Cmc08g0215031.1 (mRNA) Melon (Charmono) v1.1

Overview


Name	Cmc08g0215031.1
Type	mRNA
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	vegetative cell wall protein gp1-like
Location	CMiso1.1chr08: 4923517 .. 4924966 (+)
Sequence length	1450
RNA-Seq Expression	Cmc08g0215031.1
Synteny	Cmc08g0215031.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAATGGGATTTTCGCCACGTGTATCCATATTTGACACCCTGGACCAACGTTTTTCAGAAAATTTGCAACACCTCTGGCAAGGAGGTGTAGCGGTACCATACGGAAAGGAACGGACAAGTATGCCCCCACCGACATTCCTCTAACCGACGCGTGGGTGATCCAACGGCTGAAATTTCTCAAATGCAAAACTGCGATTTGATCAGCCTAACGCGTATACGTGCTGGAATCTTAGTAGCTTGCTTACTCGGTCCACATGTATCTGATTCTTGTAGAAGGTTTTTATGAGATGCTAAGGCTATATATATATAGACTTACCACCCGCTACTGAGATACAAAGCAAAACCAGCAAAGTGAATTCTGTGAGCGAATTGTTCCTTTCTAAACCGCATCGTTTGGCTCTTCCACTCTCACTACCTTCTCCGAGGTACTCTGTTTTGAGCAAAACAAATCTTCTTTTCCCTTTTTCTTCCCGATAAAGACGATGGGATTCTCCGGGGTTCGATTCGTTGTGATTTTTGCTTTGTTGACGAGGTTATGTATGGCTCAGGCGCCTGTGCCGGCACCGGGTTCTCCACAGCCTCTAACTCCTCCATCAGCCACACCGGCGCCTTCTCCGGTCGTTCTCCCTCCATCTCCAACTCCAACACCAAACAGAGCACCATCGCCTTCACCGACTCCGGTATCGCCTTCACCCGCTCCGGATGCTCCGTCACCCGCACCAGTGGTACCTGCTCCAGCTCCGGCGCCTATTGCTCCTACCCCAACTCCAATCTCTACTCCTACTCCTTCCGGTGGTCCTGTTGTTCCACCCATTGCTTCTCCTCCTTCACCCACCGGAATCGAGGTGCCTTCACCAGCACCCCAAGGCCCGCCGGCCGATAACCCAGCTGGAGCGGCGTCGCACATCGGCGGAGCAGCGACGTTGGGGATCGCTTTGGCTGGTACTCTGTTTGCCGTGATTTTATCGTAGACGTTGATGCGTTGGGTCAACTTAGAGATCTAAATTTGGAGGTGAATTGGAGTGATGGCTGAAGTAATTCTTTTGCTTTTTTTGTTTTTTGAAAAAAAATCTCTTTCCTACACTACTACTGCCTTCACATAATTTCATTGTTATTATTATTATTTTGATGTTTCAGATTTTAGGGAGTTGGGTTTTGTAATTTCGATAGGTTTGGTTACTTTTTAGTATTCATTGTTCTTCTGTTGATTATATTTGAATTCTTTGTAGATCGGATCAGTGATGAATAAGAGTTTTTTCTTTTCTTATATATGTTTGAAATCTTAGTCTCTTTGTTCAGTGTGGTTGTAAAGAGAAGTGAATTATAAGATACGTTTTCAATCGATTTCTTCTTCAGGAGTTGAAATTAAACTTTACTAAAGAAGAGAGCAAGATCTTTAAGTCTTCATCAATAGAACTATAGAAGAACGATTAGGGAATTAAACCACATTA

mRNA sequence

GAATGGGATTTTCGCCACGTGTATCCATATTTGACACCCTGGACCAACGTTTTTCAGAAAATTTGCAACACCTCTGGCAAGGAGGTGTAGCGGTACCATACGGAAAGGAACGGACAAGTATGCCCCCACCGACATTCCTCTAACCGACGCGTGGGTGATCCAACGGCTGAAATTTCTCAAATGCAAAACTGCGATTTGATCAGCCTAACGCGTATACGTGCTGGAATCTTAGTAGCTTGCTTACTCGGTCCACATGTATCTGATTCTTGTAGAAGGTTTTTATGAGATGCTAAGGCTATATATATATAGACTTACCACCCGCTACTGAGATACAAAGCAAAACCAGCAAAGTGAATTCTGTGAGCGAATTGTTCCTTTCTAAACCGCATCGTTTGGCTCTTCCACTCTCACTACCTTCTCCGAGGTACTCTGTTTTGAGCAAAACAAATCTTCTTTTCCCTTTTTCTTCCCGATAAAGACGATGGGATTCTCCGGGGTTCGATTCGTTGTGATTTTTGCTTTGTTGACGAGGTTATGTATGGCTCAGGCGCCTGTGCCGGCACCGGGTTCTCCACAGCCTCTAACTCCTCCATCAGCCACACCGGCGCCTTCTCCGGTCGTTCTCCCTCCATCTCCAACTCCAACACCAAACAGAGCACCATCGCCTTCACCGACTCCGGTATCGCCTTCACCCGCTCCGGATGCTCCGTCACCCGCACCAGTGGTACCTGCTCCAGCTCCGGCGCCTATTGCTCCTACCCCAACTCCAATCTCTACTCCTACTCCTTCCGGTGGTCCTGTTGTTCCACCCATTGCTTCTCCTCCTTCACCCACCGGAATCGAGGTGCCTTCACCAGCACCCCAAGGCCCGCCGGCCGATAACCCAGCTGGAGCGGCGTCGCACATCGGCGGAGCAGCGACGTTGGGGATCGCTTTGGCTGGTACTCTGTTTGCCGTGATTTTATCGTAGACGTTGATGCGTTGGGTCAACTTAGAGATCTAAATTTGGAGGTGAATTGGAGTGATGGCTGAAGTAATTCTTTTGCTTTTTTTGTTTTTTGAAAAAAAATCTCTTTCCTACACTACTACTGCCTTCACATAATTTCATTGTTATTATTATTATTTTGATGTTTCAGATTTTAGGGAGTTGGGTTTTGTAATTTCGATAGGTTTGGTTACTTTTTAGTATTCATTGTTCTTCTGTTGATTATATTTGAATTCTTTGTAGATCGGATCAGTGATGAATAAGAGTTTTTTCTTTTCTTATATATGTTTGAAATCTTAGTCTCTTTGTTCAGTGTGGTTGTAAAGAGAAGTGAATTATAAGATACGTTTTCAATCGATTTCTTCTTCAGGAGTTGAAATTAAACTTTACTAAAGAAGAGAGCAAGATCTTTAAGTCTTCATCAATAGAACTATAGAAGAACGATTAGGGAATTAAACCACATTA

Coding sequence (CDS)

ATGGGATTCTCCGGGGTTCGATTCGTTGTGATTTTTGCTTTGTTGACGAGGTTATGTATGGCTCAGGCGCCTGTGCCGGCACCGGGTTCTCCACAGCCTCTAACTCCTCCATCAGCCACACCGGCGCCTTCTCCGGTCGTTCTCCCTCCATCTCCAACTCCAACACCAAACAGAGCACCATCGCCTTCACCGACTCCGGTATCGCCTTCACCCGCTCCGGATGCTCCGTCACCCGCACCAGTGGTACCTGCTCCAGCTCCGGCGCCTATTGCTCCTACCCCAACTCCAATCTCTACTCCTACTCCTTCCGGTGGTCCTGTTGTTCCACCCATTGCTTCTCCTCCTTCACCCACCGGAATCGAGGTGCCTTCACCAGCACCCCAAGGCCCGCCGGCCGATAACCCAGCTGGAGCGGCGTCGCACATCGGCGGAGCAGCGACGTTGGGGATCGCTTTGGCTGGTACTCTGTTTGCCGTGATTTTATCGTAG

Protein sequence

MGFSGVRFVVIFALLTRLCMAQAPVPAPGSPQPLTPPSATPAPSPVVLPPSPTPTPNRAPSPSPTPVSPSPAPDAPSPAPVVPAPAPAPIAPTPTPISTPTPSGGPVVPPIASPPSPTGIEVPSPAPQGPPADNPAGAASHIGGAATLGIALAGTLFAVILS

Homology

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BLAST of Cmc08g0215031.1 vs. NCBI nr
Match: KAA0036330.1 (hypothetical protein E6C27_scaffold18G001290 [Cucumis melo var. makuwa] >TYK12724.1 hypothetical protein E5676_scaffold255G003120 [Cucumis melo var. makuwa])

HSP 1 Score: 274.2 bits (700), Expect = 7.0e-70
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0


Query: 1   MGFSGVRFVVIFALLTRLCMAQAPVPAPGSPQPLTPPSATPAPSPVVLPPSPTPTPNRAP 60
           MGFSGVRFVVIFALLTRLCMAQAPVPAPGSPQPLTPPSATPAPSPVVLPPSPTPTPNRAP
Sbjct: 1   MGFSGVRFVVIFALLTRLCMAQAPVPAPGSPQPLTPPSATPAPSPVVLPPSPTPTPNRAP 60

Query: 61  SPSPTPVSPSPAPDAPSPAPVVPAPAPAPIAPTPTPISTPTPSGGPVVPPIASPPSPTGI 120
           SPSPTPVSPSPAPDAPSPAPVVPAPAPAPIAPTPTPISTPTPSGGPVVPPIASPPSPTGI
Sbjct: 61  SPSPTPVSPSPAPDAPSPAPVVPAPAPAPIAPTPTPISTPTPSGGPVVPPIASPPSPTGI 120

Query: 121 EVPSPAPQGPPADNPAGAASHIGGAATLGIALAGTLFAVILS 163
           EVPSPAPQGPPADNPAGAASHIGGAATLGIALAGTLFAVILS
Sbjct: 121 EVPSPAPQGPPADNPAGAASHIGGAATLGIALAGTLFAVILS 162

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BLAST of Cmc08g0215031.1 vs. NCBI nr
Match: XP_038881138.1 (vegetative cell wall protein gp1-like [Benincasa hispida])

HSP 1 Score: 213.0 bits (541), Expect = 1.9e-51
Identity = 136/162 (83.95%), Postives = 141/162 (87.04%), Query Frame = 0


Query: 1   MGFSGVRFVVIFALLTRLCMAQAPVPAPGSPQPLTPPSATPAPSPVVLPPSPTPTPNRAP 60
           MGFSGVR+VVIFALLTRLCMAQAP PAPGS QPL P   TPAPSPVV PPSPTPTPNRAP
Sbjct: 1   MGFSGVRYVVIFALLTRLCMAQAPAPAPGSSQPLPPLPTTPAPSPVVFPPSPTPTPNRAP 60

Query: 61  SPSPTPVSPSPAPDAPSPAPVVPAPAPAPIAPTPTPISTPTPSGGPVVPPIASPPSPTGI 120
           S SP P SPSPAP+APSPAP VPAPAPA  APTP P S+ TPSGGPVVPPIASPPSPTGI
Sbjct: 61  SLSPAPASPSPAPEAPSPAPAVPAPAPATTAPTPAPSSSLTPSGGPVVPPIASPPSPTGI 120

Query: 121 EVPSPAPQGPPADNPAGAASHIGGAATLGIALAGTLFAVILS 163
           EVPS APQ P ADNPAGAASHIGGAA  GIA+AGTLFAVIL+
Sbjct: 121 EVPSSAPQAPAADNPAGAASHIGGAA-FGIAVAGTLFAVILA 161

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BLAST of Cmc08g0215031.1 vs. NCBI nr
Match: XP_022978568.1 (vegetative cell wall protein gp1-like [Cucurbita maxima])

HSP 1 Score: 151.0 bits (380), Expect = 8.9e-33
Identity = 111/175 (63.43%), Postives = 127/175 (72.57%), Query Frame = 0


Query: 1   MGFSGVRFVVIFALLTRLCMAQAPVPAPGSPQPLTPPSATPAPSPVVLPPSPTPTPNRAP 60
           MGFSGVR VVIFAL+  LC AQAP PA  SP+P+ P  ATPAPSPV  PPSP+ +P RAP
Sbjct: 1   MGFSGVRLVVIFALMA-LCTAQAPAPAHDSPKPMPPTPATPAPSPVAFPPSPSRSPIRAP 60

Query: 61  SPSPTPVSPSPAPDAPSPAP---------VVPAPAPAPIAPTPTPISTPTPS----GGPV 120
           SPSPT  SPSPA +APSPAP           P P+PA  APTP P S P PS    G PV
Sbjct: 61  SPSPTSASPSPATEAPSPAPSAHAPAPETKAPTPSPATSAPTPAPSSRPIPSGSPAGAPV 120

Query: 121 VPPIASPPSPTGIEVPSPAPQGPPADNPAGAASHIGGAATLGIALAGTLFAVILS 163
           VPPIASPPSP+  + PSP P+ P AD+PAGAASHIGGA TLGIA+AGTL A++++
Sbjct: 121 VPPIASPPSPS-TDGPSPMPEAPAADSPAGAASHIGGATTLGIAIAGTLLAMVVA 173

[Close]

BLAST of Cmc08g0215031.1 vs. NCBI nr
Match: XP_023544207.1 (vegetative cell wall protein gp1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 149.8 bits (377), Expect = 2.0e-32
Identity = 112/179 (62.57%), Postives = 128/179 (71.51%), Query Frame = 0


Query: 1   MGFSGVRFVVIFALLTRLCMAQAPVPAPG----SPQPLTPPSATPAPSPVVLPPSPTPTP 60
           MGFSGVR VVIFAL+  LCMAQAP P P     SP+P+ P  ATPAPSPV  PP+P+ +P
Sbjct: 1   MGFSGVRLVVIFALMA-LCMAQAPAPTPAPAHDSPKPMPPTPATPAPSPVAFPPAPSRSP 60

Query: 61  NRAPSPSPTPVSPSPAPDAPSPAP---------VVPAPAPAPIAPTPTPISTPTPS---- 120
            RAPSPSPT  SPSPA +APSPAP           P P+PA  APTP P S P PS    
Sbjct: 61  IRAPSPSPTSASPSPATEAPSPAPSAHAPAPETKAPTPSPATSAPTPAPSSRPIPSGSPA 120

Query: 121 GGPVVPPIASPPSPTGIEVPSPAPQGPPADNPAGAASHIGGAATLGIALAGTLFAVILS 163
           G PVVPPIASPPSP+  E PSP P+ P AD+PAGAASHIGGA TLGIA+AGTL A++++
Sbjct: 121 GAPVVPPIASPPSPS-TEGPSPMPEAPAADSPAGAASHIGGATTLGIAIAGTLLAMVVA 177

[Close]

BLAST of Cmc08g0215031.1 vs. NCBI nr
Match: XP_022950235.1 (vegetative cell wall protein gp1-like [Cucurbita moschata])

HSP 1 Score: 144.8 bits (364), Expect = 6.4e-31
Identity = 110/179 (61.45%), Postives = 126/179 (70.39%), Query Frame = 0


Query: 1   MGFSGVRFVVIFALLTRLCMAQAPVPAPG----SPQPLTPPSATPAPSPVVLPPSPTPTP 60
           MG SGVR VVIFAL+  LC AQAP P P     SP+P+ P  ATPAPSPV  PPSP+ +P
Sbjct: 1   MGSSGVRLVVIFALMA-LCTAQAPAPTPAPAHDSPKPMPPTPATPAPSPVAFPPSPSRSP 60

Query: 61  NRAPSPSPTPVSPSPAPDAPSPAP---------VVPAPAPAPIAPTPTPISTPTPS---- 120
            RAPSPSPT  SPSPA +APSPAP           P P+PA  APTP P S P PS    
Sbjct: 61  IRAPSPSPTSASPSPATEAPSPAPSAHAPAPETKAPTPSPATSAPTPAPSSRPVPSGSPA 120

Query: 121 GGPVVPPIASPPSPTGIEVPSPAPQGPPADNPAGAASHIGGAATLGIALAGTLFAVILS 163
           G PVVPPIASPPSP+  + PSP P+ P AD+PAGAASHIGGA TLGIA+AGTL A++++
Sbjct: 121 GAPVVPPIASPPSPS-TDGPSPMPEAPAADSPAGAASHIGGATTLGIAIAGTLLAMVVA 177

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BLAST of Cmc08g0215031.1 vs. ExPASy Swiss-Prot
Match: Q9FPQ6 (Vegetative cell wall protein gp1 OS=Chlamydomonas reinhardtii OX=3055 GN=GP1 PE=1 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 1.6e-05
Identity = 66/126 (52.38%), Postives = 75/126 (59.52%), Query Frame = 0


Query: 24  PVPAPGSPQPLTPPS-ATPAPSPVVLPPSPTPTPNRAP--SPSPTPVSPSPAPDAPSPAP 83
           P PAP SP P +PPS A P+PSP   PPSP+P P+ AP   PSP P SPSP P  PSP+P
Sbjct: 109 PSPAPPSPAPPSPPSPAPPSPSPPA-PPSPSP-PSPAPPLPPSPAPPSPSP-PVPPSPSP 168

Query: 84  VVPAPAPAPIAPT------PTPISTPTPSGGPVVPPIASPPSPTGIEVPSPAPQGPPADN 141
            VP P+PAP +PT      P P S   PS  P VPP  +PPSP     PSPAP  PP+  
Sbjct: 169 PVP-PSPAPPSPTPPSPSPPVPPSPAPPSPAPPVPPSPAPPSPAPPVPPSPAPPSPPSPA 228

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BLAST of Cmc08g0215031.1 vs. ExPASy Swiss-Prot
Match: O10341 (Uncharacterized 29.3 kDa protein OS=Orgyia pseudotsugata multicapsid polyhedrosis virus OX=262177 GN=ORF92 PE=4 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 6.3e-05
Identity = 56/118 (47.46%), Postives = 74/118 (62.71%), Query Frame = 0


Query: 23  APVPAPGSPQPLTPPSATPAPSPV-VLPPSPTPTPNRAPSPSPTPV-SPSPAPDAPSPAP 82
           +P P P +P P   P+ TP+P+P   L P+PTP+P  +P+PSPTP  SP+P+P  PSP P
Sbjct: 52  SPTPTP-TPTPTPTPTPTPSPTPTPALSPTPTPSPTLSPTPSPTPTPSPTPSP-TPSPTP 111

Query: 83  VVPAPAPAPI-APTPTPISTPTPSGGPVVPPIASP-PSPTGIEVPSPAPQGPPADNPA 137
             P+P P+P   P+PTP  TPTPS  P   P  SP PSPT    P+P+P   P+  P+
Sbjct: 112 -TPSPTPSPTPTPSPTPSPTPTPSPTPTPSPTPSPTPSPTPTPSPTPSPTPTPSPTPS 166

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BLAST of Cmc08g0215031.1 vs. ExPASy Swiss-Prot
Match: Q9FM99 (Alpha carbonic anhydrase 8 OS=Arabidopsis thaliana OX=3702 GN=ACA8 PE=3 SV=3)

HSP 1 Score: 46.2 bits (108), Expect = 4.1e-04
Identity = 54/137 (39.42%), Postives = 71/137 (51.82%), Query Frame = 0


Query: 1   MGFSGVRFVVIFALLTRLCMAQAPVPAPGSPQPLTPPSATPAPSPVVLPPSPTPTPNR-A 60
           M  S + +V++   ++   ++ AP P P  P+P       PAP+P    P+P PTP +  
Sbjct: 1   MKISSLGWVLVLIFISITIVSSAPAPKPPKPKP------APAPTPPKPKPTPAPTPPKPK 60

Query: 61  PSPSPTPVSPSPAPDAPSPAPVVPAPAPAPIAPTPTPISTPTPSGGPVVPPIASPPSPTG 120
           P P+PTP  P PAP AP+P    PAPAP P  P P P  TP P+  P   P    P P  
Sbjct: 61  PKPAPTPPKPKPAP-APTPPKPKPAPAPTPPKPKPKPAPTP-PNPKPTPAPTPPKPKPAP 120

Query: 121 IEVPSPAPQGPPADNPA 137
              P+PAP+  PA  PA
Sbjct: 121 APAPTPAPKPKPAPKPA 129

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BLAST of Cmc08g0215031.1 vs. ExPASy TrEMBL
Match: A0A5D3CNQ6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G003120 PE=4 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 3.4e-70
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0


Query: 1   MGFSGVRFVVIFALLTRLCMAQAPVPAPGSPQPLTPPSATPAPSPVVLPPSPTPTPNRAP 60
           MGFSGVRFVVIFALLTRLCMAQAPVPAPGSPQPLTPPSATPAPSPVVLPPSPTPTPNRAP
Sbjct: 1   MGFSGVRFVVIFALLTRLCMAQAPVPAPGSPQPLTPPSATPAPSPVVLPPSPTPTPNRAP 60

Query: 61  SPSPTPVSPSPAPDAPSPAPVVPAPAPAPIAPTPTPISTPTPSGGPVVPPIASPPSPTGI 120
           SPSPTPVSPSPAPDAPSPAPVVPAPAPAPIAPTPTPISTPTPSGGPVVPPIASPPSPTGI
Sbjct: 61  SPSPTPVSPSPAPDAPSPAPVVPAPAPAPIAPTPTPISTPTPSGGPVVPPIASPPSPTGI 120

Query: 121 EVPSPAPQGPPADNPAGAASHIGGAATLGIALAGTLFAVILS 163
           EVPSPAPQGPPADNPAGAASHIGGAATLGIALAGTLFAVILS
Sbjct: 121 EVPSPAPQGPPADNPAGAASHIGGAATLGIALAGTLFAVILS 162

[Close]

BLAST of Cmc08g0215031.1 vs. ExPASy TrEMBL
Match: A0A0A0KG74 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G499150 PE=4 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 6.4e-61
Identity = 147/162 (90.74%), Postives = 150/162 (92.59%), Query Frame = 0


Query: 1   MGFSGVRFVVIFALLTRLCMAQAPVPAPGSPQPLTPPSATPAPSPVVLPPSPTPTPNRAP 60
           MGFSGVRFV+IFALLTRLCMAQAP PAPGSPQPLTPPSATPAPSPVVLPPSPTPTPNRAP
Sbjct: 1   MGFSGVRFVLIFALLTRLCMAQAPAPAPGSPQPLTPPSATPAPSPVVLPPSPTPTPNRAP 60

Query: 61  SPSPTPVSPSPAPDAPSPAPVVPAPAPAPIAPTPTPISTPTPSGGPVVPPIASPPSPTGI 120
           SPSPTPVSPSPAPDA S       PAPAPIAPTPTPISTPTPSGGPV+PPIASPPSPTG+
Sbjct: 61  SPSPTPVSPSPAPDAAS-------PAPAPIAPTPTPISTPTPSGGPVLPPIASPPSPTGM 120

Query: 121 EVPSPAPQGPPADNPAGAASHIGGAATLGIALAGTLFAVILS 163
           EVPSPAPQGP ADNPAGA SHIGGAATLGIALAGTLF VILS
Sbjct: 121 EVPSPAPQGPAADNPAGAGSHIGGAATLGIALAGTLFGVILS 155

[Close]

BLAST of Cmc08g0215031.1 vs. ExPASy TrEMBL
Match: A0A6J1ITI1 (vegetative cell wall protein gp1-like OS=Cucurbita maxima OX=3661 GN=LOC111478507 PE=4 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 4.3e-33
Identity = 111/175 (63.43%), Postives = 127/175 (72.57%), Query Frame = 0


Query: 1   MGFSGVRFVVIFALLTRLCMAQAPVPAPGSPQPLTPPSATPAPSPVVLPPSPTPTPNRAP 60
           MGFSGVR VVIFAL+  LC AQAP PA  SP+P+ P  ATPAPSPV  PPSP+ +P RAP
Sbjct: 1   MGFSGVRLVVIFALMA-LCTAQAPAPAHDSPKPMPPTPATPAPSPVAFPPSPSRSPIRAP 60

Query: 61  SPSPTPVSPSPAPDAPSPAP---------VVPAPAPAPIAPTPTPISTPTPS----GGPV 120
           SPSPT  SPSPA +APSPAP           P P+PA  APTP P S P PS    G PV
Sbjct: 61  SPSPTSASPSPATEAPSPAPSAHAPAPETKAPTPSPATSAPTPAPSSRPIPSGSPAGAPV 120

Query: 121 VPPIASPPSPTGIEVPSPAPQGPPADNPAGAASHIGGAATLGIALAGTLFAVILS 163
           VPPIASPPSP+  + PSP P+ P AD+PAGAASHIGGA TLGIA+AGTL A++++
Sbjct: 121 VPPIASPPSPS-TDGPSPMPEAPAADSPAGAASHIGGATTLGIAIAGTLLAMVVA 173

[Close]

BLAST of Cmc08g0215031.1 vs. ExPASy TrEMBL
Match: A0A6J1GF55 (vegetative cell wall protein gp1-like OS=Cucurbita moschata OX=3662 GN=LOC111453383 PE=4 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 3.1e-31
Identity = 110/179 (61.45%), Postives = 126/179 (70.39%), Query Frame = 0


Query: 1   MGFSGVRFVVIFALLTRLCMAQAPVPAPG----SPQPLTPPSATPAPSPVVLPPSPTPTP 60
           MG SGVR VVIFAL+  LC AQAP P P     SP+P+ P  ATPAPSPV  PPSP+ +P
Sbjct: 1   MGSSGVRLVVIFALMA-LCTAQAPAPTPAPAHDSPKPMPPTPATPAPSPVAFPPSPSRSP 60

Query: 61  NRAPSPSPTPVSPSPAPDAPSPAP---------VVPAPAPAPIAPTPTPISTPTPS---- 120
            RAPSPSPT  SPSPA +APSPAP           P P+PA  APTP P S P PS    
Sbjct: 61  IRAPSPSPTSASPSPATEAPSPAPSAHAPAPETKAPTPSPATSAPTPAPSSRPVPSGSPA 120

Query: 121 GGPVVPPIASPPSPTGIEVPSPAPQGPPADNPAGAASHIGGAATLGIALAGTLFAVILS 163
           G PVVPPIASPPSP+  + PSP P+ P AD+PAGAASHIGGA TLGIA+AGTL A++++
Sbjct: 121 GAPVVPPIASPPSPS-TDGPSPMPEAPAADSPAGAASHIGGATTLGIAIAGTLLAMVVA 177

[Close]

BLAST of Cmc08g0215031.1 vs. ExPASy TrEMBL
Match: A0A6J1HFR1 (vegetative cell wall protein gp1-like OS=Cucurbita moschata OX=3662 GN=LOC111463087 PE=4 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 3.7e-16
Identity = 79/162 (48.77%), Postives = 97/162 (59.88%), Query Frame = 0


Query: 1   MGFSGVRFVVIFALLTRLCMAQAPVPAPGSPQPLTPPSATPAPSPVVLPPSPTPTPNRAP 60
           MGFSGVRF+++ ALL   CMAQAP P              PAP+P + P  P P     P
Sbjct: 1   MGFSGVRFIMVLALLAATCMAQAPAP-------------VPAPAPALGPSQPLPPAPATP 60

Query: 61  SPSPTPVSPSPAPDAPSPAPVVPAPAPAPIAPTPTPISTPTPSGGPVVPPIASPPSPTGI 120
           + S TP SP+PAP+         AP PAPI P      + +P+GGPVVP +ASP      
Sbjct: 61  ASSLTPASPTPAPE-------TSAPPPAPITP------SGSPAGGPVVPRVASP------ 120

Query: 121 EVPSPAPQGPPADNPAGAASHIGGAATLGIALAGTLFAVILS 163
             PS AP+GPPAD P GAAS IGGA TLG+A+AG+L AV+L+
Sbjct: 121 --PSSAPEGPPADKPTGAASQIGGAGTLGMAVAGSLLAVMLA 128

[Close]

BLAST of Cmc08g0215031.1 vs. TAIR 10
Match: AT5G56330.1 (alpha carbonic anhydrase 8 )

HSP 1 Score: 46.2 bits (108), Expect = 2.9e-05
Identity = 54/137 (39.42%), Postives = 71/137 (51.82%), Query Frame = 0


Query: 1   MGFSGVRFVVIFALLTRLCMAQAPVPAPGSPQPLTPPSATPAPSPVVLPPSPTPTPNR-A 60
           M  S + +V++   ++   ++ AP P P  P+P       PAP+P    P+P PTP +  
Sbjct: 1   MKISSLGWVLVLIFISITIVSSAPAPKPPKPKP------APAPTPPKPKPTPAPTPPKPK 60

Query: 61  PSPSPTPVSPSPAPDAPSPAPVVPAPAPAPIAPTPTPISTPTPSGGPVVPPIASPPSPTG 120
           P P+PTP  P PAP AP+P    PAPAP P  P P P  TP P+  P   P    P P  
Sbjct: 61  PKPAPTPPKPKPAP-APTPPKPKPAPAPTPPKPKPKPAPTP-PNPKPTPAPTPPKPKPAP 120

Query: 121 IEVPSPAPQGPPADNPA 137
              P+PAP+  PA  PA
Sbjct: 121 APAPTPAPKPKPAPKPA 129

The following BLAST results are available for this feature:

BLAST of Cmc08g0215031.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0036330.1	7.0e-70	100.00	hypothetical protein E6C27_scaffold18G001290 [Cucumis melo var. makuwa] >TYK1272...	[more]
XP_038881138.1	1.9e-51	83.95	vegetative cell wall protein gp1-like [Benincasa hispida]	[more]
XP_022978568.1	8.9e-33	63.43	vegetative cell wall protein gp1-like [Cucurbita maxima]	[more]
XP_023544207.1	2.0e-32	62.57	vegetative cell wall protein gp1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022950235.1	6.4e-31	61.45	vegetative cell wall protein gp1-like [Cucurbita moschata]	[more]

BLAST of Cmc08g0215031.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FPQ6	1.6e-05	52.38	Vegetative cell wall protein gp1 OS=Chlamydomonas reinhardtii OX=3055 GN=GP1 PE=...	[more]
O10341	6.3e-05	47.46	Uncharacterized 29.3 kDa protein OS=Orgyia pseudotsugata multicapsid polyhedrosi...	[more]
Q9FM99	4.1e-04	39.42	Alpha carbonic anhydrase 8 OS=Arabidopsis thaliana OX=3702 GN=ACA8 PE=3 SV=3	[more]

BLAST of Cmc08g0215031.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CNQ6	3.4e-70	100.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0KG74	6.4e-61	90.74	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G499150 PE=4 SV=1	[more]
A0A6J1ITI1	4.3e-33	63.43	vegetative cell wall protein gp1-like OS=Cucurbita maxima OX=3661 GN=LOC11147850...	[more]
A0A6J1GF55	3.1e-31	61.45	vegetative cell wall protein gp1-like OS=Cucurbita moschata OX=3662 GN=LOC111453...	[more]
A0A6J1HFR1	3.7e-16	48.77	vegetative cell wall protein gp1-like OS=Cucurbita moschata OX=3662 GN=LOC111463...	[more]

BLAST of Cmc08g0215031.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G56330.1	2.9e-05	39.42	alpha carbonic anhydrase 8	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR01217	PRICHEXTENSN	coord: 24..36 score: 36.92 coord: 60..76 score: 44.71 coord: 38..59 score: 36.36 coord: 77..94 score: 38.89
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 26..132
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 26..141
None	No IPR available	PANTHER	PTHR36321:SF6	CLASSICAL ARABINOGALACTAN PROTEIN 2	coord: 1..87
None	No IPR available	PANTHER	PTHR36321:SF6	CLASSICAL ARABINOGALACTAN PROTEIN 2	coord: 69..161
IPR044959	Classical arabinogalactan protein	PANTHER	PTHR36321	CLASSICAL ARABINOGALACTAN PROTEIN 9	coord: 1..87
IPR044959	Classical arabinogalactan protein	PANTHER	PTHR36321	CLASSICAL ARABINOGALACTAN PROTEIN 9	coord: 69..161

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cmc08g0215031	Cmc08g0215031	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc08g0215031.1-exon	Cmc08g0215031.1-exon-CMiso1.1chr08:4923517..4924966	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc08g0215031.1-five_prime_utr	Cmc08g0215031.1-five_prime_utr-CMiso1.1chr08:4923517..4923997	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc08g0215031.1-cds	Cmc08g0215031.1-cds-CMiso1.1chr08:4923998..4924486	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc08g0215031.1-three_prime_utr	Cmc08g0215031.1-three_prime_utr-CMiso1.1chr08:4924487..4924966	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cmc08g0215031.1	Cmc08g0215031.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005886	plasma membrane