Cmc07g0192041.1 (mRNA) Melon (Charmono) v1.1

Overview


Name	Cmc07g0192041.1
Type	mRNA
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Threonine synthase
Location	CMiso1.1chr07: 12431033 .. 12433610 (+)
Sequence length	1622
RNA-Seq Expression	Cmc07g0192041.1
Synteny	Cmc07g0192041.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTTGGTAACATTTATGCATTTTACAAAGGTTTCAAGATGTGTCAAGAACTTGGCCTTGTTGATAAAATTCCAAGGCTTGTTTGTGCTGAAGCAGCCAATGCAAATCCTTTGTATTTACATTACAAATCTGGTTGGAAAGATTTTAAGGCTGTGAAAGCAAGTTCAACTTTTGCTTCCGCCATTCAGATTGGAGATCCAATTTCTATAGACCGAGCTGTTTACACATTGCAGAATTCAAATGGCATTATTGAGGAAGCAACCGAGGAGGAACTTATGGACGCAATGGCACAAGCTGTCCTGAGCTAGCATCATTGTGATGCTCTCTGCTTACATTGCTTACTTGGTCTTTCAACTTTGGACTCATCGACAACTATTTGAAGCTGAGGTACGATGACTGCTCCTTTGAATATTTAATTTTATCTTTAATAGAGCTAATGCATGTTTATTTCAGCTACATTAGTTATAAAGTTTTGTTCGATGATTACACGATTTTTTAGAATTTAAATTCGCAATGGAATTGATTTTTTTTAAGTTATAAATTATAAAAATAATCTCTATTTTTACAGTTAATCTTCTTTTTTAAAAAAATAACAAATCTATCTTTAATCTTCTACAAAATTTGAAAATATATTCAATTTTTTTAAATGTAAATTATAATTATTATATAAGTTCACGACATAAAAATTAAGTTCAAACAAAGTAAAAGTTTAATTAGAAGCAACGTTTTTTAATATTTAAAAATATAGAGATGAAAGTAGAATAAATTGAATTTGAAGTACTATAAAGTAGAATAGTAACGAAGATGTCGATGAATACTACTCCACCTCCATTCTTTGCATCTACTATTGCTTCTCCAACTCCCCACCCTTACATCTAGGGAGGTCAGGTAATTATAATTTTCTATTGTCCCTATGAAATTTTATGGAGTTTGATATTTTCCAAAGAGGACAAGATAATAATGTTCCTATTTTCTTAATTTTATGTTACATTTTTCAGCATCTTTTGATGTTACCGTATGGGACTCCAGTACCTTATCCATCTATATATCATTGTGGTAATCACCCTTTTATATTATAGGCTAGTGGATTTTATTTATATTCAAATCAATGAATCTTTTTTTCTTCATGGTTTCATCTTAATATCATTTGCTCTTTACCTGACCATTCCTTCTTAAATACCCACAAAATCATTAGACCAAAATAGAAGGATTAAGTTAGTCTTTGATATAATTGTTCTTTTTTTTTTCTTTTGTAGACTTCTAATCAATGTTGAATGTGAAGGGAAATCCCTTGATGGAAAAGAAAGGGTAAAAAAATCCAAGGGCATGTTAGGAAATACTGCTTCAGCTGGCGGTAGGAAAAGTGGAAAGGTGGCTTCAAGTTCTAGAAATGATGGTGCTTCTCAAAGGTGTTTTAACTTGACACTTGGTGCAGGTTGTATTTTATTTTTAAATTAACTTCAAGTTATGCTACTTTTTGTTTTTTAAATTTTCAAATTTCTTTTTTGATTTTTTTGTACATTCGTAAAGAGTATATTACAAAAAGTTGATCGAACAACTCTTGCAGGGCCTGTTAATGAGCCCGGTTCTTCGAGTAGGGAACCTAATGCTAAAGCTTAAGCTCATAACGACCAAGTTTAAGCTAAAAGGATTGGACATGATACATAACATAACTGAGACTTGAGATTATTCATATTATCTTTGCATTTAGTTTTAACTTTTAAGAATATTTTCTTTTGAGAGAGTATGTCTTTTCTTTACATTTACTTTTGGGATTGATGCATTTATTTCACAGCAATGAGCAGTGGTTTATTAATTGATGATGATGTTAGATATTGATTCTGCTCGTTGTTTTGTAGCTATTTACCTGAGGCATACTGGAAATATTTTTCATGTACCAGCTAACAGGATGCCATATTTATTATTTATTCACAAAGTTCATTTGTTGTTATAGTTTGTTGCCATATTTTTCAGTCAGGTTATGGCAAGGAGGAAATACCGCTGGCCCTGGTGTGGTGTTTTTTCTTTTAAAGATTTTTTTAAAAAATCTTTGTGATATGTGGTTTGCTTGCTTTGAACGACCTTTTTTTTCTTAAATAAGTTGGTTTCTGTTTTTTACATTTTTGTTTTGTTTGTGATATGGGTACTTAGTTACGTAGGTTTCGGTTGCGAGGACTTGCAATTGTGTATTTGTATATTTTTTTGCTTCAGTAGAGGCAGCTTGACATTGAGTTTAAGGAATATGCTGATGAACAGAAACAGTGATGAACAGAGACAGAGGTAACAATATTCTTTAAAGTTAATATATTGTACGACATTACCAAATTCTCTAACGTACGTTTAGCTTTGTTTTGGTATTGTTAATAGAATGATTGAAGTTATATCGGGTTGAAAGCTGAACGATTGTGTAGATAGTCAGGTGATCGTTGAAGGTTGAAGATTGAGAAGACGTTTAGAATTTTTCTTATTTACGTCTTGTATTAGGATCTTTTTTCATGTATTGTTGTAGAATATATAAACACAATATTAAGTTTTCAGTTTGTGTATACAAATGTAAAAGATAAATATTATAGCTTCTA

mRNA sequence

TCTTGGTAACATTTATGCATTTTACAAAGGTTTCAAGATGTGTCAAGAACTTGGCCTTGTTGATAAAATTCCAAGGCTTGTTTGTGCTGAAGCAGCCAATGCAAATCCTTTGTATTTACATTACAAATCTGGTTGGAAAGATTTTAAGGCTGTGAAAGCAAGTTCAACTTTTGCTTCCGCCATTCAGATTGGAGATCCAATTTCTATAGACCGAGCTGTTTACACATTGCAGAATTCAAATGGCATTATTGAGGAAGCAACCGAGGAGGAACTTATGGACGCAATGGCACAAGCTGTCCTGAGCTAGCATCATTGTGATGCTCTCTGCTTACATTGCTTACTTGGTCTTTCAACTTTGGACTCATCGACAACTATTTGAAGCTGAGACTTCTAATCAATGTTGAATGTGAAGGGAAATCCCTTGATGGAAAAGAAAGGGTAAAAAAATCCAAGGGCATGTTAGGAAATACTGCTTCAGCTGGCGGTAGGAAAAGTGGAAAGGTGGCTTCAAGTTCTAGAAATGATGGTGCTTCTCAAAGGTGTTTTAACTTGACACTTGGTGCAGGTTGTATTTTATTTTTAAATTAACTTCAAGTTATGCTACTTTTTGTTTTTTAAATTTTCAAATTTCTTTTTTGATTTTTTTGTACATTCGTAAAGAGTATATTACAAAAAGTTGATCGAACAACTCTTGCAGGGCCTGTTAATGAGCCCGGTTCTTCGAGTAGGGAACCTAATGCTAAAGCTTAAGCTCATAACGACCAAGTTTAAGCTAAAAGGATTGGACATGATACATAACATAACTGAGACTTGAGATTATTCATATTATCTTTGCATTTAGTTTTAACTTTTAAGAATATTTTCTTTTGAGAGAGTATGTCTTTTCTTTACATTTACTTTTGGGATTGATGCATTTATTTCACAGCAATGAGCAGTGGTTTATTAATTGATGATGATGTTAGATATTGATTCTGCTCGTTGTTTTGTAGCTATTTACCTGAGGCATACTGGAAATATTTTTCATGTACCAGCTAACAGGATGCCATATTTATTATTTATTCACAAAGTTCATTTGTTGTTATAGTTTGTTGCCATATTTTTCAGTCAGGTTATGGCAAGGAGGAAATACCGCTGGCCCTGGTGTGGTGTTTTTTCTTTTAAAGATTTTTTTAAAAAATCTTTGTGATATGTGGTTTGCTTGCTTTGAACGACCTTTTTTTTCTTAAATAAGTTGGTTTCTGTTTTTTACATTTTTGTTTTGTTTGTGATATGGGTACTTAGTTACGTAGGTTTCGGTTGCGAGGACTTGCAATTGTGTATTTGTATATTTTTTTGCTTCAGTAGAGGCAGCTTGACATTGAGTTTAAGGAATATGCTGATGAACAGAAACAGTGATGAACAGAGACAGAGAATGATTGAAGTTATATCGGGTTGAAAGCTGAACGATTGTGTAGATAGTCAGGTGATCGTTGAAGGTTGAAGATTGAGAAGACGTTTAGAATTTTTCTTATTTACGTCTTGTATTAGGATCTTTTTTCATGTATTGTTGTAGAATATATAAACACAATATTAAGTTTTCAGTTTGTGTATACAAATGTAAAAGATAAATATTATAGCTTCTA

Coding sequence (CDS)

ATGTGTCAAGAACTTGGCCTTGTTGATAAAATTCCAAGGCTTGTTTGTGCTGAAGCAGCCAATGCAAATCCTTTGTATTTACATTACAAATCTGGTTGGAAAGATTTTAAGGCTGTGAAAGCAAGTTCAACTTTTGCTTCCGCCATTCAGATTGGAGATCCAATTTCTATAGACCGAGCTGTTTACACATTGCAGAATTCAAATGGCATTATTGAGGAAGCAACCGAGGAGGAACTTATGGACGCAATGGCACAAGCTGTCCTGAGCTAG

Protein sequence

MCQELGLVDKIPRLVCAEAANANPLYLHYKSGWKDFKAVKASSTFASAIQIGDPISIDRAVYTLQNSNGIIEEATEEELMDAMAQAVLS

Homology

[Close]

BLAST of Cmc07g0192041.1 vs. NCBI nr
Match: KAA0046129.1 (Pyridoxal-5'-phosphate-dependent enzyme family protein [Cucumis melo var. makuwa])

HSP 1 Score: 177.6 bits (449), Expect = 4.9e-41
Identity = 89/89 (100.00%), Postives = 89/89 (100.00%), Query Frame = 0


Query: 1   MCQELGLVDKIPRLVCAEAANANPLYLHYKSGWKDFKAVKASSTFASAIQIGDPISIDRA 60
           MCQELGLVDKIPRLVCAEAANANPLYLHYKSGWKDFKAVKASSTFASAIQIGDPISIDRA
Sbjct: 289 MCQELGLVDKIPRLVCAEAANANPLYLHYKSGWKDFKAVKASSTFASAIQIGDPISIDRA 348

Query: 61  VYTLQNSNGIIEEATEEELMDAMAQAVLS 90
           VYTLQNSNGIIEEATEEELMDAMAQAVLS
Sbjct: 349 VYTLQNSNGIIEEATEEELMDAMAQAVLS 377

[Close]

BLAST of Cmc07g0192041.1 vs. NCBI nr
Match: TYK27135.1 (threonine synthase 1 [Cucumis melo var. makuwa])

HSP 1 Score: 169.9 bits (429), Expect = 1.0e-38
Identity = 82/89 (92.13%), Postives = 87/89 (97.75%), Query Frame = 0


Query: 1   MCQELGLVDKIPRLVCAEAANANPLYLHYKSGWKDFKAVKASSTFASAIQIGDPISIDRA 60
           MCQ+LGLVDKIPRLVCA+AANANPLYLHYKSGWKDFKAVKASSTFASAIQIGDP+SIDRA
Sbjct: 311 MCQQLGLVDKIPRLVCAQAANANPLYLHYKSGWKDFKAVKASSTFASAIQIGDPVSIDRA 370

Query: 61  VYTLQNSNGIIEEATEEELMDAMAQAVLS 90
           +Y LQNSNGI+EEATEEELMDAMAQAV S
Sbjct: 371 IYALQNSNGIVEEATEEELMDAMAQAVQS 399

[Close]

BLAST of Cmc07g0192041.1 vs. NCBI nr
Match: KAA0058933.1 (threonine synthase 1 [Cucumis melo var. makuwa] >TYK23699.1 threonine synthase 1 [Cucumis melo var. makuwa])

HSP 1 Score: 169.9 bits (429), Expect = 1.0e-38
Identity = 82/89 (92.13%), Postives = 87/89 (97.75%), Query Frame = 0


Query: 1   MCQELGLVDKIPRLVCAEAANANPLYLHYKSGWKDFKAVKASSTFASAIQIGDPISIDRA 60
           MCQ+LGLVDKIPRLVCA+AANANPLYLHYKSGWKDFKAVKASSTFASAIQIGDP+SIDRA
Sbjct: 122 MCQQLGLVDKIPRLVCAQAANANPLYLHYKSGWKDFKAVKASSTFASAIQIGDPVSIDRA 181

Query: 61  VYTLQNSNGIIEEATEEELMDAMAQAVLS 90
           +Y LQNSNGI+EEATEEELMDAMAQAV S
Sbjct: 182 IYALQNSNGIVEEATEEELMDAMAQAVQS 210

[Close]

BLAST of Cmc07g0192041.1 vs. NCBI nr
Match: KAA0054405.1 (Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily [Cucumis melo var. makuwa] >TYJ96832.1 Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily [Cucumis melo var. makuwa])

HSP 1 Score: 169.5 bits (428), Expect = 1.3e-38
Identity = 82/89 (92.13%), Postives = 87/89 (97.75%), Query Frame = 0


Query: 1   MCQELGLVDKIPRLVCAEAANANPLYLHYKSGWKDFKAVKASSTFASAIQIGDPISIDRA 60
           MCQELGLVDKIPRLVCA+AANANPLYLHYKSGWKDFKAVKASSTFASA++IGDP+SIDRA
Sbjct: 391 MCQELGLVDKIPRLVCAQAANANPLYLHYKSGWKDFKAVKASSTFASAVKIGDPVSIDRA 450

Query: 61  VYTLQNSNGIIEEATEEELMDAMAQAVLS 90
           VY LQNSNGI+EEATEEELMDAMAQAV S
Sbjct: 451 VYALQNSNGIVEEATEEELMDAMAQAVQS 479

[Close]

BLAST of Cmc07g0192041.1 vs. NCBI nr
Match: TYJ98378.1 (threonine synthase 1 [Cucumis melo var. makuwa])

HSP 1 Score: 168.3 bits (425), Expect = 3.0e-38
Identity = 81/89 (91.01%), Postives = 87/89 (97.75%), Query Frame = 0


Query: 1   MCQELGLVDKIPRLVCAEAANANPLYLHYKSGWKDFKAVKASSTFASAIQIGDPISIDRA 60
           MCQ+LGLVDKIPRLVCA+AANANPLYLHYKSGWKDFKAVKASS+FASAIQIGDP+SIDRA
Sbjct: 102 MCQQLGLVDKIPRLVCAQAANANPLYLHYKSGWKDFKAVKASSSFASAIQIGDPVSIDRA 161

Query: 61  VYTLQNSNGIIEEATEEELMDAMAQAVLS 90
           +Y LQNSNGI+EEATEEELMDAMAQAV S
Sbjct: 162 IYALQNSNGIVEEATEEELMDAMAQAVQS 190

[Close]

BLAST of Cmc07g0192041.1 vs. ExPASy Swiss-Prot
Match: Q9MT28 (Threonine synthase, chloroplastic OS=Solanum tuberosum OX=4113 PE=2 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 1.5e-37
Identity = 74/86 (86.05%), Postives = 82/86 (95.35%), Query Frame = 0


Query: 1   MCQELGLVDKIPRLVCAEAANANPLYLHYKSGWKDFKAVKASSTFASAIQIGDPISIDRA 60
           MC+ELGLVD+IPRLVCA+AANANPLYLHYKSGWKDFK VKA++TFASAIQIGDP+SIDRA
Sbjct: 342 MCKELGLVDRIPRLVCAQAANANPLYLHYKSGWKDFKPVKANTTFASAIQIGDPVSIDRA 401

Query: 61  VYTLQNSNGIIEEATEEELMDAMAQA 87
           V+ LQ  NGI+EEATEEELMDAMAQA
Sbjct: 402 VFALQQCNGIVEEATEEELMDAMAQA 427

[Close]

BLAST of Cmc07g0192041.1 vs. ExPASy Swiss-Prot
Match: Q9S7B5 (Threonine synthase 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TS1 PE=1 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 4.5e-37
Identity = 73/86 (84.88%), Postives = 81/86 (94.19%), Query Frame = 0


Query: 1   MCQELGLVDKIPRLVCAEAANANPLYLHYKSGWKDFKAVKASSTFASAIQIGDPISIDRA 60
           MCQELGLVD+IPR+VCA+AANANPLYLHYKSGWKDFK + AS+TFASAIQIGDP+SIDRA
Sbjct: 349 MCQELGLVDRIPRMVCAQAANANPLYLHYKSGWKDFKPMTASTTFASAIQIGDPVSIDRA 408

Query: 61  VYTLQNSNGIIEEATEEELMDAMAQA 87
           VY L+  NGI+EEATEEELMDAMAQA
Sbjct: 409 VYALKKCNGIVEEATEEELMDAMAQA 434

[Close]

BLAST of Cmc07g0192041.1 vs. ExPASy Swiss-Prot
Match: Q9SSP5 (Threonine synthase 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TS2 PE=1 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 3.9e-33
Identity = 70/87 (80.46%), Postives = 80/87 (91.95%), Query Frame = 0


Query: 1   MCQELGLVDKIPRLVCAEAANANPLYLHYKSGWK-DFKAVKASSTFASAIQIGDPISIDR 60
           MC+ELGLVD+IPRLVCA+AANANPLYLHYKSG+K DF  +KA++TFASAIQIGDP+SIDR
Sbjct: 340 MCKELGLVDRIPRLVCAQAANANPLYLHYKSGFKEDFNPLKANTTFASAIQIGDPVSIDR 399

Query: 61  AVYTLQNSNGIIEEATEEELMDAMAQA 87
           AVY L+ SNGI+EEATEEELMDA A A
Sbjct: 400 AVYALKKSNGIVEEATEEELMDATALA 426

[Close]

BLAST of Cmc07g0192041.1 vs. ExPASy Swiss-Prot
Match: Q58860 (Threonine synthase OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) OX=243232 GN=thrC PE=3 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 8.2e-07
Identity = 24/77 (31.17%), Postives = 47/77 (61.04%), Query Frame = 0


Query: 6   GLVDKIPRLVCAEAANANPLYLHYKSGWKDFKAVKASSTFASAIQIGDPISIDRAVYTLQ 65
           G++D++P++   +A  A P+   ++   KD    K   T A+AI+IG+P++  +A+  + 
Sbjct: 252 GIIDELPKMTGIQADGAKPIVEAFRKRAKDIIPYKNPETIATAIRIGNPVNAPKALDAIY 311

Query: 66  NSNGIIEEATEEELMDA 83
           +S G  E  T+EE+++A
Sbjct: 312 SSGGYAEAVTDEEIVEA 328

[Close]

BLAST of Cmc07g0192041.1 vs. ExPASy Swiss-Prot
Match: P66903 (Threonine synthase OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) OX=233413 GN=thrC PE=3 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 1.2e-05
Identity = 31/79 (39.24%), Postives = 44/79 (55.70%), Query Frame = 0


Query: 4   ELGLVDKIPRLVCAEAANANPLYLHYKSGWKDFKAVKASSTFASAIQIGDPISIDRAVYT 63
           +LGL+DK+PR++  +AA A PL L         + V    T A+AI+IG P S   AV  
Sbjct: 213 QLGLIDKLPRMLGTQAAGAAPLVLG--------EPVSHPETIATAIRIGSPASWTSAVEA 272

Query: 64  LQNSNGIIEEATEEELMDA 83
            Q S G    A++EE++ A
Sbjct: 273 QQQSKGRFLAASDEEILAA 283

[Close]

BLAST of Cmc07g0192041.1 vs. ExPASy TrEMBL
Match: A0A5A7TY05 (Pyridoxal-5'-phosphate-dependent enzyme family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold157G00650 PE=4 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 2.4e-41
Identity = 89/89 (100.00%), Postives = 89/89 (100.00%), Query Frame = 0


Query: 1   MCQELGLVDKIPRLVCAEAANANPLYLHYKSGWKDFKAVKASSTFASAIQIGDPISIDRA 60
           MCQELGLVDKIPRLVCAEAANANPLYLHYKSGWKDFKAVKASSTFASAIQIGDPISIDRA
Sbjct: 289 MCQELGLVDKIPRLVCAEAANANPLYLHYKSGWKDFKAVKASSTFASAIQIGDPISIDRA 348

Query: 61  VYTLQNSNGIIEEATEEELMDAMAQAVLS 90
           VYTLQNSNGIIEEATEEELMDAMAQAVLS
Sbjct: 349 VYTLQNSNGIIEEATEEELMDAMAQAVLS 377

[Close]

BLAST of Cmc07g0192041.1 vs. ExPASy TrEMBL
Match: A0A5A7USM5 (Threonine synthase 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1607G00030 PE=4 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 4.9e-39
Identity = 82/89 (92.13%), Postives = 87/89 (97.75%), Query Frame = 0


Query: 1   MCQELGLVDKIPRLVCAEAANANPLYLHYKSGWKDFKAVKASSTFASAIQIGDPISIDRA 60
           MCQ+LGLVDKIPRLVCA+AANANPLYLHYKSGWKDFKAVKASSTFASAIQIGDP+SIDRA
Sbjct: 122 MCQQLGLVDKIPRLVCAQAANANPLYLHYKSGWKDFKAVKASSTFASAIQIGDPVSIDRA 181

Query: 61  VYTLQNSNGIIEEATEEELMDAMAQAVLS 90
           +Y LQNSNGI+EEATEEELMDAMAQAV S
Sbjct: 182 IYALQNSNGIVEEATEEELMDAMAQAVQS 210

[Close]

BLAST of Cmc07g0192041.1 vs. ExPASy TrEMBL
Match: A0A5D3DUZ0 (Threonine synthase 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1920G00050 PE=4 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 4.9e-39
Identity = 82/89 (92.13%), Postives = 87/89 (97.75%), Query Frame = 0


Query: 1   MCQELGLVDKIPRLVCAEAANANPLYLHYKSGWKDFKAVKASSTFASAIQIGDPISIDRA 60
           MCQ+LGLVDKIPRLVCA+AANANPLYLHYKSGWKDFKAVKASSTFASAIQIGDP+SIDRA
Sbjct: 311 MCQQLGLVDKIPRLVCAQAANANPLYLHYKSGWKDFKAVKASSTFASAIQIGDPVSIDRA 370

Query: 61  VYTLQNSNGIIEEATEEELMDAMAQAVLS 90
           +Y LQNSNGI+EEATEEELMDAMAQAV S
Sbjct: 371 IYALQNSNGIVEEATEEELMDAMAQAVQS 399

[Close]

BLAST of Cmc07g0192041.1 vs. ExPASy TrEMBL
Match: A0A5A7UL45 (Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2750G00290 PE=4 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 6.4e-39
Identity = 82/89 (92.13%), Postives = 87/89 (97.75%), Query Frame = 0


Query: 1   MCQELGLVDKIPRLVCAEAANANPLYLHYKSGWKDFKAVKASSTFASAIQIGDPISIDRA 60
           MCQELGLVDKIPRLVCA+AANANPLYLHYKSGWKDFKAVKASSTFASA++IGDP+SIDRA
Sbjct: 391 MCQELGLVDKIPRLVCAQAANANPLYLHYKSGWKDFKAVKASSTFASAVKIGDPVSIDRA 450

Query: 61  VYTLQNSNGIIEEATEEELMDAMAQAVLS 90
           VY LQNSNGI+EEATEEELMDAMAQAV S
Sbjct: 451 VYALQNSNGIVEEATEEELMDAMAQAVQS 479

[Close]

BLAST of Cmc07g0192041.1 vs. ExPASy TrEMBL
Match: A0A5D3BJK3 (Threonine synthase 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold232G001170 PE=4 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 1.4e-38
Identity = 81/89 (91.01%), Postives = 87/89 (97.75%), Query Frame = 0


Query: 1   MCQELGLVDKIPRLVCAEAANANPLYLHYKSGWKDFKAVKASSTFASAIQIGDPISIDRA 60
           MCQ+LGLVDKIPRLVCA+AANANPLYLHYKSGWKDFKAVKASS+FASAIQIGDP+SIDRA
Sbjct: 102 MCQQLGLVDKIPRLVCAQAANANPLYLHYKSGWKDFKAVKASSSFASAIQIGDPVSIDRA 161

Query: 61  VYTLQNSNGIIEEATEEELMDAMAQAVLS 90
           +Y LQNSNGI+EEATEEELMDAMAQAV S
Sbjct: 162 IYALQNSNGIVEEATEEELMDAMAQAVQS 190

[Close]

BLAST of Cmc07g0192041.1 vs. TAIR 10
Match: AT4G29840.1 (Pyridoxal-5'-phosphate-dependent enzyme family protein )

HSP 1 Score: 154.8 bits (390), Expect = 3.2e-38
Identity = 73/86 (84.88%), Postives = 81/86 (94.19%), Query Frame = 0


Query: 1   MCQELGLVDKIPRLVCAEAANANPLYLHYKSGWKDFKAVKASSTFASAIQIGDPISIDRA 60
           MCQELGLVD+IPR+VCA+AANANPLYLHYKSGWKDFK + AS+TFASAIQIGDP+SIDRA
Sbjct: 349 MCQELGLVDRIPRMVCAQAANANPLYLHYKSGWKDFKPMTASTTFASAIQIGDPVSIDRA 408

Query: 61  VYTLQNSNGIIEEATEEELMDAMAQA 87
           VY L+  NGI+EEATEEELMDAMAQA
Sbjct: 409 VYALKKCNGIVEEATEEELMDAMAQA 434

[Close]

BLAST of Cmc07g0192041.1 vs. TAIR 10
Match: AT1G72810.1 (Pyridoxal-5'-phosphate-dependent enzyme family protein )

HSP 1 Score: 141.7 bits (356), Expect = 2.8e-34
Identity = 70/87 (80.46%), Postives = 80/87 (91.95%), Query Frame = 0


Query: 1   MCQELGLVDKIPRLVCAEAANANPLYLHYKSGWK-DFKAVKASSTFASAIQIGDPISIDR 60
           MC+ELGLVD+IPRLVCA+AANANPLYLHYKSG+K DF  +KA++TFASAIQIGDP+SIDR
Sbjct: 340 MCKELGLVDRIPRLVCAQAANANPLYLHYKSGFKEDFNPLKANTTFASAIQIGDPVSIDR 399

Query: 61  AVYTLQNSNGIIEEATEEELMDAMAQA 87
           AVY L+ SNGI+EEATEEELMDA A A
Sbjct: 400 AVYALKKSNGIVEEATEEELMDATALA 426

The following BLAST results are available for this feature:

BLAST of Cmc07g0192041.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0046129.1	4.9e-41	100.00	Pyridoxal-5'-phosphate-dependent enzyme family protein [Cucumis melo var. makuwa...	[more]
TYK27135.1	1.0e-38	92.13	threonine synthase 1 [Cucumis melo var. makuwa]	[more]
KAA0058933.1	1.0e-38	92.13	threonine synthase 1 [Cucumis melo var. makuwa] >TYK23699.1 threonine synthase 1...	[more]
KAA0054405.1	1.3e-38	92.13	Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily [Cucumis...	[more]
TYJ98378.1	3.0e-38	91.01	threonine synthase 1 [Cucumis melo var. makuwa]	[more]

BLAST of Cmc07g0192041.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9MT28	1.5e-37	86.05	Threonine synthase, chloroplastic OS=Solanum tuberosum OX=4113 PE=2 SV=1	[more]
Q9S7B5	4.5e-37	84.88	Threonine synthase 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TS1 PE=1 ...	[more]
Q9SSP5	3.9e-33	80.46	Threonine synthase 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TS2 PE=1 ...	[more]
Q58860	8.2e-07	31.17	Threonine synthase OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 266...	[more]
P66903	1.2e-05	39.24	Threonine synthase OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) OX=2...	[more]

BLAST of Cmc07g0192041.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TY05	2.4e-41	100.00	Pyridoxal-5'-phosphate-dependent enzyme family protein OS=Cucumis melo var. maku...	[more]
A0A5A7USM5	4.9e-39	92.13	Threonine synthase 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold160...	[more]
A0A5D3DUZ0	4.9e-39	92.13	Threonine synthase 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold192...	[more]
A0A5A7UL45	6.4e-39	92.13	Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily OS=Cucum...	[more]
A0A5D3BJK3	1.4e-38	91.01	Threonine synthase 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold232...	[more]

BLAST of Cmc07g0192041.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G29840.1	3.2e-38	84.88	Pyridoxal-5'-phosphate-dependent enzyme family protein	[more]
AT1G72810.1	2.8e-34	80.46	Pyridoxal-5'-phosphate-dependent enzyme family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036052	Tryptophan synthase beta subunit-like PLP-dependent enzyme	GENE3D	3.40.50.1100		coord: 1..88 e-value: 5.8E-21 score: 76.8
IPR036052	Tryptophan synthase beta subunit-like PLP-dependent enzyme	SUPERFAMILY	53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes	coord: 2..85
None	No IPR available	PANTHER	PTHR10314	CYSTATHIONINE BETA-SYNTHASE	coord: 5..86
None	No IPR available	PANTHER	PTHR10314:SF176	THREONINE SYNTHASE, CHLOROPLASTIC-LIKE ISOFORM X1	coord: 5..86

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cmc07g0192041	Cmc07g0192041	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc07g0192041.1-exon	Cmc07g0192041.1-exon-CMiso1.1chr07:12431033..12431418	exon
Cmc07g0192041.1-exon	Cmc07g0192041.1-exon-CMiso1.1chr07:12432288..12433311	exon
Cmc07g0192041.1-exon	Cmc07g0192041.1-exon-CMiso1.1chr07:12433399..12433610	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc07g0192041.1-five_prime_utr	Cmc07g0192041.1-five_prime_utr-CMiso1.1chr07:12431033..12431069	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc07g0192041.1-cds	Cmc07g0192041.1-cds-CMiso1.1chr07:12431070..12431339	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc07g0192041.1-three_prime_utr	Cmc07g0192041.1-three_prime_utr-CMiso1.1chr07:12431340..12431418	three_prime_UTR
Cmc07g0192041.1-three_prime_utr	Cmc07g0192041.1-three_prime_utr-CMiso1.1chr07:12432288..12433311	three_prime_UTR
Cmc07g0192041.1-three_prime_utr	Cmc07g0192041.1-three_prime_utr-CMiso1.1chr07:12433399..12433610	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cmc07g0192041.1	Cmc07g0192041.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0019344	cysteine biosynthetic process
biological_process	GO:0009088	threonine biosynthetic process
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0030170	pyridoxal phosphate binding
molecular_function	GO:0004795	threonine synthase activity