Cmc09g0243691.1 (mRNA) Melon (Charmono) v1.1

Overview


Name	Cmc09g0243691.1
Type	mRNA
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Gag/pol protein
Location	CMiso1.1chr09: 6332100 .. 6333133 (-)
Sequence length	990
RNA-Seq Expression	Cmc09g0243691.1
Synteny	Cmc09g0243691.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGTGAAGACTACCTTTCTGAATGGCAATCTTGAGGAGACCATCTATATGCAACAACCAGAAGGATTCATAATTCCAAGTCAAGAGCAAAAGGTTTGCAAGCTTAATCGTTCTATTTATGGATTAAAACAAGCTTCTCGATCTTGGAACATAAGATTTGATACCGCAATAAAATCTTATGGATTTGATCAAATCGTTGATGAACCTTGTGTCTACAAAAGAATCATCAAGAATTTAGTAGCTTTCTTAGTTCTATACGTAGATGATATCCTACTCATTGGGAATGATGTAGGTTTACTAACTGACACTAAACAATGGCTAGCAGCCCAATTTCAAATGAAAGATTTGGGAGAGGCACAGTTTGTTTTGGGTATTCAGATTTTTAGAGATCGTAAGAACAAAATGCTAGCTTTGTCTCAAGCATCGTATATTGAAAAAATAGTTGTTAAATATTCAATGCAAAACTCCAAGAGAGACTTACTACCTTTCAGGCATGAAGTTACTTTGTCTAAGGAACAGTGTCCTAAGACACCTCAAGAGGTTGAGGAAATGAGACATATCCCCTATGCATCAGCTGTTGCCAACTTGATGTATGCGATGTTATGTACTAGACCTAACATCTGTTATGCGGTGGGGATAGTCAGTAAATATCAATCTAATCCAGGATTAGCTCATTGGATTGTCGTTAAAACTATCCTCAAGTATCTTAGGAGAATGAGGAACTACATGCTTGTGTATGGCTCTAAGGATTTGATTCTTACAGGATACACAGACTCTGACTTTCAGACTGATAGAGATTCTAGGAAATCTACATCAGGTTCAGTGTTCACTCTTAACGGAGGAGCTGTAGTTTGGAGAAGTATCAAGCAAGGATGTATTGTTGACTCCACCATGGAGGCAGAGTATGTTGCAGCTTGTGAAGCTGCCAAAGAGGCTGTTTGGCTTAGAAAATTCTTGAATGATTTGGAAGTAGTTCCAAACATGTCAAAGCCAATTACTCTTTACTGTGATAATAGTGGGGCTGTGGCTAA

mRNA sequence

ATGGATGTGAAGACTACCTTTCTGAATGGCAATCTTGAGGAGACCATCTATATGCAACAACCAGAAGGATTCATAATTCCAAGTCAAGAGCAAAAGGTTTGCAAGCTTAATCGTTCTATTTATGGATTAAAACAAGCTTCTCGATCTTGGAACATAAGATTTGATACCGCAATAAAATCTTATGGATTTGATCAAATCGTTGATGAACCTTGTGTCTACAAAAGAATCATCAAGAATTTAGTAGCTTTCTTAGTTCTATACGTAGATGATATCCTACTCATTGGGAATGATGTAGGTTTACTAACTGACACTAAACAATGGCTAGCAGCCCAATTTCAAATGAAAGATTTGGGAGAGGCACAGTTTGTTTTGGGTATTCAGATTTTTAGAGATCGTAAGAACAAAATGCTAGCTTTGTCTCAAGCATCGTATATTGAAAAAATAGTTGTTAAATATTCAATGCAAAACTCCAAGAGAGACTTACTACCTTTCAGGCATGAAGTTACTTTGTCTAAGGAACAGTGTCCTAAGACACCTCAAGAGGTTGAGGAAATGAGACATATCCCCTATGCATCAGCTGTTGCCAACTTGATGTATGCGATGTTATGTACTAGACCTAACATCTGTTATGCGGTGGGGATAGTCAGTAAATATCAATCTAATCCAGGATTAGCTCATTGGATTGTCGTTAAAACTATCCTCAAGTATCTTAGGAGAATGAGGAACTACATGCTTGTGTATGGCTCTAAGGATTTGATTCTTACAGGATACACAGACTCTGACTTTCAGACTGATAGAGATTCTAGGAAATCTACATCAGGTTCAGTGTTCACTCTTAACGGAGGAGCTGTAGTTTGGAGAAGTATCAAGCAAGGATGTATTGTTGACTCCACCATGGAGGCAGAGTATGTTGCAGCTTGTGAAGCTGCCAAAGAGGCTGTTTGGCTTAGAAAATTCTTGAATGATTTGGAAGTATGGGGCTGTGGCTAA

Coding sequence (CDS)

ATGGATGTGAAGACTACCTTTCTGAATGGCAATCTTGAGGAGACCATCTATATGCAACAACCAGAAGGATTCATAATTCCAAGTCAAGAGCAAAAGGTTTGCAAGCTTAATCGTTCTATTTATGGATTAAAACAAGCTTCTCGATCTTGGAACATAAGATTTGATACCGCAATAAAATCTTATGGATTTGATCAAATCGTTGATGAACCTTGTGTCTACAAAAGAATCATCAAGAATTTAGTAGCTTTCTTAGTTCTATACGTAGATGATATCCTACTCATTGGGAATGATGTAGGTTTACTAACTGACACTAAACAATGGCTAGCAGCCCAATTTCAAATGAAAGATTTGGGAGAGGCACAGTTTGTTTTGGGTATTCAGATTTTTAGAGATCGTAAGAACAAAATGCTAGCTTTGTCTCAAGCATCGTATATTGAAAAAATAGTTGTTAAATATTCAATGCAAAACTCCAAGAGAGACTTACTACCTTTCAGGCATGAAGTTACTTTGTCTAAGGAACAGTGTCCTAAGACACCTCAAGAGGTTGAGGAAATGAGACATATCCCCTATGCATCAGCTGTTGCCAACTTGATGTATGCGATGTTATGTACTAGACCTAACATCTGTTATGCGGTGGGGATAGTCAGTAAATATCAATCTAATCCAGGATTAGCTCATTGGATTGTCGTTAAAACTATCCTCAAGTATCTTAGGAGAATGAGGAACTACATGCTTGTGTATGGCTCTAAGGATTTGATTCTTACAGGATACACAGACTCTGACTTTCAGACTGATAGAGATTCTAGGAAATCTACATCAGGTTCAGTGTTCACTCTTAACGGAGGAGCTGTAGTTTGGAGAAGTATCAAGCAAGGATGTATTGTTGACTCCACCATGGAGGCAGAGTATGTTGCAGCTTGTGAAGCTGCCAAAGAGGCTGTTTGGCTTAGAAAATTCTTGAATGATTTGGAAGTATGGGGCTGTGGCTAA

Protein sequence

MDVKTTFLNGNLEETIYMQQPEGFIIPSQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIIKNLVAFLVLYVDDILLIGNDVGLLTDTKQWLAAQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIEKIVVKYSMQNSKRDLLPFRHEVTLSKEQCPKTPQEVEEMRHIPYASAVANLMYAMLCTRPNICYAVGIVSKYQSNPGLAHWIVVKTILKYLRRMRNYMLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIVDSTMEAEYVAACEAAKEAVWLRKFLNDLEVWGCG

Homology

[Close]

BLAST of Cmc09g0243691.1 vs. NCBI nr
Match: TYK05759.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 651.0 bits (1678), Expect = 5.6e-183
Identity = 325/325 (100.00%), Postives = 325/325 (100.00%), Query Frame = 0


Query: 1   MDVKTTFLNGNLEETIYMQQPEGFIIPSQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKS 60
           MDVKTTFLNGNLEETIYMQQPEGFIIPSQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKS
Sbjct: 66  MDVKTTFLNGNLEETIYMQQPEGFIIPSQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKS 125

Query: 61  YGFDQIVDEPCVYKRIIKNLVAFLVLYVDDILLIGNDVGLLTDTKQWLAAQFQMKDLGEA 120
           YGFDQIVDEPCVYKRIIKNLVAFLVLYVDDILLIGNDVGLLTDTKQWLAAQFQMKDLGEA
Sbjct: 126 YGFDQIVDEPCVYKRIIKNLVAFLVLYVDDILLIGNDVGLLTDTKQWLAAQFQMKDLGEA 185

Query: 121 QFVLGIQIFRDRKNKMLALSQASYIEKIVVKYSMQNSKRDLLPFRHEVTLSKEQCPKTPQ 180
           QFVLGIQIFRDRKNKMLALSQASYIEKIVVKYSMQNSKRDLLPFRHEVTLSKEQCPKTPQ
Sbjct: 186 QFVLGIQIFRDRKNKMLALSQASYIEKIVVKYSMQNSKRDLLPFRHEVTLSKEQCPKTPQ 245

Query: 181 EVEEMRHIPYASAVANLMYAMLCTRPNICYAVGIVSKYQSNPGLAHWIVVKTILKYLRRM 240
           EVEEMRHIPYASAVANLMYAMLCTRPNICYAVGIVSKYQSNPGLAHWIVVKTILKYLRRM
Sbjct: 246 EVEEMRHIPYASAVANLMYAMLCTRPNICYAVGIVSKYQSNPGLAHWIVVKTILKYLRRM 305

Query: 241 RNYMLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIVDSTME 300
           RNYMLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIVDSTME
Sbjct: 306 RNYMLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIVDSTME 365

Query: 301 AEYVAACEAAKEAVWLRKFLNDLEV 326
           AEYVAACEAAKEAVWLRKFLNDLEV
Sbjct: 366 AEYVAACEAAKEAVWLRKFLNDLEV 390

[Close]

BLAST of Cmc09g0243691.1 vs. NCBI nr
Match: KAA0061339.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 606.3 bits (1562), Expect = 1.6e-169
Identity = 300/325 (92.31%), Postives = 308/325 (94.77%), Query Frame = 0


Query: 1   MDVKTTFLNGNLEETIYMQQPEGFIIPSQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKS 60
           MDVKT FLNGNLEETIYMQQPEGFIIP QEQK+CKLNRSIYGLKQASRSWNIRFDTAIKS
Sbjct: 556 MDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKS 615

Query: 61  YGFDQIVDEPCVYKRIIKNLVAFLVLYVDDILLIGNDVGLLTDTKQWLAAQFQMKDLGEA 120
           YGFDQIVDEPCVYKRII  LVAFLVLYVDDILLIGND+GLLTD KQWLA QFQMKDLGEA
Sbjct: 616 YGFDQIVDEPCVYKRIINKLVAFLVLYVDDILLIGNDIGLLTDIKQWLATQFQMKDLGEA 675

Query: 121 QFVLGIQIFRDRKNKMLALSQASYIEKIVVKYSMQNSKRDLLPFRHEVTLSKEQCPKTPQ 180
           QFVLGIQIFRDRKNKMLALSQASYI+KIVVKYSMQNSKR LLPFRH VTLSKEQCPKTPQ
Sbjct: 676 QFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQ 735

Query: 181 EVEEMRHIPYASAVANLMYAMLCTRPNICYAVGIVSKYQSNPGLAHWIVVKTILKYLRRM 240
           +VEEMRHIPYASAV +LMYAMLCTRP+ICYAVGIVS+YQSNPGLAHW  VKTILKYLRRM
Sbjct: 736 DVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTAVKTILKYLRRM 795

Query: 241 RNYMLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIVDSTME 300
           R+Y LVYGSKDLILTGYTDSDFQTDRDSRKST GSVFTLNGGAVVWRSIKQGCI DSTME
Sbjct: 796 RDYTLVYGSKDLILTGYTDSDFQTDRDSRKSTPGSVFTLNGGAVVWRSIKQGCIADSTME 855

Query: 301 AEYVAACEAAKEAVWLRKFLNDLEV 326
           AEYV ACEAAKEAVWLR FL DLEV
Sbjct: 856 AEYVTACEAAKEAVWLRNFLIDLEV 880

[Close]

BLAST of Cmc09g0243691.1 vs. NCBI nr
Match: TYJ97618.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 605.1 bits (1559), Expect = 3.5e-169
Identity = 300/325 (92.31%), Postives = 308/325 (94.77%), Query Frame = 0


Query: 1    MDVKTTFLNGNLEETIYMQQPEGFIIPSQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKS 60
            MDVKT FLNGNLEETIYMQQPEGFIIP QEQK+CKLNRSIYGLKQASRSWNIRFDTAIKS
Sbjct: 715  MDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKS 774

Query: 61   YGFDQIVDEPCVYKRIIKNLVAFLVLYVDDILLIGNDVGLLTDTKQWLAAQFQMKDLGEA 120
            YGFDQIVDEPCVYKRII   VAFLVLYVDDILLIGND+GLLTD KQWLA QFQMKDLGEA
Sbjct: 775  YGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLTDIKQWLATQFQMKDLGEA 834

Query: 121  QFVLGIQIFRDRKNKMLALSQASYIEKIVVKYSMQNSKRDLLPFRHEVTLSKEQCPKTPQ 180
            QFVLGIQIFRDRKNKMLALSQASYI+KIVVKYSMQNSKR LLPFRH VTLSKEQCPKTPQ
Sbjct: 835  QFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQ 894

Query: 181  EVEEMRHIPYASAVANLMYAMLCTRPNICYAVGIVSKYQSNPGLAHWIVVKTILKYLRRM 240
            +VEEMRHIPYASAV +LMYAMLCTRP+ICYAVGIVS+YQSNPGLAHW  VKTILKYLRR 
Sbjct: 895  DVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTAVKTILKYLRRT 954

Query: 241  RNYMLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIVDSTME 300
            R+Y LVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCI DSTME
Sbjct: 955  RDYTLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTME 1014

Query: 301  AEYVAACEAAKEAVWLRKFLNDLEV 326
            AEYVAACEAAKEAVWLR FL DLEV
Sbjct: 1015 AEYVAACEAAKEAVWLRNFLIDLEV 1039

[Close]

BLAST of Cmc09g0243691.1 vs. NCBI nr
Match: KAA0048404.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 605.1 bits (1559), Expect = 3.5e-169
Identity = 300/325 (92.31%), Postives = 308/325 (94.77%), Query Frame = 0


Query: 1    MDVKTTFLNGNLEETIYMQQPEGFIIPSQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKS 60
            MDVKT FLNGNLEETIYMQQPEGFIIP QEQK+CKLNRSIYGLKQASRSWNIRFDTAIKS
Sbjct: 929  MDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKS 988

Query: 61   YGFDQIVDEPCVYKRIIKNLVAFLVLYVDDILLIGNDVGLLTDTKQWLAAQFQMKDLGEA 120
            YGFDQIVDEPCVYKRII   VAFLVLYVDDILLIGND+GLLTD KQWLA QFQMKDLGEA
Sbjct: 989  YGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLTDIKQWLATQFQMKDLGEA 1048

Query: 121  QFVLGIQIFRDRKNKMLALSQASYIEKIVVKYSMQNSKRDLLPFRHEVTLSKEQCPKTPQ 180
            QFVLGIQIFRDRKNKMLALSQASYI+KIVVKYSMQNSKR LLPFRH VTLSKEQCPKTPQ
Sbjct: 1049 QFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQ 1108

Query: 181  EVEEMRHIPYASAVANLMYAMLCTRPNICYAVGIVSKYQSNPGLAHWIVVKTILKYLRRM 240
            +VEEMRHIPYASAV +LMYAMLCTRP+ICYAVGIVS+YQSNPGLAHW  VKTILKYLRR 
Sbjct: 1109 DVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTAVKTILKYLRRT 1168

Query: 241  RNYMLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIVDSTME 300
            R+Y LVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCI DSTME
Sbjct: 1169 RDYTLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTME 1228

Query: 301  AEYVAACEAAKEAVWLRKFLNDLEV 326
            AEYVAACEAAKEAVWLR FL DLEV
Sbjct: 1229 AEYVAACEAAKEAVWLRNFLIDLEV 1253

[Close]

BLAST of Cmc09g0243691.1 vs. NCBI nr
Match: TYK14550.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 605.1 bits (1559), Expect = 3.5e-169
Identity = 300/325 (92.31%), Postives = 308/325 (94.77%), Query Frame = 0


Query: 1    MDVKTTFLNGNLEETIYMQQPEGFIIPSQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKS 60
            MDVKT FLNGNLEETIYMQQPEGFIIP QEQK+CKLNRSIYGLKQASRSWNIRFDTAIKS
Sbjct: 930  MDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKS 989

Query: 61   YGFDQIVDEPCVYKRIIKNLVAFLVLYVDDILLIGNDVGLLTDTKQWLAAQFQMKDLGEA 120
            YGFDQIVDEPCVYKRII   VAFLVLYVDDILLIGND+GLLTD KQWLA QFQMKDLGEA
Sbjct: 990  YGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLTDIKQWLATQFQMKDLGEA 1049

Query: 121  QFVLGIQIFRDRKNKMLALSQASYIEKIVVKYSMQNSKRDLLPFRHEVTLSKEQCPKTPQ 180
            QFVLGIQIFRDRKNKMLALSQASYI+KIVVKYSMQNSKR LLPFRH VTLSKEQCPKTPQ
Sbjct: 1050 QFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQ 1109

Query: 181  EVEEMRHIPYASAVANLMYAMLCTRPNICYAVGIVSKYQSNPGLAHWIVVKTILKYLRRM 240
            +VEEMRHIPYASAV +LMYAMLCTRP+ICYAVGIVS+YQSNPGLAHW  VKTILKYLRR 
Sbjct: 1110 DVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTAVKTILKYLRRT 1169

Query: 241  RNYMLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIVDSTME 300
            R+Y LVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCI DSTME
Sbjct: 1170 RDYTLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTME 1229

Query: 301  AEYVAACEAAKEAVWLRKFLNDLEV 326
            AEYVAACEAAKEAVWLR FL DLEV
Sbjct: 1230 AEYVAACEAAKEAVWLRNFLIDLEV 1254

[Close]

BLAST of Cmc09g0243691.1 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 330.1 bits (845), Expect = 2.9e-89
Identity = 161/324 (49.69%), Postives = 226/324 (69.75%), Query Frame = 0


Query: 1    MDVKTTFLNGNLEETIYMQQPEGFIIPSQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKS 60
            +DVKT FL+G+LEE IYM+QPEGF +  ++  VCKLN+S+YGLKQA R W ++FD+ +KS
Sbjct: 921  LDVKTAFLHGDLEEEIYMEQPEGFEVAGKKHMVCKLNKSLYGLKQAPRQWYMKFDSFMKS 980

Query: 61   YGFDQIVDEPCVY-KRIIKNLVAFLVLYVDDILLIGNDVGLLTDTKQWLAAQFQMKDLGE 120
              + +   +PCVY KR  +N    L+LYVDD+L++G D GL+   K  L+  F MKDLG 
Sbjct: 981  QTYLKTYSDPCVYFKRFSENNFIILLLYVDDMLIVGKDKGLIAKLKGDLSKSFDMKDLGP 1040

Query: 121  AQFVLGIQIFRDRKNKMLALSQASYIEKIVVKYSMQNSKRDLLPFRHEVTLSKEQCPKTP 180
            AQ +LG++I R+R ++ L LSQ  YIE+++ +++M+N+K    P    + LSK+ CP T 
Sbjct: 1041 AQQILGMKIVRERTSRKLWLSQEKYIERVLERFNMKNAKPVSTPLAGHLKLSKKMCPTTV 1100

Query: 181  QEVEEMRHIPYASAVANLMYAMLCTRPNICYAVGIVSKYQSNPGLAHWIVVKTILKYLRR 240
            +E   M  +PY+SAV +LMYAM+CTRP+I +AVG+VS++  NPG  HW  VK IL+YLR 
Sbjct: 1101 EEKGNMAKVPYSSAVGSLMYAMVCTRPDIAHAVGVVSRFLENPGKEHWEAVKWILRYLRG 1160

Query: 241  MRNYMLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIVDSTM 300
                 L +G  D IL GYTD+D   D D+RKS++G +FT +GGA+ W+S  Q C+  ST 
Sbjct: 1161 TTGDCLCFGGSDPILKGYTDADMAGDIDNRKSSTGYLFTFSGGAISWQSKLQKCVALSTT 1220

Query: 301  EAEYVAACEAAKEAVWLRKFLNDL 324
            EAEY+AA E  KE +WL++FL +L
Sbjct: 1221 EAEYIAATETGKEMIWLKRFLQEL 1244

[Close]

BLAST of Cmc09g0243691.1 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 197.2 bits (500), Expect = 2.9e-49
Identity = 120/338 (35.50%), Postives = 192/338 (56.80%), Query Frame = 0


Query: 1    MDVKTTFLNGNLEETIYMQQPEGFIIPSQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKS 60
            MDVKT FLNG L+E IYM+ P+G  I      VCKLN++IYGLKQA+R W   F+ A+K 
Sbjct: 1001 MDVKTAFLNGTLKEEIYMRLPQG--ISCNSDNVCKLNKAIYGLKQAARCWFEVFEQALKE 1060

Query: 61   YGFDQIVDEPCVY----KRIIKNLVAFLVLYVDDILLIGNDVGLLTDTKQWLAAQFQMKD 120
              F     + C+Y      I +N+  +++LYVDD+++   D+  + + K++L  +F+M D
Sbjct: 1061 CEFVNSSVDRCIYILDKGNINENI--YVLLYVDDVVIATGDMTRMNNFKRYLMEKFRMTD 1120

Query: 121  LGEAQFVLGIQIFRDRKNKMLALSQASYIEKIVVKYSMQNSKRDLLP----FRHEVTLSK 180
            L E +  +GI+I  + +   + LSQ++Y++KI+ K++M+N      P      +E+  S 
Sbjct: 1121 LNEIKHFIGIRI--EMQEDKIYLSQSAYVKKILSKFNMENCNAVSTPLPSKINYELLNSD 1180

Query: 181  EQCPKTPQEVEEMRHIPYASAVANLMYAMLCTRPNICYAVGIVSKYQSNPGLAHWIVVKT 240
            E C           + P  S +  LMY MLCTRP++  AV I+S+Y S      W  +K 
Sbjct: 1181 EDC-----------NTPCRSLIGCLMYIMLCTRPDLTTAVNILSRYSSKNNSELWQNLKR 1240

Query: 241  ILKYLRRMRNYMLVYGSKDLI----LTGYTDSDFQTDRDSRKSTSGSVFTL-NGGAVVWR 300
            +L+YL+   +  L++  K+L     + GY DSD+      RKST+G +F + +   + W 
Sbjct: 1241 VLRYLKGTIDMKLIF-KKNLAFENKIIGYVDSDWAGSEIDRKSTTGYLFKMFDFNLICWN 1300

Query: 301  SIKQGCIVDSTMEAEYVAACEAAKEAVWLRKFLNDLEV 326
            + +Q  +  S+ EAEY+A  EA +EA+WL+  L  + +
Sbjct: 1301 TKRQNSVAASSTEAEYMALFEAVREALWLKFLLTSINI 1320

[Close]

BLAST of Cmc09g0243691.1 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 3.2e-40
Identity = 102/326 (31.29%), Postives = 164/326 (50.31%), Query Frame = 0


Query: 1    MDVKTTFLNGNLEETIYMQQPEGFIIPSQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKS 60
            +DV   FL G L + +YM QP GF+   +   VC+L ++IYGLKQA R+W +   T + +
Sbjct: 1047 LDVNNAFLQGTLTDEVYMSQPPGFVDKDRPDYVCRLRKAIYGLKQAPRAWYVELRTYLLT 1106

Query: 61   YGFDQIVDEPCVYKRIIKNLVAFLVLYVDDILLIGNDVGLLTDTKQWLAAQFQMKDLGEA 120
             GF   + +  ++       + ++++YVDDIL+ GND  LL  T   L+ +F +K+  + 
Sbjct: 1107 VGFVNSISDTSLFVLQRGRSIIYMLVYVDDILITGNDTVLLKHTLDALSQRFSVKEHEDL 1166

Query: 121  QFVLGIQIFRDRKNKMLALSQASYIEKIVVKYSMQNSKRDLLPFRHEVTLSKEQCPKTPQ 180
             + LGI+    R  + L LSQ  Y   ++ + +M  +K    P      L+     K P 
Sbjct: 1167 HYFLGIE--AKRVPQGLHLSQRRYTLDLLARTNMLTAKPVATPMATSPKLTLHSGTKLPD 1226

Query: 181  EVEEMRHIPYASAVANLMYAMLCTRPNICYAVGIVSKYQSNPGLAHWIVVKTILKYLRRM 240
              E      Y   V +L Y +  TRP++ YAV  +S+Y   P   HW  +K +L+YL   
Sbjct: 1227 PTE------YRGIVGSLQY-LAFTRPDLSYAVNRLSQYMHMPTDDHWNALKRVLRYLAGT 1286

Query: 241  RNY-MLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIVDSTM 300
             ++ + +     L L  Y+D+D+  D D   ST+G +  L    + W S KQ  +V S+ 
Sbjct: 1287 PDHGIFLKKGNTLSLHAYSDADWAGDTDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSST 1346

Query: 301  EAEYVAACEAAKEAVWLRKFLNDLEV 326
            EAEY +    + E  W+   L +L +
Sbjct: 1347 EAEYRSVANTSSELQWICSLLTELGI 1363

[Close]

BLAST of Cmc09g0243691.1 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 9.3e-40
Identity = 107/326 (32.82%), Postives = 163/326 (50.00%), Query Frame = 0


Query: 1    MDVKTTFLNGNLEETIYMQQPEGFIIPSQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKS 60
            +DV   FL G L + +YM QP GFI   +   VCKL +++YGLKQA R+W +     + +
Sbjct: 1064 LDVNNAFLQGTLTDDVYMSQPPGFIDKDRPNYVCKLRKALYGLKQAPRAWYVELRNYLLT 1123

Query: 61   YGFDQIVDEPCVYKRIIKNLVAFLVLYVDDILLIGNDVGLLTDTKQWLAAQFQMKDLGEA 120
             GF   V +  ++       + ++++YVDDIL+ GND  LL +T   L+ +F +KD  E 
Sbjct: 1124 IGFVNSVSDTSLFVLQRGKSIVYMLVYVDDILITGNDPTLLHNTLDNLSQRFSVKDHEEL 1183

Query: 121  QFVLGIQIFRDRKNKMLALSQASYIEKIVVKYSMQNSKRDLLPFRHEVTLSKEQCPKTPQ 180
             + LGI+    R    L LSQ  YI  ++ + +M  +K    P      LS     K   
Sbjct: 1184 HYFLGIE--AKRVPTGLHLSQRRYILDLLARTNMITAKPVTTPMAPSPKLSLYSGTKLTD 1243

Query: 181  EVEEMRHIPYASAVANLMYAMLCTRPNICYAVGIVSKYQSNPGLAHWIVVKTILKYLRRM 240
              E      Y   V +L Y +  TRP+I YAV  +S++   P   H   +K IL+YL   
Sbjct: 1244 PTE------YRGIVGSLQY-LAFTRPDISYAVNRLSQFMHMPTEEHLQALKRILRYLAGT 1303

Query: 241  RNY-MLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIVDSTM 300
             N+ + +     L L  Y+D+D+  D+D   ST+G +  L    + W S KQ  +V S+ 
Sbjct: 1304 PNHGIFLKKGNTLSLHAYSDADWAGDKDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSST 1363

Query: 301  EAEYVAACEAAKEAVWLRKFLNDLEV 326
            EAEY +    + E  W+   L +L +
Sbjct: 1364 EAEYRSVANTSSEMQWICSLLTELGI 1380

[Close]

BLAST of Cmc09g0243691.1 vs. ExPASy Swiss-Prot
Match: P25600 (Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY5A PE=5 SV=2)

HSP 1 Score: 143.3 bits (360), Expect = 5.0e-33
Identity = 102/314 (32.48%), Postives = 147/314 (46.82%), Query Frame = 0


Query: 1   MDVKTTFLNGNLEETIYMQQPEGFIIPSQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKS 60
           MDV T FLN  ++E IY++QP GF+       V +L   +YGLKQA   WN   +  +K 
Sbjct: 1   MDVDTAFLNSTMDEPIYVKQPPGFVNERNPDYVWELYGGMYGLKQAPLLWNEHINNTLKK 60

Query: 61  YGFDQIVDEPCVYKRIIKNLVAFLVLYVDDILLIGNDVGLLTDTKQWLAAQFQMKDLGEA 120
            GF +   E  +Y R   +   ++ +YVDD+L+      +    KQ L   + MKDLG+ 
Sbjct: 61  IGFCRHEGEHGLYFRSTSDGPIYIAVYVDDLLVAAPSPKIYDRVKQELTKLYSMKDLGKV 120

Query: 121 QFVLGIQIFRDRKNKMLALSQASYIEKIVVKYSMQNSKRDLLPFRHEVTLSKEQCPKTPQ 180
              LG+ I +   N  + LS   YI K   +  +   K    P  +    SK     T  
Sbjct: 121 DKFLGLNIHQS-SNGDITLSLQDYIAKAASESEINTFKLTQTPLCN----SKPLFETTSP 180

Query: 181 EVEEMRHIPYASAVANLMYAMLCTRPNICYAVGIVSKYQSNPGLAHWIVVKTILKYLRRM 240
            ++++   PY S V  L++     RP+I Y V ++S++   P   H    + +L+YL   
Sbjct: 181 HLKDI--TPYQSIVGQLLFCANTGRPDISYPVSLLSRFLREPRAIHLESARRVLRYLYTT 240

Query: 241 RNYMLVYGS-KDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIK-QGCIVDST 300
           R+  L Y S   L LT Y D+      D   ST G V  L G  V W S K +G I   +
Sbjct: 241 RSMCLKYRSGSQLALTVYCDASHGAIHDLPHSTGGYVTLLAGAPVTWSSKKLKGVIPVPS 300

Query: 301 MEAEYVAACEAAKE 313
            EAEY+ A E   E
Sbjct: 301 TEAEYITASETVME 307

[Close]

BLAST of Cmc09g0243691.1 vs. ExPASy TrEMBL
Match: A0A5D3C5V6 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold98G002480 PE=4 SV=1)

HSP 1 Score: 651.0 bits (1678), Expect = 2.7e-183
Identity = 325/325 (100.00%), Postives = 325/325 (100.00%), Query Frame = 0


Query: 1   MDVKTTFLNGNLEETIYMQQPEGFIIPSQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKS 60
           MDVKTTFLNGNLEETIYMQQPEGFIIPSQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKS
Sbjct: 66  MDVKTTFLNGNLEETIYMQQPEGFIIPSQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKS 125

Query: 61  YGFDQIVDEPCVYKRIIKNLVAFLVLYVDDILLIGNDVGLLTDTKQWLAAQFQMKDLGEA 120
           YGFDQIVDEPCVYKRIIKNLVAFLVLYVDDILLIGNDVGLLTDTKQWLAAQFQMKDLGEA
Sbjct: 126 YGFDQIVDEPCVYKRIIKNLVAFLVLYVDDILLIGNDVGLLTDTKQWLAAQFQMKDLGEA 185

Query: 121 QFVLGIQIFRDRKNKMLALSQASYIEKIVVKYSMQNSKRDLLPFRHEVTLSKEQCPKTPQ 180
           QFVLGIQIFRDRKNKMLALSQASYIEKIVVKYSMQNSKRDLLPFRHEVTLSKEQCPKTPQ
Sbjct: 186 QFVLGIQIFRDRKNKMLALSQASYIEKIVVKYSMQNSKRDLLPFRHEVTLSKEQCPKTPQ 245

Query: 181 EVEEMRHIPYASAVANLMYAMLCTRPNICYAVGIVSKYQSNPGLAHWIVVKTILKYLRRM 240
           EVEEMRHIPYASAVANLMYAMLCTRPNICYAVGIVSKYQSNPGLAHWIVVKTILKYLRRM
Sbjct: 246 EVEEMRHIPYASAVANLMYAMLCTRPNICYAVGIVSKYQSNPGLAHWIVVKTILKYLRRM 305

Query: 241 RNYMLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIVDSTME 300
           RNYMLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIVDSTME
Sbjct: 306 RNYMLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIVDSTME 365

Query: 301 AEYVAACEAAKEAVWLRKFLNDLEV 326
           AEYVAACEAAKEAVWLRKFLNDLEV
Sbjct: 366 AEYVAACEAAKEAVWLRKFLNDLEV 390

[Close]

BLAST of Cmc09g0243691.1 vs. ExPASy TrEMBL
Match: A0A5A7V6N0 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold749G00160 PE=4 SV=1)

HSP 1 Score: 606.3 bits (1562), Expect = 7.6e-170
Identity = 300/325 (92.31%), Postives = 308/325 (94.77%), Query Frame = 0


Query: 1   MDVKTTFLNGNLEETIYMQQPEGFIIPSQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKS 60
           MDVKT FLNGNLEETIYMQQPEGFIIP QEQK+CKLNRSIYGLKQASRSWNIRFDTAIKS
Sbjct: 556 MDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKS 615

Query: 61  YGFDQIVDEPCVYKRIIKNLVAFLVLYVDDILLIGNDVGLLTDTKQWLAAQFQMKDLGEA 120
           YGFDQIVDEPCVYKRII  LVAFLVLYVDDILLIGND+GLLTD KQWLA QFQMKDLGEA
Sbjct: 616 YGFDQIVDEPCVYKRIINKLVAFLVLYVDDILLIGNDIGLLTDIKQWLATQFQMKDLGEA 675

Query: 121 QFVLGIQIFRDRKNKMLALSQASYIEKIVVKYSMQNSKRDLLPFRHEVTLSKEQCPKTPQ 180
           QFVLGIQIFRDRKNKMLALSQASYI+KIVVKYSMQNSKR LLPFRH VTLSKEQCPKTPQ
Sbjct: 676 QFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQ 735

Query: 181 EVEEMRHIPYASAVANLMYAMLCTRPNICYAVGIVSKYQSNPGLAHWIVVKTILKYLRRM 240
           +VEEMRHIPYASAV +LMYAMLCTRP+ICYAVGIVS+YQSNPGLAHW  VKTILKYLRRM
Sbjct: 736 DVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTAVKTILKYLRRM 795

Query: 241 RNYMLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIVDSTME 300
           R+Y LVYGSKDLILTGYTDSDFQTDRDSRKST GSVFTLNGGAVVWRSIKQGCI DSTME
Sbjct: 796 RDYTLVYGSKDLILTGYTDSDFQTDRDSRKSTPGSVFTLNGGAVVWRSIKQGCIADSTME 855

Query: 301 AEYVAACEAAKEAVWLRKFLNDLEV 326
           AEYV ACEAAKEAVWLR FL DLEV
Sbjct: 856 AEYVTACEAAKEAVWLRNFLIDLEV 880

[Close]

BLAST of Cmc09g0243691.1 vs. ExPASy TrEMBL
Match: A0A5A7SMH8 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G002560 PE=4 SV=1)

HSP 1 Score: 605.1 bits (1559), Expect = 1.7e-169
Identity = 300/325 (92.31%), Postives = 308/325 (94.77%), Query Frame = 0


Query: 1    MDVKTTFLNGNLEETIYMQQPEGFIIPSQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKS 60
            MDVKT FLNGNLEETIYMQQPEGFIIP QEQK+CKLNRSIYGLKQASRSWNIRFDTAIKS
Sbjct: 930  MDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKS 989

Query: 61   YGFDQIVDEPCVYKRIIKNLVAFLVLYVDDILLIGNDVGLLTDTKQWLAAQFQMKDLGEA 120
            YGFDQIVDEPCVYKRII   VAFLVLYVDDILLIGND+GLLTD KQWLA QFQMKDLGEA
Sbjct: 990  YGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLTDIKQWLATQFQMKDLGEA 1049

Query: 121  QFVLGIQIFRDRKNKMLALSQASYIEKIVVKYSMQNSKRDLLPFRHEVTLSKEQCPKTPQ 180
            QFVLGIQIFRDRKNKMLALSQASYI+KIVVKYSMQNSKR LLPFRH VTLSKEQCPKTPQ
Sbjct: 1050 QFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQ 1109

Query: 181  EVEEMRHIPYASAVANLMYAMLCTRPNICYAVGIVSKYQSNPGLAHWIVVKTILKYLRRM 240
            +VEEMRHIPYASAV +LMYAMLCTRP+ICYAVGIVS+YQSNPGLAHW  VKTILKYLRR 
Sbjct: 1110 DVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTAVKTILKYLRRT 1169

Query: 241  RNYMLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIVDSTME 300
            R+Y LVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCI DSTME
Sbjct: 1170 RDYTLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTME 1229

Query: 301  AEYVAACEAAKEAVWLRKFLNDLEV 326
            AEYVAACEAAKEAVWLR FL DLEV
Sbjct: 1230 AEYVAACEAAKEAVWLRNFLIDLEV 1254

[Close]

BLAST of Cmc09g0243691.1 vs. ExPASy TrEMBL
Match: A0A5D3CPJ6 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold119G00040 PE=4 SV=1)

HSP 1 Score: 605.1 bits (1559), Expect = 1.7e-169
Identity = 300/325 (92.31%), Postives = 308/325 (94.77%), Query Frame = 0


Query: 1    MDVKTTFLNGNLEETIYMQQPEGFIIPSQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKS 60
            MDVKT FLNGNLEETIYMQQPEGFIIP QEQK+CKLNRSIYGLKQASRSWNIRFDTAIKS
Sbjct: 930  MDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKS 989

Query: 61   YGFDQIVDEPCVYKRIIKNLVAFLVLYVDDILLIGNDVGLLTDTKQWLAAQFQMKDLGEA 120
            YGFDQIVDEPCVYKRII   VAFLVLYVDDILLIGND+GLLTD KQWLA QFQMKDLGEA
Sbjct: 990  YGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLTDIKQWLATQFQMKDLGEA 1049

Query: 121  QFVLGIQIFRDRKNKMLALSQASYIEKIVVKYSMQNSKRDLLPFRHEVTLSKEQCPKTPQ 180
            QFVLGIQIFRDRKNKMLALSQASYI+KIVVKYSMQNSKR LLPFRH VTLSKEQCPKTPQ
Sbjct: 1050 QFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQ 1109

Query: 181  EVEEMRHIPYASAVANLMYAMLCTRPNICYAVGIVSKYQSNPGLAHWIVVKTILKYLRRM 240
            +VEEMRHIPYASAV +LMYAMLCTRP+ICYAVGIVS+YQSNPGLAHW  VKTILKYLRR 
Sbjct: 1110 DVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTAVKTILKYLRRT 1169

Query: 241  RNYMLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIVDSTME 300
            R+Y LVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCI DSTME
Sbjct: 1170 RDYTLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTME 1229

Query: 301  AEYVAACEAAKEAVWLRKFLNDLEV 326
            AEYVAACEAAKEAVWLR FL DLEV
Sbjct: 1230 AEYVAACEAAKEAVWLRNFLIDLEV 1254

[Close]

BLAST of Cmc09g0243691.1 vs. ExPASy TrEMBL
Match: A0A5A7TWB9 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold133G00310 PE=4 SV=1)

HSP 1 Score: 605.1 bits (1559), Expect = 1.7e-169
Identity = 300/325 (92.31%), Postives = 308/325 (94.77%), Query Frame = 0


Query: 1    MDVKTTFLNGNLEETIYMQQPEGFIIPSQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKS 60
            MDVKT FLNGNLEETIYMQQPEGFIIP QEQK+CKLNRSIYGLKQASRSWNIRFDTAIKS
Sbjct: 930  MDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKS 989

Query: 61   YGFDQIVDEPCVYKRIIKNLVAFLVLYVDDILLIGNDVGLLTDTKQWLAAQFQMKDLGEA 120
            YGFDQIVDEPCVYKRII   VAFLVLYVDDILLIGND+GLLTD KQWLA QFQMKDLGEA
Sbjct: 990  YGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLTDIKQWLATQFQMKDLGEA 1049

Query: 121  QFVLGIQIFRDRKNKMLALSQASYIEKIVVKYSMQNSKRDLLPFRHEVTLSKEQCPKTPQ 180
            QFVLGIQIFRDRKNKMLALSQASYI+KIVVKYSMQNSKR LLPFRH VTLSKEQCPKTPQ
Sbjct: 1050 QFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQ 1109

Query: 181  EVEEMRHIPYASAVANLMYAMLCTRPNICYAVGIVSKYQSNPGLAHWIVVKTILKYLRRM 240
            +VEEMRHIPYASAV +LMYAMLCTRP+ICYAVGIVS+YQSNPGLAHW  VKTILKYLRR 
Sbjct: 1110 DVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTAVKTILKYLRRT 1169

Query: 241  RNYMLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIVDSTME 300
            R+YMLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVF LNGGAVVWRSIKQGCI DSTME
Sbjct: 1170 RDYMLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFILNGGAVVWRSIKQGCIADSTME 1229

Query: 301  AEYVAACEAAKEAVWLRKFLNDLEV 326
            AEYVAACEAAKEAVWLR FL DLEV
Sbjct: 1230 AEYVAACEAAKEAVWLRNFLIDLEV 1254

[Close]

BLAST of Cmc09g0243691.1 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 164.1 bits (414), Expect = 1.9e-40
Identity = 102/330 (30.91%), Postives = 171/330 (51.82%), Query Frame = 0


Query: 1   MDVKTTFLNGNLEETIYMQQPEGFIIPSQE----QKVCKLNRSIYGLKQASRSWNIRFDT 60
           +D+   FLNG+L+E IYM+ P G+     +      VC L +SIYGLKQASR W ++F  
Sbjct: 193 LDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSV 252

Query: 61  AIKSYGFDQIVDEPCVYKRIIKNLVAFLVLYVDDILLIGNDVGLLTDTKQWLAAQFQMKD 120
            +  +GF Q   +   + +I   L   +++YVDDI++  N+   + + K  L + F+++D
Sbjct: 253 TLIGFGFVQSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRD 312

Query: 121 LGEAQFVLGIQIFRDRKNKMLALSQASYIEKIVVKYSMQNSKRDLLPFRHEVTLSKEQCP 180
           LG  ++ LG++I R      + + Q  Y   ++ +  +   K   +P    VT S     
Sbjct: 313 LGPLKYFLGLEIARSAAG--INICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAH--- 372

Query: 181 KTPQEVEEMRHIPYASAVANLMYAMLCTRPNICYAVGIVSKYQSNPGLAHWIVVKTILKY 240
                 + +    Y   +  LMY  + TR +I +AV  +S++   P LAH   V  IL Y
Sbjct: 373 ---SGGDFVDAKAYRRLIGRLMYLQI-TRLDISFAVNKLSQFSEAPRLAHQQAVMKILHY 432

Query: 241 LRRMRNYMLVYGSK-DLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIV 300
           ++      L Y S+ ++ L  ++D+ FQ+ +D+R+ST+G    L    + W+S KQ  + 
Sbjct: 433 IKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVS 492

Query: 301 DSTMEAEYVAACEAAKEAVWLRKFLNDLEV 326
            S+ EAEY A   A  E +WL +F  +L++
Sbjct: 493 KSSAEAEYRALSFATDEMMWLAQFFRELQL 513

[Close]

BLAST of Cmc09g0243691.1 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 95.9 bits (237), Expect = 6.4e-20
Identity = 77/236 (32.63%), Postives = 118/236 (50.00%), Query Frame = 0


Query: 83  FLVLYVDDILLIGNDVGLLTDTKQWLAAQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQA 142
           +L+LYVDDILL G+   LL      L++ F MKDLG   + LGIQI        L LSQ 
Sbjct: 2   YLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSG--LFLSQT 61

Query: 143 SYIEKIVVKYSMQNSK--RDLLPFRHEVTLSKEQCPKTPQEVEEMRHIPYASAVANLMYA 202
            Y E+I+    M + K     LP +   ++S  + P  P +        + S V  L Y 
Sbjct: 62  KYAEQILNNAGMLDCKPMSTPLPLKLNSSVSTAKYP-DPSD--------FRSIVGALQYL 121

Query: 203 MLCTRPNICYAVGIVSKYQSNPGLAHWIVVKTILKYLR-RMRNYMLVYGSKDLILTGYTD 262
            L TRP+I YAV IV +    P LA + ++K +L+Y++  + + + ++ +  L +  + D
Sbjct: 122 TL-TRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCD 181

Query: 263 SDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIVDSTMEAEYVAACEAAKEAVW 316
           SD+     +R+ST+G    L    + W + +Q  +  S+ E EY A    A E  W
Sbjct: 182 SDWAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225

The following BLAST results are available for this feature:

BLAST of Cmc09g0243691.1 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK05759.1	5.6e-183	100.00	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0061339.1	1.6e-169	92.31	gag/pol protein [Cucumis melo var. makuwa]	[more]
TYJ97618.1	3.5e-169	92.31	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0048404.1	3.5e-169	92.31	gag/pol protein [Cucumis melo var. makuwa]	[more]
TYK14550.1	3.5e-169	92.31	gag/pol protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc09g0243691.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P10978	2.9e-89	49.69	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P04146	2.9e-49	35.50	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
Q9ZT94	3.2e-40	31.29	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
Q94HW2	9.3e-40	32.82	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
P25600	5.0e-33	32.48	Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain AT...	[more]

BLAST of Cmc09g0243691.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3C5V6	2.7e-183	100.00	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold98G00248...	[more]
A0A5A7V6N0	7.6e-170	92.31	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold749G0016...	[more]
A0A5A7SMH8	1.7e-169	92.31	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G0025...	[more]
A0A5D3CPJ6	1.7e-169	92.31	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold119G0004...	[more]
A0A5A7TWB9	1.7e-169	92.31	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold133G0031...	[more]

BLAST of Cmc09g0243691.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	1.9e-40	30.91	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00810.1	6.4e-20	32.63	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013103	Reverse transcriptase, RNA-dependent DNA polymerase	PFAM	PF07727	RVT_2	coord: 1..163 e-value: 2.4E-43 score: 148.5
None	No IPR available	PANTHER	PTHR45895	FAMILY NOT NAMED	coord: 1..245
None	No IPR available	CDD	cd09272	RNase_HI_RT_Ty1	coord: 255..325 e-value: 4.74279E-34 score: 119.88
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 1..144

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cmc09g0243691	Cmc09g0243691	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc09g0243691.1-exon	Cmc09g0243691.1-exon-CMiso1.1chr09:6332100..6332114	exon
Cmc09g0243691.1-exon	Cmc09g0243691.1-exon-CMiso1.1chr09:6332159..6333133	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc09g0243691.1-cds	Cmc09g0243691.1-cds-CMiso1.1chr09:6332100..6332114	CDS
Cmc09g0243691.1-cds	Cmc09g0243691.1-cds-CMiso1.1chr09:6332159..6333133	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cmc09g0243691.1	Cmc09g0243691.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006508	proteolysis
molecular_function	GO:0008234	cysteine-type peptidase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding