Cmc07g0199701.1 (mRNA) Melon (Charmono) v1.1

Overview


Name	Cmc07g0199701.1
Type	mRNA
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	GATA transcription factor 18-like
Location	CMiso1.1chr07: 22510147 .. 22516584 (-)
Sequence length	1431
RNA-Seq Expression	Cmc07g0199701.1
Synteny	Cmc07g0199701.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTATCTCTTCAAATCTTCCAACAAAACTCTCCACTTTTATTTTCCATATTCTTCTTCTTCTTCTTCTTATTCTTCCAATCCAAACACCTTTTTTAATTTCTCTTTTTCTTGTTTATTTTTTCCAAACTCAGTCAAAGCAACAAAAACAAAGCCCCACTCAACCAATAACCCTCCATTGAAGAAGCTTAAAGTGAGGAAAAAAAGTTCATAAAACAGCCAACCTAGACTGAGATAGAGACAGATATTCCATAAAGGTTCTGATTTTATATATTATACTAGGTATTAAAGTTTATTTCAATTCTCTTATTATTATACCCCCCACCTATACATATATTTTATTATATATATAGTAAGAAGATCTCATGTTGAATAGAAAGCTGGTTTTGGTCTCTTCTACTAGATTCACTTCATTCTACACTTTTTTCTTGTAGTTCAAATTGTCGTGGGGTCGTATCAAATTATGAAGCTTTTGAGTTGTAATTGATGTCTTATCTACTAAATTATGTATATATATTTACCATTTTATTTTACAATTTCGATAAATGTTAATTAAAATTACAAATTTATTTCATTTTTTTATGATATAAAAATTTACATACCTACCAAATTAAATTTGATCAATAAATTATTAGATGAAAAATGAAAAGTTGAAAACAAAATATTTTTAAAATTTTAGAGACCGAATAAATACAAACTTTTAATGGTTTGATATCAAGAAAAAGAGAATTCATATATTAACTAGAGAGCTTTTCTTTTTTCTCCCTTTTCTTTATATTCAAACCGCCAATTCAAACTCTAAGAACAAATCTCTTTGACGAGTAAACAACTTTCAAACCTCTCCCCATCTAAATAGAATAGTGAACTTTAAAACATTTAAAGTATTTACTCCATTAGTTTAAATTTACATTTTAATTTTTCTTTTATTCTGAAAGACATCCAAAGTTGAAATCTCATCTAATTTTCTAAAACAAATTATGATCTTTTATTTTTAATTTTTTAAAAAATTAAACCTACAAACACTTGTGTCACCTCTAAATTTCTTATTTATCTATTTTTAATCAATATATAGTAAATAAAATTGAGTCAAATTTTAAAAACTAAAAAAATAACAATAATATTATGAAAACGAACAATTATTAAATTAGAAATAAAAACTTAATACGCCATTTTTCTTATAAAAAAAAAAAGAGAAGAAGAAGAAGAAGAAGAAGAGAAGGCATAATAAGATGATATAAAATAGTTAAAATGAAGAATAAATATTTGTAGGTAGGAGAGAGAAAGAAGAGGGAGAGAGACAGACATTCCAGTTGTATGTTTATTCTTTTGAGGAAAGAAAGTTATAGTTTTGACATAAATATTTGTGTAACTTGTCGTCGTTTAATTAATCAATATTCTTTTTTCTTTTTTTTTCTTTCTTTTTTTTTTGTAATTAAAGAGAAAAAAAAAGAAAAAAAAAACGTTTTCTTTATATTTATTTTGAGATTTTGGGTTCTTTCTTTCTTTTTGGGGGACTTAGAAGAAGTTATTGGTTATTATTACACAAATTGCATGCATGCATGCAAAGCAATTACATTTTCTAAAATTAAAATTCCCCATCTATTCTCTCCCACGTGGCACCCTCCACTCCTGGATAAGATCTTCCCTATATTATTGCATTCCAACAAAACTCTTATTTTATTCAAAACCAAATTTATATCTCTTTTTTGCCCTCTATGGGTCCCACCGAATCCAACGACCTACATAACATCATCATTATCATCAATATACTGTGACAGAAAATAACATTTTAATGTAATTATTCTTTTCAAAATTTTAATTTTAGTTTGGTTAATCGCAAAAAGATTAAAAAAAAAAAAACCTCTAAATATGGTTTTCAATGACAAAAATTGAGTTTTAAAAATGTTAAAATTTAACGGTTAAGTTTTCAATAATGGAAAATTTTGAAGAAATGTTTTTAAATATGATAAAATAAAATAAACTATAATATTTACGACATAACACAAAATTTTGGATTTTATGAATGATAGACATCGATAGATTTTCATTACTATTTGACTGATAGAAACATATTAAAGTTTAATAATATCTATTATTAATATAATTTAAAATTTTGCTATATTTTGTTAAATTTATCAATTTTGACAAGTCTAAAAAATTAAACTTACAAATAATAAAAATTGAAATTTCGAATCAATTTAAATTCAATGTCTAATTTTAAATTTAGGAAAAGTTTTAAGGACTCAATTTTTAGTTTTGAAGGTTTAAGAATATAATTACAATTGTCACCGTTGTATAGTTCAAATTCATTCAAAATTAACTTAATATATAATTTTACAATTTTAGATGCTATTTTCATGATCAAAATTAGCTTTGAATAATTAAAAACATGTCATATAAATGTTAAGAGGAACAAACATGATTTTAACTAATTTAAAAATCACTAGTATACATACATTTCAAGCTTTATCGTTTTGGTCAATTTGAACCCTAATTCATTGTTTTTAAACACAACCATTTTTTGTCTTCTAAAAATGGAAATGAAGGAAGCAAGATGATATTTTTAAGAAAGTATAGCAACAAAAATATACATTTAGATGGTACACAATGAGTAAGATAAAAAGTAAAAGAAAAGGAGAAAAGATTGGATAGATAGATATAGAGAGGTATAGAGTATTTATAAGCAAAATCTCATAGTTTGATGAGAAATGTCTTAAAAACAGCACAAAATCCGATTTTTTTTTTTTTTTTTTTTTTTTTTTGGTTATTGAGAACACAGCCCTAAAAAAATTCACAATTTACAAAAGAGTCTCACGTGGAATGAGGCAGTAACAAGCAACAACTAGCAAAACAATCGAGAATTACGAGAACAATAATAATAGTAAATACGTTTGCATGTGGTGTGTGGATCAAAACAAAATTCACTATTTTGGTTCTTGCGTTTTAAATTAATTCAATATTAATATTATTGATTGAATTAAACAAGATTAATATAATAATAAAATGACTAAAATTGTTAGTTTTTAAACATATATAAAGACCACAACATATCTGTCTGTGTATAACATTTTCTAATATACTAAATAGTAATTAAAAAACACACACACACACACACATATATCAGAATTAGACATTTCAGAGACTAAATATAAATATATATGTAAATGTAGAGAGAGAGAGAGAGAGAGAGAGAGAGGGACAGGGAAGGTTGAAGAAGGGGAGAGAAAGAAGGCATCTTTTGGAAAGCGGTGGTCGTCGAACTCTGTCTCATTCATCAATCTCCAGACGATCCGATTCTCTCAATTGCCTTACCAACAATTTTTTTGGTCATCAAATTAAATCATTCATGTGGGGTCACTTCCATGTTTTATTTTTCTTTTATATTCTTATTATAGTAATTTAGGTATGAAAAGGTTCAAGTGTTGAATCATGTTCTTAATTTTGTCATCATACCCAACACACAAACAAAAAATAATCCTATTGTTTAATTATATTCCACCTTATGATCATTATACCCAACAATTTTGGGTCTCTCACTTTTTAGTTTTCGGGTTCACCTCATCATTTCAAAAACACAAAAATTAATTTAATATCTTATTGATTTAGAGAATATTTTTCCAATTATTTCCATTTTTCCTCCCCTAATGAAGTGATTATATGGGAACATTTAGAGATTGGTTGTTTTTGTCACTCTCAAACACTTATCCCTCTTGTCTTCTTCTTATACTATCATATGTTTTTATAGATATTTTGATTTATTTTGTTAAAAGGGTAAGAAGATAAGTTATCAAATAAGATGGGGGTGTGTTTTTAGGGAAAAAGAAATAGAAATGGGGGAAGTAATTCCATATTAGTTGGGAGAGAGAAAATGGAGGGATACGGAGAGAGAGGGTGTAATACAAAGGCCTCGTGATCGGAGAAGGCAGATCCATGGAAGACTGTTCCCCTTAGTCACGTGGACTCCTTTGACTAACACAATTACCAATATCTCCCCCTCTCACAATCACTCCTCCTTTTCTTTTTTTCTTTTTTCTTTTTTCTTTTTTCTTTTTTCTTTTTTTGTCCGTATAACAAAATGAAAATTAACTCCATTTTTATATCCATGTATTTTGGATTTTCTTTTGTTTCTGTTTTACTATTTTTAAATACTTAAATTTGGTTTGTTGTTCTTTTTTTTCTTTCTTTTAATTAATTAATAAATTTTGGCAATATTGAAAAATAATAAATATGAACAATAAGGTGGTGGGATGGATTGATCTACCAAAAATACATTTTAATTTATATATAATGAAATTCTACTCTTGAATTTTATTATTGATAAATGACAATAAGTGATTAGTTAAGCATGTATCTAGATTGGTAGCCCTCAATAAGAAATAAATATTTTTTTAAGATAAAAAAGATCCAATTAGAATATATAGCCATCAAATAGACAAATACTCATGATCTTAAATAATAGAAAGAAATTTAAAAATGTGCAGTGATATTAAATTTGTTTCTACTTATCTTTTGATTTGAAGTTAGAATTACAGACATAAAATCAAACCATTTTATATATATATATATATATTATACCCTACCAAAACATTACGATCACTGACTCGATGACTGAGTTGCGGTCTCTGACTCAGTTTTCTCTCTCTAGAACATGCAAGCTGAAGCTGGGTCCCACTTCCTCCTTTCTCCTCTCTACCTTTTTTTCAATTTATATATTTCCCAACTCACTCTCTATTTCTTCCCCAACTCTTTCTCTCTTCTATTCCCCCCCTCATAAACCTCAATTTTATTCAAAATCATGATGCACCATTACGGCGGCGGAGGAGGAGGTGGCGGCGGCGGCGCCTCTTCTTTTTCCCTCTTCTTATCTGTCCCAAACCACGGCGCCGCCGATATGTATTCTTCTTCCACTAATTACGCCTCTTCCTCTTCCTCTTCCTCTTCCTCTCCTTCTTCTGTTGATTGTACGCTCTCTCTCGGTACTCCTTCCACGCGCTCCTCGGAATTTGACAGTGACAAACGCGCCGCTGCACGTAATCCCCACCGCCGTTCCGCTGGTTCTTACGTCTCTAATTTCTGCTGGGATTTGTTGCATCCTAAGCACAAGACTTCTGGCCGTGGTGCTGGCGGCGCTGCTTCTAATAATAATATAACTGCCGCCGTGAGTAACAGTGGCGATCCGCTTCTTGCTCGGCGTTGCGCTAACTGTGATACAACTTCCACTCCTCTCTGGCGAAATGGGCCCAGAGGCCCAAAGGTAAATCCATATATCAAAATGAACCAATATATTAATAACTATATATTCAAATTATTATATCCACCGTAGACTATTTTTGATTAAACAGTTTTGTTTACTTATTAGTTTCGTGCATGGAAGATCTTATTATTACTTTCTTTTTAATAAATAGATTTAAACCTATTAAAAAAAAAAAAGAAGTGATTTCCATCTCAAAAGTAATCAATAATGTGATGGCGAGATCTCTATTTCTTTTTCCATACTAGATTTTCAAAGTAATTTTAGAGTATTTTTTTGAACGAACATATTTAATCACTCTGTTAATTTAATATTTAATTTTACGTTTTTAAAACTAGTTTTTATATTTTGAATCGTTTCACTCCCAAAGCAGACTTTTAGACTCGCTTAAATTTAGTGTTGTCATGTCTAATATCACTCTAAACCATTATTTGTAATCTTTTTAATATCAAATGGGTTAATATCAATGTTGTATTGATCAATATTAAGGTGATTTTGAAACTTATTACACTTTTTTTTAAATTAAATATATTGATTACCACATTGGAATCAGATATTTGAATCTTGAGTAGATTTATTATCAATGTTTCCCTCCTCTTGGAAAGGAACAAATAATTCATTGTTTGTGAATGAATTTTGGAGTACAGTCGCTCTGTAATGCTTGTGGGATTCGATTCAAAAAGGAAGAGCGGAGAGCGGCGGCGGCGACGGTGAACAGCTCGACGGCAGAATCAAACCACCACCACCACTCAATGTTCAACGGAAGTTATACAAATTCAAGTACGTGGGTTCCACAGCAGTTGCCGGCGACAACTCAGAAACATCCTTGCCTGTCGGCAGCCATTGGAAACGACGACGTTGGACCGGAAAATGGGATTTCGTTTCTGTCTTGGCGGCTTAACGTTGCTAATACAGATCACCGGCCCACCCTCGTCCATGATTTCACAAGATGAGTCAACAAAAAAAAAGAAAAAAAGTACAAATTAGAAAATTAGAAAAAAAAAAATCAATTGAGCAGGTTTTTATATATTTTTTATATAAAAAAAAATTTATAGTACGAATTTCTACTGCGAAGATTAAAAAGCTGAGTCCTTTTTCTCCATCATTTGATGGGATGGAGTGGAATTAAGCTGAGGATAATCAATTATATTTTAACTTTAGCTAAAATATTTTTGTTTTTTCAGTTACAT

mRNA sequence

TTATCTCTTCAAATCTTCCAACAAAACTCTCCACTTTTATTTTCCATATTCTTCTTCTTCTTCTTCTTATTCTTCCAATCCAAACACCTTTTTTAATTTCTCTTTTTCTTGTTTATTTTTTCCAAACTCAGTCAAAGCAACAAAAACAAAGCCCCACTCAACCAATAACCCTCCATTGAAGAAGCTTAAAGTGAGGAAAAAAAGTTCATAAAACAGCCAACCTAGACTGAGATAGAGACAGATATTCCATAAAGGTTCTGATTTTATATATTATACTAGAACATGCAAGCTGAAGCTGGGTCCCACTTCCTCCTTTCTCCTCTCTACCTTTTTTTCAATTTATATATTTCCCAACTCACTCTCTATTTCTTCCCCAACTCTTTCTCTCTTCTATTCCCCCCCTCATAAACCTCAATTTTATTCAAAATCATGATGCACCATTACGGCGGCGGAGGAGGAGGTGGCGGCGGCGGCGCCTCTTCTTTTTCCCTCTTCTTATCTGTCCCAAACCACGGCGCCGCCGATATGTATTCTTCTTCCACTAATTACGCCTCTTCCTCTTCCTCTTCCTCTTCCTCTCCTTCTTCTGTTGATTGTACGCTCTCTCTCGGTACTCCTTCCACGCGCTCCTCGGAATTTGACAGTGACAAACGCGCCGCTGCACGTAATCCCCACCGCCGTTCCGCTGGTTCTTACGTCTCTAATTTCTGCTGGGATTTGTTGCATCCTAAGCACAAGACTTCTGGCCGTGGTGCTGGCGGCGCTGCTTCTAATAATAATATAACTGCCGCCGTGAGTAACAGTGGCGATCCGCTTCTTGCTCGGCGTTGCGCTAACTGTGATACAACTTCCACTCCTCTCTGGCGAAATGGGCCCAGAGGCCCAAAGTCGCTCTGTAATGCTTGTGGGATTCGATTCAAAAAGGAAGAGCGGAGAGCGGCGGCGGCGACGGTGAACAGCTCGACGGCAGAATCAAACCACCACCACCACTCAATGTTCAACGGAAGTTATACAAATTCAAGTACGTGGGTTCCACAGCAGTTGCCGGCGACAACTCAGAAACATCCTTGCCTGTCGGCAGCCATTGGAAACGACGACGTTGGACCGGAAAATGGGATTTCGTTTCTGTCTTGGCGGCTTAACGTTGCTAATACAGATCACCGGCCCACCCTCGTCCATGATTTCACAAGATGAGTCAACAAAAAAAAAGAAAAAAAGTACAAATTAGAAAATTAGAAAAAAAAAAATCAATTGAGCAGGTTTTTATATATTTTTTATATAAAAAAAAATTTATAGTACGAATTTCTACTGCGAAGATTAAAAAGCTGAGTCCTTTTTCTCCATCATTTGATGGGATGGAGTGGAATTAAGCTGAGGATAATCAATTATATTTTAACTTTAGCTAAAATATTTTTGTTTTTTCAGTTACAT

Coding sequence (CDS)

ATGATGCACCATTACGGCGGCGGAGGAGGAGGTGGCGGCGGCGGCGCCTCTTCTTTTTCCCTCTTCTTATCTGTCCCAAACCACGGCGCCGCCGATATGTATTCTTCTTCCACTAATTACGCCTCTTCCTCTTCCTCTTCCTCTTCCTCTCCTTCTTCTGTTGATTGTACGCTCTCTCTCGGTACTCCTTCCACGCGCTCCTCGGAATTTGACAGTGACAAACGCGCCGCTGCACGTAATCCCCACCGCCGTTCCGCTGGTTCTTACGTCTCTAATTTCTGCTGGGATTTGTTGCATCCTAAGCACAAGACTTCTGGCCGTGGTGCTGGCGGCGCTGCTTCTAATAATAATATAACTGCCGCCGTGAGTAACAGTGGCGATCCGCTTCTTGCTCGGCGTTGCGCTAACTGTGATACAACTTCCACTCCTCTCTGGCGAAATGGGCCCAGAGGCCCAAAGTCGCTCTGTAATGCTTGTGGGATTCGATTCAAAAAGGAAGAGCGGAGAGCGGCGGCGGCGACGGTGAACAGCTCGACGGCAGAATCAAACCACCACCACCACTCAATGTTCAACGGAAGTTATACAAATTCAAGTACGTGGGTTCCACAGCAGTTGCCGGCGACAACTCAGAAACATCCTTGCCTGTCGGCAGCCATTGGAAACGACGACGTTGGACCGGAAAATGGGATTTCGTTTCTGTCTTGGCGGCTTAACGTTGCTAATACAGATCACCGGCCCACCCTCGTCCATGATTTCACAAGATGA

Protein sequence

MMHHYGGGGGGGGGGASSFSLFLSVPNHGAADMYSSSTNYASSSSSSSSSPSSVDCTLSLGTPSTRSSEFDSDKRAAARNPHRRSAGSYVSNFCWDLLHPKHKTSGRGAGGAASNNNITAAVSNSGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAAATVNSSTAESNHHHHSMFNGSYTNSSTWVPQQLPATTQKHPCLSAAIGNDDVGPENGISFLSWRLNVANTDHRPTLVHDFTR

Homology

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BLAST of Cmc07g0199701.1 vs. NCBI nr
Match: XP_008452087.1 (PREDICTED: GATA transcription factor 18-like [Cucumis melo])

HSP 1 Score: 503.1 bits (1294), Expect = 1.5e-138
Identity = 254/254 (100.00%), Postives = 254/254 (100.00%), Query Frame = 0


Query: 1   MMHHYGGGGGGGGGGASSFSLFLSVPNHGAADMYSSSTNYASSSSSSSSSPSSVDCTLSL 60
           MMHHYGGGGGGGGGGASSFSLFLSVPNHGAADMYSSSTNYASSSSSSSSSPSSVDCTLSL
Sbjct: 1   MMHHYGGGGGGGGGGASSFSLFLSVPNHGAADMYSSSTNYASSSSSSSSSPSSVDCTLSL 60

Query: 61  GTPSTRSSEFDSDKRAAARNPHRRSAGSYVSNFCWDLLHPKHKTSGRGAGGAASNNNITA 120
           GTPSTRSSEFDSDKRAAARNPHRRSAGSYVSNFCWDLLHPKHKTSGRGAGGAASNNNITA
Sbjct: 61  GTPSTRSSEFDSDKRAAARNPHRRSAGSYVSNFCWDLLHPKHKTSGRGAGGAASNNNITA 120

Query: 121 AVSNSGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAAATVNSSTA 180
           AVSNSGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAAATVNSSTA
Sbjct: 121 AVSNSGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAAATVNSSTA 180

Query: 181 ESNHHHHSMFNGSYTNSSTWVPQQLPATTQKHPCLSAAIGNDDVGPENGISFLSWRLNVA 240
           ESNHHHHSMFNGSYTNSSTWVPQQLPATTQKHPCLSAAIGNDDVGPENGISFLSWRLNVA
Sbjct: 181 ESNHHHHSMFNGSYTNSSTWVPQQLPATTQKHPCLSAAIGNDDVGPENGISFLSWRLNVA 240

Query: 241 NTDHRPTLVHDFTR 255
           NTDHRPTLVHDFTR
Sbjct: 241 NTDHRPTLVHDFTR 254

[Close]

BLAST of Cmc07g0199701.1 vs. NCBI nr
Match: XP_004146553.2 (GATA transcription factor 18 isoform X1 [Cucumis sativus])

HSP 1 Score: 446.4 bits (1147), Expect = 1.6e-121
Identity = 235/262 (89.69%), Postives = 238/262 (90.84%), Query Frame = 0


Query: 1   MMHHYGGGGGGGGGGASSFSLFLSVPNHGAADMYSSSTNYASSSSSSSSSPSSVDCTLSL 60
           MMHHY   GGGGGG ASSFS+FLSVPNHGAADMYSSSTNYA    SSSSSPSSVDCTLSL
Sbjct: 1   MMHHY---GGGGGGSASSFSVFLSVPNHGAADMYSSSTNYA----SSSSSPSSVDCTLSL 60

Query: 61  GTPSTRSSEFDSDKR---AAARNPHRRSAGSYVSNFCWDLLHPKHKTSGR-GAGGAASNN 120
           GTPSTRSSEFD DKR   AAARN HRRSAGSYVSNFCWDLLHPKHKTSGR G GG ASNN
Sbjct: 61  GTPSTRSSEFDGDKRAAAAAARNHHRRSAGSYVSNFCWDLLHPKHKTSGRGGGGGGASNN 120

Query: 121 NITAAVSNSGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAAATVN 180
           NI AAVSN GDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAAATVN
Sbjct: 121 NINAAVSNGGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAAATVN 180

Query: 181 SSTAESN----HHHHSMFNGSYTNSSTWVPQQLPATTQKHPCLSAAIGNDDVGPENGISF 240
           SS AESN    HHHH MFNGSYTNS+TWVPQQLPATTQKHPCLSAAIGN+DVGPENGISF
Sbjct: 181 SSVAESNHHHHHHHHPMFNGSYTNSNTWVPQQLPATTQKHPCLSAAIGNEDVGPENGISF 240

Query: 241 LSWRLNVANTDHRPTLVHDFTR 255
           LSWRLNVANTDHRPTLVHDFTR
Sbjct: 241 LSWRLNVANTDHRPTLVHDFTR 255

[Close]

BLAST of Cmc07g0199701.1 vs. NCBI nr
Match: KGN53323.2 (hypothetical protein Csa_015092 [Cucumis sativus])

HSP 1 Score: 446.4 bits (1147), Expect = 1.6e-121
Identity = 235/262 (89.69%), Postives = 238/262 (90.84%), Query Frame = 0


Query: 1   MMHHYGGGGGGGGGGASSFSLFLSVPNHGAADMYSSSTNYASSSSSSSSSPSSVDCTLSL 60
           MMHHY   GGGGGG ASSFS+FLSVPNHGAADMYSSSTNYA    SSSSSPSSVDCTLSL
Sbjct: 67  MMHHY---GGGGGGSASSFSVFLSVPNHGAADMYSSSTNYA----SSSSSPSSVDCTLSL 126

Query: 61  GTPSTRSSEFDSDKR---AAARNPHRRSAGSYVSNFCWDLLHPKHKTSGR-GAGGAASNN 120
           GTPSTRSSEFD DKR   AAARN HRRSAGSYVSNFCWDLLHPKHKTSGR G GG ASNN
Sbjct: 127 GTPSTRSSEFDGDKRAAAAAARNHHRRSAGSYVSNFCWDLLHPKHKTSGRGGGGGGASNN 186

Query: 121 NITAAVSNSGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAAATVN 180
           NI AAVSN GDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAAATVN
Sbjct: 187 NINAAVSNGGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAAATVN 246

Query: 181 SSTAESN----HHHHSMFNGSYTNSSTWVPQQLPATTQKHPCLSAAIGNDDVGPENGISF 240
           SS AESN    HHHH MFNGSYTNS+TWVPQQLPATTQKHPCLSAAIGN+DVGPENGISF
Sbjct: 247 SSVAESNHHHHHHHHPMFNGSYTNSNTWVPQQLPATTQKHPCLSAAIGNEDVGPENGISF 306

Query: 241 LSWRLNVANTDHRPTLVHDFTR 255
           LSWRLNVANTDHRPTLVHDFTR
Sbjct: 307 LSWRLNVANTDHRPTLVHDFTR 321

[Close]

BLAST of Cmc07g0199701.1 vs. NCBI nr
Match: TYK16670.1 (GATA transcription factor 18-like [Cucumis melo var. makuwa])

HSP 1 Score: 443.7 bits (1140), Expect = 1.0e-120
Identity = 222/222 (100.00%), Postives = 222/222 (100.00%), Query Frame = 0


Query: 33  MYSSSTNYASSSSSSSSSPSSVDCTLSLGTPSTRSSEFDSDKRAAARNPHRRSAGSYVSN 92
           MYSSSTNYASSSSSSSSSPSSVDCTLSLGTPSTRSSEFDSDKRAAARNPHRRSAGSYVSN
Sbjct: 1   MYSSSTNYASSSSSSSSSPSSVDCTLSLGTPSTRSSEFDSDKRAAARNPHRRSAGSYVSN 60

Query: 93  FCWDLLHPKHKTSGRGAGGAASNNNITAAVSNSGDPLLARRCANCDTTSTPLWRNGPRGP 152
           FCWDLLHPKHKTSGRGAGGAASNNNITAAVSNSGDPLLARRCANCDTTSTPLWRNGPRGP
Sbjct: 61  FCWDLLHPKHKTSGRGAGGAASNNNITAAVSNSGDPLLARRCANCDTTSTPLWRNGPRGP 120

Query: 153 KSLCNACGIRFKKEERRAAAATVNSSTAESNHHHHSMFNGSYTNSSTWVPQQLPATTQKH 212
           KSLCNACGIRFKKEERRAAAATVNSSTAESNHHHHSMFNGSYTNSSTWVPQQLPATTQKH
Sbjct: 121 KSLCNACGIRFKKEERRAAAATVNSSTAESNHHHHSMFNGSYTNSSTWVPQQLPATTQKH 180

Query: 213 PCLSAAIGNDDVGPENGISFLSWRLNVANTDHRPTLVHDFTR 255
           PCLSAAIGNDDVGPENGISFLSWRLNVANTDHRPTLVHDFTR
Sbjct: 181 PCLSAAIGNDDVGPENGISFLSWRLNVANTDHRPTLVHDFTR 222

[Close]

BLAST of Cmc07g0199701.1 vs. NCBI nr
Match: KAA0044793.1 (GATA transcription factor 18-like [Cucumis melo var. makuwa])

HSP 1 Score: 429.1 bits (1102), Expect = 2.7e-116
Identity = 216/222 (97.30%), Postives = 216/222 (97.30%), Query Frame = 0


Query: 33  MYSSSTNYASSSSSSSSSPSSVDCTLSLGTPSTRSSEFDSDKRAAARNPHRRSAGSYVSN 92
           MYSSSTNYA    SSSSSPSSVDCTLSLGTPSTRSSEFDSDKRAAARNPHRRSAGSYVSN
Sbjct: 1   MYSSSTNYA----SSSSSPSSVDCTLSLGTPSTRSSEFDSDKRAAARNPHRRSAGSYVSN 60

Query: 93  FCWDLLHPKHKTSGRGAGGAASNNNITAAVSNSGDPLLARRCANCDTTSTPLWRNGPRGP 152
           FCWDLLHPKHKTSGRGA GAASNNNITAAVSN GDPLLARRCANCDTTSTPLWRNGPRGP
Sbjct: 61  FCWDLLHPKHKTSGRGAVGAASNNNITAAVSNGGDPLLARRCANCDTTSTPLWRNGPRGP 120

Query: 153 KSLCNACGIRFKKEERRAAAATVNSSTAESNHHHHSMFNGSYTNSSTWVPQQLPATTQKH 212
           KSLCNACGIRFKKEERRAAAATVNSSTAESNHHHHSMFNGSYTNSSTWVPQQLPATTQKH
Sbjct: 121 KSLCNACGIRFKKEERRAAAATVNSSTAESNHHHHSMFNGSYTNSSTWVPQQLPATTQKH 180

Query: 213 PCLSAAIGNDDVGPENGISFLSWRLNVANTDHRPTLVHDFTR 255
           PCLSAAIGNDDVGPENGISFLSWRLNVANTDHRPTLVHDFTR
Sbjct: 181 PCLSAAIGNDDVGPENGISFLSWRLNVANTDHRPTLVHDFTR 218

[Close]

BLAST of Cmc07g0199701.1 vs. ExPASy Swiss-Prot
Match: Q8LC79 (GATA transcription factor 18 OS=Arabidopsis thaliana OX=3702 GN=GATA18 PE=1 SV=2)

HSP 1 Score: 159.8 bits (403), Expect = 3.9e-38
Identity = 120/301 (39.87%), Postives = 151/301 (50.17%), Query Frame = 0


Query: 1   MMHHYGGG---GGGGGGGASSFSLFLSVPNHGAADMYSSSTNYASSSSSSSSSPSSVDCT 60
           M HH+             A S+S+  S+ N G  +      +++S         S VDCT
Sbjct: 20  MFHHHSQSCCYNNNNNSNAGSYSMVFSMQNGGVFEQNGEDYHHSS---------SLVDCT 79

Query: 61  LSLGTPSTRSSEFDSDKRAAARNPHRRSAGSYVSNFCWDLLHPKHKTSGRGAGGAASNNN 120
           LSLGTPSTR  E D  +R +  +     A S +SNF WDL+H K+  S       A  NN
Sbjct: 80  LSLGTPSTRLCEEDEKRRRSTSS----GASSCISNF-WDLIHTKNNNS-----KTAPYNN 139

Query: 121 ITAAVSN-----------------SGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACG 180
           + +  +N                  GD LLARRCANCDTTSTPLWRNGPRGPKSLCNACG
Sbjct: 140 VPSFSANKPSRGCSGGGGGGGGGGGGDSLLARRCANCDTTSTPLWRNGPRGPKSLCNACG 199

Query: 181 IRFKKEERRAAAATVNS-------STAESNHH------HHSMFNGSYTNSSTWVPQQLPA 240
           IRFKKEERR  AAT N+        T +  HH      +H+  N +  N + W       
Sbjct: 200 IRFKKEERRTTAATGNTVVGAAPVQTDQYGHHNSGYNNYHAATNNNNNNGTPWAHHH--- 259

Query: 241 TTQKHPC------------LSAAIGN--DDVGPENGISFLSWRLNVANTDHRPTLVHDFT 255
           +TQ+ PC              + + N  +  G   G+ FLSWRLNVA+   R +LVHDFT
Sbjct: 260 STQRVPCNYPANEIRFMDDYGSGVANNVESDGAHGGVPFLSWRLNVAD---RASLVHDFT 295

[Close]

BLAST of Cmc07g0199701.1 vs. ExPASy Swiss-Prot
Match: Q6QPM2 (GATA transcription factor 19 OS=Arabidopsis thaliana OX=3702 GN=GATA19 PE=1 SV=2)

HSP 1 Score: 137.1 bits (344), Expect = 2.7e-31
Identity = 100/231 (43.29%), Postives = 122/231 (52.81%), Query Frame = 0


Query: 45  SSSSSSPSSVDCTLSLGTPSTRSSEFDSDKRAAARNPHRRSAGSYVSNFCWDLLHPKHKT 104
           S  SS  +SVDCTLSLGTPSTR    D ++R ++                WD L+     
Sbjct: 14  SHHSSPYASVDCTLSLGTPSTRLCNEDDERRFSSHTS---------DTIGWDFLN----G 73

Query: 105 SGRGAGGAASNNNITAAVSNSGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFK 164
           S +G GG   N             LLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFK
Sbjct: 74  SKKGGGGGGHN-------------LLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFK 133

Query: 165 KEERRAAAATVNSS--------------TAESNHHHHSMFNGSYTNSSTW--------VP 224
           KEERRA+ A  ++S               A +N+++++  N  Y +SS W        VP
Sbjct: 134 KEERRASTARNSTSGGGSTAAGVPTLDHQASANYYYNN--NNQYASSSPWHHQHNTQRVP 193

Query: 225 QQLPATTQKHPCLSAAIGNDDVGPENGISFLSWRLNVANTDHRPTLVHDFT 254
              PA  +        + + DV  +    FLSWRLNVA+   R  LVHDFT
Sbjct: 194 YYSPANNEYSYVDDVRVVDHDVTTD---PFLSWRLNVAD---RTGLVHDFT 210

[Close]

BLAST of Cmc07g0199701.1 vs. ExPASy Swiss-Prot
Match: B8AX51 (GATA transcription factor 15 OS=Oryza sativa subsp. indica OX=39946 GN=GATA15 PE=3 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 1.3e-25
Identity = 106/266 (39.85%), Postives = 127/266 (47.74%), Query Frame = 0


Query: 1   MMHHYGGGGGG-----------GGGGASSFSLFLSVPN---------HGAADMYSSSTNY 60
           M+HHY  GG G           G   +S+FSLF  + N           +A     ST  
Sbjct: 1   MLHHYYSGGAGHHQDVAAAGSPGDMASSTFSLFFPMSNGQCWPPSTVEESAAYDDHSTVT 60

Query: 61  ASSSSSSSSSPSSVDCTLSLGTPSTRSSEFDSDKRAAARN-----PHRRSAGSYVSNFCW 120
            S SS SSSS  SVDCTLSLGTPS+R +E  +    AA +      H  S  +  +   W
Sbjct: 61  TSPSSPSSSSTGSVDCTLSLGTPSSRRAEPVAAAAPAANHGAPVPAHYPSLSA--ATVSW 120

Query: 121 DLLHPKH--KTSGRGAGGAASNNNITAAVSNSGDPLLARRCANCDTTSTPLWRNGPRGPK 180
           D     +     GR A GAA       A     D LL RRCANC T STPLWRNGPRGPK
Sbjct: 121 DATAESYYCGQQGRPATGAAK-----CAAGAGHDALLDRRCANCGTASTPLWRNGPRGPK 180

Query: 181 SLCNACGIRFKKEERRAAAATVNSSTAESNHHHHSMFNGSYTNSSTWVPQQLPATTQKHP 240
           SLCNACGIR+KKEERRAAA T  +  A         F  +     +   +  PA T    
Sbjct: 181 SLCNACGIRYKKEERRAAATTTTADGAAG-----CGFITAQRGRGSTAAKAAPAVTTCGE 240

[Close]

BLAST of Cmc07g0199701.1 vs. ExPASy Swiss-Prot
Match: Q6L5E5 (GATA transcription factor 15 OS=Oryza sativa subsp. japonica OX=39947 GN=GATA15 PE=1 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 3.8e-25
Identity = 107/267 (40.07%), Postives = 125/267 (46.82%), Query Frame = 0


Query: 1   MMHHYGGGGGG-----------GGGGASSFSLFLSVPN---------HGAADMYSSSTNY 60
           M+HHY  GG G           G   +S+FSLF  + N           +A     ST  
Sbjct: 1   MLHHYYSGGAGHHQDVAAAGSPGDMASSTFSLFFPMSNGQCWPPSTVEESAAYDDHSTVT 60

Query: 61  ASSSSSSSSSPSSVDCTLSLGTPSTRSSEFDSDKRAAARN-----PHRRSAGSYVSNFCW 120
            S SS SSSS  SVDCTLSLGTPS+R +E  +    AA +      H  S  +  +   W
Sbjct: 61  TSPSSPSSSSTGSVDCTLSLGTPSSRRAEPVAAAAPAANHGAPVPAHYPSLSA--ATVSW 120

Query: 121 DLLHPKH--KTSGRGAGGAASNNNITAAVSNSGDPLLARRCANCDTTSTPLWRNGPRGPK 180
           D     +     GR A GAA       A     D LL RRCANC T STPLWRNGPRGPK
Sbjct: 121 DATAESYYCGQQGRPATGAAK-----CAAGAGHDALLDRRCANCGTASTPLWRNGPRGPK 180

Query: 181 SLCNACGIRFKKEERRAAAATVNSSTAESNHHHHSMFNGSYTNSSTWVPQQLPATTQKHP 240
           SLCNACGIR+KKEERRAAA T  +  A                 ST        TT    
Sbjct: 181 SLCNACGIRYKKEERRAAATTTTADGAAG----CGFITAQRGRGSTAAKAAPAVTTCGEE 240

[Close]

BLAST of Cmc07g0199701.1 vs. ExPASy Swiss-Prot
Match: Q9ZPX0 (GATA transcription factor 20 OS=Arabidopsis thaliana OX=3702 GN=GATA20 PE=2 SV=2)

HSP 1 Score: 109.4 bits (272), Expect = 6.1e-23
Identity = 98/241 (40.66%), Postives = 119/241 (49.38%), Query Frame = 0


Query: 17  SSFSLFLSVPNHGAADMYSSSTNYASSSSSSSSSPSSVDCTLSLGTPSTRSSEFDSDKRA 76
           S+FS+F S  N        +  NY   ++ SSS  +SVDCTLSLGTPSTR    D   R 
Sbjct: 8   SNFSMFFSSENDD-----QNHHNYDPYNNFSSS--TSVDCTLSLGTPSTR---LDDHHRF 67

Query: 77  AARNPHRRSAGSYVSNFCWDLLHPKHKTSGRGAGGAASNNNITAAVSNSGDPLLARRCAN 136
           ++ N +  S   Y+            KTS    GG A +              L RRCA+
Sbjct: 68  SSANSNNISGDFYIHG-------GNAKTSSYKKGGVAHS--------------LPRRCAS 127

Query: 137 CDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAAATV-----NSSTAE---------- 196
           CDTTSTPLWRNGP+GPKSLCNACGIRFKKEERRA A  +      SS AE          
Sbjct: 128 CDTTSTPLWRNGPKGPKSLCNACGIRFKKEERRATARNLTISGGGSSAAEVPVENSYNGG 187

Query: 197 ----SNHHHHSMFNGSYTNSS-TWVPQQLPATTQKHPCLSAAIGNDDVGPEN--GISFLS 236
               S+HHHH      Y +SS +W  Q     TQ+ P  S     +    +N    SF+S
Sbjct: 188 GNYYSHHHHH------YASSSPSWAHQ----NTQRVPYFSPVPEMEYPYVDNVTASSFMS 207

[Close]

BLAST of Cmc07g0199701.1 vs. ExPASy TrEMBL
Match: A0A1S3BSF9 (GATA transcription factor 18-like OS=Cucumis melo OX=3656 GN=LOC103493199 PE=3 SV=1)

HSP 1 Score: 503.1 bits (1294), Expect = 7.0e-139
Identity = 254/254 (100.00%), Postives = 254/254 (100.00%), Query Frame = 0


Query: 1   MMHHYGGGGGGGGGGASSFSLFLSVPNHGAADMYSSSTNYASSSSSSSSSPSSVDCTLSL 60
           MMHHYGGGGGGGGGGASSFSLFLSVPNHGAADMYSSSTNYASSSSSSSSSPSSVDCTLSL
Sbjct: 1   MMHHYGGGGGGGGGGASSFSLFLSVPNHGAADMYSSSTNYASSSSSSSSSPSSVDCTLSL 60

Query: 61  GTPSTRSSEFDSDKRAAARNPHRRSAGSYVSNFCWDLLHPKHKTSGRGAGGAASNNNITA 120
           GTPSTRSSEFDSDKRAAARNPHRRSAGSYVSNFCWDLLHPKHKTSGRGAGGAASNNNITA
Sbjct: 61  GTPSTRSSEFDSDKRAAARNPHRRSAGSYVSNFCWDLLHPKHKTSGRGAGGAASNNNITA 120

Query: 121 AVSNSGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAAATVNSSTA 180
           AVSNSGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAAATVNSSTA
Sbjct: 121 AVSNSGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAAATVNSSTA 180

Query: 181 ESNHHHHSMFNGSYTNSSTWVPQQLPATTQKHPCLSAAIGNDDVGPENGISFLSWRLNVA 240
           ESNHHHHSMFNGSYTNSSTWVPQQLPATTQKHPCLSAAIGNDDVGPENGISFLSWRLNVA
Sbjct: 181 ESNHHHHSMFNGSYTNSSTWVPQQLPATTQKHPCLSAAIGNDDVGPENGISFLSWRLNVA 240

Query: 241 NTDHRPTLVHDFTR 255
           NTDHRPTLVHDFTR
Sbjct: 241 NTDHRPTLVHDFTR 254

[Close]

BLAST of Cmc07g0199701.1 vs. ExPASy TrEMBL
Match: A0A0A0KY15 (GATA-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G046650 PE=3 SV=1)

HSP 1 Score: 446.4 bits (1147), Expect = 7.8e-122
Identity = 235/262 (89.69%), Postives = 238/262 (90.84%), Query Frame = 0


Query: 1   MMHHYGGGGGGGGGGASSFSLFLSVPNHGAADMYSSSTNYASSSSSSSSSPSSVDCTLSL 60
           MMHHY   GGGGGG ASSFS+FLSVPNHGAADMYSSSTNYA    SSSSSPSSVDCTLSL
Sbjct: 1   MMHHY---GGGGGGSASSFSVFLSVPNHGAADMYSSSTNYA----SSSSSPSSVDCTLSL 60

Query: 61  GTPSTRSSEFDSDKR---AAARNPHRRSAGSYVSNFCWDLLHPKHKTSGR-GAGGAASNN 120
           GTPSTRSSEFD DKR   AAARN HRRSAGSYVSNFCWDLLHPKHKTSGR G GG ASNN
Sbjct: 61  GTPSTRSSEFDGDKRAAAAAARNHHRRSAGSYVSNFCWDLLHPKHKTSGRGGGGGGASNN 120

Query: 121 NITAAVSNSGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAAATVN 180
           NI AAVSN GDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAAATVN
Sbjct: 121 NINAAVSNGGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAAATVN 180

Query: 181 SSTAESN----HHHHSMFNGSYTNSSTWVPQQLPATTQKHPCLSAAIGNDDVGPENGISF 240
           SS AESN    HHHH MFNGSYTNS+TWVPQQLPATTQKHPCLSAAIGN+DVGPENGISF
Sbjct: 181 SSVAESNHHHHHHHHPMFNGSYTNSNTWVPQQLPATTQKHPCLSAAIGNEDVGPENGISF 240

Query: 241 LSWRLNVANTDHRPTLVHDFTR 255
           LSWRLNVANTDHRPTLVHDFTR
Sbjct: 241 LSWRLNVANTDHRPTLVHDFTR 255

[Close]

BLAST of Cmc07g0199701.1 vs. ExPASy TrEMBL
Match: A0A5D3CZ78 (GATA transcription factor 18-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G005010 PE=3 SV=1)

HSP 1 Score: 443.7 bits (1140), Expect = 5.1e-121
Identity = 222/222 (100.00%), Postives = 222/222 (100.00%), Query Frame = 0


Query: 33  MYSSSTNYASSSSSSSSSPSSVDCTLSLGTPSTRSSEFDSDKRAAARNPHRRSAGSYVSN 92
           MYSSSTNYASSSSSSSSSPSSVDCTLSLGTPSTRSSEFDSDKRAAARNPHRRSAGSYVSN
Sbjct: 1   MYSSSTNYASSSSSSSSSPSSVDCTLSLGTPSTRSSEFDSDKRAAARNPHRRSAGSYVSN 60

Query: 93  FCWDLLHPKHKTSGRGAGGAASNNNITAAVSNSGDPLLARRCANCDTTSTPLWRNGPRGP 152
           FCWDLLHPKHKTSGRGAGGAASNNNITAAVSNSGDPLLARRCANCDTTSTPLWRNGPRGP
Sbjct: 61  FCWDLLHPKHKTSGRGAGGAASNNNITAAVSNSGDPLLARRCANCDTTSTPLWRNGPRGP 120

Query: 153 KSLCNACGIRFKKEERRAAAATVNSSTAESNHHHHSMFNGSYTNSSTWVPQQLPATTQKH 212
           KSLCNACGIRFKKEERRAAAATVNSSTAESNHHHHSMFNGSYTNSSTWVPQQLPATTQKH
Sbjct: 121 KSLCNACGIRFKKEERRAAAATVNSSTAESNHHHHSMFNGSYTNSSTWVPQQLPATTQKH 180

Query: 213 PCLSAAIGNDDVGPENGISFLSWRLNVANTDHRPTLVHDFTR 255
           PCLSAAIGNDDVGPENGISFLSWRLNVANTDHRPTLVHDFTR
Sbjct: 181 PCLSAAIGNDDVGPENGISFLSWRLNVANTDHRPTLVHDFTR 222

[Close]

BLAST of Cmc07g0199701.1 vs. ExPASy TrEMBL
Match: A0A5A7TMS0 (GATA transcription factor 18-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold74G00840 PE=3 SV=1)

HSP 1 Score: 429.1 bits (1102), Expect = 1.3e-116
Identity = 216/222 (97.30%), Postives = 216/222 (97.30%), Query Frame = 0


Query: 33  MYSSSTNYASSSSSSSSSPSSVDCTLSLGTPSTRSSEFDSDKRAAARNPHRRSAGSYVSN 92
           MYSSSTNYA    SSSSSPSSVDCTLSLGTPSTRSSEFDSDKRAAARNPHRRSAGSYVSN
Sbjct: 1   MYSSSTNYA----SSSSSPSSVDCTLSLGTPSTRSSEFDSDKRAAARNPHRRSAGSYVSN 60

Query: 93  FCWDLLHPKHKTSGRGAGGAASNNNITAAVSNSGDPLLARRCANCDTTSTPLWRNGPRGP 152
           FCWDLLHPKHKTSGRGA GAASNNNITAAVSN GDPLLARRCANCDTTSTPLWRNGPRGP
Sbjct: 61  FCWDLLHPKHKTSGRGAVGAASNNNITAAVSNGGDPLLARRCANCDTTSTPLWRNGPRGP 120

Query: 153 KSLCNACGIRFKKEERRAAAATVNSSTAESNHHHHSMFNGSYTNSSTWVPQQLPATTQKH 212
           KSLCNACGIRFKKEERRAAAATVNSSTAESNHHHHSMFNGSYTNSSTWVPQQLPATTQKH
Sbjct: 121 KSLCNACGIRFKKEERRAAAATVNSSTAESNHHHHSMFNGSYTNSSTWVPQQLPATTQKH 180

Query: 213 PCLSAAIGNDDVGPENGISFLSWRLNVANTDHRPTLVHDFTR 255
           PCLSAAIGNDDVGPENGISFLSWRLNVANTDHRPTLVHDFTR
Sbjct: 181 PCLSAAIGNDDVGPENGISFLSWRLNVANTDHRPTLVHDFTR 218

[Close]

BLAST of Cmc07g0199701.1 vs. ExPASy TrEMBL
Match: A0A6J1FQ08 (GATA transcription factor 19-like OS=Cucurbita moschata OX=3662 GN=LOC111447753 PE=3 SV=1)

HSP 1 Score: 339.3 bits (869), Expect = 1.3e-89
Identity = 202/279 (72.40%), Postives = 215/279 (77.06%), Query Frame = 0


Query: 1   MMHHYGGGGGGGGGGASSFSLFLSVPNHGAA-----DMYSSSTNYASSSSSSSSSPSSVD 60
           MMHH    GGG GG ASSFS+FLSVPNHG A     D+YS+  NYASSSSSSSSSPSSVD
Sbjct: 1   MMHHC---GGGAGGAASSFSVFLSVPNHGGAAHDMMDIYSN--NYASSSSSSSSSPSSVD 60

Query: 61  CTLSLGTPSTRSSEFDSDKRAAARNPHRRSAGSYVSNFCWDLLHPKHKTSGRGAGGAASN 120
           CTLSLGTPSTRSSEFDSDKRAA R+ HRRSAGSYVSNFCWDLLHPKHK++GR     ASN
Sbjct: 61  CTLSLGTPSTRSSEFDSDKRAAPRH-HRRSAGSYVSNFCWDLLHPKHKSAGR---STASN 120

Query: 121 NNITAAVSNSGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAA--- 180
               AAV + GDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAA   
Sbjct: 121 ---AAAVPSGGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAATVN 180

Query: 181 ATVNSSTAESNHH-----HHSMFNGSYTNS-STWVPQQLPATTQKHPCLSAA-------- 240
            T  +  AESN+H     HH MFNG+YTNS + WVP   P  TQK PCLSAA        
Sbjct: 181 CTATAMAAESNNHHHLHQHHQMFNGNYTNSTAAWVPHHSPVATQKLPCLSAAAINNESMF 240

Query: 241 IGNDDV---GPENGISFLSWRLNVANTDHRPTLVHDFTR 255
           IGNDDV     ENGIS+LSWRLNV  TDHRP+LVHDFTR
Sbjct: 241 IGNDDVRRTEQENGISYLSWRLNV--TDHRPSLVHDFTR 265

[Close]

BLAST of Cmc07g0199701.1 vs. TAIR 10
Match: AT3G50870.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 159.8 bits (403), Expect = 2.8e-39
Identity = 120/301 (39.87%), Postives = 151/301 (50.17%), Query Frame = 0


Query: 1   MMHHYGGG---GGGGGGGASSFSLFLSVPNHGAADMYSSSTNYASSSSSSSSSPSSVDCT 60
           M HH+             A S+S+  S+ N G  +      +++S         S VDCT
Sbjct: 20  MFHHHSQSCCYNNNNNSNAGSYSMVFSMQNGGVFEQNGEDYHHSS---------SLVDCT 79

Query: 61  LSLGTPSTRSSEFDSDKRAAARNPHRRSAGSYVSNFCWDLLHPKHKTSGRGAGGAASNNN 120
           LSLGTPSTR  E D  +R +  +     A S +SNF WDL+H K+  S       A  NN
Sbjct: 80  LSLGTPSTRLCEEDEKRRRSTSS----GASSCISNF-WDLIHTKNNNS-----KTAPYNN 139

Query: 121 ITAAVSN-----------------SGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACG 180
           + +  +N                  GD LLARRCANCDTTSTPLWRNGPRGPKSLCNACG
Sbjct: 140 VPSFSANKPSRGCSGGGGGGGGGGGGDSLLARRCANCDTTSTPLWRNGPRGPKSLCNACG 199

Query: 181 IRFKKEERRAAAATVNS-------STAESNHH------HHSMFNGSYTNSSTWVPQQLPA 240
           IRFKKEERR  AAT N+        T +  HH      +H+  N +  N + W       
Sbjct: 200 IRFKKEERRTTAATGNTVVGAAPVQTDQYGHHNSGYNNYHAATNNNNNNGTPWAHHH--- 259

Query: 241 TTQKHPC------------LSAAIGN--DDVGPENGISFLSWRLNVANTDHRPTLVHDFT 255
           +TQ+ PC              + + N  +  G   G+ FLSWRLNVA+   R +LVHDFT
Sbjct: 260 STQRVPCNYPANEIRFMDDYGSGVANNVESDGAHGGVPFLSWRLNVAD---RASLVHDFT 295

[Close]

BLAST of Cmc07g0199701.1 vs. TAIR 10
Match: AT4G36620.1 (GATA transcription factor 19 )

HSP 1 Score: 137.1 bits (344), Expect = 1.9e-32
Identity = 100/231 (43.29%), Postives = 122/231 (52.81%), Query Frame = 0


Query: 45  SSSSSSPSSVDCTLSLGTPSTRSSEFDSDKRAAARNPHRRSAGSYVSNFCWDLLHPKHKT 104
           S  SS  +SVDCTLSLGTPSTR    D ++R ++                WD L+     
Sbjct: 14  SHHSSPYASVDCTLSLGTPSTRLCNEDDERRFSSHTS---------DTIGWDFLN----G 73

Query: 105 SGRGAGGAASNNNITAAVSNSGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFK 164
           S +G GG   N             LLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFK
Sbjct: 74  SKKGGGGGGHN-------------LLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFK 133

Query: 165 KEERRAAAATVNSS--------------TAESNHHHHSMFNGSYTNSSTW--------VP 224
           KEERRA+ A  ++S               A +N+++++  N  Y +SS W        VP
Sbjct: 134 KEERRASTARNSTSGGGSTAAGVPTLDHQASANYYYNN--NNQYASSSPWHHQHNTQRVP 193

Query: 225 QQLPATTQKHPCLSAAIGNDDVGPENGISFLSWRLNVANTDHRPTLVHDFT 254
              PA  +        + + DV  +    FLSWRLNVA+   R  LVHDFT
Sbjct: 194 YYSPANNEYSYVDDVRVVDHDVTTD---PFLSWRLNVAD---RTGLVHDFT 210

[Close]

BLAST of Cmc07g0199701.1 vs. TAIR 10
Match: AT2G18380.1 (GATA transcription factor 20 )

HSP 1 Score: 109.4 bits (272), Expect = 4.3e-24
Identity = 98/241 (40.66%), Postives = 119/241 (49.38%), Query Frame = 0


Query: 17  SSFSLFLSVPNHGAADMYSSSTNYASSSSSSSSSPSSVDCTLSLGTPSTRSSEFDSDKRA 76
           S+FS+F S  N        +  NY   ++ SSS  +SVDCTLSLGTPSTR    D   R 
Sbjct: 8   SNFSMFFSSENDD-----QNHHNYDPYNNFSSS--TSVDCTLSLGTPSTR---LDDHHRF 67

Query: 77  AARNPHRRSAGSYVSNFCWDLLHPKHKTSGRGAGGAASNNNITAAVSNSGDPLLARRCAN 136
           ++ N +  S   Y+            KTS    GG A +              L RRCA+
Sbjct: 68  SSANSNNISGDFYIHG-------GNAKTSSYKKGGVAHS--------------LPRRCAS 127

Query: 137 CDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAAATV-----NSSTAE---------- 196
           CDTTSTPLWRNGP+GPKSLCNACGIRFKKEERRA A  +      SS AE          
Sbjct: 128 CDTTSTPLWRNGPKGPKSLCNACGIRFKKEERRATARNLTISGGGSSAAEVPVENSYNGG 187

Query: 197 ----SNHHHHSMFNGSYTNSS-TWVPQQLPATTQKHPCLSAAIGNDDVGPEN--GISFLS 236
               S+HHHH      Y +SS +W  Q     TQ+ P  S     +    +N    SF+S
Sbjct: 188 GNYYSHHHHH------YASSSPSWAHQ----NTQRVPYFSPVPEMEYPYVDNVTASSFMS 207

[Close]

BLAST of Cmc07g0199701.1 vs. TAIR 10
Match: AT4G26150.1 (cytokinin-responsive gata factor 1 )

HSP 1 Score: 70.5 bits (171), Expect = 2.2e-12
Identity = 36/71 (50.70%), Postives = 52/71 (73.24%), Query Frame = 0


Query: 114 SNNNITAAVSNS------GDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEE 173
           +NN+ ++ +SNS       +  + R C++C+TT TPLWR+GPRGPKSLCNACGIR +++ 
Sbjct: 175 TNNDQSSNLSNSERQNGYNNDCVIRICSDCNTTKTPLWRSGPRGPKSLCNACGIR-QRKA 234

Query: 174 RRAAAATVNSS 179
           RRAA AT  ++
Sbjct: 235 RRAAMATATAT 244

[Close]

BLAST of Cmc07g0199701.1 vs. TAIR 10
Match: AT5G56860.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 69.3 bits (168), Expect = 5.0e-12
Identity = 31/50 (62.00%), Postives = 37/50 (74.00%), Query Frame = 0


Query: 132 RRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAAATVNSSTAE 182
           R C++C+TT TPLWR+GPRGPKSLCNACGIR +K  R A AA   +   E
Sbjct: 230 RVCSDCNTTKTPLWRSGPRGPKSLCNACGIRQRKARRAAMAAAAAAGDQE 279

The following BLAST results are available for this feature:

BLAST of Cmc07g0199701.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008452087.1	1.5e-138	100.00	PREDICTED: GATA transcription factor 18-like [Cucumis melo]	[more]
XP_004146553.2	1.6e-121	89.69	GATA transcription factor 18 isoform X1 [Cucumis sativus]	[more]
KGN53323.2	1.6e-121	89.69	hypothetical protein Csa_015092 [Cucumis sativus]	[more]
TYK16670.1	1.0e-120	100.00	GATA transcription factor 18-like [Cucumis melo var. makuwa]	[more]
KAA0044793.1	2.7e-116	97.30	GATA transcription factor 18-like [Cucumis melo var. makuwa]	[more]

BLAST of Cmc07g0199701.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LC79	3.9e-38	39.87	GATA transcription factor 18 OS=Arabidopsis thaliana OX=3702 GN=GATA18 PE=1 SV=2	[more]
Q6QPM2	2.7e-31	43.29	GATA transcription factor 19 OS=Arabidopsis thaliana OX=3702 GN=GATA19 PE=1 SV=2	[more]
B8AX51	1.3e-25	39.85	GATA transcription factor 15 OS=Oryza sativa subsp. indica OX=39946 GN=GATA15 PE...	[more]
Q6L5E5	3.8e-25	40.07	GATA transcription factor 15 OS=Oryza sativa subsp. japonica OX=39947 GN=GATA15 ...	[more]
Q9ZPX0	6.1e-23	40.66	GATA transcription factor 20 OS=Arabidopsis thaliana OX=3702 GN=GATA20 PE=2 SV=2	[more]

BLAST of Cmc07g0199701.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BSF9	7.0e-139	100.00	GATA transcription factor 18-like OS=Cucumis melo OX=3656 GN=LOC103493199 PE=3 S...	[more]
A0A0A0KY15	7.8e-122	89.69	GATA-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G046650 P...	[more]
A0A5D3CZ78	5.1e-121	100.00	GATA transcription factor 18-like OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5A7TMS0	1.3e-116	97.30	GATA transcription factor 18-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A6J1FQ08	1.3e-89	72.40	GATA transcription factor 19-like OS=Cucurbita moschata OX=3662 GN=LOC111447753 ...	[more]

BLAST of Cmc07g0199701.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G50870.1	2.8e-39	39.87	GATA type zinc finger transcription factor family protein	[more]
AT4G36620.1	1.9e-32	43.29	GATA transcription factor 19	[more]
AT2G18380.1	4.3e-24	40.66	GATA transcription factor 20	[more]
AT4G26150.1	2.2e-12	50.70	cytokinin-responsive gata factor 1	[more]
AT5G56860.1	5.0e-12	62.00	GATA type zinc finger transcription factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000679	Zinc finger, GATA-type	SMART	SM00401	GATA_3	coord: 128..180 e-value: 1.5E-19 score: 81.0
IPR000679	Zinc finger, GATA-type	PFAM	PF00320	GATA	coord: 134..168 e-value: 6.1E-18 score: 64.1
IPR000679	Zinc finger, GATA-type	PROSITE	PS00344	GATA_ZN_FINGER_1	coord: 134..159
IPR000679	Zinc finger, GATA-type	PROSITE	PS50114	GATA_ZN_FINGER_2	coord: 128..164 score: 13.889895
IPR000679	Zinc finger, GATA-type	CDD	cd00202	ZnF_GATA	coord: 133..165 e-value: 9.27808E-14 score: 62.3902
IPR013088	Zinc finger, NHR/GATA-type	GENE3D	3.30.50.10		coord: 130..189 e-value: 1.3E-16 score: 62.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 36..67
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 36..83
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 131..176
IPR044272	GATA transcription factor 18/19/20	PANTHER	PTHR46813	GATA TRANSCRIPTION FACTOR 18	coord: 16..251

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cmc07g0199701	Cmc07g0199701	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc07g0199701.1-exon	Cmc07g0199701.1-exon-CMiso1.1chr07:22510147..22510689	exon
Cmc07g0199701.1-exon	Cmc07g0199701.1-exon-CMiso1.1chr07:22511334..22511942	exon
Cmc07g0199701.1-exon	Cmc07g0199701.1-exon-CMiso1.1chr07:22516306..22516584	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc07g0199701.1-three_prime_utr	Cmc07g0199701.1-three_prime_utr-CMiso1.1chr07:22510147..22510383	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc07g0199701.1-cds	Cmc07g0199701.1-cds-CMiso1.1chr07:22510384..22510689	CDS
Cmc07g0199701.1-cds	Cmc07g0199701.1-cds-CMiso1.1chr07:22511334..22511792	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc07g0199701.1-five_prime_utr	Cmc07g0199701.1-five_prime_utr-CMiso1.1chr07:22511793..22511942	five_prime_UTR
Cmc07g0199701.1-five_prime_utr	Cmc07g0199701.1-five_prime_utr-CMiso1.1chr07:22516306..22516584	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cmc07g0199701.1	Cmc07g0199701.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009908	flower development
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0031969	chloroplast membrane
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0008270	zinc ion binding