Cmc09g0243121.1 (mRNA) Melon (Charmono) v1.1

Overview


Name	Cmc09g0243121.1
Type	mRNA
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Location	CMiso1.1chr09: 5560719 .. 5562446 (+)
Sequence length	1659
RNA-Seq Expression	Cmc09g0243121.1
Synteny	Cmc09g0243121.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTAGACGTGACCCTACTAGTGTTAGACATGCAGGATTTTGACGTGATTCTAGGCATGGATTGGCTGTCAGCCAACCATGCAAATATAGATTGTTTTGGCAAGGAAGTTGTCTTTAACCCTCGCTCTGGGGCTAGTTTCAAATTTAGGGGGGCAGGCATGGTATGTATACCCAAGGTCATCTCAGCCATGAAGGCTAGTAAACTACTCAGCCATGGTACTTGGGGCATCTTGGCAAGCGTAGTGGATATTAGAGAGCCAGAAGTTTCCCTATCTTCCGAACCAGTAGTAAGGGAGTACCCTGACGTTTTCCCCGACGAACTCCCAGGACTTCCGCCTCCTAGGGAGGTAGACTTCGCCATCGAGTTAGAGCCGGGCACTGCCCCTATCTCGAGGGCCCCTTACAGAATGGCTCCAGCCGAGCTAAAAGAGTTGAAGGTCCAGTTACAGGAGTTGCTGGACAAAGGCTTCATCCGGCCCAGTGAGTCACCTTGGGGAGCCCCAGTGTTGTTCGTGAAGAAGAAGGATGGGTCGATGCGCCTTTGTATTGACTACCGAGAGCTAAACAAGGTGACAGTTAAAAATCGCTACCCCTTGCTTAGGATTGATGACTTGTTCGATCAGTTGCAGGGAGCCACTTTCTTTTCCAAGATCGACCGGCGGTCAGGCTATCACCAGTTGAGGATTAGGGACGGTGACATTCCCAAGACGGCCTTTCGTTTGAGGTACGGACATTACGAGTTCGTTGTGATGTCTTTCGGCTTGACTAACGCTCCTGCAGTGTTCATGGATTTGATGAACAGGGTGTTTAACGATTTTCTAGACTCGTTCGTCATAGTCTTTATTGATGACATCTTGATTTACTCTAAAACTGAGGCTGAGCACGAGGAGCACTTGCACCAGGTTTTGAAGACTCTTCGAGCCAACAAGTTGTATGCCAAGTTCTCCAAGTGTGAATTCTAGTTAAGGAAGGTGACGTTCCTTGGCCACGTGGTTTCCAGTGAGGGAGTTTCAGTGGATCCAGCAAAGATTGAAGCGGTGACCAACTGGCCTCGACCATCCACAGTTAGTGAAATTCAAAGTTTTCTGGGCTTGGCAGGTTACTACAGGAGGTTCGTGGAAGACTCCTCACGTATAGCCAGCCCGTTGACCCAGTTGACCAGGAAGGGAACCCCTTTTGTCTGGAGCCCAGCATGCGAGAGTAGCTTTCAGGAGCTCAAGCAGAAGCTGGTGACTGCACCAGTCCTGACAGTGCCCGATGGGTCGGTAAACTTTGTGATCTATAGTGATGCCTCCAAGAAGGGACTGGGCAGTGTCCTGATGCAGCAAGGTAAGGTAGTTGCTTATGCCTCCCGCCAGTTGAAGATTCATGAGCAGAACTACCCTACCCACGACTTGGAGTTGGCAGCTGTAGTCTTTGCACTGAAGATATGGAGGCACTACCTGTACGGTGAGAAGATACAGATTTACACCGACCATAAGAGCCTGAAGTACTTCTTCACTCAGAAGGAGTTGAACATGAGGCAGAGGAGGTGGCTCGAGTTGGTGAAAGACAATGACTGCGAGATCCTGTACCACCCTGGTAAAGCAAATGTAGTGGCTGACGCGCTGAGTAGGAAGGTTGCACATTCAGCAACGCTAATCACCAAGCAGACCCCCTTACTCAGAGATTTTGAGAGAGCCGAGATTGCAGTCTCAGTAGGTGAGGTTACCGCACAGTTGGCTTAG

mRNA sequence

ATGTTAGACGTGACCCTACTAGTGTTAGACATGCAGGATTTTGACGTGATTCTAGGCATGGATTGGCTGTCAGCCAACCATGCAAATATAGATTGTTTTGGCAAGGAAGTTGTCTTTAACCCTCGCTCTGGGGCTAGTTTCAAATTTAGGGGGGCAGGCATGGTATGTATACCCAAGGTCATCTCAGCCATGAAGGCTAGTAAACTACTCAGCCATGGTACTTGGGGCATCTTGGCAAGCGTAGTGGATATTAGAGAGCCAGAAGTTTCCCTATCTTCCGAACCAGTAGTAAGGGAGTACCCTGACGTTTTCCCCGACGAACTCCCAGGACTTCCGCCTCCTAGGGAGGTAGACTTCGCCATCGAGTTAGAGCCGGGCACTGCCCCTATCTCGAGGGCCCCTTACAGAATGGCTCCAGCCGAGCTAAAAGAGTTGAAGGTCCAGTTACAGGAGTTGCTGGACAAAGGCTTCATCCGGCCCAGTGAGTCACCTTGGGGAGCCCCAGTGTTGTTCGTGAAGAAGAAGGATGGGTCGATGCGCCTTTGTATTGACTACCGAGAGCTAAACAAGGTGACAGTTAAAAATCGCTACCCCTTGCTTAGGATTGATGACTTGTTCGATCAGTTGCAGGGAGCCACTTTCTTTTCCAAGATCGACCGGCGGTCAGGCTATCACCAGTTGAGGATTAGGGACGGTGACATTCCCAAGACGGCCTTTCGTTTGAGGTACGGACATTACGAGTTCGTTGTGATGTCTTTCGGCTTGACTAACGCTCCTGCAGTGTTCATGGATTTGATGAACAGGGTGTTTAACGATTTTCTAGACTCGTTCGTCATAGTCTTTATTGATGACATCTTGATTTACTCTAAAACTGAGGCTGAGCACGAGGAGCACTTGCACCAGGTTTTGAAGACTCTTCGAGCCAACAAGTTTGAGGGAGTTTCAGTGGATCCAGCAAAGATTGAAGCGGTGACCAACTGGCCTCGACCATCCACAGTTAGTGAAATTCAAAGTTTTCTGGGCTTGGCAGGTTACTACAGGAGGTTCGTGGAAGACTCCTCACGTATAGCCAGCCCGTTGACCCAGTTGACCAGGAAGGGAACCCCTTTTGTCTGGAGCCCAGCATGCGAGAGTAGCTTTCAGGAGCTCAAGCAGAAGCTGGTGACTGCACCAGTCCTGACAGTGCCCGATGGGTCGGTAAACTTTGTGATCTATAGTGATGCCTCCAAGAAGGGACTGGGCAGTGTCCTGATGCAGCAAGGTAAGGTAGTTGCTTATGCCTCCCGCCAGTTGAAGATTCATGAGCAGAACTACCCTACCCACGACTTGGAGTTGGCAGCTGTAGTCTTTGCACTGAAGATATGGAGGCACTACCTGTACGGTGAGAAGATACAGATTTACACCGACCATAAGAGCCTGAAGTACTTCTTCACTCAGAAGGAGTTGAACATGAGGCAGAGGAGGTGGCTCGAGTTGGTGAAAGACAATGACTGCGAGATCCTGTACCACCCTGGTAAAGCAAATGTAGTGGCTGACGCGCTGAGTAGGAAGGTTGCACATTCAGCAACGCTAATCACCAAGCAGACCCCCTTACTCAGAGATTTTGAGAGAGCCGAGATTGCAGTCTCAGTAGGTGAGGTTACCGCACAGTTGGCTTAG

Coding sequence (CDS)

ATGTTAGACGTGACCCTACTAGTGTTAGACATGCAGGATTTTGACGTGATTCTAGGCATGGATTGGCTGTCAGCCAACCATGCAAATATAGATTGTTTTGGCAAGGAAGTTGTCTTTAACCCTCGCTCTGGGGCTAGTTTCAAATTTAGGGGGGCAGGCATGGTATGTATACCCAAGGTCATCTCAGCCATGAAGGCTAGTAAACTACTCAGCCATGGTACTTGGGGCATCTTGGCAAGCGTAGTGGATATTAGAGAGCCAGAAGTTTCCCTATCTTCCGAACCAGTAGTAAGGGAGTACCCTGACGTTTTCCCCGACGAACTCCCAGGACTTCCGCCTCCTAGGGAGGTAGACTTCGCCATCGAGTTAGAGCCGGGCACTGCCCCTATCTCGAGGGCCCCTTACAGAATGGCTCCAGCCGAGCTAAAAGAGTTGAAGGTCCAGTTACAGGAGTTGCTGGACAAAGGCTTCATCCGGCCCAGTGAGTCACCTTGGGGAGCCCCAGTGTTGTTCGTGAAGAAGAAGGATGGGTCGATGCGCCTTTGTATTGACTACCGAGAGCTAAACAAGGTGACAGTTAAAAATCGCTACCCCTTGCTTAGGATTGATGACTTGTTCGATCAGTTGCAGGGAGCCACTTTCTTTTCCAAGATCGACCGGCGGTCAGGCTATCACCAGTTGAGGATTAGGGACGGTGACATTCCCAAGACGGCCTTTCGTTTGAGGTACGGACATTACGAGTTCGTTGTGATGTCTTTCGGCTTGACTAACGCTCCTGCAGTGTTCATGGATTTGATGAACAGGGTGTTTAACGATTTTCTAGACTCGTTCGTCATAGTCTTTATTGATGACATCTTGATTTACTCTAAAACTGAGGCTGAGCACGAGGAGCACTTGCACCAGGTTTTGAAGACTCTTCGAGCCAACAAGTTTGAGGGAGTTTCAGTGGATCCAGCAAAGATTGAAGCGGTGACCAACTGGCCTCGACCATCCACAGTTAGTGAAATTCAAAGTTTTCTGGGCTTGGCAGGTTACTACAGGAGGTTCGTGGAAGACTCCTCACGTATAGCCAGCCCGTTGACCCAGTTGACCAGGAAGGGAACCCCTTTTGTCTGGAGCCCAGCATGCGAGAGTAGCTTTCAGGAGCTCAAGCAGAAGCTGGTGACTGCACCAGTCCTGACAGTGCCCGATGGGTCGGTAAACTTTGTGATCTATAGTGATGCCTCCAAGAAGGGACTGGGCAGTGTCCTGATGCAGCAAGGTAAGGTAGTTGCTTATGCCTCCCGCCAGTTGAAGATTCATGAGCAGAACTACCCTACCCACGACTTGGAGTTGGCAGCTGTAGTCTTTGCACTGAAGATATGGAGGCACTACCTGTACGGTGAGAAGATACAGATTTACACCGACCATAAGAGCCTGAAGTACTTCTTCACTCAGAAGGAGTTGAACATGAGGCAGAGGAGGTGGCTCGAGTTGGTGAAAGACAATGACTGCGAGATCCTGTACCACCCTGGTAAAGCAAATGTAGTGGCTGACGCGCTGAGTAGGAAGGTTGCACATTCAGCAACGCTAATCACCAAGCAGACCCCCTTACTCAGAGATTTTGAGAGAGCCGAGATTGCAGTCTCAGTAGGTGAGGTTACCGCACAGTTGGCTTAG

Protein sequence

MLDVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEVVFNPRSGASFKFRGAGMVCIPKVISAMKASKLLSHGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSESPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLLRIDDLFDQLQGATFFSKIDRRSGYHQLRIRDGDIPKTAFRLRYGHYEFVVMSFGLTNAPAVFMDLMNRVFNDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLKTLRANKFEGVSVDPAKIEAVTNWPRPSTVSEIQSFLGLAGYYRRFVEDSSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSVNFVIYSDASKKGLGSVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDNDCEILYHPGKANVVADALSRKVAHSATLITKQTPLLRDFERAEIAVSVGEVTAQLA

Homology

[Close]

BLAST of Cmc09g0243121.1 vs. NCBI nr
Match: KAA0060745.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1048.1 bits (2709), Expect = 2.6e-302
Identity = 534/575 (92.87%), Postives = 537/575 (93.39%), Query Frame = 0


Query: 1    MLDVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEVVFNPRSGASFKFRGAGMVCIPKV 60
            MLDVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEVVFNP SGASFKFRGAGMVCIPKV
Sbjct: 435  MLDVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEVVFNPPSGASFKFRGAGMVCIPKV 494

Query: 61   ISAMKASKLLSHGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFA 120
            ISAMKASKLLS GTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFA
Sbjct: 495  ISAMKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFA 554

Query: 121  IELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSESPWGAPVLFVKKKDGSMR 180
            IELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPS SPWGAPVLFVKKKDGSMR
Sbjct: 555  IELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR 614

Query: 181  LCIDYRELNKVTVKNRYPLLRIDDLFDQLQGATFFSKIDRRSGYHQLRIRDGDIPKTAFR 240
            LCIDYRELNKVTVKNRYPL +IDDLFDQLQGAT FSKID RSGYHQLRIRDGDIPKTAFR
Sbjct: 615  LCIDYRELNKVTVKNRYPLPKIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFR 674

Query: 241  LRYGHYEFVVMSFGLTNAPAVFMDLMNRVFNDFLDSFVIVFIDDILIYSKTEAEHEEHLH 300
             RYGHYEFVVMSFGLTNAPAVFMDLMNRVF DFLDSFVIVFIDDILIYSKTEAEHEEHLH
Sbjct: 675  SRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLH 734

Query: 301  QVLKTLRANKF-----------------------EGVSVDPAKIEAVTNWPRPSTVSEIQ 360
            QVL+TLRANK                        EGVSVDPAKIEAVTNWPRPSTVSEI+
Sbjct: 735  QVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIR 794

Query: 361  SFLGLAGYYRRFVEDSSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPD 420
            SFLGLAGYYRRFVED SRIASPLTQLTRKGTPFVWSPACESSFQELKQKLV APVLTVPD
Sbjct: 795  SFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVIAPVLTVPD 854

Query: 421  GSVNFVIYSDASKKGLGSVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRH 480
            GS NFVIYSDASKKGLG VLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRH
Sbjct: 855  GSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRH 914

Query: 481  YLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDNDCEILYHPGKANVVADALSRK 540
            YLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKD DCEILYHPGKANVVADALSRK
Sbjct: 915  YLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK 974

Query: 541  VAHSATLITKQTPLLRDFERAEIAVSVGEVTAQLA 553
            VAHSA LITKQTPLLRDFERAEIAVSVGEVTAQLA
Sbjct: 975  VAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLA 1009

[Close]

BLAST of Cmc09g0243121.1 vs. NCBI nr
Match: KAA0063793.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1047.0 bits (2706), Expect = 5.9e-302
Identity = 533/575 (92.70%), Postives = 537/575 (93.39%), Query Frame = 0


Query: 1   MLDVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEVVFNPRSGASFKFRGAGMVCIPKV 60
           MLDVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEVVFNP S ASFKFRGAGMVCIPKV
Sbjct: 1   MLDVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEVVFNPPSEASFKFRGAGMVCIPKV 60

Query: 61  ISAMKASKLLSHGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFA 120
           ISAMKASKLLSHGTWGILASVVD+REPEVSLSSEPVVREYPDVFPD+LPGLPPPREVDFA
Sbjct: 61  ISAMKASKLLSHGTWGILASVVDMREPEVSLSSEPVVREYPDVFPDKLPGLPPPREVDFA 120

Query: 121 IELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSESPWGAPVLFVKKKDGSMR 180
           IELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPS SPWGAPVLFVKKKDGSMR
Sbjct: 121 IELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR 180

Query: 181 LCIDYRELNKVTVKNRYPLLRIDDLFDQLQGATFFSKIDRRSGYHQLRIRDGDIPKTAFR 240
           LCIDYRELNKVTVKNRYPL RIDDLFDQLQGAT FSKID RSGYHQLRIRDGDIPKTAFR
Sbjct: 181 LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFR 240

Query: 241 LRYGHYEFVVMSFGLTNAPAVFMDLMNRVFNDFLDSFVIVFIDDILIYSKTEAEHEEHLH 300
            RYGHYEFVVMSFGLTNAPAVFMDLMNRVF DFLDSFVIVFIDDILIYSKTEAEHEEHLH
Sbjct: 241 SRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLH 300

Query: 301 QVLKTLRANKF-----------------------EGVSVDPAKIEAVTNWPRPSTVSEIQ 360
           QVL+TLRANK                        EGVSVDPAKIEAVTNWPRPSTVSEI+
Sbjct: 301 QVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIR 360

Query: 361 SFLGLAGYYRRFVEDSSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPD 420
           SFLGLAGYYRRFVED SRIASPLTQLTRKGTPFVWSPACE SFQELKQKLVTAPVLTVPD
Sbjct: 361 SFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPD 420

Query: 421 GSVNFVIYSDASKKGLGSVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRH 480
           GS NFVIYSDASKKGLG VLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRH
Sbjct: 421 GSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRH 480

Query: 481 YLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDNDCEILYHPGKANVVADALSRK 540
           YLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKD DCEILYHPGKANVVADALSRK
Sbjct: 481 YLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK 540

Query: 541 VAHSATLITKQTPLLRDFERAEIAVSVGEVTAQLA 553
           VAHSA LITKQTPLLRDFERAEIAVSVGEVTAQLA
Sbjct: 541 VAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLA 575

[Close]

BLAST of Cmc09g0243121.1 vs. NCBI nr
Match: KAA0059723.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1046.6 bits (2705), Expect = 7.7e-302
Identity = 533/575 (92.70%), Postives = 537/575 (93.39%), Query Frame = 0


Query: 1    MLDVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEVVFNPRSGASFKFRGAGMVCIPKV 60
            MLDVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEVVFNP SGASFKFRGAGMVCIPKV
Sbjct: 437  MLDVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEVVFNPPSGASFKFRGAGMVCIPKV 496

Query: 61   ISAMKASKLLSHGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFA 120
            ISAMKASKLLS GTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFA
Sbjct: 497  ISAMKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFA 556

Query: 121  IELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSESPWGAPVLFVKKKDGSMR 180
            IELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPS SPWGAPVLFVKKKDGSMR
Sbjct: 557  IELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR 616

Query: 181  LCIDYRELNKVTVKNRYPLLRIDDLFDQLQGATFFSKIDRRSGYHQLRIRDGDIPKTAFR 240
            LCIDYRELNKVTVKNRYPL RIDDLFDQLQGAT FSKID RSGYHQLRIRDGDIPKTAFR
Sbjct: 617  LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFR 676

Query: 241  LRYGHYEFVVMSFGLTNAPAVFMDLMNRVFNDFLDSFVIVFIDDILIYSKTEAEHEEHLH 300
            LRYGHYEFVVMSFGLTN PAVFMDLMNRVF DFLDSFVIVFIDDILIYSKTEAEHEEHLH
Sbjct: 677  LRYGHYEFVVMSFGLTNTPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLH 736

Query: 301  QVLKTLRANKF-----------------------EGVSVDPAKIEAVTNWPRPSTVSEIQ 360
            QVL+TLRANK                        EGVSVDPAKIEAVTNWPRPSTVSEI+
Sbjct: 737  QVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIR 796

Query: 361  SFLGLAGYYRRFVEDSSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPD 420
            SFLGLAGYYRRFVED SRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPD
Sbjct: 797  SFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPD 856

Query: 421  GSVNFVIYSDASKKGLGSVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRH 480
            GS NFVIYSDASKKGLG VLMQQGKVVAYASRQLKIHEQNY THDLELAAVVFALK+WRH
Sbjct: 857  GSENFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYLTHDLELAAVVFALKMWRH 916

Query: 481  YLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDNDCEILYHPGKANVVADALSRK 540
            YLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKD DCEILYHPGKANVVADALSRK
Sbjct: 917  YLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK 976

Query: 541  VAHSATLITKQTPLLRDFERAEIAVSVGEVTAQLA 553
            V+HSA LITKQTPLLRDFERAEIAVSVGEVTAQLA
Sbjct: 977  VSHSAALITKQTPLLRDFERAEIAVSVGEVTAQLA 1011

[Close]

BLAST of Cmc09g0243121.1 vs. NCBI nr
Match: KAA0025998.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1046.2 bits (2704), Expect = 1.0e-301
Identity = 533/575 (92.70%), Postives = 536/575 (93.22%), Query Frame = 0


Query: 1    MLDVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEVVFNPRSGASFKFRGAGMVCIPKV 60
            MLDVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEVVFNP SGASFKFRGAGMVCIPKV
Sbjct: 463  MLDVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEVVFNPPSGASFKFRGAGMVCIPKV 522

Query: 61   ISAMKASKLLSHGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFA 120
            ISAMKASKLLS GTWGILASVVD+REPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFA
Sbjct: 523  ISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFA 582

Query: 121  IELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSESPWGAPVLFVKKKDGSMR 180
            IELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPS SPWGAPVLFVKKKDGSMR
Sbjct: 583  IELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR 642

Query: 181  LCIDYRELNKVTVKNRYPLLRIDDLFDQLQGATFFSKIDRRSGYHQLRIRDGDIPKTAFR 240
            LCIDYRELNKVTVKNRYPL RIDDLFDQLQGAT FSKID RSGYHQLRIRDGDIPKTAFR
Sbjct: 643  LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFR 702

Query: 241  LRYGHYEFVVMSFGLTNAPAVFMDLMNRVFNDFLDSFVIVFIDDILIYSKTEAEHEEHLH 300
             RYGHYEFVVMSFGLTNAPAVFMDLMNRVF DFLDSFVIVFIDDILIYSKTEAEHEEHLH
Sbjct: 703  SRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLH 762

Query: 301  QVLKTLRANKF-----------------------EGVSVDPAKIEAVTNWPRPSTVSEIQ 360
            QVL+TLRANK                        EGVSVDPAKIEAVTNW RPSTVSEI+
Sbjct: 763  QVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIR 822

Query: 361  SFLGLAGYYRRFVEDSSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPD 420
            SFLGLAGYYRRFVED SRIASPLTQLTRKGTPFVWSPACE SFQELKQKLVTAPVLTVPD
Sbjct: 823  SFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPD 882

Query: 421  GSVNFVIYSDASKKGLGSVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRH 480
            GS NFVIYSDASKKGLG VLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRH
Sbjct: 883  GSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRH 942

Query: 481  YLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDNDCEILYHPGKANVVADALSRK 540
            YLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKD DCEILYHPGKANVVADALSRK
Sbjct: 943  YLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK 1002

Query: 541  VAHSATLITKQTPLLRDFERAEIAVSVGEVTAQLA 553
            VAHSA LITKQTPLLRDFERAEIAVSVGEVTAQLA
Sbjct: 1003 VAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLA 1037

[Close]

BLAST of Cmc09g0243121.1 vs. NCBI nr
Match: KAA0045309.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1044.6 bits (2700), Expect = 2.9e-301
Identity = 531/575 (92.35%), Postives = 537/575 (93.39%), Query Frame = 0


Query: 1   MLDVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEVVFNPRSGASFKFRGAGMVCIPKV 60
           MLDVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEVVFNP SGASFKFRGAGMVCIPKV
Sbjct: 1   MLDVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEVVFNPPSGASFKFRGAGMVCIPKV 60

Query: 61  ISAMKASKLLSHGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFA 120
           ISAMKASKLLS GTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPP+EVDFA
Sbjct: 61  ISAMKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPKEVDFA 120

Query: 121 IELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSESPWGAPVLFVKKKDGSMR 180
           IELEPGTAPISRAPY+MAPAELKELKVQLQELLDKGFIRPS SPWGAPVLFVKKKDGSMR
Sbjct: 121 IELEPGTAPISRAPYKMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR 180

Query: 181 LCIDYRELNKVTVKNRYPLLRIDDLFDQLQGATFFSKIDRRSGYHQLRIRDGDIPKTAFR 240
           LCIDYRELNKVTVKNRYPL RIDDLFDQLQGAT FSKID RSGYHQLRIRDGDIPKTAFR
Sbjct: 181 LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFR 240

Query: 241 LRYGHYEFVVMSFGLTNAPAVFMDLMNRVFNDFLDSFVIVFIDDILIYSKTEAEHEEHLH 300
            RYGHYEFVV+SFGLTNAPAVFMDLMNRVF DFLDSFVIVFIDDILIYSKTEAEHEEHLH
Sbjct: 241 SRYGHYEFVVISFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLH 300

Query: 301 QVLKTLRANKF-----------------------EGVSVDPAKIEAVTNWPRPSTVSEIQ 360
           QVL+TLRANK                        EGVSVDPAKIEAVTNWPRPSTVSEI+
Sbjct: 301 QVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIR 360

Query: 361 SFLGLAGYYRRFVEDSSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPD 420
           SFLGLAGYYRRFVED SRIASPLTQLTRKGTPFVWSPACE SFQELKQKLVTAPVLTVPD
Sbjct: 361 SFLGLAGYYRRFVEDLSRIASPLTQLTRKGTPFVWSPACECSFQELKQKLVTAPVLTVPD 420

Query: 421 GSVNFVIYSDASKKGLGSVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRH 480
           GS NFVIYSDASKKGLG VLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRH
Sbjct: 421 GSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRH 480

Query: 481 YLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDNDCEILYHPGKANVVADALSRK 540
           YLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKD DCEILYHPGKANVVAD+LSRK
Sbjct: 481 YLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADSLSRK 540

Query: 541 VAHSATLITKQTPLLRDFERAEIAVSVGEVTAQLA 553
           VAHSA LITKQTPLLRDFERAEIAVSVGEVTAQLA
Sbjct: 541 VAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLA 575

[Close]

BLAST of Cmc09g0243121.1 vs. ExPASy Swiss-Prot
Match: P04323 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 286.2 bits (731), Expect = 7.9e-76
Identity = 158/424 (37.26%), Postives = 250/424 (58.96%), Query Frame = 0


Query: 135 YRMAPAELKELKVQLQELLDKGFIRPSESPWGAPVLFV-KKKDGS----MRLCIDYRELN 194
           Y    A  +E++ Q+Q++L++G IR S SP+ +P+  V KK+D S     R+ IDYR+LN
Sbjct: 213 YSYPQAYEQEVESQIQDMLNQGIIRTSNSPYNSPIWVVPKKQDASGKQKFRIVIDYRKLN 272

Query: 195 KVTVKNRYPLLRIDDLFDQLQGATFFSKIDRRSGYHQLRIRDGDIPKTAFRLRYGHYEFV 254
           ++TV +R+P+  +D++  +L    +F+ ID   G+HQ+ +    + KTAF  ++GHYE++
Sbjct: 273 EITVGDRHPIPNMDEILGKLGRCNYFTTIDLAKGFHQIEMDPESVSKTAFSTKHGHYEYL 332

Query: 255 VMSFGLTNAPAVFMDLMNRVFNDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLKTL-RA 314
            M FGL NAPA F   MN +    L+   +V++DDI+++S +  EH + L  V + L +A
Sbjct: 333 RMPFGLKNAPATFQRCMNDILRPLLNKHCLVYLDDIIVFSTSLDEHLQSLGLVFEKLAKA 392

Query: 315 N--------KF--------------EGVSVDPAKIEAVTNWPRPSTVSEIQSFLGLAGYY 374
           N        +F              +G+  +P KIEA+  +P P+   EI++FLGL GYY
Sbjct: 393 NLKLQLDKCEFLKQETTFLGHVLTPDGIKPNPEKIEAIQKYPIPTKPKEIKAFLGLTGYY 452

Query: 375 RRFVEDSSRIASPLTQLTRKGTPF-VWSPACESSFQELKQKLVTAPVLTVPDGSVNFVIY 434
           R+F+ + + IA P+T+  +K       +P  +S+F++LK  +   P+L VPD +  F + 
Sbjct: 453 RKFIPNFADIAKPMTKCLKKNMKIDTTNPEYDSAFKKLKYLISEDPILKVPDFTKKFTLT 512

Query: 435 SDASKKGLGSVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQ 494
           +DAS   LG+VL Q G  ++Y SR L  HE NY T + EL A+V+A K +RHYL G   +
Sbjct: 513 TDASDVALGAVLSQDGHPLSYISRTLNEHEINYSTIEKELLAIVWATKTFRHYLLGRHFE 572

Query: 495 IYTDHKSLKYFFTQKELNMRQRRWLELVKDNDCEILYHPGKANVVADALSRKVAHSATLI 530
           I +DH+ L + +  K+ N +  RW   + + D +I Y  GK N VADALSR +    T +
Sbjct: 573 ISSDHQPLSWLYRMKDPNSKLTRWRVKLSEFDFDIKYIKGKENCVADALSR-IKLEETYL 632

[Close]

BLAST of Cmc09g0243121.1 vs. ExPASy Swiss-Prot
Match: Q8I7P9 (Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 281.2 bits (718), Expect = 2.6e-74
Identity = 178/562 (31.67%), Postives = 288/562 (51.25%), Query Frame = 0


Query: 3   DVTLLVL-DMQDFDVILGMDWLSANHANIDCFGKEVVFNPRSGASFKFRGAGMVCIPKVI 62
           D+T  VL ++  FD I+G D L    A +D     ++  P  G          + +  ++
Sbjct: 19  DITFFVLPNLHSFDGIIGDDTLKDLKAIVDRKNNCLIITP--GIKIPLLARASINVNPLL 78

Query: 63  SAMKASKLLSHGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAI 122
           +A         GT  IL S++                E+P +F   L G+     V+ A+
Sbjct: 79  AAEHPD-----GTQEILNSLLG---------------EFPRIFEPPLSGM----SVETAV 138

Query: 123 ELEPGT---APISRAPYRMAPAELKELKVQLQELLDKGFIRPSESPWGAPVLFVKKK--- 182
           + E  T    PI    Y        E++ Q+ ELL  G IRPS SP+ +P+  V KK   
Sbjct: 139 KAEIRTNTQDPIYAKSYPYPVNMRGEVERQIDELLQDGIIRPSNSPYNSPIWIVPKKPKP 198

Query: 183 --DGSMRLCIDYRELNKVTVKNRYPLLRIDDLFDQLQGATFFSKIDRRSGYHQLRIRDGD 242
             +   R+ +D++ LN VT+ + YP+  I+     L  A +F+ +D  SG+HQ+ +++ D
Sbjct: 199 NGEKQYRMVVDFKRLNTVTIPDTYPIPDINATLASLGNAKYFTTLDLTSGFHQIHMKESD 258

Query: 243 IPKTAFRLRYGHYEFVVMSFGLTNAPAVFMDLMNRVFNDFLDSFVIVFIDDILIYSKTEA 302
           IPKTAF    G YEF+ + FGL NAPA+F  +++ +  + +     V+IDDI+++S+   
Sbjct: 259 IPKTAFSTLNGKYEFLRLPFGLKNAPAIFQRMIDDILREHIGKVCYVYIDDIIVFSEDYD 318

Query: 303 EHEEHLHQVLKTL-RAN----------------------KFEGVSVDPAKIEAVTNWPRP 362
            H ++L  VL +L +AN                        +G+  DP K+ A++  P P
Sbjct: 319 THWKNLRLVLASLSKANLQVNLEKSHFLDTQVEFLGYIVTADGIKADPKKVRAISEMPPP 378

Query: 363 STVSEIQSFLGLAGYYRRFVEDSSRIASPLTQLTR-----------KGTPFVWSPACESS 422
           ++V E++ FLG+  YYR+F++D +++A PLT LTR              P         S
Sbjct: 379 TSVKELKRFLGMTSYYRKFIQDYAKVAKPLTNLTRGLYANIKSSQSSKVPITLDETALQS 438

Query: 423 FQELKQKLVTAPVLTVPDGSVNFVIYSDASKKGLGSVLMQ----QGKVVAYASRQLKIHE 482
           F +LK  L ++ +L  P  +  F + +DAS   +G+VL Q    + + +AY SR L   E
Sbjct: 439 FNDLKSILCSSEILAFPCFTKPFHLTTDASNWAIGAVLSQDDQGRDRPIAYISRSLNKTE 498

Query: 483 QNYPTHDLELAAVVFALKIWRHYLYGE-KIQIYTDHKSLKYFFTQKELNMRQRRWLELVK 517
           +NY T + E+ A++++L   R YLYG   I++YTDH+ L +    +  N + +RW   ++
Sbjct: 499 ENYATIEKEMLAIIWSLDNLRAYLYGAGTIKVYTDHQPLTFALGNRNFNAKLKRWKARIE 554

[Close]

BLAST of Cmc09g0243121.1 vs. ExPASy Swiss-Prot
Match: Q99315 (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3)

HSP 1 Score: 276.6 bits (706), Expect = 6.3e-73
Identity = 174/497 (35.01%), Postives = 263/497 (52.92%), Query Frame = 0


Query: 65   KASKLLSHGTWGILASVVDIREPEVSLSSEP---------VVREYPDVFPDELPGLPPPR 124
            +AS L   G +  + S +   EP  +  S           + ++Y ++  ++LP  P P 
Sbjct: 520  EASILEEDGKYSNVVSTIQSVEPNATDHSNKDTFCTLPVWLQQKYREIIRNDLP--PRPA 579

Query: 125  EVD-----FAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSESPWGAPVL 184
            +++       IE++PG       PY +     +E+   +Q+LLD  FI PS+SP  +PV+
Sbjct: 580  DINNIPVKHDIEIKPGARLPRLQPYHVTEKNEQEINKIVQKLLDNKFIVPSKSPCSSPVV 639

Query: 185  FVKKKDGSMRLCIDYRELNKVTVKNRYPLLRIDDLFDQLQGATFFSKIDRRSGYHQLRIR 244
             V KKDG+ RLC+DYR LNK T+ + +PL RID+L  ++  A  F+ +D  SGYHQ+ + 
Sbjct: 640  LVPKKDGTFRLCVDYRTLNKATISDPFPLPRIDNLLSRIGNAQIFTTLDLHSGYHQIPME 699

Query: 245  DGDIPKTAFRLRYGHYEFVVMSFGLTNAPAVFMDLMNRVFNDFLDSFVIVFIDDILIYSK 304
              D  KTAF    G YE+ VM FGL NAP+ F   M   F D    FV V++DDILI+S+
Sbjct: 700  PKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTFARYMADTFRDL--RFVNVYLDDILIFSE 759

Query: 305  TEAEHEEHLHQVLKTLR----------------ANKFEGVSVDPAKI-------EAVTNW 364
            +  EH +HL  VL+ L+                  +F G S+   KI        A+ ++
Sbjct: 760  SPEEHWKHLDTVLERLKNENLIVKKKKCKFASEETEFLGYSIGIQKIAPLQHKCAAIRDF 819

Query: 365  PRPSTVSEIQSFLGLAGYYRRFVEDSSRIASPLTQLTRKGTPFVWSPACESSFQELKQKL 424
            P P TV + Q FLG+  YYRRF+ + S+IA P+       +   W+   + +  +LK  L
Sbjct: 820  PTPKTVKQAQRFLGMINYYRRFIPNCSKIAQPIQLFICDKSQ--WTEKQDKAIDKLKDAL 879

Query: 425  VTAPVLTVPDGSVNFVIYSDASKKGLGSVLMQQGK------VVAYASRQLKIHEQNYPTH 484
              +PVL   +   N+ + +DASK G+G+VL +         VV Y S+ L+  ++NYP  
Sbjct: 880  CNSPVLVPFNNKANYRLTTDASKDGIGAVLEEVDNKNKLVGVVGYFSKSLESAQKNYPAG 939

Query: 485  DLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDNDCEIL 519
            +LEL  ++ AL  +R+ L+G+   + TDH SL     + E   R +RWL+ +   D  + 
Sbjct: 940  ELELLGIIKALHHFRYMLHGKHFTLRTDHISLLSLQNKNEPARRVQRWLDDLATYDFTLE 999

[Close]

BLAST of Cmc09g0243121.1 vs. ExPASy Swiss-Prot
Match: Q7LHG5 (Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=1 SV=2)

HSP 1 Score: 276.6 bits (706), Expect = 6.3e-73
Identity = 173/497 (34.81%), Postives = 264/497 (53.12%), Query Frame = 0


Query: 65   KASKLLSHGTWGILASVVDIREPEVSLSSEP---------VVREYPDVFPDELPGLPPPR 124
            +AS L   G +  + S +   EP  +  S           + ++Y ++  ++LP  P P 
Sbjct: 546  EASILEEDGKYSNVVSTIQSVEPNATDHSNKDTFCTLPVWLQQKYREIIRNDLP--PRPA 605

Query: 125  EVD-----FAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSESPWGAPVL 184
            +++       IE++PG       PY +     +E+   +Q+LLD  FI PS+SP  +PV+
Sbjct: 606  DINNIPVKHDIEIKPGARLPRLQPYHVTEKNEQEINKIVQKLLDNKFIVPSKSPCSSPVV 665

Query: 185  FVKKKDGSMRLCIDYRELNKVTVKNRYPLLRIDDLFDQLQGATFFSKIDRRSGYHQLRIR 244
             V KKDG+ RLC+DYR LNK T+ + +PL RID+L  ++  A  F+ +D  SGYHQ+ + 
Sbjct: 666  LVPKKDGTFRLCVDYRTLNKATISDPFPLPRIDNLLSRIGNAQIFTTLDLHSGYHQIPME 725

Query: 245  DGDIPKTAFRLRYGHYEFVVMSFGLTNAPAVFMDLMNRVFNDFLDSFVIVFIDDILIYSK 304
              D  KTAF    G YE+ VM FGL NAP+ F   M   F D    FV V++DDILI+S+
Sbjct: 726  PKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTFARYMADTFRDL--RFVNVYLDDILIFSE 785

Query: 305  TEAEHEEHLHQVLKTLR----------------ANKFEGVSVDPAKI-------EAVTNW 364
            +  EH +HL  VL+ L+                  +F G S+   KI        A+ ++
Sbjct: 786  SPEEHWKHLDTVLERLKNENLIVKKKKCKFASEETEFLGYSIGIQKIAPLQHKCAAIRDF 845

Query: 365  PRPSTVSEIQSFLGLAGYYRRFVEDSSRIASPLTQLTRKGTPFVWSPACESSFQELKQKL 424
            P P TV + Q FLG+  YYRRF+ + S+IA P+       +   W+   + + ++LK  L
Sbjct: 846  PTPKTVKQAQRFLGMINYYRRFIPNCSKIAQPIQLFICDKSQ--WTEKQDKAIEKLKAAL 905

Query: 425  VTAPVLTVPDGSVNFVIYSDASKKGLGSVLMQQGK------VVAYASRQLKIHEQNYPTH 484
              +PVL   +   N+ + +DASK G+G+VL +         VV Y S+ L+  ++NYP  
Sbjct: 906  CNSPVLVPFNNKANYRLTTDASKDGIGAVLEEVDNKNKLVGVVGYFSKSLESAQKNYPAG 965

Query: 485  DLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDNDCEIL 519
            +LEL  ++ AL  +R+ L+G+   + TDH SL     + E   R +RWL+ +   D  + 
Sbjct: 966  ELELLGIIKALHHFRYMLHGKHFTLRTDHISLLSLQNKNEPARRVQRWLDDLATYDFTLE 1025

[Close]

BLAST of Cmc09g0243121.1 vs. ExPASy Swiss-Prot
Match: P20825 (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 273.1 bits (697), Expect = 7.0e-72
Identity = 150/418 (35.89%), Postives = 232/418 (55.50%), Query Frame = 0


Query: 128 APISRAPYRMAPAELKELKVQLQELLDKGFIRPSESPWGAPVLFVKKKD-----GSMRLC 187
           +PI    Y +A     E++ Q+QE+L++G IR S SP+ +P   V KK         R+ 
Sbjct: 205 SPIYSKQYPLAQTHEIEVENQVQEMLNQGLIRESNSPYNSPTWVVPKKPDASGANKYRVV 264

Query: 188 IDYRELNKVTVKNRYPLLRIDDLFDQLQGATFFSKIDRRSGYHQLRIRDGDIPKTAFRLR 247
           IDYR+LN++T+ +RYP+  +D++  +L    +F+ ID   G+HQ+ + +  I KTAF  +
Sbjct: 265 IDYRKLNEITIPDRYPIPNMDEILGKLGKCQYFTTIDLAKGFHQIEMDEESISKTAFSTK 324

Query: 248 YGHYEFVVMSFGLTNAPAVFMDLMNRVFNDFLDSFVIVFIDDILIYSKTEAEHEEHLHQV 307
            GHYE++ M FGL NAPA F   MN +    L+   +V++DDI+I+S +  EH   +  V
Sbjct: 325 SGHYEYLRMPFGLRNAPATFQRCMNNILRPLLNKHCLVYLDDIIIFSTSLTEHLNSIQLV 384

Query: 308 LKTL-----------------RANKF------EGVSVDPAKIEAVTNWPRPSTVSEIQSF 367
              L                  AN        +G+  +P K++A+ ++P P+   EI++F
Sbjct: 385 FTKLADANLKLQLDKCEFLKKEANFLGHIVTPDGIKPNPIKVKAIVSYPIPTKDKEIRAF 444

Query: 368 LGLAGYYRRFVEDSSRIASPLTQLTRKGTPF-VWSPACESSFQELKQKLVTAPVLTVPDG 427
           LGL GYYR+F+ + + IA P+T   +K T           +F++LK  ++  P+L +PD 
Sbjct: 445 LGLTGYYRKFIPNYADIAKPMTSCLKKRTKIDTQKLEYIEAFEKLKALIIRDPILQLPDF 504

Query: 428 SVNFVIYSDASKKGLGSVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHY 487
              FV+ +DAS   LG+VL Q G  +++ SR L  HE NY   + EL A+V+A K +RHY
Sbjct: 505 EKKFVLTTDASNLALGAVLSQNGHPISFISRTLNDHELNYSAIEKELLAIVWATKTFRHY 564

Query: 488 LYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDNDCEILYHPGKANVVADALSR 517
           L G +  I +DH+ L++    KE   +  RW   + +   +I Y  GK N VADALSR
Sbjct: 565 LLGRQFLIASDHQPLRWLHNLKEPGAKLERWRVRLSEYQFKIDYIKGKENSVADALSR 622

[Close]

BLAST of Cmc09g0243121.1 vs. ExPASy TrEMBL
Match: A0A5A7V4E4 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold72G00400 PE=4 SV=1)

HSP 1 Score: 1048.1 bits (2709), Expect = 1.3e-302
Identity = 534/575 (92.87%), Postives = 537/575 (93.39%), Query Frame = 0


Query: 1    MLDVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEVVFNPRSGASFKFRGAGMVCIPKV 60
            MLDVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEVVFNP SGASFKFRGAGMVCIPKV
Sbjct: 435  MLDVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEVVFNPPSGASFKFRGAGMVCIPKV 494

Query: 61   ISAMKASKLLSHGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFA 120
            ISAMKASKLLS GTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFA
Sbjct: 495  ISAMKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFA 554

Query: 121  IELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSESPWGAPVLFVKKKDGSMR 180
            IELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPS SPWGAPVLFVKKKDGSMR
Sbjct: 555  IELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR 614

Query: 181  LCIDYRELNKVTVKNRYPLLRIDDLFDQLQGATFFSKIDRRSGYHQLRIRDGDIPKTAFR 240
            LCIDYRELNKVTVKNRYPL +IDDLFDQLQGAT FSKID RSGYHQLRIRDGDIPKTAFR
Sbjct: 615  LCIDYRELNKVTVKNRYPLPKIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFR 674

Query: 241  LRYGHYEFVVMSFGLTNAPAVFMDLMNRVFNDFLDSFVIVFIDDILIYSKTEAEHEEHLH 300
             RYGHYEFVVMSFGLTNAPAVFMDLMNRVF DFLDSFVIVFIDDILIYSKTEAEHEEHLH
Sbjct: 675  SRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLH 734

Query: 301  QVLKTLRANKF-----------------------EGVSVDPAKIEAVTNWPRPSTVSEIQ 360
            QVL+TLRANK                        EGVSVDPAKIEAVTNWPRPSTVSEI+
Sbjct: 735  QVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIR 794

Query: 361  SFLGLAGYYRRFVEDSSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPD 420
            SFLGLAGYYRRFVED SRIASPLTQLTRKGTPFVWSPACESSFQELKQKLV APVLTVPD
Sbjct: 795  SFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVIAPVLTVPD 854

Query: 421  GSVNFVIYSDASKKGLGSVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRH 480
            GS NFVIYSDASKKGLG VLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRH
Sbjct: 855  GSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRH 914

Query: 481  YLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDNDCEILYHPGKANVVADALSRK 540
            YLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKD DCEILYHPGKANVVADALSRK
Sbjct: 915  YLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK 974

Query: 541  VAHSATLITKQTPLLRDFERAEIAVSVGEVTAQLA 553
            VAHSA LITKQTPLLRDFERAEIAVSVGEVTAQLA
Sbjct: 975  VAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLA 1009

[Close]

BLAST of Cmc09g0243121.1 vs. ExPASy TrEMBL
Match: A0A5A7V6R2 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold827G00070 PE=4 SV=1)

HSP 1 Score: 1047.0 bits (2706), Expect = 2.8e-302
Identity = 533/575 (92.70%), Postives = 537/575 (93.39%), Query Frame = 0


Query: 1   MLDVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEVVFNPRSGASFKFRGAGMVCIPKV 60
           MLDVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEVVFNP S ASFKFRGAGMVCIPKV
Sbjct: 1   MLDVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEVVFNPPSEASFKFRGAGMVCIPKV 60

Query: 61  ISAMKASKLLSHGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFA 120
           ISAMKASKLLSHGTWGILASVVD+REPEVSLSSEPVVREYPDVFPD+LPGLPPPREVDFA
Sbjct: 61  ISAMKASKLLSHGTWGILASVVDMREPEVSLSSEPVVREYPDVFPDKLPGLPPPREVDFA 120

Query: 121 IELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSESPWGAPVLFVKKKDGSMR 180
           IELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPS SPWGAPVLFVKKKDGSMR
Sbjct: 121 IELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR 180

Query: 181 LCIDYRELNKVTVKNRYPLLRIDDLFDQLQGATFFSKIDRRSGYHQLRIRDGDIPKTAFR 240
           LCIDYRELNKVTVKNRYPL RIDDLFDQLQGAT FSKID RSGYHQLRIRDGDIPKTAFR
Sbjct: 181 LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFR 240

Query: 241 LRYGHYEFVVMSFGLTNAPAVFMDLMNRVFNDFLDSFVIVFIDDILIYSKTEAEHEEHLH 300
            RYGHYEFVVMSFGLTNAPAVFMDLMNRVF DFLDSFVIVFIDDILIYSKTEAEHEEHLH
Sbjct: 241 SRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLH 300

Query: 301 QVLKTLRANKF-----------------------EGVSVDPAKIEAVTNWPRPSTVSEIQ 360
           QVL+TLRANK                        EGVSVDPAKIEAVTNWPRPSTVSEI+
Sbjct: 301 QVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIR 360

Query: 361 SFLGLAGYYRRFVEDSSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPD 420
           SFLGLAGYYRRFVED SRIASPLTQLTRKGTPFVWSPACE SFQELKQKLVTAPVLTVPD
Sbjct: 361 SFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPD 420

Query: 421 GSVNFVIYSDASKKGLGSVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRH 480
           GS NFVIYSDASKKGLG VLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRH
Sbjct: 421 GSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRH 480

Query: 481 YLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDNDCEILYHPGKANVVADALSRK 540
           YLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKD DCEILYHPGKANVVADALSRK
Sbjct: 481 YLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK 540

Query: 541 VAHSATLITKQTPLLRDFERAEIAVSVGEVTAQLA 553
           VAHSA LITKQTPLLRDFERAEIAVSVGEVTAQLA
Sbjct: 541 VAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLA 575

[Close]

BLAST of Cmc09g0243121.1 vs. ExPASy TrEMBL
Match: A0A5A7UUX8 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1395G00080 PE=4 SV=1)

HSP 1 Score: 1046.6 bits (2705), Expect = 3.7e-302
Identity = 533/575 (92.70%), Postives = 537/575 (93.39%), Query Frame = 0


Query: 1    MLDVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEVVFNPRSGASFKFRGAGMVCIPKV 60
            MLDVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEVVFNP SGASFKFRGAGMVCIPKV
Sbjct: 437  MLDVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEVVFNPPSGASFKFRGAGMVCIPKV 496

Query: 61   ISAMKASKLLSHGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFA 120
            ISAMKASKLLS GTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFA
Sbjct: 497  ISAMKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFA 556

Query: 121  IELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSESPWGAPVLFVKKKDGSMR 180
            IELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPS SPWGAPVLFVKKKDGSMR
Sbjct: 557  IELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR 616

Query: 181  LCIDYRELNKVTVKNRYPLLRIDDLFDQLQGATFFSKIDRRSGYHQLRIRDGDIPKTAFR 240
            LCIDYRELNKVTVKNRYPL RIDDLFDQLQGAT FSKID RSGYHQLRIRDGDIPKTAFR
Sbjct: 617  LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFR 676

Query: 241  LRYGHYEFVVMSFGLTNAPAVFMDLMNRVFNDFLDSFVIVFIDDILIYSKTEAEHEEHLH 300
            LRYGHYEFVVMSFGLTN PAVFMDLMNRVF DFLDSFVIVFIDDILIYSKTEAEHEEHLH
Sbjct: 677  LRYGHYEFVVMSFGLTNTPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLH 736

Query: 301  QVLKTLRANKF-----------------------EGVSVDPAKIEAVTNWPRPSTVSEIQ 360
            QVL+TLRANK                        EGVSVDPAKIEAVTNWPRPSTVSEI+
Sbjct: 737  QVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIR 796

Query: 361  SFLGLAGYYRRFVEDSSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPD 420
            SFLGLAGYYRRFVED SRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPD
Sbjct: 797  SFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPD 856

Query: 421  GSVNFVIYSDASKKGLGSVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRH 480
            GS NFVIYSDASKKGLG VLMQQGKVVAYASRQLKIHEQNY THDLELAAVVFALK+WRH
Sbjct: 857  GSENFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYLTHDLELAAVVFALKMWRH 916

Query: 481  YLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDNDCEILYHPGKANVVADALSRK 540
            YLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKD DCEILYHPGKANVVADALSRK
Sbjct: 917  YLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK 976

Query: 541  VAHSATLITKQTPLLRDFERAEIAVSVGEVTAQLA 553
            V+HSA LITKQTPLLRDFERAEIAVSVGEVTAQLA
Sbjct: 977  VSHSAALITKQTPLLRDFERAEIAVSVGEVTAQLA 1011

[Close]

BLAST of Cmc09g0243121.1 vs. ExPASy TrEMBL
Match: A0A5A7SIJ5 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold34G003210 PE=4 SV=1)

HSP 1 Score: 1046.2 bits (2704), Expect = 4.8e-302
Identity = 533/575 (92.70%), Postives = 536/575 (93.22%), Query Frame = 0


Query: 1    MLDVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEVVFNPRSGASFKFRGAGMVCIPKV 60
            MLDVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEVVFNP SGASFKFRGAGMVCIPKV
Sbjct: 463  MLDVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEVVFNPPSGASFKFRGAGMVCIPKV 522

Query: 61   ISAMKASKLLSHGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFA 120
            ISAMKASKLLS GTWGILASVVD+REPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFA
Sbjct: 523  ISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFA 582

Query: 121  IELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSESPWGAPVLFVKKKDGSMR 180
            IELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPS SPWGAPVLFVKKKDGSMR
Sbjct: 583  IELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR 642

Query: 181  LCIDYRELNKVTVKNRYPLLRIDDLFDQLQGATFFSKIDRRSGYHQLRIRDGDIPKTAFR 240
            LCIDYRELNKVTVKNRYPL RIDDLFDQLQGAT FSKID RSGYHQLRIRDGDIPKTAFR
Sbjct: 643  LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFR 702

Query: 241  LRYGHYEFVVMSFGLTNAPAVFMDLMNRVFNDFLDSFVIVFIDDILIYSKTEAEHEEHLH 300
             RYGHYEFVVMSFGLTNAPAVFMDLMNRVF DFLDSFVIVFIDDILIYSKTEAEHEEHLH
Sbjct: 703  SRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLH 762

Query: 301  QVLKTLRANKF-----------------------EGVSVDPAKIEAVTNWPRPSTVSEIQ 360
            QVL+TLRANK                        EGVSVDPAKIEAVTNW RPSTVSEI+
Sbjct: 763  QVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIR 822

Query: 361  SFLGLAGYYRRFVEDSSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPD 420
            SFLGLAGYYRRFVED SRIASPLTQLTRKGTPFVWSPACE SFQELKQKLVTAPVLTVPD
Sbjct: 823  SFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPD 882

Query: 421  GSVNFVIYSDASKKGLGSVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRH 480
            GS NFVIYSDASKKGLG VLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRH
Sbjct: 883  GSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRH 942

Query: 481  YLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDNDCEILYHPGKANVVADALSRK 540
            YLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKD DCEILYHPGKANVVADALSRK
Sbjct: 943  YLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK 1002

Query: 541  VAHSATLITKQTPLLRDFERAEIAVSVGEVTAQLA 553
            VAHSA LITKQTPLLRDFERAEIAVSVGEVTAQLA
Sbjct: 1003 VAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLA 1037

[Close]

BLAST of Cmc09g0243121.1 vs. ExPASy TrEMBL
Match: A0A5A7TVN9 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold316G00750 PE=4 SV=1)

HSP 1 Score: 1044.6 bits (2700), Expect = 1.4e-301
Identity = 531/575 (92.35%), Postives = 537/575 (93.39%), Query Frame = 0


Query: 1   MLDVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEVVFNPRSGASFKFRGAGMVCIPKV 60
           MLDVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEVVFNP SGASFKFRGAGMVCIPKV
Sbjct: 1   MLDVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEVVFNPPSGASFKFRGAGMVCIPKV 60

Query: 61  ISAMKASKLLSHGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFA 120
           ISAMKASKLLS GTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPP+EVDFA
Sbjct: 61  ISAMKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPKEVDFA 120

Query: 121 IELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSESPWGAPVLFVKKKDGSMR 180
           IELEPGTAPISRAPY+MAPAELKELKVQLQELLDKGFIRPS SPWGAPVLFVKKKDGSMR
Sbjct: 121 IELEPGTAPISRAPYKMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR 180

Query: 181 LCIDYRELNKVTVKNRYPLLRIDDLFDQLQGATFFSKIDRRSGYHQLRIRDGDIPKTAFR 240
           LCIDYRELNKVTVKNRYPL RIDDLFDQLQGAT FSKID RSGYHQLRIRDGDIPKTAFR
Sbjct: 181 LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFR 240

Query: 241 LRYGHYEFVVMSFGLTNAPAVFMDLMNRVFNDFLDSFVIVFIDDILIYSKTEAEHEEHLH 300
            RYGHYEFVV+SFGLTNAPAVFMDLMNRVF DFLDSFVIVFIDDILIYSKTEAEHEEHLH
Sbjct: 241 SRYGHYEFVVISFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLH 300

Query: 301 QVLKTLRANKF-----------------------EGVSVDPAKIEAVTNWPRPSTVSEIQ 360
           QVL+TLRANK                        EGVSVDPAKIEAVTNWPRPSTVSEI+
Sbjct: 301 QVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIR 360

Query: 361 SFLGLAGYYRRFVEDSSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPD 420
           SFLGLAGYYRRFVED SRIASPLTQLTRKGTPFVWSPACE SFQELKQKLVTAPVLTVPD
Sbjct: 361 SFLGLAGYYRRFVEDLSRIASPLTQLTRKGTPFVWSPACECSFQELKQKLVTAPVLTVPD 420

Query: 421 GSVNFVIYSDASKKGLGSVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRH 480
           GS NFVIYSDASKKGLG VLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRH
Sbjct: 421 GSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRH 480

Query: 481 YLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDNDCEILYHPGKANVVADALSRK 540
           YLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKD DCEILYHPGKANVVAD+LSRK
Sbjct: 481 YLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADSLSRK 540

Query: 541 VAHSATLITKQTPLLRDFERAEIAVSVGEVTAQLA 553
           VAHSA LITKQTPLLRDFERAEIAVSVGEVTAQLA
Sbjct: 541 VAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLA 575

[Close]

BLAST of Cmc09g0243121.1 vs. TAIR 10
Match: ATMG00860.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 94.0 bits (232), Expect = 4.1e-19
Identity = 43/92 (46.74%), Postives = 60/92 (65.22%), Query Frame = 0


Query: 312 EGVSVDPAKIEAVTNWPRPSTVSEIQSFLGLAGYYRRFVEDSSRIASPLTQLTRKGTPFV 371
           EGVS DPAK+EA+  WP P   +E++ FLGL GYYRRFV++  +I  PLT+L +K +   
Sbjct: 42  EGVSADPAKLEAMVGWPEPKNTTELRGFLGLTGYYRRFVKNYGKIVRPLTELLKKNS-LK 101

Query: 372 WSPACESSFQELKQKLVTAPVLTVPDGSVNFV 404
           W+     +F+ LK  + T PVL +PD  + FV
Sbjct: 102 WTEMAALAFKALKGAVTTLPVLALPDLKLPFV 132

The following BLAST results are available for this feature:

BLAST of Cmc09g0243121.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0060745.1	2.6e-302	92.87	pol protein [Cucumis melo var. makuwa]	[more]
KAA0063793.1	5.9e-302	92.70	pol protein [Cucumis melo var. makuwa]	[more]
KAA0059723.1	7.7e-302	92.70	pol protein [Cucumis melo var. makuwa]	[more]
KAA0025998.1	1.0e-301	92.70	pol protein [Cucumis melo var. makuwa]	[more]
KAA0045309.1	2.9e-301	92.35	pol protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc09g0243121.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P04323	7.9e-76	37.26	Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogast...	[more]
Q8I7P9	2.6e-74	31.67	Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogast...	[more]
Q99315	6.3e-73	35.01	Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
Q7LHG5	6.3e-73	34.81	Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
P20825	7.0e-72	35.89	Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaste...	[more]

BLAST of Cmc09g0243121.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V4E4	1.3e-302	92.87	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold72...	[more]
A0A5A7V6R2	2.8e-302	92.70	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82...	[more]
A0A5A7UUX8	3.7e-302	92.70	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold13...	[more]
A0A5A7SIJ5	4.8e-302	92.70	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold34...	[more]
A0A5A7TVN9	1.4e-301	92.35	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold31...	[more]

BLAST of Cmc09g0243121.1 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00860.1	4.1e-19	46.74	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF08284	RVP_2	coord: 4..42 e-value: 2.0E-12 score: 47.1
None	No IPR available	GENE3D	3.10.10.10	HIV Type 1 Reverse Transcriptase, subunit A, domain 1	coord: 118..257 e-value: 2.5E-81 score: 274.1
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 312..521 coord: 6..248
None	No IPR available	PANTHER	PTHR24559:SF383	DNA/RNA POLYMERASES SUPERFAMILY PROTEIN	coord: 312..521 coord: 6..248
None	No IPR available	CDD	cd01647	RT_LTR	coord: 156..320 e-value: 6.21367E-82 score: 251.746
None	No IPR available	CDD	cd09274	RNase_HI_RT_Ty3	coord: 403..518 e-value: 2.31296E-57 score: 185.774
IPR021109	Aspartic peptidase domain superfamily	GENE3D	2.40.70.10	Acid Proteases	coord: 1..49 e-value: 9.2E-8 score: 33.8
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 197..312 e-value: 2.5E-81 score: 274.1
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 323..410 e-value: 1.1E-31 score: 110.7
IPR041373	Reverse transcriptase, RNase H-like domain	PFAM	PF17917	RT_RNaseH	coord: 400..492 e-value: 9.5E-33 score: 112.7
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 172..341 e-value: 3.8E-23 score: 82.2
IPR000477	Reverse transcriptase domain	PROSITE	PS50878	RT_POL	coord: 153..344 score: 12.073462
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 96..502

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cmc09g0243121	Cmc09g0243121	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc09g0243121.1-exon	Cmc09g0243121.1-exon-CMiso1.1chr09:5560719..5561650	exon
Cmc09g0243121.1-exon	Cmc09g0243121.1-exon-CMiso1.1chr09:5561720..5562446	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc09g0243121.1-cds	Cmc09g0243121.1-cds-CMiso1.1chr09:5560719..5561650	CDS
Cmc09g0243121.1-cds	Cmc09g0243121.1-cds-CMiso1.1chr09:5561720..5562446	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cmc09g0243121.1	Cmc09g0243121.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006508	proteolysis
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003964	RNA-directed DNA polymerase activity
molecular_function	GO:0008194	UDP-glycosyltransferase activity
molecular_function	GO:0008270	zinc ion binding