Cmc08g0227121.1 (mRNA) Melon (Charmono) v1.1

Overview
NameCmc08g0227121.1
TypemRNA
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionUnknown protein
LocationCMiso1.1chr08: 19922110 .. 19922978 (+)
Sequence length825
RNA-Seq ExpressionCmc08g0227121.1
SyntenyCmc08g0227121.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTAATTACTAATTGGATGATATAAATAGTGCTACATTATATTATTCTACACATGTGTTCACTTGCGGGCATAAAGTTAATATACTTTTGACCTTTTTTATAGAATCACCTTCAAATGAAGGGTTGGAAAAAAGATTCTCTCGCCACAATTAATGATAACAAAAATTAAAAAACCATGACGACAAAATTATTATTCTAAACCTCCAATTCATTAAACTTTCTTTTTTTTTTTTTTTTTATGTCAAACCACAAACCCATCTTCTTTGCCAATTTTAAAAAATATACAGCAAGAAGAAAGCTAAGACATACACACATGTTTTTTGAACTAGGGTTCAAATCATTCTAACCCTAAAACCATCCAACTAAACAAAAGTACTCCTCAACAAGACTGGAAAGACAAAGCAAGTGGACGGTGGTAGTGGTGATGGTGGTGGCGATGACGATGATGATTTTGTTTGTCAATATGTTGGTCAGATTCTTTCTCGATCTGCCATCGGAGTTGGAGAAAGTCGTCGATTGAGCACGGAAGCCGAAGAGGACCATTGGCATGGTAGCCGTAAATTTCTTGAGCTTTGTCCAAAAGATTCTTGAATAGAGGGTGATATAAATAAGAAATTGGAACTACGAATCTTTCAATTCTTTCATCTTCCTCTTGCAACCCTACTTCCACAGCTAACCATCCTTTCTTTACTTTCATTTTCTTCTTATCGGGCATCTTTCTTTTCATCTCACAGTTTCATTGTTTGTAATGGACATATATATACACACACATATACTTGGTTAGAGAGTGGTGGGTGTAAAGGAATTTCGTTTTCTTTTAAAACTGTCATATCGAATCAAGTATTGATTGCTTTTTGACTTGTCCATTTT

mRNA sequence

TTAATTACTAATTGGATGATATAAATAGTGCTACATTATATTATTCTACACATGTGTTCACTTGCGGGCATAAAGTTAATATACTTTTGACCTTTTTTATAGAATCACCTTCAAATGAAGGGTTGGAAAAAAGATTCTCTCGCCACAATTAATGATAACAAAAATTAAAAAACCATGACGACAAAATTATTATTCTAAACCTCCAATTCATTAAACTTTCTTTTTTTTTTTTTTTTTATGTCAAACCACAAACCCATCTTCTTTGCCAATTTTAAAAAATATACAGCAAGAAGAAAGCTAAGACATACACACATGTTTTTTGAACTAGGGTTCAAATCATTCTAACCCTAAAACCATCCAACTAAACAAAAGTACTCCTCAACAAGACTGGAAAGACAAAGCAAGTGGACGGTGGTAGTGGTGATGGTGATTCTTTCTCGATCTGCCATCGGAGTTGGAGAAAGTCGTCGATTGAGCACGGAAGCCGAAGAGGACCATTGGCATGGTAGCCGTAAATTTCTTGAGCTTTGTCCAAAAGATTCTTGAATAGAGGGTGATATAAATAAGAAATTGGAACTACGAATCTTTCAATTCTTTCATCTTCCTCTTGCAACCCTACTTCCACAGCTAACCATCCTTTCTTTACTTTCATTTTCTTCTTATCGGGCATCTTTCTTTTCATCTCACAGTTTCATTGTTTGTAATGGACATATATATACACACACATATACTTGGTTAGAGAGTGGTGGGTGTAAAGGAATTTCGTTTTCTTTTAAAACTGTCATATCGAATCAAGTATTGATTGCTTTTTGACTTGTCCATTTT

Coding sequence (CDS)

ATGGTGATTCTTTCTCGATCTGCCATCGGAGTTGGAGAAAGTCGTCGATTGAGCACGGAAGCCGAAGAGGACCATTGGCATGGTAGCCGTAAATTTCTTGAGCTTTGTCCAAAAGATTCTTGA

Protein sequence

MVILSRSAIGVGESRRLSTEAEEDHWHGSRKFLELCPKDS
Homology
The following BLAST results are available for this feature:
BLAST of Cmc08g0227121.1 vs.
Match NameE-valueIdentityDescription
BLAST of Cmc08g0227121.1 vs.
Match NameE-valueIdentityDescription
BLAST of Cmc08g0227121.1 vs.
Match NameE-valueIdentityDescription
BLAST of Cmc08g0227121.1 vs.
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cmc08g0227121Cmc08g0227121gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cmc08g0227121.1-exonCmc08g0227121.1-exon-CMiso1.1chr08:19922110..19922538exon
Cmc08g0227121.1-exonCmc08g0227121.1-exon-CMiso1.1chr08:19922583..19922978exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cmc08g0227121.1-five_prime_utrCmc08g0227121.1-five_prime_utr-CMiso1.1chr08:19922110..19922532five_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cmc08g0227121.1-cdsCmc08g0227121.1-cds-CMiso1.1chr08:19922533..19922538CDS
Cmc08g0227121.1-cdsCmc08g0227121.1-cds-CMiso1.1chr08:19922583..19922699CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cmc08g0227121.1-three_prime_utrCmc08g0227121.1-three_prime_utr-CMiso1.1chr08:19922700..19922978three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cmc08g0227121.1Cmc08g0227121.1-proteinpolypeptide