Cmc06g0176691.1 (mRNA) Melon (Charmono) v1.1

Overview
NameCmc06g0176691.1
TypemRNA
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionUnknown protein
LocationCMiso1.1chr06: 33444211 .. 33445234 (+)
Sequence length1024
RNA-Seq ExpressionCmc06g0176691.1
SyntenyCmc06g0176691.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GCTTGAGCTATGAGCACAGTATTGGTCAAAGAACAAAATTGTCTAAAGGAAAGTAAAAGAAAATTTTCATGCGTTAATTTACCGGGAATCTCTGCTATTCGAGGCTGCGAAAAATTCCCAACACAAACAACTACAGCATCAAAAATGTCATAATCAACATCCCCATTTTCACATCGGAATTCAACCCTCCATTCCCCAAGCTTCTCCATACCAGCAAACACCACCTCAGTTCTAAATCTCACCAATTTACAAATCCCAAATTCATTAGCGAAATCTTCCAAATACTTTAGAACCTCCTTATGACTTGGAAATCGCCTCGGATCTCGATCCTCCCCTTCTCGAGGAACAAACGGGAAATCCCGGACCCCCATGAGTTCTCTTGGTATATTGGTTCGTAGAGATTTGTAGAGGCTGCTATGAATTCGGGTCCGATTCGGGTCGAGTCCAAGTGGGTCGGATTCAATTTCGGGCGAATATACCCAGACCCCTCCGATTTGATTATTCCGTTCGAATACCACAACTTGGTGGCCCTCCCGGGAAAGTTCCCGGGCCGAGATGAGGCCGGCGCCACCGGCGCCGATCACTGCCACGCGGCGGGAGTGTTGCATCGTCGTTGGTTGAGCTGAGGGGAGGAAACTCAGGGTACCAACTACCAATGACCAAAATTGACAAATAACATGGATTTGTTCTTTGCAGGGAATCTTGTGATTGAAAAAGGAAATCAATTTGTTTTTGTTGAAGTATGATAAAGATTTAATTTTTAAATGCTGTATTGCTGACTATTCCACGTGCAAGTTGTATTATATCATATTGTTGTTTTTAATCAATTCCTCCTTTTGAATAAAGAGAACACTTCTACAAATATGACCCTTCTATCTAATACAGGAGTGTTTATGGATTGAGTTAGGTTGAAGGGCTCTTTAAACCCAACCCAAATTGTGATTTATAATCAATCACCGAAATGGGCAATTCAATGTAGTGCTATAAAGTAAATATTATTTCAAATCAAGATCCAATATTTGTA

mRNA sequence

GCTTGAGCTATGAGCACAGTATTGGTCAAAGAACAAAATTGTCTAAAGGAAAGTAAAAGAAAATTTTCATGCGTTAATTTACCGGGAATCTCTGCTATTCGAGGCTGCGAAAAATTCCCAACACAAACAACTACAGCATCAAAAATGTCATAATCAACATCCCCATTTTCACATCGGAATTCAACCCTCCATTCCCCAAGCTTCTCCATACCAGCAAACACCACCTCAGTTCTAAATCTCACCAATTTACAAATCCCAAATTCATTAGCGAAATCTTCCAAATACTTTAGAACCTCCTTATGACTTGGAAATCGCCTCGGATCTCGATCCTCCCCTTCTCGAGGAACAAACGGGAAATCCCGGACCCCCATGAGTTCTCTTGGTATATTGGTTCGTAGAGATTTGTAGAGGCTGCTATGAATTCGGGTCCGATTCGGGTCGAGTCCAAGTGGGTCGGATTCAATTTCGGGCGAATATACCCAGACCCCTCCGATTTGATTATTCCGTTCGAATACCACAACTTGGTGGCCCTCCCGGGAAAGTTCCCGGGCCGAGATGAGGCCGGCGCCACCGGCGCCGATCACTGCCACGCGGCGGGAGTGTTGCATCGTCGTTGGTTGAGCTGAGGGGAGGAAACTCAGGGTACCAACTACCAATGACCAAAATTGACAAATAACATGGATTTGTTCTTTGCAGGGAATCTTGTGATTGAAAAAGGAAATCAATTTGTTTTTGTTGAAGTATGATAAAGATTTAATTTTTAAATGCTGTATTGCTGACTATTCCACGTGCAAGTTGTATTATATCATATTGTTGTTTTTAATCAATTCCTCCTTTTGAATAAAGAGAACACTTCTACAAATATGACCCTTCTATCTAATACAGGAGTGTTTATGGATTGAGTTAGGTTGAAGGGCTCTTTAAACCCAACCCAAATTGTGATTTATAATCAATCACCGAAATGGGCAATTCAATGTAGTGCTATAAAGTAAATATTATTTCAAATCAAGATCCAATATTTGTA

Coding sequence (CDS)

ATGAATTCGGGTCCGATTCGGGTCGAGTCCAAGTGGGTCGGATTCAATTTCGGGCGAATATACCCAGACCCCTCCGATTTGATTATTCCGTTCGAATACCACAACTTGGTGGCCCTCCCGGGAAAGTTCCCGGGCCGAGATGAGGCCGGCGCCACCGGCGCCGATCACTGCCACGCGGCGGGAGTGTTGCATCGTCGTTGGTTGAGCTGA

Protein sequence

MNSGPIRVESKWVGFNFGRIYPDPSDLIIPFEYHNLVALPGKFPGRDEAGATGADHCHAAGVLHRRWLS
Homology
The following BLAST results are available for this feature:
BLAST of Cmc06g0176691.1 vs.
Match NameE-valueIdentityDescription
BLAST of Cmc06g0176691.1 vs.
Match NameE-valueIdentityDescription
BLAST of Cmc06g0176691.1 vs.
Match NameE-valueIdentityDescription
BLAST of Cmc06g0176691.1 vs.
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cmc06g0176691Cmc06g0176691gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cmc06g0176691.1-exonCmc06g0176691.1-exon-CMiso1.1chr06:33444211..33445234exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cmc06g0176691.1-five_prime_utrCmc06g0176691.1-five_prime_utr-CMiso1.1chr06:33444211..33444626five_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cmc06g0176691.1-cdsCmc06g0176691.1-cds-CMiso1.1chr06:33444627..33444836CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cmc06g0176691.1-three_prime_utrCmc06g0176691.1-three_prime_utr-CMiso1.1chr06:33444837..33445234three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cmc06g0176691.1Cmc06g0176691.1-proteinpolypeptide