Cmc09g0260271.1 (mRNA) Melon (Charmono) v1.1

Overview
NameCmc09g0260271.1
TypemRNA
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionUnknown protein
LocationCMiso1.1chr09: 23606433 .. 23609362 (+)
Sequence length2930
RNA-Seq ExpressionCmc09g0260271.1
SyntenyCmc09g0260271.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GCTTTTCTAAACACCATCGAGAATCAAGTTGCAACTGTTATTTCCAGCATTGGAGCCTTCTTGCTAAGACCAGTGAATAATTATATGACGGAAAACATAGACCAATTGAACTGTGTTAGTTTTGAATTGATGGAGCACTCCAAAAGACGGGGTAACTTTTGGAGGTGAATGAACAGGGTTGGTATGCTCATACACGAAGGAAAAAAAATATAGAGAGAGACAGTCAAAGGGAGTATATTGAATTTGAAAAAAAGAAACCTTTATACCGGATTTGGCAACACAGTTAAATTGAGCTATGGAGTTACATTTGCTAATAGATGCTCTAAAGTTGAATAAATTGCATTACAGTTAGGATGAGACCTATCTCCTGCAGAGAAAACGTAAGTTTTATTATTTACATCGATCCAGCTACAACCACGAATCTTTTTCACTTTTAAGCTCACCAATTGCCTCCTCACATTGATCTTCTCTACCCACTTCCCTAATTTAGCATATATATTAGACAGAATAATATAAGCAGATATTTCTTTGGGGTCCAAACTAAGCACCTTCTTAGCCACCCTCTCACCCAATTTCAAATCCATCCAAAACCAACAAGCACTCAGCAGAGCTCCCCAAATAACTCTATCAGCTTCAATTGGCATGCATCTAATAAATGCTTCAGCTTCATACAGACGTCCCGAACGACCAAGAAGATCCACCACACACGCATAGTGTTCTTGGGTTGGAATCACACCATAACATTTCTCCATTGAATGGAAAACTGTCATTCCTTCCTTCACCATACCAGCACAACTACATGCAGAAAGAATCCCCAAAAGAGTAGCTCCATTTGGCGGAACTTTTTGTTTTAACATCTCGTCAAAGACTGAGAATGCTTCAATCCCAAGTCCATGATGCACATATCCATTAATTAGAGCGGTAAAAGCTGCCACATTAGGGAAACAAACACTGGCAAACGAAGTTTGAGCATCATGGATGCTCCCACATTTTGCGTACATATCTATGAGAGATGTTCCGACATAAACATTCGAGTCAAAGGCTTCCCTGATTGCATGCACATGGAGTGCTCGACCCAATTGAATAGATTCTAAGCATGCGCATGCTTGAAACAGAACAGAGAATGTTGATCTAGAGCGTTCAACTGATGCTCTGCACATGGTTATATAGAGTTTCAACGCCCCTTCATGCTGATGATTTTGAATACAACCTGATATCATTGAGTTCCATGTCACAGGATCTCCTTCACTCTTCACTGACTCAAATAATTTGAAAGCTTTATCAATTTCACCATTCCTGGAATACACAGATATCATAGTGTTCAATGAACTGGTAGTTTTATGAGTCATTCTTTCAAATAATCTCTTTGATCCTTCAATTCTACCACTCATTGCATACCCTTTAAGCATCAAATTATATGAAGCCGGATTTTTTTCTCTTAACTTACAAAAAATTTCTTCAGCATCATTAATTCTTCCTGCTAATATTAACCCCTCTAGAAGAGAATTTGAAGCCTTTAGACACGGTCTTTCCATACTATCATAAACTGCCTTGGCACTGTCAATAGCTTCACACTGACAATAAAATAAAATCAGTGCACTACAAACAGAATGATCAAAGTGGAAGCCGTATTTAGTCAAAATCCCATGAACAACCTTCCCCCAACTCAAATCTCTCATTCTCCCACAAGCTCTTACAACAGAATCAAAAGTGAACTCATTAGGTTCAACCCCACCATTCATCCGCATGGAGCAGAATAATTCCAATCCCCTCTTACAGTTATGCTCACTTCTTGCATACCCTGATATCATAGTAGTCCATGACACCACATCCCAAGTCGGAATTTTCGTAAATAGATCAAAAGCATCATCCATTAAGTTACATTTCACATACCCTACAAGCATCAAGTCCCATAATAAATCATTCTTATCATGCAACTCATCAAAGACTTGCTTGGCTCCACTAATGTCATTGATATTTGCATACAAGTACAATAATGCACTTCCAACACGCTCAAATATCTGCAACCCAGATTTCAAAACCAAACAATGAAATTGTTTTCCCTCAGATGAACACCCTGAATGTGCACAAATACTCAACAAACTAGAAAAGGTCGTCTCATTTAATTTTACGTTGTTGCAGTGCATCCCTGAAGCCAGATTGAGAGCTTCACTATACTTTCCAAATTTGGAGTACCCAGAAATCATGATATTCCATGAGACAACACTTCTTACTGGCATTTCATTGAACAGAGTTCGAGCAAGATCAAGATGACCATTTCTTACATGACGACTTATATAAGTATTGGTAGAAATAATATTGGAGTTTTCAGTGTGTAAACCTTCACATAGAGTCGAGAATAGTTCCAAGCAAGCTTTCCACCGATTGTGCTTCCATGTTCCCAAAGATGATGACGCCCTCAACATTTCAAAATGCGGTAGAAAGAACACTTGTAATCAGAGACAAAGGAACCAATACTAAAGTAATCAAAACATGAAATTTATAGCCAGGGTCTCAATCTATAGGACTTCTAAGGCTTCTCCGTTATTGTTTCAGTTACGAGTGGATGATTGTGTGTTAATTACAAGAAAGCTGACCACTTCCACCCAGTCTGAACCCTGTGCTTCCCTATGTCAATGGCGGGCATGAAAACAAGAACTGTGGGTAGAAAAACTAAGTGGGTTTTGTAAATTTACAGAGTATAGATAAAAACGATGTGGAAGAGATTTATGCCTGGAAATCTTACTCATTTGTTGATGCACACGAAAGCTTCGGAGAGATGAAACCGGCACTGATTTTGGGTTTCGCGGGGGCGATTTAGCCGAGTAAAAGAAAGGTATGAATGGTGGTTAAGCCGACTTTGGCTACAATCAAGTGTTCGATGTGTTTGTACTGCCATAGCACTGCAGATGAAGTAAGGAGGGTTTTTC

mRNA sequence

GCTTTTCTAAACACCATCGAGAATCAAGTTGCAACTGTTATTTCCAGCATTGGAGCCTTCTTGCTAAGACCAGTGAATAATTATATGACGGAAAACATAGACCAATTGAACTGTGTTAGTTTTGAATTGATGGAGCACTCCAAAAGACGGGGTAACTTTTGGAGGTGAATGAACAGGGTTGGTATGCTCATACACGAAGGAAAAAAAATATAGAGAGAGACAGTCAAAGGGAGTATATTGAATTTGAAAAAAAGAAACCTTTATACCGGATTTGGCAACACAGTTAAATTGAGCTATGGAGTTACATTTGCTAATAGATGCTCTAAAGTTGAATAAATTGCATTACAGTTAGGATGAGACCTATCTCCTGCAGAGAAAACGTAAGTTTTATTATTTACATCGATCCAGCTACAACCACGAATCTTTTTCACTTTTAAGCTCACCAATTGCCTCCTCACATTGATCTTCTCTACCCACTTCCCTAATTTAGCATATATATTAGACAGAATAATATAAGCAGATATTTCTTTGGGGTCCAAACTAAGCACCTTCTTAGCCACCCTCTCACCCAATTTCAAATCCATCCAAAACCAACAAGCACTCAGCAGAGCTCCCCAAATAACTCTATCAGCTTCAATTGGCATGCATCTAATAAATGCTTCAGCTTCATACAGACGTCCCGAACGACCAAGAAGATCCACCACACACGCATAGTGTTCTTGGGTTGGAATCACACCATAACATTTCTCCATTGAATGGAAAACTGTCATTCCTTCCTTCACCATACCAGCACAACTACATGCAGAAAGAATCCCCAAAAGAGTAGCTCCATTTGGCGGAACTTTTTGTTTTAACATCTCGTCAAAGACTGAGAATGCTTCAATCCCAAGTCCATGATGCACATATCCATTAATTAGAGCGGTAAAAGCTGCCACATTAGGGAAACAAACACTGGCAAACGAAGTTTGAGCATCATGGATGCTCCCACATTTTGCGTACATATCTATGAGAGATGTTCCGACATAAACATTCGAGTCAAAGGCTTCCCTGATTGCATGCACATGGAGTGCTCGACCCAATTGAATAGATTCTAAGCATGCGCATGCTTGAAACAGAACAGAGAATGTTGATCTAGAGCGTTCAACTGATGCTCTGCACATGGTTATATAGAGTTTCAACGCCCCTTCATGCTGATGATTTTGAATACAACCTGATATCATTGAGTTCCATGTCACAGGATCTCCTTCACTCTTCACTGACTCAAATAATTTGAAAGCTTTATCAATTTCACCATTCCTGGAATACACAGATATCATAGTGTTCAATGAACTGGTAGTTTTATGAGTCATTCTTTCAAATAATCTCTTTGATCCTTCAATTCTACCACTCATTGCATACCCTTTAAGCATCAAATTATATGAAGCCGGATTTTTTTCTCTTAACTTACAAAAAATTTCTTCAGCATCATTAATTCTTCCTGCTAATATTAACCCCTCTAGAAGAGAATTTGAAGCCTTTAGACACGGTCTTTCCATACTATCATAAACTGCCTTGGCACTGTCAATAGCTTCACACTGACAATAAAATAAAATCAGTGCACTACAAACAGAATGATCAAAGTGGAAGCCGTATTTAGTCAAAATCCCATGAACAACCTTCCCCCAACTCAAATCTCTCATTCTCCCACAAGCTCTTACAACAGAATCAAAAGTGAACTCATTAGGTTCAACCCCACCATTCATCCGCATGGAGCAGAATAATTCCAATCCCCTCTTACAGTTATGCTCACTTCTTGCATACCCTGATATCATAGTAGTCCATGACACCACATCCCAAGTCGGAATTTTCGTAAATAGATCAAAAGCATCATCCATTAAGTTACATTTCACATACCCTACAAGCATCAAGTCCCATAATAAATCATTCTTATCATGCAACTCATCAAAGACTTGCTTGGCTCCACTAATGTCATTGATATTTGCATACAAGTACAATAATGCACTTCCAACACGCTCAAATATCTGCAACCCAGATTTCAAAACCAAACAATGAAATTGTTTTCCCTCAGATGAACACCCTGAATGTGCACAAATACTCAACAAACTAGAAAAGGTCGTCTCATTTAATTTTACGTTGTTGCAGTGCATCCCTGAAGCCAGATTGAGAGCTTCACTATACTTTCCAAATTTGGAGTACCCAGAAATCATGATATTCCATGAGACAACACTTCTTACTGGCATTTCATTGAACAGAGTTCGAGCAAGATCAAGATGACCATTTCTTACATGACGACTTATATAAGTATTGGTAGAAATAATATTGGAGTTTTCAGTGTGTAAACCTTCACATAGAGTCGAGAATAGTTCCAAGCAAGCTTTCCACCGATTGTGCTTCCATGTTCCCAAAGATGATGACGCCCTCAACATTTCAAAATGCGGTAGAAAGAACACTTGTAATCAGAGACAAAGGAACCAATACTAAAGTAATCAAAACATGAAATTTATAGCCAGGGTCTCAATCTATAGGACTTCTAAGGCTTCTCCGTTATTGTTTCAGTTACGAGTGGATGATTGTGTGTTAATTACAAGAAAGCTGACCACTTCCACCCAGTCTGAACCCTGTGCTTCCCTATGTCAATGGCGGGCATGAAAACAAGAACTGTGGGTAGAAAAACTAAGTGGGTTTTGTAAATTTACAGAGTATAGATAAAAACGATGTGGAAGAGATTTATGCCTGGAAATCTTACTCATTTGTTGATGCACACGAAAGCTTCGGAGAGATGAAACCGGCACTGATTTTGGGTTTCGCGGGGGCGATTTAGCCGAGTAAAAGAAAGGTATGAATGGTGGTTAAGCCGACTTTGGCTACAATCAAGTGTTCGATGTGTTTGTACTGCCATAGCACTGCAGATGAAGTAAGGAGGGTTTTTC

Coding sequence (CDS)

ATGGAGCAGAATAATTCCAATCCCCTCTTACAGTTATGCTCACTTCTTGCATACCCTGATATCATAGTAGTCCATGACACCACATCCCAAGTCGGAATTTTCGTAAATAGATCAAAAGCATCATCCATTAAGTTACATTTCACATACCCTACAAGCATCAAGTCCCATAATAAATCATTCTTATCATGCAACTCATCAAAGACTTGCTTGGCTCCACTAATGTCATTGATATTTGCATACAAGTACAATAATGCACTTCCAACACGCTCAAATATCTGCAACCCAGATTTCAAAACCAAACAATGA

Protein sequence

MEQNNSNPLLQLCSLLAYPDIIVVHDTTSQVGIFVNRSKASSIKLHFTYPTSIKSHNKSFLSCNSSKTCLAPLMSLIFAYKYNNALPTRSNICNPDFKTKQ
Homology
The following BLAST results are available for this feature:
BLAST of Cmc09g0260271.1 vs.
Match NameE-valueIdentityDescription
BLAST of Cmc09g0260271.1 vs.
Match NameE-valueIdentityDescription
BLAST of Cmc09g0260271.1 vs.
Match NameE-valueIdentityDescription
BLAST of Cmc09g0260271.1 vs.
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cmc09g0260271Cmc09g0260271gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cmc09g0260271.1-exonCmc09g0260271.1-exon-CMiso1.1chr09:23606433..23609362exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cmc09g0260271.1-five_prime_utrCmc09g0260271.1-five_prime_utr-CMiso1.1chr09:23606433..23608178five_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cmc09g0260271.1-cdsCmc09g0260271.1-cds-CMiso1.1chr09:23608179..23608484CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cmc09g0260271.1-three_prime_utrCmc09g0260271.1-three_prime_utr-CMiso1.1chr09:23608485..23609362three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cmc09g0260271.1Cmc09g0260271.1-proteinpolypeptide