVTRPDLAAAVGVLSQFASDPCPTHWQALKRVLRYLQSTQTYGLEFTRAGTA 69

Query: 62  ILVGYCDVDWAGSSDDRKSTSGGCFFLGNNLISWFSKKKLCIS 104
            LVGY D DWAG  + R+STSG  F L    +SW SKK+  ++
Sbjct: 70  KLVGYSDADWAGDVESRRSTSGYLFKLNGGCVSWRSKKQRTVA 112

[Close]

BLAST of Cmc11g0302051.1 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 1.0e-16
Identity = 43/99 (43.43%), Postives = 59/99 (59.60%), Query Frame = 0


Query: 1    MIESLLYLTVSRPDIAYAIGICPRFQFDQCALHLAAVKRIIKYVHGTSDFGILYSYGTNF 60
            ++ SL YL  +RPDI+YA+    +F       HL A+KRI++Y+ GT + GI    G   
Sbjct: 1248 IVGSLQYLAFTRPDISYAVNRLSQFMHMPTEEHLQALKRILRYLAGTPNHGIFLKKGNTL 1307

Query: 61   ILVGYCDVDWAGSSDDRKSTSGGCFFLGNNLISWFSKKK 100
             L  Y D DWAG  DD  ST+G   +LG++ ISW SKK+
Sbjct: 1308 SLHAYSDADWAGDKDDYVSTNGYIVYLGHHPISWSSKKQ 1346

[Close]

BLAST of Cmc11g0302051.1 vs. ExPASy Swiss-Prot
Match: P92519 (Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 GN=AtMg00810 PE=4 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 1.1e-15
Identity = 38/103 (36.89%), Postives = 63/103 (61.17%), Query Frame = 0


Query: 1   MIESLLYLTVSRPDIAYAIGICPRFQFDQCALHLAAVKRIIKYVHGTSDFGILYSYGTNF 60
           ++ +L YLT++RPDI+YA+ I  +   +        +KR+++YV GT   G+     +  
Sbjct: 103 IVGALQYLTLTRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKL 162

Query: 61  ILVGYCDVDWAGSSDDRKSTSGGCFFLGNNLISWFSKKKLCIS 104
            +  +CD DWAG +  R+ST+G C FLG N+ISW +K++  +S
Sbjct: 163 NVQAFCDSDWAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVS 205

[Close]

BLAST of Cmc11g0302051.1 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 1.1e-15
Identity = 40/99 (40.40%), Postives = 59/99 (59.60%), Query Frame = 0


Query: 1    MIESLLYLTVSRPDIAYAIGICPRFQFDQCALHLAAVKRIIKYVHGTSDFGILYSYGTNF 60
            ++ SL YL  +RPD++YA+    ++       H  A+KR+++Y+ GT D GI    G   
Sbjct: 1231 IVGSLQYLAFTRPDLSYAVNRLSQYMHMPTDDHWNALKRVLRYLAGTPDHGIFLKKGNTL 1290

Query: 61   ILVGYCDVDWAGSSDDRKSTSGGCFFLGNNLISWFSKKK 100
             L  Y D DWAG +DD  ST+G   +LG++ ISW SKK+
Sbjct: 1291 SLHAYSDADWAGDTDDYVSTNGYIVYLGHHPISWSSKKQ 1329

[Close]

BLAST of Cmc11g0302051.1 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 3.1e-13
Identity = 42/103 (40.78%), Postives = 63/103 (61.17%), Query Frame = 0


Query: 2    IESLLYLTV-SRPDIAYAIGICPRFQFDQCALHLAAVKRIIKYVHGTSDFGILYSYGTNF 61
            + SL+Y  V +RPDIA+A+G+  RF  +    H  AVK I++Y+ GT+   + +  G++ 
Sbjct: 1115 VGSLMYAMVCTRPDIAHAVGVVSRFLENPGKEHWEAVKWILRYLRGTTGDCLCFG-GSDP 1174

Query: 62   ILVGYCDVDWAGSSDDRKSTSGGCFFLGNNLISWFSKKKLCIS 104
            IL GY D D AG  D+RKS++G  F      ISW SK + C++
Sbjct: 1175 ILKGYTDADMAGDIDNRKSSTGYLFTFSGGAISWQSKLQKCVA 1216

[Close]

BLAST of Cmc11g0302051.1 vs. ExPASy TrEMBL
Match: A0A5D3D3G3 (Putative gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G00400 PE=4 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 1.4e-40
Identity = 81/103 (78.64%), Postives = 90/103 (87.38%), Query Frame = 0


Query: 1   MIESLLYLTVSRPDIAYAIGICPRFQFDQCALHLAAVKRIIKYVHGTSDFGILYSYGTNF 60
           +IESLL+LT SRPDIAYA+GIC R+Q D    HL AVKRI+KYVHGTSDFGILYSY T  
Sbjct: 280 IIESLLHLTASRPDIAYAVGICVRYQTDPQMSHLEAVKRILKYVHGTSDFGILYSYDTTS 339

Query: 61  ILVGYCDVDWAGSSDDRKSTSGGCFFLGNNLISWFSKKKLCIS 104
           ILVGYCD DWAGS+DDRK+TSGGCFFLGNNLISWFSKK+ C+S
Sbjct: 340 ILVGYCDADWAGSTDDRKTTSGGCFFLGNNLISWFSKKQNCVS 382

[Close]

BLAST of Cmc11g0302051.1 vs. ExPASy TrEMBL
Match: A0A5A7VKR7 (Putative gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold138G002070 PE=4 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 1.4e-40
Identity = 81/103 (78.64%), Postives = 90/103 (87.38%), Query Frame = 0


Query: 1   MIESLLYLTVSRPDIAYAIGICPRFQFDQCALHLAAVKRIIKYVHGTSDFGILYSYGTNF 60
           +IESLL+LT SRPDIAYA+GIC R+Q D    HL AVKRI+KYVHGTSDFGILYSY T  
Sbjct: 280 IIESLLHLTASRPDIAYAVGICVRYQTDPQMSHLEAVKRILKYVHGTSDFGILYSYDTTS 339

Query: 61  ILVGYCDVDWAGSSDDRKSTSGGCFFLGNNLISWFSKKKLCIS 104
           ILVGYCD DWAGS+DDRK+TSGGCFFLGNNLISWFSKK+ C+S
Sbjct: 340 ILVGYCDADWAGSTDDRKTTSGGCFFLGNNLISWFSKKQNCVS 382

[Close]

BLAST of Cmc11g0302051.1 vs. ExPASy TrEMBL
Match: A0A5D3BBJ2 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold549G00340 PE=4 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 4.4e-39
Identity = 80/102 (78.43%), Postives = 86/102 (84.31%), Query Frame = 0


Query: 1   MIESLLYLTVSRPDIAYAIGICPRFQFDQCALHLAAVKRIIKYVHGTSDFGILYSYGTNF 60
           +I SLLYLT S+PDIAYAIGIC R+Q D    HL AVKRI+KYVHGTSDFGILYSY T  
Sbjct: 45  IIGSLLYLTTSQPDIAYAIGICARYQADHRTSHLEAVKRILKYVHGTSDFGILYSYDTTS 104

Query: 61  ILVGYCDVDWAGSSDDRKSTSGGCFFLGNNLISWFSKKKLCI 103
           ILVGYCD DWAG SDDRKSTSGGCF LGNNLISWFSKK+ C+
Sbjct: 105 ILVGYCDADWAGFSDDRKSTSGGCFILGNNLISWFSKKQNCV 146

[Close]

BLAST of Cmc11g0302051.1 vs. ExPASy TrEMBL
Match: A0A5A7T284 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1480G00090 PE=4 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 4.4e-39
Identity = 80/102 (78.43%), Postives = 86/102 (84.31%), Query Frame = 0


Query: 1   MIESLLYLTVSRPDIAYAIGICPRFQFDQCALHLAAVKRIIKYVHGTSDFGILYSYGTNF 60
           +I SLLYLT S+PDIAYAIGIC R+Q D    HL AVKRI+KYVHGTSDFGILYSY T  
Sbjct: 70  IIGSLLYLTTSQPDIAYAIGICARYQADHRTSHLEAVKRILKYVHGTSDFGILYSYDTTS 129

Query: 61  ILVGYCDVDWAGSSDDRKSTSGGCFFLGNNLISWFSKKKLCI 103
           ILVGYCD DWAG SDDRKSTSGGCF LGNNLISWFSKK+ C+
Sbjct: 130 ILVGYCDADWAGFSDDRKSTSGGCFILGNNLISWFSKKQNCV 171

[Close]

BLAST of Cmc11g0302051.1 vs. ExPASy TrEMBL
Match: A0A5D3DWA8 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold22G00610 PE=4 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 7.5e-39
Identity = 79/103 (76.70%), Postives = 86/103 (83.50%), Query Frame = 0


Query: 1   MIESLLYLTVSRPDIAYAIGICPRFQFDQCALHLAAVKRIIKYVHGTSDFGILYSYGTNF 60
           MI S LYL  SRPDIAYA+ IC R+Q D C  HL AVKRIIKYVHGT+DFGILYSY T  
Sbjct: 630 MIGSHLYLKASRPDIAYAVEICARYQSDPCTSHLNAVKRIIKYVHGTTDFGILYSYDTFS 689

Query: 61  ILVGYCDVDWAGSSDDRKSTSGGCFFLGNNLISWFSKKKLCIS 104
            LVGYCD DWAGS+DDRKSTSGGCFFLGNNL+SWFSKK+ C+S
Sbjct: 690 KLVGYCDADWAGSADDRKSTSGGCFFLGNNLVSWFSKKQNCVS 732

[Close]

BLAST of Cmc11g0302051.1 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 84.0 bits (206), Expect = 8.0e-17
Identity = 38/103 (36.89%), Postives = 63/103 (61.17%), Query Frame = 0


Query: 1   MIESLLYLTVSRPDIAYAIGICPRFQFDQCALHLAAVKRIIKYVHGTSDFGILYSYGTNF 60
           ++ +L YLT++RPDI+YA+ I  +   +        +KR+++YV GT   G+     +  
Sbjct: 103 IVGALQYLTLTRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKL 162

Query: 61  ILVGYCDVDWAGSSDDRKSTSGGCFFLGNNLISWFSKKKLCIS 104
            +  +CD DWAG +  R+ST+G C FLG N+ISW +K++  +S
Sbjct: 163 NVQAFCDSDWAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVS 205

[Close]

BLAST of Cmc11g0302051.1 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 74.3 bits (181), Expect = 6.3e-14
Identity = 38/103 (36.89%), Postives = 57/103 (55.34%), Query Frame = 0


Query: 1   MIESLLYLTVSRPDIAYAIGICPRFQFDQCALHLAAVKRIIKYVHGTSDFGILYSYGTNF 60
           +I  L+YL ++R DI++A+    +F       H  AV +I+ Y+ GT   G+ YS     
Sbjct: 381 LIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEM 440

Query: 61  ILVGYCDVDWAGSSDDRKSTSGGCFFLGNNLISWFSKKKLCIS 104
            L  + D  +    D R+ST+G C FLG +LISW SKK+  +S
Sbjct: 441 QLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVS 483

[Close]

BLAST of Cmc11g0302051.1 vs. TAIR 10
Match: ATMG00240.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 61.6 bits (148), Expect = 4.3e-10
Identity = 30/88 (34.09%), Postives = 48/88 (54.55%), Query Frame = 0


Query: 6  LYLTVSRPDIAYAIGICPRFQFDQCALHLAAVKRIIKYVHGTSDFGILYSYGTNFILVGY 65
          +YLT++RPD+ +A+    +F        + AV +++ YV GT   G+ YS  ++  L  +
Sbjct: 1  MYLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAF 60

Query: 66 CDVDWAGSSDDRKSTSGGC-----FFLG 89
           D DWA   D R+S +G C     +FLG
Sbjct: 61 ADSDWASCPDTRRSVTGFCSLVPLWFLG 88

The following BLAST results are available for this feature:

BLAST of Cmc11g0302051.1 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK18114.1	2.8e-40	78.64	putative gag-pol polyprotein [Cucumis melo var. makuwa]	[more]
KAA0068014.1	2.8e-40	78.64	putative gag-pol polyprotein [Cucumis melo var. makuwa]	[more]
KAA0036888.1	9.1e-39	78.43	putative mitochondrial protein [Cucumis melo var. makuwa]	[more]
TYJ96683.1	9.1e-39	78.43	putative mitochondrial protein [Cucumis melo var. makuwa]	[more]
KAA0054623.1	1.6e-38	76.70	putative mitochondrial protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc11g0302051.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P0CV72	3.5e-17	38.83	Secreted RxLR effector protein 161 OS=Plasmopara viticola OX=143451 GN=RXLR161 P...	[more]
Q94HW2	1.0e-16	43.43	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
P92519	1.1e-15	36.89	Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9ZT94	1.1e-15	40.40	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
P10978	3.1e-13	40.78	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]

BLAST of Cmc11g0302051.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3D3G3	1.4e-40	78.64	Putative gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A5A7VKR7	1.4e-40	78.64	Putative gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sca...	[more]
A0A5D3BBJ2	4.4e-39	78.43	Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A5A7T284	4.4e-39	78.43	Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s...	[more]
A0A5D3DWA8	7.5e-39	76.70	Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]

BLAST of Cmc11g0302051.1 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00810.1	8.0e-17	36.89	DNA/RNA polymerases superfamily protein	[more]
AT4G23160.1	6.3e-14	36.89	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00240.1	4.3e-10	34.09	Gag-Pol-related retrotransposon family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR11439	GAG-POL-RELATED RETROTRANSPOSON	coord: 5..85
None	No IPR available	PANTHER	PTHR11439:SF308	SUBFAMILY NOT NAMED	coord: 5..85
None	No IPR available	CDD	cd09272	RNase_HI_RT_Ty1	coord: 63..103 e-value: 4.70285E-19 score: 74.4269

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cmc11g0302051	Cmc11g0302051	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc11g0302051.1-exon	Cmc11g0302051.1-exon-CMiso1.1chr11:22763502..22763816	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc11g0302051.1-cds	Cmc11g0302051.1-cds-CMiso1.1chr11:22763502..22763816	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cmc11g0302051.1	Cmc11g0302051.1-protein	polypeptide