Cmc08g0216971.1 (mRNA) Melon (Charmono) v1.1

Overview
NameCmc08g0216971.1
TypemRNA
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionUnknown protein
LocationCMiso1.1chr08: 5882539 .. 5883724 (+)
Sequence length1186
RNA-Seq ExpressionCmc08g0216971.1
SyntenyCmc08g0216971.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TTCAATCAGTTAAAAGGGTTTAGCATAAAATATCGTGCCATGATAAATGAATTGTGTTTATTCGCCTTCATCTCACTGAACAATTGTTCTTAACGAAACAGATACAGATTCAATTTGAATTCATTGAGTTTACAACAGCAAACAGATCCAATTTTCAATTACAAACTGTTGGCTGAAAGCCTGAAATTGAAATCTCAAGAATTGGGGGGCGCCGAACCTTTCTCGCAAAGCTTGTTGTAATCTTCAAGCTCTTCGTAATACACGTCCCACACACATCGAACACATCCACTCCCACAACAATCTCCCGGCAACGGCTTCTCCGGCGGCGGTGGCAATTTCACAATCTTCTCTTTTTCTTTCTCTTTCTTTTCCTCCTTCTCTACTTTCTCCTCCTCCGCGCCTTTCTTCTTTGAATCAACTGATGATTGCATTTCTCTGGTTGCCTCGCTAGCCATGATCGAATTAGGGTAAATTGTTGATGATTGGAAAGTAGGAATTATTTTCGTAGGGACTCGCCTCATAACCCAGGGAAGAAATGGCCGCACATACTCTGGCCTTAATCGGCGAAGACAATTTGAATTATGATTCGGTAAAGATGACAGAAAAAGGGCATTCGGAGCAAAATTTGGCTCGATCAATTTCATAAAAATAGATCGCCCCCGACAGCCAATTGTAGCTTCTTGTCGTCGGAAGGGTCAAACTTGTTCAAAATTGGGTGCCCTAATTATCGCCACACCAAACCCGACACGGCGCCGCCCTGGGCTTTAATTGGGCCGCTAGCCCAGTTACCAATTGCCAGCCCAAATCCAAAGGGTATTGCTGGGAAAAAGGAAAGGTAAAAGAGTAAATACATTTTCTAAAAATGAAATGGAAGATTGCAAATTGACATTATTCTTTATTATTATTCTGCAAATTGACATTTTTATTGGTCGTATTGGATTTTGATCACATGATGTTTGTGACATACGAGGTTTCGATAGTATGGACTAAGGATTATTTGCTTATTAATGTCAGATTTCTGAAGACTCGGTTATGCATAGGCAGAAACCATGTTTTTATTTTTTTTTTCCGTTGTCTTGTCTTATTCATTTTTTTTCATTACTTCCATTATAAAAAAAAAAAAAAAAAGACGAATTTGCCATTATATTATATATTTCTATTCCAACCGTTTCTTACCAAGAATTAA

mRNA sequence

TTCAATCAGTTAAAAGGGTTTAGCATAAAATATCGTGCCATGATAAATGAATTGTGTTTATTCGCCTTCATCTCACTGAACAATTGTTCTTAACGAAACAGATACAGATTCAATTTGAATTCATTGAGTTTACAACAGCAAACAGATCCAATTTTCAATTACAAACTGTTGGCTGAAAGCCTGAAATTGAAATCTCAAGAATTGGGGGGCGCCGAACCTTTCTCGCAAAGCTTGTTGTAATCTTCAAGCTCTTCGTAATACACGTCCCACACACATCGAACACATCCACTCCCACAACAATCTCCCGGCAACGGCTTCTCCGGCGGCGGTGGCAATTTCACAATCTTCTCTTTTTCTTTCTCTTTCTTTTCCTCCTTCTCTACTTTCTCCTCCTCCGCGCCTTTCTTCTTTGAATCAACTGATGATTGCATTTCTCTGGTTGCCTCGCTAGCCATGATCGAATTAGGGTAAATTGTTGATGATTGGAAAGTAGGAATTATTTTCGTAGGGACTCGCCTCATAACCCAGGGAAGAAATGGCCGCACATACTCTGGCCTTAATCGGCGAAGACAATTTGAATTATGATTCGGTAAAGATGACAGAAAAAGGGCATTCGGAGCAAAATTTGGCTCGATCAATTTCATAAAAATAGATCGCCCCCGACAGCCAATTGTAGCTTCTTGTCGTCGGAAGGGTCAAACTTGTTCAAAATTGGGTGCCCTAATTATCGCCACACCAAACCCGACACGGCGCCGCCCTGGGCTTTAATTGGGCCGCTAGCCCAGTTACCAATTGCCAGCCCAAATCCAAAGGGTATTGCTGGGAAAAAGGAAAGGTAAAAGAGTAAATACATTTTCTAAAAATGAAATGGAAGATTGCAAATTGACATTATTCTTTATTATTATTCTGCAAATTGACATTTTTATTGGTCGTATTGGATTTTGATCACATGATGTTTGTGACATACGAGGTTTCGATAGTATGGACTAAGGATTATTTGCTTATTAATGTCAGATTTCTGAAGACTCGGTTATGCATAGGCAGAAACCATGTTTTTATTTTTTTTTTCCGTTGTCTTGTCTTATTCATTTTTTTTCATTACTTCCATTATAAAAAAAAAAAAAAAAAGACGAATTTGCCATTATATTATATATTTCTATTCCAACCGTTTCTTACCAAGAATTAA

Coding sequence (CDS)

ATGATGTTTGTGACATACGAGGTTTCGATAGTATGGACTAAGGATTATTTGCTTATTAATGTCAGATTTCTGAAGACTCGGTTATGCATAGGCAGAAACCATGTTTTTATTTTTTTTTTCCGTTGTCTTGTCTTATTCATTTTTTTTCATTACTTCCATTATAAAAAAAAAAAAAAAAAGACGAATTTGCCATTATATTATATATTTCTATTCCAACCGTTTCTTACCAAGAATTAA

Protein sequence

MMFVTYEVSIVWTKDYLLINVRFLKTRLCIGRNHVFIFFFRCLVLFIFFHYFHYKKKKKKTNLPLYYIFLFQPFLTKN
Homology
The following BLAST results are available for this feature:
BLAST of Cmc08g0216971.1 vs.
Match NameE-valueIdentityDescription
BLAST of Cmc08g0216971.1 vs.
Match NameE-valueIdentityDescription
BLAST of Cmc08g0216971.1 vs.
Match NameE-valueIdentityDescription
BLAST of Cmc08g0216971.1 vs.
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cmc08g0216971Cmc08g0216971gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cmc08g0216971.1-exonCmc08g0216971.1-exon-CMiso1.1chr08:5882539..5883724exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cmc08g0216971.1-five_prime_utrCmc08g0216971.1-five_prime_utr-CMiso1.1chr08:5882539..5883487five_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cmc08g0216971.1-cdsCmc08g0216971.1-cds-CMiso1.1chr08:5883488..5883724CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cmc08g0216971.1Cmc08g0216971.1-proteinpolypeptide