Cmc07g0188091.1 (mRNA) Melon (Charmono) v1.1

Overview


Name	Cmc07g0188091.1
Type	mRNA
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Beta-galactosidase
Location	CMiso1.1chr07: 6286326 .. 6286955 (+)
Sequence length	552
RNA-Seq Expression	Cmc07g0188091.1
Synteny	Cmc07g0188091.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTAATGAATTTGAAATCAAGGATTTGGGAAATCTGAAATATTTCCTTATAATGGAGGTGGCCAGATCTAAAGAAGGTATCTCCATGTCTCAGAGAAAATACACCCTTGATCTGCTAACCGAGATAGGTATGTTGGGATGTTGTCCCGCTGACACTCCTATTGAATTCAACTGTAAACTAGGAAACTCTGATGATCAAGTTCCAGTTGATAAAGAACAATATCAGTGCCTTGTGGGTAAATTGATTTACTTATCTCATATTCGTCGTGATATTTCCTTTGTTGTGAGTGTTGTTAGCCAGTTTATGTAGGCTCCCTATGAGGAACACATGGAAGCTATCAAAAGAATTATGAGATACTTAAAAACGACACCTGGTAAATGGTTGATGTTTAGAAAGACAAACAAAAAGAACATTGAGGCATATACTGACTCGGATTGGATAGGATATGTTGTTGACAGAAAGTCTACCTCCGGTTATTGTACCTTTGTTTGGGGCAATCTTGTAACTTGGAGGAGTAAGAAGCAAAGTGTTGTGGCCAGGAGCAGTGCTGAGGTCGAATATAGAGCTATGAGTTTGGGAATATGTGAGGAAATTTGGCTCCAGAAAGTCCTGTATGATCTTCATTAG

mRNA sequence

ATGGGTAATGAATTTGAAATCAAGGATTTGGGAAATCTGAAATATTTCCTTATAATGGAGGTGGCCAGATCTAAAGAAGGTATCTCCATGTCTCAGAGAAAATACACCCTTGATCTGCTAACCGAGATAGGTATGTTGGGATGTTGTCCCGCTGACACTCCTATTGAATTCAACTGTAAACTAGGAAACTCTGATGATCAAGTTCCAGTTGATAAAGAACAATATCAGTGCCTTGCTCCCTATGAGGAACACATGGAAGCTATCAAAAGAATTATGAGATACTTAAAAACGACACCTGGTAAATGGTTGATGTTTAGAAAGACAAACAAAAAGAACATTGAGGCATATACTGACTCGGATTGGATAGGATATGTTGTTGACAGAAAGTCTACCTCCGGTTATTGTACCTTTGTTTGGGGCAATCTTGTAACTTGGAGGAGTAAGAAGCAAAGTGTTGTGGCCAGGAGCAGTGCTGAGGTCGAATATAGAGCTATGAGTTTGGGAATATGTGAGGAAATTTGGCTCCAGAAAGTCCTGTATGATCTTCATTAG

Coding sequence (CDS)

ATGGGTAATGAATTTGAAATCAAGGATTTGGGAAATCTGAAATATTTCCTTATAATGGAGGTGGCCAGATCTAAAGAAGGTATCTCCATGTCTCAGAGAAAATACACCCTTGATCTGCTAACCGAGATAGGTATGTTGGGATGTTGTCCCGCTGACACTCCTATTGAATTCAACTGTAAACTAGGAAACTCTGATGATCAAGTTCCAGTTGATAAAGAACAATATCAGTGCCTTGCTCCCTATGAGGAACACATGGAAGCTATCAAAAGAATTATGAGATACTTAAAAACGACACCTGGTAAATGGTTGATGTTTAGAAAGACAAACAAAAAGAACATTGAGGCATATACTGACTCGGATTGGATAGGATATGTTGTTGACAGAAAGTCTACCTCCGGTTATTGTACCTTTGTTTGGGGCAATCTTGTAACTTGGAGGAGTAAGAAGCAAAGTGTTGTGGCCAGGAGCAGTGCTGAGGTCGAATATAGAGCTATGAGTTTGGGAATATGTGAGGAAATTTGGCTCCAGAAAGTCCTGTATGATCTTCATTAG

Protein sequence

MGNEFEIKDLGNLKYFLIMEVARSKEGISMSQRKYTLDLLTEIGMLGCCPADTPIEFNCKLGNSDDQVPVDKEQYQCLAPYEEHMEAIKRIMRYLKTTPGKWLMFRKTNKKNIEAYTDSDWIGYVVDRKSTSGYCTFVWGNLVTWRSKKQSVVARSSAEVEYRAMSLGICEEIWLQKVLYDLH

Homology

[Close]

BLAST of Cmc07g0188091.1 vs. NCBI nr
Match: TYK23097.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 326.2 bits (835), Expect = 1.8e-85
Identity = 164/209 (78.47%), Postives = 173/209 (82.78%), Query Frame = 0


Query: 1    MGNEFEIKDLGNLKYFLIMEVARSKEGISMSQRKYTLDLLTEIGMLGCCPADTPIEFNCK 60
            +GNEFEI+DLGNLKYFL MEVARSKEGIS+SQRKYTLDLLTE GMLGCC ADTPIEFNCK
Sbjct: 1461 IGNEFEIEDLGNLKYFLGMEVARSKEGISVSQRKYTLDLLTETGMLGCCLADTPIEFNCK 1520

Query: 61   LGNSDDQVPVDKEQYQCL--------------------------APYEEHMEAIKRIMRY 120
            LGNSDDQVPVDKEQYQ L                          APYEEHMEA+KRI+RY
Sbjct: 1521 LGNSDDQVPVDKEQYQRLVGKLIYLSHTHPDISFAVSAVSQFMQAPYEEHMEAVKRILRY 1580

Query: 121  LKTTPGKWLMFRKTNKKNIEAYTDSDWIGYVVDRKSTSGYCTFVWGNLVTWRSKKQSVVA 180
            LKTTPGK LMFRKT+KK IEAYTDSDW G VVDRKSTSGYCTFVWGNLVTWRSKKQ+VV+
Sbjct: 1581 LKTTPGKGLMFRKTDKKTIEAYTDSDWAGSVVDRKSTSGYCTFVWGNLVTWRSKKQNVVS 1640

Query: 181  RSSAEVEYRAMSLGICEEIWLQKVLYDLH 184
            RSSAE EY+AMSLGICEEIWLQKVL DLH
Sbjct: 1641 RSSAEAEYKAMSLGICEEIWLQKVLSDLH 1669

[Close]

BLAST of Cmc07g0188091.1 vs. NCBI nr
Match: KAA0025138.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 325.9 bits (834), Expect = 2.3e-85
Identity = 163/209 (77.99%), Postives = 173/209 (82.78%), Query Frame = 0


Query: 1    MGNEFEIKDLGNLKYFLIMEVARSKEGISMSQRKYTLDLLTEIGMLGCCPADTPIEFNCK 60
            +GNEFEI+DLGNLKYFL MEVARSKEGIS+SQRKYTLDLLTE GMLGCC ADTPIEFNCK
Sbjct: 1444 IGNEFEIEDLGNLKYFLGMEVARSKEGISVSQRKYTLDLLTETGMLGCCLADTPIEFNCK 1503

Query: 61   LGNSDDQVPVDKEQYQCL--------------------------APYEEHMEAIKRIMRY 120
            LGNSDDQVPVDKEQYQ L                          APYEEHMEA+KRI+RY
Sbjct: 1504 LGNSDDQVPVDKEQYQRLVGKLIYLSHTHPDISFAVSAVSQFMQAPYEEHMEAVKRILRY 1563

Query: 121  LKTTPGKWLMFRKTNKKNIEAYTDSDWIGYVVDRKSTSGYCTFVWGNLVTWRSKKQSVVA 180
            LKTTPGK LMFRKT+KK IEAYTDSDW G +VDRKSTSGYCTFVWGNLVTWRSKKQ+VV+
Sbjct: 1564 LKTTPGKGLMFRKTDKKTIEAYTDSDWAGSIVDRKSTSGYCTFVWGNLVTWRSKKQNVVS 1623

Query: 181  RSSAEVEYRAMSLGICEEIWLQKVLYDLH 184
            RSSAE EY+AMSLGICEEIWLQKVL DLH
Sbjct: 1624 RSSAEAEYKAMSLGICEEIWLQKVLSDLH 1652

[Close]

BLAST of Cmc07g0188091.1 vs. NCBI nr
Match: TYJ99952.1 (Beta-galactosidase [Cucumis melo var. makuwa] >TYK02395.1 Beta-galactosidase [Cucumis melo var. makuwa])

HSP 1 Score: 325.1 bits (832), Expect = 3.9e-85
Identity = 164/209 (78.47%), Postives = 171/209 (81.82%), Query Frame = 0


Query: 1    MGNEFEIKDLGNLKYFLIMEVARSKEGISMSQRKYTLDLLTEIGMLGCCPADTPIEFNCK 60
            MG+EFEIKDLGNLKYFL MEVARSKEGIS+SQRKYTLDLLTE GMLGC PADTPIEFNCK
Sbjct: 1309 MGDEFEIKDLGNLKYFLGMEVARSKEGISVSQRKYTLDLLTETGMLGCRPADTPIEFNCK 1368

Query: 61   LGNSDDQVPVDKEQYQCL--------------------------APYEEHMEAIKRIMRY 120
            LGNSDDQVPVDKEQYQ L                          APYE+HMEA+ RI+RY
Sbjct: 1369 LGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFAVSVVSQFMQAPYEKHMEAVNRILRY 1428

Query: 121  LKTTPGKWLMFRKTNKKNIEAYTDSDWIGYVVDRKSTSGYCTFVWGNLVTWRSKKQSVVA 180
            LK TPGK LMFRKTN+K IEAYTDSDW G V+DRKSTSGYCTFVWGNLVTWRSKKQSVVA
Sbjct: 1429 LKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTSGYCTFVWGNLVTWRSKKQSVVA 1488

Query: 181  RSSAEVEYRAMSLGICEEIWLQKVLYDLH 184
            RSSAE EYRAMSLGICEEIWLQKVL DLH
Sbjct: 1489 RSSAEAEYRAMSLGICEEIWLQKVLSDLH 1517

[Close]

BLAST of Cmc07g0188091.1 vs. NCBI nr
Match: TYK08054.1 (Beta-galactosidase [Cucumis melo var. makuwa])

HSP 1 Score: 325.1 bits (832), Expect = 3.9e-85
Identity = 164/209 (78.47%), Postives = 171/209 (81.82%), Query Frame = 0


Query: 1    MGNEFEIKDLGNLKYFLIMEVARSKEGISMSQRKYTLDLLTEIGMLGCCPADTPIEFNCK 60
            MG+EFEIKDLGNLKYFL MEVARSKEGIS+SQRKYTLDLLTE GMLGC PADTPIEFNCK
Sbjct: 1309 MGDEFEIKDLGNLKYFLGMEVARSKEGISVSQRKYTLDLLTETGMLGCRPADTPIEFNCK 1368

Query: 61   LGNSDDQVPVDKEQYQCL--------------------------APYEEHMEAIKRIMRY 120
            LGNSDDQVPVDKEQYQ L                          APYE+HMEA+ RI+RY
Sbjct: 1369 LGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFAVSVVSQFMQAPYEKHMEAVNRILRY 1428

Query: 121  LKTTPGKWLMFRKTNKKNIEAYTDSDWIGYVVDRKSTSGYCTFVWGNLVTWRSKKQSVVA 180
            LK TPGK LMFRKTN+K IEAYTDSDW G V+DRKSTSGYCTFVWGNLVTWRSKKQSVVA
Sbjct: 1429 LKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTSGYCTFVWGNLVTWRSKKQSVVA 1488

Query: 181  RSSAEVEYRAMSLGICEEIWLQKVLYDLH 184
            RSSAE EYRAMSLGICEEIWLQKVL DLH
Sbjct: 1489 RSSAEAEYRAMSLGICEEIWLQKVLSDLH 1517

[Close]

BLAST of Cmc07g0188091.1 vs. NCBI nr
Match: KAA0048203.1 (Beta-galactosidase [Cucumis melo var. makuwa])

HSP 1 Score: 325.1 bits (832), Expect = 3.9e-85
Identity = 164/209 (78.47%), Postives = 171/209 (81.82%), Query Frame = 0


Query: 1    MGNEFEIKDLGNLKYFLIMEVARSKEGISMSQRKYTLDLLTEIGMLGCCPADTPIEFNCK 60
            MG+EFEIKDLGNLKYFL MEVARSKEGIS+SQRKYTLDLLTE GMLGC PADTPIEFNCK
Sbjct: 1309 MGDEFEIKDLGNLKYFLGMEVARSKEGISVSQRKYTLDLLTETGMLGCRPADTPIEFNCK 1368

Query: 61   LGNSDDQVPVDKEQYQCL--------------------------APYEEHMEAIKRIMRY 120
            LGNSDDQVPVDKEQYQ L                          APYE+HMEA+ RI+RY
Sbjct: 1369 LGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFAVSVVSQFMQAPYEKHMEAVNRILRY 1428

Query: 121  LKTTPGKWLMFRKTNKKNIEAYTDSDWIGYVVDRKSTSGYCTFVWGNLVTWRSKKQSVVA 180
            LK TPGK LMFRKTN+K IEAYTDSDW G V+DRKSTSGYCTFVWGNLVTWRSKKQSVVA
Sbjct: 1429 LKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTSGYCTFVWGNLVTWRSKKQSVVA 1488

Query: 181  RSSAEVEYRAMSLGICEEIWLQKVLYDLH 184
            RSSAE EYRAMSLGICEEIWLQKVL DLH
Sbjct: 1489 RSSAEAEYRAMSLGICEEIWLQKVLSDLH 1517

[Close]

BLAST of Cmc07g0188091.1 vs. ExPASy Swiss-Prot
Match: P92519 (Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 GN=AtMg00810 PE=4 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 8.6e-27
Identity = 67/199 (33.67%), Postives = 100/199 (50.25%), Query Frame = 0


Query: 1   MGNEFEIKDLGNLKYFLIMEVARSKEGISMSQRKYTLDLLTEIGMLGCCPADTPIEFNCK 60
           + + F +KDLG + YFL +++     G+ +SQ KY   +L   GML C P  TP+     
Sbjct: 27  LSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYAEQILNNAGMLDCKPMSTPLPLKLN 86

Query: 61  LGNSDDQVP--------VDKEQYQCLA-----------------PYEEHMEAIKRIMRYL 120
              S  + P        V   QY  L                  P     + +KR++RY+
Sbjct: 87  SSVSTAKYPDPSDFRSIVGALQYLTLTRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYV 146

Query: 121 KTTPGKWLMFRKTNKKNIEAYTDSDWIGYVVDRKSTSGYCTFVWGNLVTWRSKKQSVVAR 175
           K T    L   K +K N++A+ DSDW G    R+ST+G+CTF+  N+++W +K+Q  V+R
Sbjct: 147 KGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSR 206

[Close]

BLAST of Cmc07g0188091.1 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 4.3e-26
Identity = 72/208 (34.62%), Postives = 104/208 (50.00%), Query Frame = 0


Query: 1    MGNEFEIKDLGNLKYFLIMEVARSKEGISMSQRKYTLDLLTEIGMLGCCPADTPIEFNCK 60
            +   F +KD   L YFL +E  R   G+ +SQR+Y LDLL    M+   P  TP+  + K
Sbjct: 1171 LSQRFSVKDHEELHYFLGIEAKRVPTGLHLSQRRYILDLLARTNMITAKPVTTPMAPSPK 1230

Query: 61   LGNSDDQVPVDKEQY-------QCLA-------------------PYEEHMEAIKRIMRY 120
            L         D  +Y       Q LA                   P EEH++A+KRI+RY
Sbjct: 1231 LSLYSGTKLTDPTEYRGIVGSLQYLAFTRPDISYAVNRLSQFMHMPTEEHLQALKRILRY 1290

Query: 121  LKTTPGKWLMFRKTNKKNIEAYTDSDWIGYVVDRKSTSGYCTFVWGNLVTWRSKKQSVVA 180
            L  TP   +  +K N  ++ AY+D+DW G   D  ST+GY  ++  + ++W SKKQ  V 
Sbjct: 1291 LAGTPNHGIFLKKGNTLSLHAYSDADWAGDKDDYVSTNGYIVYLGHHPISWSSKKQKGVV 1350

Query: 181  RSSAEVEYRAMSLGICEEIWLQKVLYDL 183
            RSS E EYR+++    E  W+  +L +L
Sbjct: 1351 RSSTEAEYRSVANTSSEMQWICSLLTEL 1378

[Close]

BLAST of Cmc07g0188091.1 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 1.6e-25
Identity = 72/209 (34.45%), Postives = 110/209 (52.63%), Query Frame = 0


Query: 1    MGNEFEIKDLGNLKYFLIMEVARSKEGISMSQRKYTLDLLTEIGMLGCCPADTPIEFNCK 60
            +   F +K+  +L YFL +E  R  +G+ +SQR+YTLDLL    ML   P  TP+  + K
Sbjct: 1154 LSQRFSVKEHEDLHYFLGIEAKRVPQGLHLSQRRYTLDLLARTNMLTAKPVATPMATSPK 1213

Query: 61   LG-NSDDQVPVDKEQY-------QCLA-------------------PYEEHMEAIKRIMR 120
            L  +S  ++P D  +Y       Q LA                   P ++H  A+KR++R
Sbjct: 1214 LTLHSGTKLP-DPTEYRGIVGSLQYLAFTRPDLSYAVNRLSQYMHMPTDDHWNALKRVLR 1273

Query: 121  YLKTTPGKWLMFRKTNKKNIEAYTDSDWIGYVVDRKSTSGYCTFVWGNLVTWRSKKQSVV 180
            YL  TP   +  +K N  ++ AY+D+DW G   D  ST+GY  ++  + ++W SKKQ  V
Sbjct: 1274 YLAGTPDHGIFLKKGNTLSLHAYSDADWAGDTDDYVSTNGYIVYLGHHPISWSSKKQKGV 1333

Query: 181  ARSSAEVEYRAMSLGICEEIWLQKVLYDL 183
             RSS E EYR+++    E  W+  +L +L
Sbjct: 1334 VRSSTEAEYRSVANTSSELQWICSLLTEL 1361

[Close]

BLAST of Cmc07g0188091.1 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 96.3 bits (238), Expect = 3.9e-19
Identity = 64/209 (30.62%), Postives = 104/209 (49.76%), Query Frame = 0


Query: 4    EFEIKDLGNLKYFLIMEVARSKEGISMSQRKYTLDLLTEIGMLGCCPADTPI--EFNCKL 63
            +F + DL  +K+F+ + +   ++ I +SQ  Y   +L++  M  C    TP+  + N +L
Sbjct: 1111 KFRMTDLNEIKHFIGIRIEMQEDKIYLSQSAYVKKILSKFNMENCNAVSTPLPSKINYEL 1170

Query: 64   GNSDDQV-------------------PVDKEQYQCLAPY-----EEHMEAIKRIMRYLKT 123
             NSD+                     P        L+ Y      E  + +KR++RYLK 
Sbjct: 1171 LNSDEDCNTPCRSLIGCLMYIMLCTRPDLTTAVNILSRYSSKNNSELWQNLKRVLRYLKG 1230

Query: 124  TPGKWLMFRK--TNKKNIEAYTDSDWIGYVVDRKSTSGYCTFVWG-NLVTWRSKKQSVVA 183
            T    L+F+K    +  I  Y DSDW G  +DRKST+GY   ++  NL+ W +K+Q+ VA
Sbjct: 1231 TIDMKLIFKKNLAFENKIIGYVDSDWAGSEIDRKSTTGYLFKMFDFNLICWNTKRQNSVA 1290

[Close]

BLAST of Cmc07g0188091.1 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 2.1e-17
Identity = 63/217 (29.03%), Postives = 99/217 (45.62%), Query Frame = 0


Query: 1    MGNEFEIKDLGNLKYFLIMEVARSKEG--ISMSQRKYTLDLLTEIGMLGCCPADTPIEFN 60
            +   F++KDLG  +  L M++ R +    + +SQ KY   +L    M    P  TP+  +
Sbjct: 1029 LSKSFDMKDLGPAQQILGMKIVRERTSRKLWLSQEKYIERVLERFNMKNAKPVSTPLAGH 1088

Query: 61   CKLGNSDDQVPVDKEQYQCLAPY---------------------------------EEHM 120
             KL        V+++      PY                                 +EH 
Sbjct: 1089 LKLSKKMCPTTVEEKGNMAKVPYSSAVGSLMYAMVCTRPDIAHAVGVVSRFLENPGKEHW 1148

Query: 121  EAIKRIMRYLKTTPGKWLMFRKTNKKNIEAYTDSDWIGYVVDRKSTSGYCTFVWGNLVTW 180
            EA+K I+RYL+ T G  L F  ++   ++ YTD+D  G + +RKS++GY     G  ++W
Sbjct: 1149 EAVKWILRYLRGTTGDCLCFGGSD-PILKGYTDADMAGDIDNRKSSTGYLFTFSGGAISW 1208

Query: 181  RSKKQSVVARSSAEVEYRAMSLGICEEIWLQKVLYDL 183
            +SK Q  VA S+ E EY A +    E IWL++ L +L
Sbjct: 1209 QSKLQKCVALSTTEAEYIAATETGKEMIWLKRFLQEL 1244

[Close]

BLAST of Cmc07g0188091.1 vs. ExPASy TrEMBL
Match: A0A5D3DHC0 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold142G00790 PE=3 SV=1)

HSP 1 Score: 326.2 bits (835), Expect = 8.5e-86
Identity = 164/209 (78.47%), Postives = 173/209 (82.78%), Query Frame = 0


Query: 1    MGNEFEIKDLGNLKYFLIMEVARSKEGISMSQRKYTLDLLTEIGMLGCCPADTPIEFNCK 60
            +GNEFEI+DLGNLKYFL MEVARSKEGIS+SQRKYTLDLLTE GMLGCC ADTPIEFNCK
Sbjct: 1461 IGNEFEIEDLGNLKYFLGMEVARSKEGISVSQRKYTLDLLTETGMLGCCLADTPIEFNCK 1520

Query: 61   LGNSDDQVPVDKEQYQCL--------------------------APYEEHMEAIKRIMRY 120
            LGNSDDQVPVDKEQYQ L                          APYEEHMEA+KRI+RY
Sbjct: 1521 LGNSDDQVPVDKEQYQRLVGKLIYLSHTHPDISFAVSAVSQFMQAPYEEHMEAVKRILRY 1580

Query: 121  LKTTPGKWLMFRKTNKKNIEAYTDSDWIGYVVDRKSTSGYCTFVWGNLVTWRSKKQSVVA 180
            LKTTPGK LMFRKT+KK IEAYTDSDW G VVDRKSTSGYCTFVWGNLVTWRSKKQ+VV+
Sbjct: 1581 LKTTPGKGLMFRKTDKKTIEAYTDSDWAGSVVDRKSTSGYCTFVWGNLVTWRSKKQNVVS 1640

Query: 181  RSSAEVEYRAMSLGICEEIWLQKVLYDLH 184
            RSSAE EY+AMSLGICEEIWLQKVL DLH
Sbjct: 1641 RSSAEAEYKAMSLGICEEIWLQKVLSDLH 1669

[Close]

BLAST of Cmc07g0188091.1 vs. ExPASy TrEMBL
Match: A0A5A7SG80 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold124G00380 PE=3 SV=1)

HSP 1 Score: 325.9 bits (834), Expect = 1.1e-85
Identity = 163/209 (77.99%), Postives = 173/209 (82.78%), Query Frame = 0


Query: 1    MGNEFEIKDLGNLKYFLIMEVARSKEGISMSQRKYTLDLLTEIGMLGCCPADTPIEFNCK 60
            +GNEFEI+DLGNLKYFL MEVARSKEGIS+SQRKYTLDLLTE GMLGCC ADTPIEFNCK
Sbjct: 1444 IGNEFEIEDLGNLKYFLGMEVARSKEGISVSQRKYTLDLLTETGMLGCCLADTPIEFNCK 1503

Query: 61   LGNSDDQVPVDKEQYQCL--------------------------APYEEHMEAIKRIMRY 120
            LGNSDDQVPVDKEQYQ L                          APYEEHMEA+KRI+RY
Sbjct: 1504 LGNSDDQVPVDKEQYQRLVGKLIYLSHTHPDISFAVSAVSQFMQAPYEEHMEAVKRILRY 1563

Query: 121  LKTTPGKWLMFRKTNKKNIEAYTDSDWIGYVVDRKSTSGYCTFVWGNLVTWRSKKQSVVA 180
            LKTTPGK LMFRKT+KK IEAYTDSDW G +VDRKSTSGYCTFVWGNLVTWRSKKQ+VV+
Sbjct: 1564 LKTTPGKGLMFRKTDKKTIEAYTDSDWAGSIVDRKSTSGYCTFVWGNLVTWRSKKQNVVS 1623

Query: 181  RSSAEVEYRAMSLGICEEIWLQKVLYDLH 184
            RSSAE EY+AMSLGICEEIWLQKVL DLH
Sbjct: 1624 RSSAEAEYKAMSLGICEEIWLQKVLSDLH 1652

[Close]

BLAST of Cmc07g0188091.1 vs. ExPASy TrEMBL
Match: A0A5D3BJK7 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold155G001020 PE=4 SV=1)

HSP 1 Score: 325.1 bits (832), Expect = 1.9e-85
Identity = 164/209 (78.47%), Postives = 171/209 (81.82%), Query Frame = 0


Query: 1    MGNEFEIKDLGNLKYFLIMEVARSKEGISMSQRKYTLDLLTEIGMLGCCPADTPIEFNCK 60
            MG+EFEIKDLGNLKYFL MEVARSKEGIS+SQRKYTLDLLTE GMLGC PADTPIEFNCK
Sbjct: 1309 MGDEFEIKDLGNLKYFLGMEVARSKEGISVSQRKYTLDLLTETGMLGCRPADTPIEFNCK 1368

Query: 61   LGNSDDQVPVDKEQYQCL--------------------------APYEEHMEAIKRIMRY 120
            LGNSDDQVPVDKEQYQ L                          APYE+HMEA+ RI+RY
Sbjct: 1369 LGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFAVSVVSQFMQAPYEKHMEAVNRILRY 1428

Query: 121  LKTTPGKWLMFRKTNKKNIEAYTDSDWIGYVVDRKSTSGYCTFVWGNLVTWRSKKQSVVA 180
            LK TPGK LMFRKTN+K IEAYTDSDW G V+DRKSTSGYCTFVWGNLVTWRSKKQSVVA
Sbjct: 1429 LKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTSGYCTFVWGNLVTWRSKKQSVVA 1488

Query: 181  RSSAEVEYRAMSLGICEEIWLQKVLYDLH 184
            RSSAE EYRAMSLGICEEIWLQKVL DLH
Sbjct: 1489 RSSAEAEYRAMSLGICEEIWLQKVLSDLH 1517

[Close]

BLAST of Cmc07g0188091.1 vs. ExPASy TrEMBL
Match: A0A5D3C4T4 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold10G00040 PE=4 SV=1)

HSP 1 Score: 325.1 bits (832), Expect = 1.9e-85
Identity = 164/209 (78.47%), Postives = 171/209 (81.82%), Query Frame = 0


Query: 1    MGNEFEIKDLGNLKYFLIMEVARSKEGISMSQRKYTLDLLTEIGMLGCCPADTPIEFNCK 60
            MG+EFEIKDLGNLKYFL MEVARSKEGIS+SQRKYTLDLLTE GMLGC PADTPIEFNCK
Sbjct: 1309 MGDEFEIKDLGNLKYFLGMEVARSKEGISVSQRKYTLDLLTETGMLGCRPADTPIEFNCK 1368

Query: 61   LGNSDDQVPVDKEQYQCL--------------------------APYEEHMEAIKRIMRY 120
            LGNSDDQVPVDKEQYQ L                          APYE+HMEA+ RI+RY
Sbjct: 1369 LGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFAVSVVSQFMQAPYEKHMEAVNRILRY 1428

Query: 121  LKTTPGKWLMFRKTNKKNIEAYTDSDWIGYVVDRKSTSGYCTFVWGNLVTWRSKKQSVVA 180
            LK TPGK LMFRKTN+K IEAYTDSDW G V+DRKSTSGYCTFVWGNLVTWRSKKQSVVA
Sbjct: 1429 LKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTSGYCTFVWGNLVTWRSKKQSVVA 1488

Query: 181  RSSAEVEYRAMSLGICEEIWLQKVLYDLH 184
            RSSAE EYRAMSLGICEEIWLQKVL DLH
Sbjct: 1489 RSSAEAEYRAMSLGICEEIWLQKVLSDLH 1517

[Close]

BLAST of Cmc07g0188091.1 vs. ExPASy TrEMBL
Match: A0A5A7VLQ7 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold115G00690 PE=4 SV=1)

HSP 1 Score: 325.1 bits (832), Expect = 1.9e-85
Identity = 164/209 (78.47%), Postives = 171/209 (81.82%), Query Frame = 0


Query: 1    MGNEFEIKDLGNLKYFLIMEVARSKEGISMSQRKYTLDLLTEIGMLGCCPADTPIEFNCK 60
            MG+EFEIKDLGNLKYFL MEVARSKEGIS+SQRKYTLDLLTE GMLGC PADTPIEFNCK
Sbjct: 1309 MGDEFEIKDLGNLKYFLGMEVARSKEGISVSQRKYTLDLLTETGMLGCRPADTPIEFNCK 1368

Query: 61   LGNSDDQVPVDKEQYQCL--------------------------APYEEHMEAIKRIMRY 120
            LGNSDDQVPVDKEQYQ L                          APYE+HMEA+ RI+RY
Sbjct: 1369 LGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFAVSVVSQFMQAPYEKHMEAVNRILRY 1428

Query: 121  LKTTPGKWLMFRKTNKKNIEAYTDSDWIGYVVDRKSTSGYCTFVWGNLVTWRSKKQSVVA 180
            LK TPGK LMFRKTN+K IEAYTDSDW G V+DRKSTSGYCTFVWGNLVTWRSKKQSVVA
Sbjct: 1429 LKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTSGYCTFVWGNLVTWRSKKQSVVA 1488

Query: 181  RSSAEVEYRAMSLGICEEIWLQKVLYDLH 184
            RSSAE EYRAMSLGICEEIWLQKVL DLH
Sbjct: 1489 RSSAEAEYRAMSLGICEEIWLQKVLSDLH 1517

[Close]

BLAST of Cmc07g0188091.1 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 136.0 bits (341), Expect = 3.1e-32
Identity = 73/204 (35.78%), Postives = 114/204 (55.88%), Query Frame = 0


Query: 5   FEIKDLGNLKYFLIMEVARSKEGISMSQRKYTLDLLTEIGMLGCCPADTPIEFNCKLGNS 64
           F+++DLG LKYFL +E+ARS  GI++ QRKY LDLL E G+LGC P+  P++ +      
Sbjct: 308 FKLRDLGPLKYFLGLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAH 367

Query: 65  DDQVPVDKEQYQCL--------------------------APYEEHMEAIKRIMRYLKTT 124
                VD + Y+ L                          AP   H +A+ +I+ Y+K T
Sbjct: 368 SGGDFVDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGT 427

Query: 125 PGKWLMFRKTNKKNIEAYTDSDWIGYVVDRKSTSGYCTFVWGNLVTWRSKKQSVVARSSA 183
            G+ L +    +  ++ ++D+ +      R+ST+GYC F+  +L++W+SKKQ VV++SSA
Sbjct: 428 VGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSA 487

[Close]

BLAST of Cmc07g0188091.1 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 121.7 bits (304), Expect = 6.1e-28
Identity = 67/199 (33.67%), Postives = 100/199 (50.25%), Query Frame = 0


Query: 1   MGNEFEIKDLGNLKYFLIMEVARSKEGISMSQRKYTLDLLTEIGMLGCCPADTPIEFNCK 60
           + + F +KDLG + YFL +++     G+ +SQ KY   +L   GML C P  TP+     
Sbjct: 27  LSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYAEQILNNAGMLDCKPMSTPLPLKLN 86

Query: 61  LGNSDDQVP--------VDKEQYQCLA-----------------PYEEHMEAIKRIMRYL 120
              S  + P        V   QY  L                  P     + +KR++RY+
Sbjct: 87  SSVSTAKYPDPSDFRSIVGALQYLTLTRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYV 146

Query: 121 KTTPGKWLMFRKTNKKNIEAYTDSDWIGYVVDRKSTSGYCTFVWGNLVTWRSKKQSVVAR 175
           K T    L   K +K N++A+ DSDW G    R+ST+G+CTF+  N+++W +K+Q  V+R
Sbjct: 147 KGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSR 206

[Close]

BLAST of Cmc07g0188091.1 vs. TAIR 10
Match: ATMG00240.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 46.6 bits (109), Expect = 2.5e-05
Identity = 18/54 (33.33%), Postives = 34/54 (62.96%), Query Frame = 0


Query: 85  MEAIKRIMRYLKTTPGKWLMFRKTNKKNIEAYTDSDWIGYVVDRKSTSGYCTFV 139
           M+A+ +++ Y+K T G+ L +  T+   ++A+ DSDW      R+S +G+C+ V
Sbjct: 29  MQAVYKVLHYVKGTVGQGLFYSATSDLQLKAFADSDWASCPDTRRSVTGFCSLV 82

The following BLAST results are available for this feature:

BLAST of Cmc07g0188091.1 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK23097.1	1.8e-85	78.47	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
KAA0025138.1	2.3e-85	77.99	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
TYJ99952.1	3.9e-85	78.47	Beta-galactosidase [Cucumis melo var. makuwa] >TYK02395.1 Beta-galactosidase [Cu...	[more]
TYK08054.1	3.9e-85	78.47	Beta-galactosidase [Cucumis melo var. makuwa]	[more]
KAA0048203.1	3.9e-85	78.47	Beta-galactosidase [Cucumis melo var. makuwa]	[more]

BLAST of Cmc07g0188091.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P92519	8.6e-27	33.67	Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q94HW2	4.3e-26	34.62	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
Q9ZT94	1.6e-25	34.45	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
P04146	3.9e-19	30.62	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
P10978	2.1e-17	29.03	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]

BLAST of Cmc07g0188091.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DHC0	8.5e-86	78.47	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5A7SG80	1.1e-85	77.99	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5D3BJK7	1.9e-85	78.47	Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold155G0...	[more]
A0A5D3C4T4	1.9e-85	78.47	Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold10G00...	[more]
A0A5A7VLQ7	1.9e-85	78.47	Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold115G0...	[more]

BLAST of Cmc07g0188091.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	3.1e-32	35.78	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00810.1	6.1e-28	33.67	DNA/RNA polymerases superfamily protein	[more]
ATMG00240.1	2.5e-05	33.33	Gag-Pol-related retrotransposon family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR11439:SF337	SUBFAMILY NOT NAMED	coord: 4..175
None	No IPR available	PANTHER	PTHR11439	GAG-POL-RELATED RETROTRANSPOSON	coord: 4..175
None	No IPR available	CDD	cd09272	RNase_HI_RT_Ty1	coord: 114..182 e-value: 1.74432E-35 score: 119.11

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cmc07g0188091	Cmc07g0188091	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc07g0188091.1-exon	Cmc07g0188091.1-exon-CMiso1.1chr07:6286326..6286559	exon
Cmc07g0188091.1-exon	Cmc07g0188091.1-exon-CMiso1.1chr07:6286638..6286955	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc07g0188091.1-cds	Cmc07g0188091.1-cds-CMiso1.1chr07:6286326..6286559	CDS
Cmc07g0188091.1-cds	Cmc07g0188091.1-cds-CMiso1.1chr07:6286638..6286955	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cmc07g0188091.1	Cmc07g0188091.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0032456	endocytic recycling
biological_process	GO:0016310	phosphorylation
biological_process	GO:0015031	protein transport
cellular_component	GO:0005768	endosome
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0016301	kinase activity
molecular_function	GO:0003676	nucleic acid binding