Cmc07g0195181.1 (mRNA) Melon (Charmono) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGGAAAAGCTGAAAAATGGAGTGATGTTCTTGTGTGTTTGTTCGTTAAAAAGAAAAAGAAAAAGAAAACGGCGATGCTTCATTTAATGCTCTCTCTCTCTCTCGCTCACACTCTCTTCGTATTGTGATTATCGAAATTTCTCCAAACGCCAAAATTTCCCATTTCCCTTTTCTCGCCTCTCCCGCTCCACTCTTTCTCCTTCTTTGATCTCATCGCCATTTCTCTTTTTATTTATTTCTCAATCCCCCGACTCTCTCTTTTCATTCCGATCCCTTCTACATTCTCCAAACCTTCTTCTTCACCACTTCCGCATTTAACCCACAATTTCTTTCTACCTTCTCCCTTCCTCTCCAATGGCCTCCTTCACTATCCCATGTCCCAAGGCTTCCACTCTTCCCGGTTTCGGCTCCAGTGCTCGCAAGAATTGGCATCACAACCACATTAACCCCAATCTTTCTCTTAATCGCCTCTTCAAGGATTCCTTTTTGGTTGGATCTTCTTTTGTCGACTCCCCACTTTCTGGGACTGAGGTATTACTGCCTTCATTCCACATTCTTGTTAAAATCTTCACTGACTTCATGTTTTTACAATCTCTGAACTCTATATGTGCTTAACGTAATTTTTAACTTTGTAATATTTTTTTTAAATTCCCTCTGGATGGATTCTGTTGGTAGGCTTTGGCATAAAACCATGTGGTTGAGTGTAGGAAAGTAATTGATGGATTTTGGGACATTTTAAGTTCCAATTTTAGGACCTACAGGAGGTCACTTGGATAGGAGTTTCTAATTTCTTTTTTTCATAGTTACTTTCATTCGTGGCACTTTACCGTTCAATTAGAATCTAGCGTAGAGAAAGAAAGCTGATGAATTAAAGAATGATGAGAAAGAGCCAAGCGAAGAGAAAGTGATGGTGTGTATTGGAAGGTTTAGTACAGGATTATTCACTGTTTTTGGGCTGTTTTCAGGAAGAGCAGATTGGTTCTTTTATACCTTCCTAGACCCAGTTTCATTTCATGTCCTCAATGAAAATCGTTTGTTTGTCCCGAAAAGAAATGTTCTGTTCAAGGTATTAAATTGTGTTTGTTTAATTCAGTCAGCAGCATATCCAGATTAGGTTTTAGTGTATTCAAGGTATTTAAATGGATCTCTTTTGGCTGGGGATCCTATCGGTCATCATTCGTAGTTTGTAGTGATGAACAGGAAACTGAAAAAAAATTTGTGTACCTAACGGTTGATTTTTAAACGACTTTGGTGTAGAGGACATTTTGAAGCTGAACGGTGGGGCAATACTGATGACTTTGTCATCATCGCCATAAGTTGTTCACAGATGTGTTTCTTGCTAATTTGTTTTTGAACTACAACTTGTATGTTAATGGAGCCTGTAGATGGTGAGATGTTTATGCTTTTAAATTACATTTTGATCTTAGTATGTTCTTCTTTTGTGCTTTTCAGTGGCCAAACAAGAAAAAGTCTACTGGTTTGGTTGTGTATGCACTTAAAGAGGTTAGTTGTTGCGATGAACTTTTAGGTGTATGTAGATTTCTGAATGCATTCATAGATTTTAGGTGTATGTATATATATATATGTATTTTTTTTTTAATCCTAGGTGGTTGTTGGAAAAACTTCAAATTCTGCACCAGCGATTGCCTCTACACCTGGGAATGGTCCATCTGGAGGAAAAGTCGAGTCTGCAGTCACAGTTTCTGATCAAAGTTACCTTCCAGATGAGCCGTCAATTTCTACATTCATGAGCCAAGTTTCAGATCTCATCAAGTGCGTTACTACCTTCCGTATTGTGTAGGAATTAAACTTTGAGAGTGTTGAGTCATCATCTCCGGGTTGCACCACCTTTTTTCATTGAGTCTTTACATAATCTTTTTTTATATGCAGACTTGTTGATTCAAGAGACATTATGGAACTGCAACTGAAACAACAAGATTGCGAAATTGTAATAAGAAAAAAGGAAGCTATACAACCACCAATACCCACACAGGCTCCAAGTCCATACATAGCATTGCCACCACCTCATGTGCTTACCACGGTTGCACCTCCACCGACCCCGGCAGCTGCACCTACAGCTACTTCTACTGCTCGTGCAAGTCCTCTTCCTGCACCAAAAACAGGTGGTTTGTATCCACCTTTGAAATGCCCCATGGCCGGAACATTTTATAGAAGCCCTGCTCCAGGAGAGCCTCCATTTGTTAAGGTAACTTGAGAATGATATAATGTAAGGGAGAACAAAAATTTATCAGGACTCGACAGAAGTGTTTACTTGTAACTTGTTTTTCGTATCTCGTGTGTTCTGTTTTTGTAGGTTGGCGATAAAGTGCAGAAAGGCCAAGTGATATGTATAATTGAAGCCATGAAGTTAATGAATGAGATTGAGGTAAGCTTCGACAATGCCAACCTTTTTATTTTTGTAAATTTAGATACATATGTAGCTATTACTTATTGTATGTTCGACTTCAGGCTGATCAATCTGGAACCATAGCTGAAATATTGGCTGAAGATGGTAAACCAGTCAGCTTAGACACGGTACCCTCTCTCCGATATCATATCGATACGAAATGTCTTATATTCTGTCTTTGCCCTTGAAAACAATCTAAATGTTAAAATCTTCTTTTGTTCTGCAGCCTCTTGTTGTGATTGTACCTTGACAAACTTGAAGAGAGGACAACCTTTCGATCCTTTGCCTTTTTTTTTTTTTTTTTCTTCTTTTAATTACTTTAGGTTCACATTTGTTATAGATTTTACGCACTTTTGGACTACGTGTACTTTTAACTGAATAAAGACGACCTTTTGTTGATTGAAGATGATGAGGCCTCTTTTGTTATAATTAATATTCAAATATCTTGAAAAATTTCT GGGAAAAGCTGAAAAATGGAGTGATGTTCTTGTGTGTTTGTTCGTTAAAAAGAAAAAGAAAAAGAAAACGGCGATGCTTCATTTAATGCTCTCTCTCTCTCTCGCTCACACTCTCTTCGTATTGTGATTATCGAAATTTCTCCAAACGCCAAAATTTCCCATTTCCCTTTTCTCGCCTCTCCCGCTCCACTCTTTCTCCTTCTTTGATCTCATCGCCATTTCTCTTTTTATTTATTTCTCAATCCCCCGACTCTCTCTTTTCATTCCGATCCCTTCTACATTCTCCAAACCTTCTTCTTCACCACTTCCGCATTTAACCCACAATTTCTTTCTACCTTCTCCCTTCCTCTCCAATGGCCTCCTTCACTATCCCATGTCCCAAGGCTTCCACTCTTCCCGGTTTCGGCTCCAGTGCTCGCAAGAATTGGCATCACAACCACATTAACCCCAATCTTTCTCTTAATCGCCTCTTCAAGGATTCCTTTTTGGTTGGATCTTCTTTTGTCGACTCCCCACTTTCTGGGACTGAGTGGCCAAACAAGAAAAAGTCTACTGGTTTGGTTGTGTATGCACTTAAAGAGGTGGTTGTTGGAAAAACTTCAAATTCTGCACCAGCGATTGCCTCTACACCTGGGAATGGTCCATCTGGAGGAAAAGTCGAGTCTGCAGTCACAGTTTCTGATCAAAGTTACCTTCCAGATGAGCCGTCAATTTCTACATTCATGAGCCAAGTTTCAGATCTCATCAAACTTGTTGATTCAAGAGACATTATGGAACTGCAACTGAAACAACAAGATTGCGAAATTGTAATAAGAAAAAAGGAAGCTATACAACCACCAATACCCACACAGGCTCCAAGTCCATACATAGCATTGCCACCACCTCATGTGCTTACCACGGTTGCACCTCCACCGACCCCGGCAGCTGCACCTACAGCTACTTCTACTGCTCGTGCAAGTCCTCTTCCTGCACCAAAAACAGGTGGTTTGTATCCACCTTTGAAATGCCCCATGGCCGGAACATTTTATAGAAGCCCTGCTCCAGGAGAGCCTCCATTTGTTAAGGTTGGCGATAAAGTGCAGAAAGGCCAAGTGATATGTATAATTGAAGCCATGAAGTTAATGAATGAGATTGAGGCTGATCAATCTGGAACCATAGCTGAAATATTGGCTGAAGATGGTAAACCAGTCAGCTTAGACACGCCTCTTGTTGTGATTGTACCTTGACAAACTTGAAGAGAGGACAACCTTTCGATCCTTTGCCTTTTTTTTTTTTTTTTTCTTCTTTTAATTACTTTAGGTTCACATTTGTTATAGATTTTACGCACTTTTGGACTACGTGTACTTTTAACTGAATAAAGACGACCTTTTGTTGATTGAAGATGATGAGGCCTCTTTTGTTATAATTAATATTCAAATATCTTGAAAAATTTCT ATGGCCTCCTTCACTATCCCATGTCCCAAGGCTTCCACTCTTCCCGGTTTCGGCTCCAGTGCTCGCAAGAATTGGCATCACAACCACATTAACCCCAATCTTTCTCTTAATCGCCTCTTCAAGGATTCCTTTTTGGTTGGATCTTCTTTTGTCGACTCCCCACTTTCTGGGACTGAGTGGCCAAACAAGAAAAAGTCTACTGGTTTGGTTGTGTATGCACTTAAAGAGGTGGTTGTTGGAAAAACTTCAAATTCTGCACCAGCGATTGCCTCTACACCTGGGAATGGTCCATCTGGAGGAAAAGTCGAGTCTGCAGTCACAGTTTCTGATCAAAGTTACCTTCCAGATGAGCCGTCAATTTCTACATTCATGAGCCAAGTTTCAGATCTCATCAAACTTGTTGATTCAAGAGACATTATGGAACTGCAACTGAAACAACAAGATTGCGAAATTGTAATAAGAAAAAAGGAAGCTATACAACCACCAATACCCACACAGGCTCCAAGTCCATACATAGCATTGCCACCACCTCATGTGCTTACCACGGTTGCACCTCCACCGACCCCGGCAGCTGCACCTACAGCTACTTCTACTGCTCGTGCAAGTCCTCTTCCTGCACCAAAAACAGGTGGTTTGTATCCACCTTTGAAATGCCCCATGGCCGGAACATTTTATAGAAGCCCTGCTCCAGGAGAGCCTCCATTTGTTAAGGTTGGCGATAAAGTGCAGAAAGGCCAAGTGATATGTATAATTGAAGCCATGAAGTTAATGAATGAGATTGAGGCTGATCAATCTGGAACCATAGCTGAAATATTGGCTGAAGATGGTAAACCAGTCAGCTTAGACACGCCTCTTGTTGTGATTGTACCTTGA MASFTIPCPKASTLPGFGSSARKNWHHNHINPNLSLNRLFKDSFLVGSSFVDSPLSGTEWPNKKKSTGLVVYALKEVVVGKTSNSAPAIASTPGNGPSGGKVESAVTVSDQSYLPDEPSISTFMSQVSDLIKLVDSRDIMELQLKQQDCEIVIRKKEAIQPPIPTQAPSPYIALPPPHVLTTVAPPPTPAAAPTATSTARASPLPAPKTGGLYPPLKCPMAGTFYRSPAPGEPPFVKVGDKVQKGQVICIIEAMKLMNEIEADQSGTIAEILAEDGKPVSLDTPLVVIVP Homology
BLAST of Cmc07g0195181.1 vs. NCBI nr
Match: XP_008451672.1 (PREDICTED: biotin carboxyl carrier protein of acetyl-CoA carboxylase 2, chloroplastic [Cucumis melo] >KAA0057646.1 biotin carboxyl carrier protein of acetyl-CoA carboxylase 2 [Cucumis melo var. makuwa] >TYK19531.1 biotin carboxyl carrier protein of acetyl-CoA carboxylase 2 [Cucumis melo var. makuwa]) HSP 1 Score: 559.7 bits (1441), Expect = 1.5e-155 Identity = 290/290 (100.00%), Postives = 290/290 (100.00%), Query Frame = 0
BLAST of Cmc07g0195181.1 vs. NCBI nr
Match: XP_004137199.1 (biotin carboxyl carrier protein of acetyl-CoA carboxylase 2, chloroplastic [Cucumis sativus] >KGN53635.1 hypothetical protein Csa_014553 [Cucumis sativus]) HSP 1 Score: 483.8 bits (1244), Expect = 1.0e-132 Identity = 254/290 (87.59%), Postives = 264/290 (91.03%), Query Frame = 0
BLAST of Cmc07g0195181.1 vs. NCBI nr
Match: XP_038880218.1 (biotin carboxyl carrier protein of acetyl-CoA carboxylase 2, chloroplastic-like [Benincasa hispida]) HSP 1 Score: 435.3 bits (1118), Expect = 4.2e-118 Identity = 236/293 (80.55%), Postives = 251/293 (85.67%), Query Frame = 0
BLAST of Cmc07g0195181.1 vs. NCBI nr
Match: XP_022144442.1 (biotin carboxyl carrier protein of acetyl-CoA carboxylase, chloroplastic-like [Momordica charantia]) HSP 1 Score: 407.9 bits (1047), Expect = 7.2e-110 Identity = 218/292 (74.66%), Postives = 241/292 (82.53%), Query Frame = 0
BLAST of Cmc07g0195181.1 vs. NCBI nr
Match: KAG7036795.1 (Biotin carboxyl carrier protein of acetyl-CoA carboxylase 2, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 384.4 bits (986), Expect = 8.6e-103 Identity = 215/296 (72.64%), Postives = 238/296 (80.41%), Query Frame = 0
BLAST of Cmc07g0195181.1 vs. ExPASy Swiss-Prot
Match: Q42533 (Biotin carboxyl carrier protein of acetyl-CoA carboxylase 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=BCCP1 PE=1 SV=2) HSP 1 Score: 200.7 bits (509), Expect = 2.3e-50 Identity = 126/224 (56.25%), Postives = 158/224 (70.54%), Query Frame = 0
BLAST of Cmc07g0195181.1 vs. ExPASy Swiss-Prot
Match: Q9LLC1 (Biotin carboxyl carrier protein of acetyl-CoA carboxylase 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=BCCP2 PE=1 SV=1) HSP 1 Score: 198.4 bits (503), Expect = 1.1e-49 Identity = 127/239 (53.14%), Postives = 155/239 (64.85%), Query Frame = 0
BLAST of Cmc07g0195181.1 vs. ExPASy Swiss-Prot
Match: Q42783 (Biotin carboxyl carrier protein of acetyl-CoA carboxylase, chloroplastic OS=Glycine max OX=3847 GN=ACCB-1 PE=1 SV=1) HSP 1 Score: 191.8 bits (486), Expect = 1.1e-47 Identity = 126/224 (56.25%), Postives = 150/224 (66.96%), Query Frame = 0
BLAST of Cmc07g0195181.1 vs. ExPASy Swiss-Prot
Match: Q06881 (Biotin carboxyl carrier protein of acetyl-CoA carboxylase OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 GN=accB PE=1 SV=2) HSP 1 Score: 98.6 bits (244), Expect = 1.2e-19 Identity = 72/180 (40.00%), Postives = 102/180 (56.67%), Query Frame = 0
BLAST of Cmc07g0195181.1 vs. ExPASy Swiss-Prot
Match: P37799 (Biotin carboxyl carrier protein of acetyl-CoA carboxylase OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) OX=208964 GN=accB PE=3 SV=1) HSP 1 Score: 95.1 bits (235), Expect = 1.4e-18 Identity = 69/166 (41.57%), Postives = 97/166 (58.43%), Query Frame = 0
BLAST of Cmc07g0195181.1 vs. ExPASy TrEMBL
Match: A0A5D3D7I3 (Biotin carboxyl carrier protein of acetyl-CoA carboxylase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold416G00230 PE=4 SV=1) HSP 1 Score: 559.7 bits (1441), Expect = 7.2e-156 Identity = 290/290 (100.00%), Postives = 290/290 (100.00%), Query Frame = 0
BLAST of Cmc07g0195181.1 vs. ExPASy TrEMBL
Match: A0A1S3BS42 (Biotin carboxyl carrier protein of acetyl-CoA carboxylase OS=Cucumis melo OX=3656 GN=LOC103492902 PE=4 SV=1) HSP 1 Score: 559.7 bits (1441), Expect = 7.2e-156 Identity = 290/290 (100.00%), Postives = 290/290 (100.00%), Query Frame = 0
BLAST of Cmc07g0195181.1 vs. ExPASy TrEMBL
Match: A0A0A0KVK6 (Biotin carboxyl carrier protein of acetyl-CoA carboxylase OS=Cucumis sativus OX=3659 GN=Csa_4G092990 PE=4 SV=1) HSP 1 Score: 483.8 bits (1244), Expect = 5.0e-133 Identity = 254/290 (87.59%), Postives = 264/290 (91.03%), Query Frame = 0
BLAST of Cmc07g0195181.1 vs. ExPASy TrEMBL
Match: A0A6J1CTP9 (Biotin carboxyl carrier protein of acetyl-CoA carboxylase OS=Momordica charantia OX=3673 GN=LOC111014125 PE=4 SV=1) HSP 1 Score: 407.9 bits (1047), Expect = 3.5e-110 Identity = 218/292 (74.66%), Postives = 241/292 (82.53%), Query Frame = 0
BLAST of Cmc07g0195181.1 vs. ExPASy TrEMBL
Match: A0A6J1KGA1 (Biotin carboxyl carrier protein of acetyl-CoA carboxylase OS=Cucurbita maxima OX=3661 GN=LOC111492956 PE=4 SV=1) HSP 1 Score: 384.0 bits (985), Expect = 5.4e-103 Identity = 215/296 (72.64%), Postives = 236/296 (79.73%), Query Frame = 0
BLAST of Cmc07g0195181.1 vs. TAIR 10
Match: AT5G16390.1 (chloroplastic acetylcoenzyme A carboxylase 1 ) HSP 1 Score: 200.7 bits (509), Expect = 1.6e-51 Identity = 126/224 (56.25%), Postives = 158/224 (70.54%), Query Frame = 0
BLAST of Cmc07g0195181.1 vs. TAIR 10
Match: AT5G15530.1 (biotin carboxyl carrier protein 2 ) HSP 1 Score: 198.4 bits (503), Expect = 8.1e-51 Identity = 127/239 (53.14%), Postives = 155/239 (64.85%), Query Frame = 0
BLAST of Cmc07g0195181.1 vs. TAIR 10
Match: AT5G16390.2 (chloroplastic acetylcoenzyme A carboxylase 1 ) HSP 1 Score: 161.4 bits (407), Expect = 1.1e-39 Identity = 107/195 (54.87%), Postives = 133/195 (68.21%), Query Frame = 0
BLAST of Cmc07g0195181.1 vs. TAIR 10
Match: AT3G15690.2 (Single hybrid motif superfamily protein ) HSP 1 Score: 47.4 bits (111), Expect = 2.3e-05 Identity = 55/176 (31.25%), Postives = 87/176 (49.43%), Query Frame = 0
BLAST of Cmc07g0195181.1 vs. TAIR 10
Match: AT1G52670.1 (Single hybrid motif superfamily protein ) HSP 1 Score: 44.7 bits (104), Expect = 1.5e-04 Identity = 54/195 (27.69%), Postives = 86/195 (44.10%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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