Cmc11g0299241.1 (mRNA) Melon (Charmono) v1.1

Overview


Name	Cmc11g0299241.1
Type	mRNA
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Unknown protein
Location	CMiso1.1chr11: 19691854 .. 19693900 (+)
Sequence length	2047
RNA-Seq Expression	Cmc11g0299241.1
Synteny	Cmc11g0299241.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTAAAATTAAAGAGAATAACAAAAGAAGAAGAAAATAGAGAGCAAATTTGAAAACTAAATCACATTGGGGATATTTTGGGTTAGGAAAAGAACTTATTGCTTTGTGAAACAATTCAAATCGACAACACTAGTAGTAATACAGTAAATACGACAAATTACATATTCAAACACAATCATCAAATGAGGAAGAAACAAATTTTCCAAAGTACAAAAAAACAATCTATCATCATCATCATCATCATCTTCTTCTTCTTCTTCTTCTCCTTCTGCTTCATCATCATCGCTGTTCTGTTTGTTTATAGTTACTCCGGCATTTTAAAAGTTGCTATATCTTCCTGTTGAATCCATCCATATTTTTCCAAAAATGGATTCGAGATGGATTCTGGTGGGTAATGTTCAATACAATCTTCCCAAACATTACCATCTTCCAAATCTCTCACCACTTCCCATAAACAGCTATTGCATTTAAACCCAGCTCCAAAGCTTATCATCAATATTCTTTCTCCTTTCTTCAATCTCTTTTTTGCTTCCATGTATGCCAATACATACCACAAACTACTCGCCGACGTGTTCCCGAATCGGTGTAACGTCATTCTCGCCGGCTCTAAATCGTACTTCTCCAACCCCAAACTCAGCCCGATTCCGTCGATCACCGCCTTCCCGCCGGTGTGGATGCAGAAATGATCGACCCCTGTTTTGAAATTCACCGCACTCGTTTTCGGCCCGCTCCCTTGTTTTGGATTTCTGTTCAGTTTCTTCCCTAGACTCAGAATTAAAAATTGAACCAACTCCCTTGCCGGTAAAATCCTAGGCGCGATTTCTCGAAGATTGTCGACAAAAGCTCTTGTTGCGGCTTTTGGGAGGTTTTTCCCTAAGTGAAAACCCATGTAGCCTTTATCATCCTCTGTTTGAATACAACAACCGTAGGATTCATCTCTGGCCCCGTGGTGAGTTCTGATCAAGCATTTGAGTTTGAACATAGCTCTGTTTTTCAAAGCTCTGTTGTTCGTTAACAGAATCGCACACCCACCGGATCGGAACAAACAATTCGATAAAATCATCGATCTGTCGTTACCGGAATACCAATTTGGACTCAACGATTCAGACGTTATAACAAGAGCGTTGATGTTTTTATACGACTTGAATACTCTGGAAACGACGTCTATGGAAATCAAACTCGCACTGCAGCCCATTCCAGTGAGATTAAACACCTTAACATCAGACCGGAGTTTATAATAATTAATAATTCGAGCAGATAACGACGGAATCGTCGCTAACATTGAGACATTAACAACCAAAACATCGATATCCGAAGGAGAAAATCCCGATTTCTGAAAGATCTTCCCAATACTGTCATGAAAAAACTCATCCATCTCCGAGATTCCATCATCCAGCGTCGGACTATCTTCCCTGCCAGCGAACATAATCCTCGGACCGTAGGTTTCTTCACCGATACCGGAGCTAACAATAGCTTTAAGAAGGAATTTATACTCATTGAGACCCAGATTTTTGGTCCTCTTAATGACTTCGCCGCAGAACTCCGTACTTAATTTTCTGTCGTCGGTCGGCTTGTAACATTGATAATTCAATATGTAACATTCTTGATCTCGTTTGTCATCAAAATACTTCCAAATGGTGAAGAGAAAATAGAAAACAGAGCAGAGGAAGAAGAAGCAGAGAAGCTCCATAACACACACACACAAAGAGAGAGATCAAAAAAGGGGTTTTATTTTTTGAAGATGCTTCTTGAAGATATGGAGAGGAAAATGGGGATTTAAGGGAATTATGAAAGTGGGTATTGAATCTAGAAGAAGAACATGTGAAGATGGTTAATAAGTTTCCCAACGGATTGACGTCTCTGTTAATCGGAGAAGAAAGAGTTGTTCATACGAAGGGCATGTGGGAGAGTAAAAGCAGAGCCATGAAAAAGGAAAAAGAGAATAAAAATAAAACCAAAAGTATAAAATGAAACTATTGGGGATTTGTTTTTCTTTTAGAGTACTTTCATAACTTCGTATCCTCTTCATATATATAGAACAAATCTTCT

mRNA sequence

TTAAAATTAAAGAGAATAACAAAAGAAGAAGAAAATAGAGAGCAAATTTGAAAACTAAATCACATTGGGGATATTTTGGGTTAGGAAAAGAACTTATTGCTTTGTGAAACAATTCAAATCGACAACACTAGTAGTAATACAGTAAATACGACAAATTACATATTCAAACACAATCATCAAATGAGGAAGAAACAAATTTTCCAAAGTACAAAAAAACAATCTATCATCATCATCATCATCATCTTCTTCTTCTTCTTCTTCTCCTTCTGCTTCATCATCATCGCTGTTCTGTTTGTTTATAGTTACTCCGGCATTTTAAAAGTTGCTATATCTTCCTGTTGAATCCATCCATATTTTTCCAAAAATGGATTCGAGATGGATTCTGGTGGGTAATGTTCAATACAATCTTCCCAAACATTACCATCTTCCAAATCTCTCACCACTTCCCATAAACAGCTATTGCATTTAAACCCAGCTCCAAAGCTTATCATCAATATTCTTTCTCCTTTCTTCAATCTCTTTTTTGCTTCCATGTATGCCAATACATACCACAAACTACTCGCCGACGTGTTCCCGAATCGGTGTAACGTCATTCTCGCCGGCTCTAAATCGTACTTCTCCAACCCCAAACTCAGCCCGATTCCGTCGATCACCGCCTTCCCGCCGGTGTGGATGCAGAAATGATCGACCCCTGTTTTGAAATTCACCGCACTCGTTTTCGGCCCGCTCCCTTGTTTTGGATTTCTGTTCAGTTTCTTCCCTAGACTCAGAATTAAAAATTGAACCAACTCCCTTGCCGGTAAAATCCTAGGCGCGATTTCTCGAAGATTGTCGACAAAAGCTCTTGTTGCGGCTTTTGGGAGGTTTTTCCCTAAGTGAAAACCCATGTAGCCTTTATCATCCTCTGTTTGAATACAACAACCGTAGGATTCATCTCTGGCCCCGTGGTGAGTTCTGATCAAGCATTTGAGTTTGAACATAGCTCTGTTTTTCAAAGCTCTGTTGTTCGTTAACAGAATCGCACACCCACCGGATCGGAACAAACAATTCGATAAAATCATCGATCTGTCGTTACCGGAATACCAATTTGGACTCAACGATTCAGACGTTATAACAAGAGCGTTGATGTTTTTATACGACTTGAATACTCTGGAAACGACGTCTATGGAAATCAAACTCGCACTGCAGCCCATTCCAGTGAGATTAAACACCTTAACATCAGACCGGAGTTTATAATAATTAATAATTCGAGCAGATAACGACGGAATCGTCGCTAACATTGAGACATTAACAACCAAAACATCGATATCCGAAGGAGAAAATCCCGATTTCTGAAAGATCTTCCCAATACTGTCATGAAAAAACTCATCCATCTCCGAGATTCCATCATCCAGCGTCGGACTATCTTCCCTGCCAGCGAACATAATCCTCGGACCGTAGGTTTCTTCACCGATACCGGAGCTAACAATAGCTTTAAGAAGGAATTTATACTCATTGAGACCCAGATTTTTGGTCCTCTTAATGACTTCGCCGCAGAACTCCGTACTTAATTTTCTGTCGTCGGTCGGCTTGTAACATTGATAATTCAATATGTAACATTCTTGATCTCGTTTGTCATCAAAATACTTCCAAATGGTGAAGAGAAAATAGAAAACAGAGCAGAGGAAGAAGAAGCAGAGAAGCTCCATAACACACACACACAAAGAGAGAGATCAAAAAAGGGGTTTTATTTTTTGAAGATGCTTCTTGAAGATATGGAGAGGAAAATGGGGATTTAAGGGAATTATGAAAGTGGGTATTGAATCTAGAAGAAGAACATGTGAAGATGGTTAATAAGTTTCCCAACGGATTGACGTCTCTGTTAATCGGAGAAGAAAGAGTTGTTCATACGAAGGGCATGTGGGAGAGTAAAAGCAGAGCCATGAAAAAGGAAAAAGAGAATAAAAATAAAACCAAAAGTATAAAATGAAACTATTGGGGATTTGTTTTTCTTTTAGAGTACTTTCATAACTTCGTATCCTCTTCATATATATAGAACAAATCTTCT

Coding sequence (CDS)

ATGAAAAAACTCATCCATCTCCGAGATTCCATCATCCAGCGTCGGACTATCTTCCCTGCCAGCGAACATAATCCTCGGACCGTAGGTTTCTTCACCGATACCGGAGCTAACAATAGCTTTAAGAAGGAATTTATACTCATTGAGACCCAGATTTTTGGTCCTCTTAATGACTTCGCCGCAGAACTCCGTACTTAA

Protein sequence

MKKLIHLRDSIIQRRTIFPASEHNPRTVGFFTDTGANNSFKKEFILIETQIFGPLNDFAAELRT

Homology

The following BLAST results are available for this feature:

BLAST of Cmc11g0299241.1 vs.


Match Name	E-value	Identity	Description

BLAST of Cmc11g0299241.1 vs.


Match Name	E-value	Identity	Description

BLAST of Cmc11g0299241.1 vs.


Match Name	E-value	Identity	Description

BLAST of Cmc11g0299241.1 vs.


Match Name	E-value	Identity	Description

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cmc11g0299241	Cmc11g0299241	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc11g0299241.1-exon	Cmc11g0299241.1-exon-CMiso1.1chr11:19691854..19693900	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc11g0299241.1-five_prime_utr	Cmc11g0299241.1-five_prime_utr-CMiso1.1chr11:19691854..19693208	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc11g0299241.1-cds	Cmc11g0299241.1-cds-CMiso1.1chr11:19693209..19693403	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc11g0299241.1-three_prime_utr	Cmc11g0299241.1-three_prime_utr-CMiso1.1chr11:19693404..19693900	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cmc11g0299241.1	Cmc11g0299241.1-protein	polypeptide